At4g19900-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19900 AT4G19900 |
| fragaria_vesca | FvH4_3g12290 FvH4_3g12290 |
| malus_domestica | MD05G1251700.v1.1 MD10G1232500.v1.1 |
| prunus_persica | Prupe.4G112000_v2.0.a1 Prupe.4G112000_v2.0.a1 Prupe.4G112000_v2.0.a1 |
| pyrus_communis | pycom05g22960 pycom10g19550 |
| rosa_chinensis | RchiOBHm_Chr5g0020101 |
| rosa_laevigata | RLG00000031199 RLG00000032499 |
| rosa_multiflora | Rmu_sc0009586.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00058100 |
| rosa_rugosa | Rorug05G0056900 |
| rosa_samantha | Rh5AG146900 Rh5BG146500 Rh5CG158000 Rh5DG145900 |
| rosa_wichuraiana | Rw5G012980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 257, 287 |
| AccB1I | GGYRCC | 2 cut(s) | 772, 1173 |
| AccBSI | CCGCTC | 1 cut(s) | 851 |
| AccI | GTMKAC | 1 cut(s) | 51 |
| AccII | CGCG | 2 cut(s) | 22, 542 |
| AccIII | TCCGGA | 1 cut(s) | 1084 |
| AclWI | GGATC | 3 cut(s) | 299, 337, 481 |
| AcoI | YGGCCR | 1 cut(s) | 336 |
| AcsI | RAATTY | 3 cut(s) | 913, 931, 1144 |
| AcyI | GRCGYC | 4 cut(s) | 48, 207, 270, 702 |
| AfaI | GTAC | 2 cut(s) | 1286, 1333 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 44, 314, 320 |
| AgsI | TTSAA | 5 cut(s) | 385, 643, 895, 1367, 1591 |
| AjiI | CACGTC | 4 cut(s) | 244, 358, 484, 1214 |
| AjnI | CCWGG | 2 cut(s) | 1057, 1358 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 553, 585, 623, 655 |
| AluBI | AGCT | 6 cut(s) | 658, 1249, 1269, 1408, 1708, 1799 |
| AluI | AGCT | 6 cut(s) | 658, 1249, 1269, 1408, 1708, 1799 |
| Alw21I | GWGCWC | 1 cut(s) | 249 |
| Alw26I | GTCTC | 5 cut(s) | 100, 273, 1232, 1781, 1880 |
| AlwI | GGATC | 3 cut(s) | 299, 337, 481 |
| Aor13HI | TCCGGA | 1 cut(s) | 1084 |
| AoxI | GGCC | 2 cut(s) | 26, 336 |
| ApeKI | GCWGC | 4 cut(s) | 310, 685, 1421, 1717 |
| ApoI | RAATTY | 3 cut(s) | 913, 931, 1144 |
| AspLEI | GCGC | 2 cut(s) | 62, 544 |
| AspS9I | GGNCC | 1 cut(s) | 27 |
| AsuC2I | CCSGG | 3 cut(s) | 315, 340, 900 |
| AsuHPI | GGTGA | 4 cut(s) | 214, 562, 844, 1910 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1909, 1942 |
| BanI | GGYRCC | 2 cut(s) | 772, 1173 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1583, 1615 |
| Bbv12I | GWGCWC | 1 cut(s) | 249 |
| BbvCI | CCTCAGC | 1 cut(s) | 578 |
| BbvI | GCAGC | 4 cut(s) | 322, 672, 1408, 1704 |
| BceAI | ACGGC | 4 cut(s) | 47, 61, 760, 1051 |
| BciT130I | CCWGG | 2 cut(s) | 1059, 1360 |
| BciVI | GTATCC | 1 cut(s) | 1937 |
| BclI | TGATCA | 1 cut(s) | 1915 |
| BcnI | CCSGG | 3 cut(s) | 315, 340, 900 |
| BcoDI | GTCTC | 5 cut(s) | 100, 273, 1232, 1781, 1880 |
| BfaI | CTAG | 3 cut(s) | 723, 918, 1905 |
| BfuI | GTATCC | 1 cut(s) | 1937 |
