RchiOBHm_Chr5g0016531

Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
11359445 .. 11364196
4752 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29690

Sequence Viewer

Length: 1317 bp
ATGAAGTCTTACAGGCTATCTGAACTTACGCCAGCTGAGGTTCAGAACCTCAAGGCTCGTCCTAGGATTGACTTCTCTTCAATTTTAAGCACGGTCAACCCAATTGTAGATGATATTCGCAATAGAGGTGATGCTGCTGTTAAGGACTATACTGCAAAGTTTGACAAAGTTGAACTGGATAAGATAGTTGTAGAAGTATCTGAGCTTCCAGATCCAGAGCTTGATCCTTCTGTTAAAGAAGCATTTGACGTGGCATATGACAATATATATGCATTTCATTTTGCTCAGAAGTCAGCAGAGAGAACTGTTGAGAATATGAAGGGTGTCAAATGTAAACGAGTAGCAAGAAGTATTGGTTCTGTAGGTCTTTATGTTCCAGGAGGAACTGCAGTTTTACCTTCTACTGCTCTGATGCTTGCAGTTCCTGCTCAGATTGCTGGATCTAAAACAGTTGTACTTGCGACTCCCCCAAGTCGGGATGGCATTATATGCAAGGAAGTACTCTACTGTGCTAAGAAGGCTGGTGTAACTCACATCCTTAAAGCTGGTGGTGCTCAGGCGATATCTGCTATGGCTTGGGGTACAGAATCTTGCCCAAAGGTGGAAAAAGTTTTTGGCCCTGGAAACCAGTATGTCACAGCAGCGAAAATGATTCTCCAAAATAGTGAAGCCATGATCTCAATTGACATGCCAGCTGGCCCTTCCGAAGTTTTGGTCATTGCAGACAAGCATGCCAGTCCTGTCCATGTAGCTGCAGATTTACTTTCTCAGGCTGAGCATGGCCCTGATAGTCAAGTTGTTCTTGTTATTGCTGGGGATGGTGTTGATATTAAAGCTATAGAGGAGGAAGTTAAGAAGCAGTGTGACAGCCTACCAAGGGGAGATTTTGCTTCAAAAGCACTGAGCCACAGTTTCACAGTGATTGCTCGTGATATGGTTGAGGCTGTGTCTTTTTCAAACTTATATGCACCCGAGCATCTGATCATCAATGTCAATGATGCAGAAAAGTGGGAGAGTTTCATTGAGAATGCAGGTTCTGTGTTTTTAGGGCCCTGGACTCCAGAGAGTGTTGGAGATTATGCGAGTGGGACAAACCATGTCCTTCCAACATATGGCTATGCGCGGATGTATGGTGGTGTGTCTTTAGACTCCTTCCTAAAGTACATGACCGTGCAATCTCTAACAGAGGAAGGTCTGCAAAAGCTTGGCCCCTATGTAGCCACGATGGCTGAAGTTGAGGGATTAGATGCCCACAAGAGAGCCGTAACCCTTAGACTTAAAGATATTGAAGCTAGGCAGGTTCCAAATAGCAGGTGA

Protein Analysis

438

Amino Acids

47.24

Weight (kDa)

5.5

Isoelectric Point (pI)