| Bme1390I | CCNGG | 5 cut(s) | 315, 340, 900, 1059, 1360 |
| BmgBI | CACGTC | 4 cut(s) | 244, 358, 484, 1214 |
| BmgT120I | GGNCC | 1 cut(s) | 27 |
| BmiI | GGNNCC | 3 cut(s) | 29, 774, 1175 |
| BmrFI | CCNGG | 5 cut(s) | 315, 340, 900, 1059, 1360 |
| BmrI | ACTGGG | 1 cut(s) | 121 |
| BmsI | GCATC | 3 cut(s) | 21, 1075, 1922 |
| BmuI | ACTGGG | 1 cut(s) | 121 |
| Bpu10I | CCTNAGC | 1 cut(s) | 578 |
| BpuEI | CTTGAG | 2 cut(s) | 1208, 1744 |
| BpuMI | CCSGG | 3 cut(s) | 315, 340, 900 |
| BsaHI | GRCGYC | 4 cut(s) | 48, 207, 270, 702 |
| BsaJI | CCNNGG | 1 cut(s) | 314 |
| BsaWI | WCCGGW | 1 cut(s) | 1084 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 816, 846, 873, 903 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 44, 314, 320 |
| Bse118I | RCCGGY | 2 cut(s) | 362, 487 |
| Bse1I | ACTGG | 1 cut(s) | 127 |
| BseAI | TCCGGA | 1 cut(s) | 1084 |
| BseBI | CCWGG | 2 cut(s) | 1059, 1360 |
| BseDI | CCNNGG | 1 cut(s) | 314 |
| BseGI | GGATG | 7 cut(s) | 12, 415, 519, 593, 874, 1066, 1164 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 44, 314, 320 |
| BseMII | CTCAG | 6 cut(s) | 569, 614, 746, 1227, 1504, 1776 |
| BseNI | ACTGG | 1 cut(s) | 127 |
| BseRI | GAGGAG | 8 cut(s) | 68, 71, 74, 77, 92, 640, 894, 1112 |
| BseX3I | CGGCCG | 1 cut(s) | 336 |
| BseXI | GCAGC | 4 cut(s) | 322, 672, 1408, 1704 |
| BsgI | GTGCAG | 2 cut(s) | 761, 1758 |
| Bsh1236I | CGCG | 2 cut(s) | 22, 542 |
| Bsh1285I | CGRYCG | 1 cut(s) | 339 |
| BshFI | GGCC | 2 cut(s) | 28, 338 |
| BshNI | GGYRCC | 2 cut(s) | 772, 1173 |
| BsiEI | CGRYCG | 1 cut(s) | 339 |
| BsiHKAI | GWGCWC | 1 cut(s) | 249 |
| BsiSI | CCGG | 7 cut(s) | 314, 339, 363, 488, 900, 1085, 1151 |
| BslFI | GGGAC | 2 cut(s) | 115, 743 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 44, 314, 320 |
| BsmAI | GTCTC | 5 cut(s) | 100, 273, 1232, 1781, 1880 |
| BsmBI | CGTCTC | 2 cut(s) | 100, 273 |
| BsmFI | GGGAC | 2 cut(s) | 115, 743 |
| BsmI | GAATGC | 1 cut(s) | 805 |
| BsnI | GGCC | 2 cut(s) | 28, 338 |
| Bsp1286I | GDGCHC | 1 cut(s) | 249 |
| Bsp13I | TCCGGA | 1 cut(s) | 1084 |
| Bsp143I | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| BspANI | GGCC | 2 cut(s) | 28, 338 |
| BspCNI | CTCAG | 6 cut(s) | 570, 615, 747, 1228, 1503, 1777 |
| BspEI | TCCGGA | 1 cut(s) | 1084 |
| BspFNI | CGCG | 2 cut(s) | 22, 542 |
| BspLI | GGNNCC | 3 cut(s) | 29, 774, 1175 |
| BspPI | GGATC | 3 cut(s) | 299, 337, 481 |
| BspT107I | GGYRCC | 2 cut(s) | 772, 1173 |
| BsrBI | CCGCTC | 1 cut(s) | 851 |
| BsrFI | RCCGGY | 2 cut(s) | 362, 487 |
| BsrI | ACTGG | 1 cut(s) | 127 |
| BssAI | RCCGGY | 2 cut(s) | 362, 487 |
| BssECI | CCNNGG | 1 cut(s) | 314 |
| BssMI | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| BssNI | GRCGYC | 4 cut(s) | 48, 207, 270, 702 |
| Bst2UI | CCWGG | 2 cut(s) | 1059, 1360 |
| Bst4CI | ACNGT | 3 cut(s) | 220, 979, 1403 |
| Bst6I | CTCTTC | 2 cut(s) | 557, 605 |
| BstACI | GRCGYC | 4 cut(s) | 48, 207, 270, 702 |
| BstC8I | GCNNGC | 1 cut(s) | 364 |
| BstDEI | CTNAG | 7 cut(s) | 5, 578, 623, 755, 1236, 1490, 1785 |
| BstF5I | GGATG | 7 cut(s) | 12, 415, 519, 593, 874, 1066, 1164 |
| BstFNI | CGCG | 2 cut(s) | 22, 542 |
| BstHHI | GCGC | 2 cut(s) | 62, 544 |
| BstKTI | GATC | 9 cut(s) | 69, 240, 307, 332, 355, 399, 476, 1645, 1918 |
| BstMAI | GTCTC | 5 cut(s) | 100, 273, 1232, 1781, 1880 |
| BstMBI | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| BstMCI | CGRYCG | 1 cut(s) | 339 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 269, 316, 1550, 1714 |
| BstNI | CCWGG | 2 cut(s) | 1059, 1360 |
| BstNSI | RCATGY | 1 cut(s) | 1717 |
| BstSCI | CCNGG | 5 cut(s) | 313, 338, 898, 1057, 1358 |
| BstUI | CGCG | 2 cut(s) | 22, 542 |
| BstV1I | GCAGC | 4 cut(s) | 322, 672, 1408, 1704 |
| BstZI | CGGCCG | 1 cut(s) | 336 |
| BsuI | GTATCC | 1 cut(s) | 1937 |
| BsuRI | GGCC | 2 cut(s) | 28, 338 |
| BtrI | CACGTC | 4 cut(s) | 244, 358, 484, 1214 |
| BtsCI | GGATG | 7 cut(s) | 12, 415, 519, 593, 874, 1066, 1164 |
| BtsI | GCAGTG | 1 cut(s) | 1770 |
| BtsIMutI | CAGTG | 2 cut(s) | 1408, 1770 |
| Cac8I | GCNNGC | 1 cut(s) | 364 |
| CfoI | GCGC | 2 cut(s) | 62, 544 |
| Cfr10I | RCCGGY | 2 cut(s) | 362, 487 |
| Cfr13I | GGNCC | 1 cut(s) | 27 |
| CseI | GACGC | 5 cut(s) | 37, 215, 278, 548, 691 |
| Csp6I | GTAC | 2 cut(s) | 1285, 1332 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1420, 1455 |
| CviAII | CATG | 2 cut(s) | 1603, 1714 |
| CviQI | GTAC | 2 cut(s) | 1285, 1332 |
| DdeI | CTNAG | 7 cut(s) | 5, 578, 623, 755, 1236, 1490, 1785 |
| DpnI | GATC | 9 cut(s) | 68, 239, 306, 331, 354, 398, 475, 1644, 1917 |
| DpnII | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| DraI | TTTAAA | 1 cut(s) | 1558 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 257, 287 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 257, 287 |
| EaeI | YGGCCR | 1 cut(s) | 336 |
| EagI | CGGCCG | 1 cut(s) | 336 |
| Eam1104I | CTCTTC | 2 cut(s) | 557, 605 |
| EarI | CTCTTC | 2 cut(s) | 557, 605 |
| EciI | GGCGGA | 4 cut(s) | 61, 339, 523, 1403 |
| EclXI | CGGCCG | 1 cut(s) | 336 |
| Eco52I | CGGCCG | 1 cut(s) | 336 |
| EcoRI | GAATTC | 3 cut(s) | 913, 931, 1144 |
| EcoRII | CCWGG | 2 cut(s) | 1057, 1358 |
| Esp3I | CGTCTC | 2 cut(s) | 100, 273 |
| FaeI | CATG | 2 cut(s) | 1606, 1717 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1253, 1285 |