40.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Histidinol_dh PF00815 20 - 426 3.1e-157 Histidinol dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1302
Acc36I ACCTGC 3 cut(s) 1022, 1288, 1302
AccB7I CCANNNNNTGG 1 cut(s) 1112
AccII CGCG 1 cut(s) 1123
AciI CCGC 1 cut(s) 1123
AclWI GGATC 3 cut(s) 206, 218, 448
AcuI CTGAAG 1 cut(s) 1251
AfaI GTAC 4 cut(s) 456, 501, 583, 1163
AfiI CCNNNNNNNGG 5 cut(s) 474, 475, 601, 877, 1112
AgsI TTSAA 5 cut(s) 81, 173, 894, 957, 1289
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 3 cut(s) 376, 619, 1052
AjuI GAANNNNNNNTTGG 2 cut(s) 597, 629
AluBI AGCT 9 cut(s) 35, 205, 220, 545, 695, 752, 836, 1204, 1292
AluI AGCT 9 cut(s) 35, 205, 220, 545, 695, 752, 836, 1204, 1292
Alw21I GWGCWC 1 cut(s) 556
AlwI GGATC 3 cut(s) 206, 218, 448
AlwNI CAGNNNCTG 2 cut(s) 425, 1037
Ama87I CYCGRG 1 cut(s) 971
AoxI GGCC 5 cut(s) 616, 697, 781, 1049, 1207
ApaI GGGCCC 1 cut(s) 1053
ApeKI GCWGC 3 cut(s) 134, 641, 752
ArsI GACNNNNNNTTYG 2 cut(s) 699, 731
AspA2I CCTAGG 1 cut(s) 62
AspLEI GCGC 1 cut(s) 1123
AspS9I GGNCC 6 cut(s) 617, 698, 782, 1049, 1050, 1208
AsuHPI GGTGA 1 cut(s) 140
AvaI CYCGRG 1 cut(s) 971
AvrII CCTAGG 1 cut(s) 62
BaeGI GKGCMC 1 cut(s) 1053
BanII GRGCYC 1 cut(s) 1053
BarI GAAGNNNNNNTAC 2 cut(s) 189, 221
BauI CACGAG 1 cut(s) 927
Bbv12I GWGCWC 1 cut(s) 556
BbvCI CCTCAGC 1 cut(s) 36
BbvI GCAGC 3 cut(s) 121, 653, 739
BccI CCATC 3 cut(s) 473, 812, 1219
BceAI ACGGC 1 cut(s) 1247
BciT130I CCWGG 3 cut(s) 378, 621, 1054
BclI TGATCA 1 cut(s) 981
BfaI CTAG 2 cut(s) 63, 1293
BfmI CTRYAG 4 cut(s) 360, 387, 753, 837
BfuAI ACCTGC 3 cut(s) 1022, 1288, 1302
BglI GCCNNNNNGGC 1 cut(s) 1226
BisI GCNGC 3 cut(s) 135, 642, 753
BlnI CCTAGG 1 cut(s) 62
BlpI GCTNAGC 1 cut(s) 774
BlsI GCNGC 3 cut(s) 136, 643, 754
BmcAI AGTACT 1 cut(s) 501
Bme1390I CCNGG 3 cut(s) 378, 621, 1054
BmeT110I CYCGRG 1 cut(s) 971
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 6 cut(s) 617, 698, 782, 1049, 1050, 1208
BmiI GGNNCC 3 cut(s) 1051, 1210, 1302
BmrFI CCNGG 3 cut(s) 378, 621, 1054
BmsI GCATC 5 cut(s) 121, 402, 985, 988, 1237
BpmI CTGGAG 1 cut(s) 1044
Bpu10I CCTNAGC 2 cut(s) 36, 555
Bpu1102I GCTNAGC 1 cut(s) 774
BpuEI CTTGAG 1 cut(s) 35
BsaJI CCNNGG 4 cut(s) 62, 619, 875, 1052
Bsc4I CCNNNNNNNGG 5 cut(s) 474, 475, 601, 877, 1112
Bse1I ACTGG 3 cut(s) 180, 628, 735
Bse3DI GCAATG 1 cut(s) 717
BseBI CCWGG 3 cut(s) 378, 621, 1054
BseDI CCNNGG 4 cut(s) 62, 619, 875, 1052
BseGI GGATG 4 cut(s) 484, 534, 823, 1131
BseLI CCNNNNNNNGG 5 cut(s) 474, 475, 601, 877, 1112
BseMI GCAATG 1 cut(s) 717