| FaqI | GGGAC | 2 cut(s) | 115, 743 |
| FatI | CATG | 2 cut(s) | 1602, 1713 |
| FauI | CCCGC | 5 cut(s) | 119, 369, 520, 1173, 1516 |
| FauNDI | CATATG | 1 cut(s) | 1609 |
| FbaI | TGATCA | 1 cut(s) | 1915 |
| FblI | GTMKAC | 1 cut(s) | 51 |
| FokI | GGATG | 6 cut(s) | 422, 526, 600, 881, 1053, 1171 |
| FspBI | CTAG | 3 cut(s) | 723, 918, 1905 |
| GlaI | GCGC | 2 cut(s) | 61, 543 |
| HaeIII | GGCC | 2 cut(s) | 28, 338 |
| HapII | CCGG | 7 cut(s) | 314, 339, 363, 488, 900, 1085, 1151 |
| HgaI | GACGC | 5 cut(s) | 37, 215, 278, 548, 691 |
| HhaI | GCGC | 2 cut(s) | 62, 544 |
| Hin1I | GRCGYC | 4 cut(s) | 48, 207, 270, 702 |
| Hin1II | CATG | 2 cut(s) | 1606, 1717 |
| Hin6I | GCGC | 2 cut(s) | 60, 542 |
| HinP1I | GCGC | 2 cut(s) | 60, 542 |
| HinfI | GANTC | 7 cut(s) | 757, 895, 995, 1454, 1825, 1835, 1879 |
| HpaII | CCGG | 7 cut(s) | 314, 339, 363, 488, 900, 1085, 1151 |
| HphI | GGTGA | 4 cut(s) | 214, 562, 844, 1910 |
| Hpy166II | GTNNAC | 3 cut(s) | 52, 1196, 1334 |
| Hpy188III | TCNNGA | 6 cut(s) | 1085, 1313, 1451, 1471, 1761, 1883 |
| Hpy8I | GTNNAC | 3 cut(s) | 52, 1196, 1334 |
| HpyAV | CCTTC | 5 cut(s) | 547, 763, 787, 853, 1585 |
| HpyCH4III | ACNGT | 3 cut(s) | 220, 979, 1403 |
| HpyCH4IV | ACGT | 5 cut(s) | 174, 243, 357, 483, 1213 |
| HpyCH4V | TGCA | 7 cut(s) | 673, 688, 742, 1066, 1661, 1775, 1901 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 269, 316, 1550, 1714 |
| HpyF3I | CTNAG | 7 cut(s) | 5, 578, 623, 755, 1236, 1490, 1785 |
| HpySE526I | ACGT | 5 cut(s) | 174, 243, 357, 483, 1213 |
| Hsp92I | GRCGYC | 4 cut(s) | 48, 207, 270, 702 |
| Hsp92II | CATG | 2 cut(s) | 1606, 1717 |
| HspAI | GCGC | 2 cut(s) | 60, 542 |
| Kpn2I | TCCGGA | 1 cut(s) | 1084 |
| KroI | GCCGGC | 1 cut(s) | 362 |
| KroNI | GCCGGC | 1 cut(s) | 364 |
| Ksp22I | TGATCA | 1 cut(s) | 1915 |
| Kzo9I | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| LmnI | GCTCC | 2 cut(s) | 655, 1705 |
| Lsp1109I | GCAGC | 4 cut(s) | 322, 672, 1408, 1704 |
| LweI | GCATC | 3 cut(s) | 21, 1075, 1922 |
| MaeI | CTAG | 3 cut(s) | 723, 918, 1905 |
| MaeII | ACGT | 5 cut(s) | 174, 243, 357, 483, 1213 |
| MaeIII | GTNAC | 3 cut(s) | 41, 220, 1320 |
| MalI | GATC | 9 cut(s) | 68, 239, 306, 331, 354, 398, 475, 1644, 1917 |
| MbiI | CCGCTC | 1 cut(s) | 851 |
| MboI | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| MboII | GAAGA | 7 cut(s) | 340, 406, 574, 622, 802, 1476, 1863 |
| MfeI | CAATTG | 3 cut(s) | 1242, 1495, 1740 |
| MhlI | GDGCHC | 1 cut(s) | 249 |
| MluCI | AATT | 8 cut(s) | 649, 913, 931, 1121, 1144, 1242, 1495, 1740 |
| MlyI | GAGTC | 3 cut(s) | 766, 1004, 1844 |
| MmeI | TCCRAC | 3 cut(s) | 210, 225, 961 |