BseMII CTCAG 8 cut(s) 27, 192, 299, 443, 569, 765, 782, 893
BseNI ACTGG 3 cut(s) 180, 628, 735
BseRI GAGGAG 1 cut(s) 857
BseSI GKGCMC 1 cut(s) 1053
BseXI GCAGC 3 cut(s) 121, 653, 739
BseYI CCCAGC 1 cut(s) 812
Bsh1236I CGCG 1 cut(s) 1123
BshFI GGCC 5 cut(s) 618, 699, 783, 1051, 1209
BsiHKAI GWGCWC 1 cut(s) 556
BsiHKCI CYCGRG 1 cut(s) 971
BslFI GGGAC 1 cut(s) 1102
BslI CCNNNNNNNGG 5 cut(s) 474, 475, 601, 877, 1112
BsmFI GGGAC 1 cut(s) 1102
BsmI GAATGC 1 cut(s) 1033
BsnI GGCC 5 cut(s) 618, 699, 783, 1051, 1209
BsoBI CYCGRG 1 cut(s) 971
Bsp120I GGGCCC 1 cut(s) 1049
Bsp1286I GDGCHC 2 cut(s) 556, 1053
Bsp143I GATC 5 cut(s) 211, 223, 440, 675, 981
Bsp1720I GCTNAGC 1 cut(s) 774
BspACI CCGC 1 cut(s) 1123
BspANI GGCC 5 cut(s) 618, 699, 783, 1051, 1209
BspCNI CTCAG 8 cut(s) 28, 193, 298, 442, 568, 766, 781, 894
BspFNI CGCG 1 cut(s) 1123
BspLI GGNNCC 3 cut(s) 1051, 1210, 1302
BspMAI CTGCAG 2 cut(s) 391, 757
BspMI ACCTGC 3 cut(s) 1022, 1288, 1302
BspPI GGATC 3 cut(s) 206, 218, 448
BsrDI GCAATG 1 cut(s) 717
BsrI ACTGG 3 cut(s) 180, 628, 735
BssECI CCNNGG 4 cut(s) 62, 619, 875, 1052
BssMI GATC 5 cut(s) 211, 223, 440, 675, 981
BssSI CACGAG 1 cut(s) 927
BssT1I CCWWGG 2 cut(s) 62, 875
Bst2BI CACGAG 1 cut(s) 927
Bst2UI CCWGG 3 cut(s) 378, 621, 1054
Bst4CI ACNGT 7 cut(s) 94, 307, 451, 509, 911, 919, 1171
Bst6I CTCTTC 1 cut(s) 82
BstAPI GCANNNNNTGC 2 cut(s) 425, 489
BstC8I GCNNGC 5 cut(s) 33, 417, 693, 697, 732
BstF5I GGATG 4 cut(s) 484, 534, 823, 1131
BstFNI CGCG 1 cut(s) 1123
BstHHI GCGC 1 cut(s) 1123
BstKTI GATC 5 cut(s) 214, 226, 443, 678, 984
BstMBI GATC 5 cut(s) 211, 223, 440, 675, 981
BstMWI GCNNNNNNNGC 8 cut(s) 425, 434, 489, 518, 551, 566, 896, 1226
BstNI CCWGG 3 cut(s) 378, 621, 1054
BstNSI RCATGY 2 cut(s) 691, 734
BstSCI CCNGG 3 cut(s) 376, 619, 1052
BstSFI CTRYAG 4 cut(s) 360, 387, 753, 837
BstSLI GKGCMC 1 cut(s) 1053
BstUI CGCG 1 cut(s) 1123
BstV1I GCAGC 3 cut(s) 121, 653, 739
BstX2I RGATCY 2 cut(s) 211, 440
BstYI RGATCY 2 cut(s) 211, 440
BsuRI GGCC 5 cut(s) 618, 699, 783, 1051, 1209
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 4 cut(s) 484, 534, 823, 1131
BtsI GCAGTG 1 cut(s) 866
BtsIMutI CAGTG 3 cut(s) 866, 899, 924
BveI ACCTGC 3 cut(s) 1022, 1288, 1302
Cac8I GCNNGC 5 cut(s) 33, 417, 693, 697, 732
CaiI CAGNNNCTG 2 cut(s) 425, 1037
CfoI GCGC 1 cut(s) 1123
Cfr13I GGNCC 6 cut(s) 617, 698, 782, 1049, 1050, 1208
Csp6I GTAC 4 cut(s) 455, 500, 582, 1162
CviAII CATG 7 cut(s) 673, 688, 731, 746, 779, 1097, 1165
CviQI GTAC 4 cut(s) 455, 500, 582, 1162
DpnI GATC 5 cut(s) 213, 225, 442, 677, 983
DpnII GATC 5 cut(s) 211, 223, 440, 675, 981
Eam1104I CTCTTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 82
Eco130I CCWWGG 2 cut(s) 62, 875
Eco24I GRGCYC 1 cut(s) 1053
Eco32I GATATC 1 cut(s) 564
Eco57I CTGAAG 1 cut(s) 1251
Eco88I CYCGRG 1 cut(s) 971
EcoO109I RGGNCCY 2 cut(s) 1049, 1050
EcoRII CCWGG 3 cut(s) 376, 619, 1052
EcoRV GATATC 1 cut(s) 564
EcoT14I CCWWGG 2 cut(s) 62, 875
EcoT22I ATGCAT 1 cut(s) 274
EcoT38I GRGCYC 1 cut(s) 1053
ErhI CCWWGG 2 cut(s) 62, 875
FaeI CATG 7 cut(s) 676, 691, 734, 749, 782, 1100, 1168
FalI AAGNNNNNCTT 2 cut(s) 786, 818
FaqI GGGAC 1 cut(s) 1102
FatI CATG 7 cut(s) 672, 687, 730, 745, 778, 1096, 1164
FauNDI CATATG 2 cut(s) 256, 1111
FbaI TGATCA 1 cut(s) 981
Fnu4HI GCNGC 3 cut(s) 135, 642, 753
FokI GGATG 4 cut(s) 491, 521, 830, 1138
FriOI GRGCYC 1 cut(s) 1053
Fsp4HI GCNGC 3 cut(s) 135, 642, 753
FspBI CTAG 2 cut(s) 63, 1293
GlaI GCGC 1 cut(s) 1122
GluI GCNGC 3 cut(s) 135, 642, 753
GsaI CCCAGC 1 cut(s) 816
GsuI CTGGAG 1 cut(s) 1044
HaeIII GGCC 5 cut(s) 618, 699, 783, 1051, 1209
HhaI GCGC 1 cut(s) 1123
Hin1II CATG 7 cut(s) 676, 691, 734, 749, 782, 1100, 1168
Hin6I GCGC 1 cut(s) 1121
HinP1I GCGC 1 cut(s) 1121
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HindIII AAGCTT 1 cut(s) 1202
HinfI GANTC 5 cut(s) 463, 587, 652, 1057, 1148
HphI GGTGA 1 cut(s) 140
Hpy166II GTNNAC 2 cut(s) 97, 335
Hpy188I TCNGA 8 cut(s) 22, 45, 202, 288, 411, 432, 706, 981
Hpy188III TCNNGA 5 cut(s) 209, 215, 476, 929, 1061
Hpy8I GTNNAC 2 cut(s) 97, 335
HpyAV CCTTC 8 cut(s) 237, 313, 408, 511, 711, 1112, 1162, 1184
HpyCH4III ACNGT 7 cut(s) 94, 307, 451, 509, 911, 919, 1171
HpyCH4IV ACGT 1 cut(s) 249
HpyF10VI GCNNNNNNNGC 8 cut(s) 425, 434, 489, 518, 551, 566, 896, 1226
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 7 cut(s) 676, 691, 734, 749, 782, 1100, 1168
HspAI GCGC 1 cut(s) 1121
Ksp22I TGATCA 1 cut(s) 981
Kzo9I GATC 5 cut(s) 211, 223, 440, 675, 981
Lsp1109I GCAGC 3 cut(s) 121, 653, 739
LweI GCATC 5 cut(s) 121, 402, 985, 988, 1237
MaeI CTAG 2 cut(s) 63, 1293
MaeII ACGT 1 cut(s) 249
MaeIII GTNAC 4 cut(s) 526, 634, 863, 1264
MalI GATC 5 cut(s) 213, 225, 442, 677, 983
MboI GATC 5 cut(s) 211, 223, 440, 675, 981
MboII GAAGA 1 cut(s) 69
MfeI CAATTG 2 cut(s) 102, 681
MflI RGATCY 2 cut(s) 211, 440
MhlI GDGCHC 2 cut(s) 556, 1053
MluCI AATT 3 cut(s) 81, 102, 681
MlyI GAGTC 3 cut(s) 457, 1051, 1142
MmeI TCCRAC 2 cut(s) 1051, 1130
MnlI CCTC 9 cut(s) 31, 59, 119, 374, 835, 838, 934, 1180, 1231
Mph1103I ATGCAT 1 cut(s) 274
MseI TTAA 7 cut(s) 86, 141, 234, 540, 831, 852, 1278
MslI CAYNNNNRTG 1 cut(s) 1169
MspA1I CMGCKG 2 cut(s) 35, 695
MspR9I CCNGG 3 cut(s) 378, 621, 1054
MunI CAATTG 2 cut(s) 102, 681
Mva1269I GAATGC 1 cut(s) 1033
MvaI CCWGG 3 cut(s) 378, 621, 1054
MvnI CGCG 1 cut(s) 1123
MwoI GCNNNNNNNGC 8 cut(s) 425, 434, 489, 518, 551, 566, 896, 1226
NdeI CATATG 2 cut(s) 256, 1111
NdeII GATC 5 cut(s) 211, 223, 440, 675, 981
NlaIII CATG 7 cut(s) 676, 691, 734, 749, 782, 1100, 1168
NlaIV GGNNCC 3 cut(s) 1051, 1210, 1302
NmuCI GTSAC 2 cut(s) 634, 863
NsiI ATGCAT 1 cut(s) 274
NspI RCATGY 2 cut(s) 691, 734
PaeI GCATGC 1 cut(s) 734
PaqCI CACCTGC 1 cut(s) 1302
PctI GAATGC 1 cut(s) 1033
PfeI GAWTC 2 cut(s) 587, 652
PflMI CCANNNNNTGG 1 cut(s) 1112
PfoI TCCNGGA 1 cut(s) 376
PkrI GCNGC 3 cut(s) 136, 643, 754
PleI GAGTC 3 cut(s) 457, 1051, 1142
PpsI GAGTC 3 cut(s) 457, 1051, 1142
Psp6I CCWGG 3 cut(s) 376, 619, 1052
PspFI CCCAGC 1 cut(s) 812
PspGI CCWGG 3 cut(s) 376, 619, 1052
PspN4I GGNNCC 3 cut(s) 1051, 1210, 1302
PspOMI GGGCCC 1 cut(s) 1049
PspPI GGNCC 6 cut(s) 617, 698, 782, 1049, 1050, 1208
PstI CTGCAG 2 cut(s) 391, 757
PstNI CAGNNNCTG 2 cut(s) 425, 1037
PsuI RGATCY 2 cut(s) 211, 440
PvuII CAGCTG 2 cut(s) 35, 695
RsaI GTAC 4 cut(s) 456, 501, 583, 1163
RsaNI GTAC 4 cut(s) 455, 500, 582, 1162
RseI CAYNNNNRTG 1 cut(s) 1169
SaqAI TTAA 7 cut(s) 86, 141, 234, 540, 831, 852, 1278
SatI GCNGC 3 cut(s) 135, 642, 753
Sau3AI GATC 5 cut(s) 211, 223, 440, 675, 981
Sau96I GGNCC 6 cut(s) 617, 698, 782, 1049, 1050, 1208
ScaI AGTACT 1 cut(s) 501
SchI GAGTC 3 cut(s) 457, 1051, 1142
ScrFI CCNGG 3 cut(s) 378, 621, 1054
SduI GDGCHC 2 cut(s) 556, 1053
SfaNI GCATC 5 cut(s) 121, 402, 985, 988, 1237
SfcI CTRYAG 4 cut(s) 360, 387, 753, 837
SmiMI CAYNNNNRTG 1 cut(s) 1169
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
SphI GCATGC 1 cut(s) 734
Sse9I AATT 3 cut(s) 81, 102, 681
SsiI CCGC 1 cut(s) 1123
SspMI CTAG 2 cut(s) 63, 1293
StyD4I CCNGG 3 cut(s) 376, 619, 1052
StyI CCWWGG 2 cut(s) 62, 875
TaaI ACNGT 7 cut(s) 94, 307, 451, 509, 911, 919, 1171
TaiI ACGT 1 cut(s) 252
TasI AATT 3 cut(s) 81, 102, 681
TatI WGTACW 3 cut(s) 454, 499, 1161
TfiI GAWTC 2 cut(s) 587, 652
Tru1I TTAA 7 cut(s) 86, 141, 234, 540, 831, 852, 1278
Tru9I TTAA 7 cut(s) 86, 141, 234, 540, 831, 852, 1278
TscAI CASTG 3 cut(s) 866, 906, 924
TseFI GTSAC 2 cut(s) 634, 863
TseI GCWGC 3 cut(s) 134, 641, 752
Tsp45I GTSAC 2 cut(s) 634, 863
TspDTI ATGAA 4 cut(s) 17, 266, 332, 1009
TspRI CASTG 3 cut(s) 866, 906, 924
Van91I CCANNNNNTGG 1 cut(s) 1112
XceI RCATGY 2 cut(s) 691, 734
XmaJI CCTAGG 1 cut(s) 62
XspI CTAG 2 cut(s) 63, 1293
ZrmI AGTACT 1 cut(s) 501
Zsp2I ATGCAT 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.