| MreI | CGCCGGCG | 1 cut(s) | 362 |
| MroI | TCCGGA | 1 cut(s) | 1084 |
| MroNI | GCCGGC | 1 cut(s) | 362 |
| MseI | TTAA | 6 cut(s) | 164, 662, 765, 1260, 1557, 1625 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1212, 1401 |
| MspA1I | CMGCKG | 2 cut(s) | 577, 1180 |
| MspI | CCGG | 7 cut(s) | 314, 339, 363, 488, 900, 1085, 1151 |
| MspR9I | CCNGG | 5 cut(s) | 315, 340, 900, 1059, 1360 |
| MunI | CAATTG | 3 cut(s) | 1242, 1495, 1740 |
| Mva1269I | GAATGC | 1 cut(s) | 805 |
| MvaI | CCWGG | 2 cut(s) | 1059, 1360 |
| MvnI | CGCG | 2 cut(s) | 22, 542 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 269, 316, 1550, 1714 |
| NaeI | GCCGGC | 1 cut(s) | 364 |
| NciI | CCSGG | 3 cut(s) | 315, 340, 900 |
| NdeI | CATATG | 1 cut(s) | 1609 |
| NdeII | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| NgoMIV | GCCGGC | 1 cut(s) | 362 |
| NlaIII | CATG | 2 cut(s) | 1606, 1717 |
| NlaIV | GGNNCC | 3 cut(s) | 29, 774, 1175 |
| NmuCI | GTSAC | 1 cut(s) | 220 |
| NspI | RCATGY | 1 cut(s) | 1717 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 237, 246, 249, 255, 264, 288, 297, 363 |
| PctI | GAATGC | 1 cut(s) | 805 |
| PdiI | GCCGGC | 1 cut(s) | 364 |
| PfeI | GAWTC | 4 cut(s) | 895, 1454, 1825, 1879 |
| PflFI | GACNNNGTC | 2 cut(s) | 254, 287 |
| PleI | GAGTC | 3 cut(s) | 765, 1003, 1843 |
| PpsI | GAGTC | 3 cut(s) | 765, 1003, 1843 |
| Psp6I | CCWGG | 2 cut(s) | 1057, 1358 |
| PspGI | CCWGG | 2 cut(s) | 1057, 1358 |
| PspN4I | GGNNCC | 3 cut(s) | 29, 774, 1175 |
| PspPI | GGNCC | 1 cut(s) | 27 |
| PsyI | GACNNNGTC | 2 cut(s) | 254, 287 |
| RsaI | GTAC | 2 cut(s) | 1286, 1333 |
| RsaNI | GTAC | 2 cut(s) | 1285, 1332 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1212, 1401 |
| SaqAI | TTAA | 6 cut(s) | 164, 662, 765, 1260, 1557, 1625 |
| Sau3AI | GATC | 9 cut(s) | 66, 237, 304, 329, 352, 396, 473, 1642, 1915 |
| Sau96I | GGNCC | 1 cut(s) | 27 |
| SchI | GAGTC | 3 cut(s) | 766, 1004, 1844 |
| ScrFI | CCNGG | 5 cut(s) | 315, 340, 900, 1059, 1360 |
| SduI | GDGCHC | 1 cut(s) | 249 |
| SfaNI | GCATC | 3 cut(s) | 21, 1075, 1922 |
| SgrAI | CRCCGGYG | 1 cut(s) | 362 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1212, 1401 |
| SmlI | CTYRAG | 2 cut(s) | 1187, 1759 |
| SmoI | CTYRAG | 2 cut(s) | 1187, 1759 |
| Sse9I | AATT | 8 cut(s) | 649, 913, 931, 1121, 1144, 1242, 1495, 1740 |
| SspMI | CTAG | 3 cut(s) | 723, 918, 1905 |
| StyD4I | CCNGG | 5 cut(s) | 313, 338, 898, 1057, 1358 |
| TaaI | ACNGT | 3 cut(s) | 220, 979, 1403 |
| TaiI | ACGT | 5 cut(s) | 177, 246, 360, 486, 1216 |
| TaqI | TCGA | 7 cut(s) | 240, 249, 291, 351, 399, 938, 1210 |
| TasI | AATT | 8 cut(s) | 649, 913, 931, 1121, 1144, 1242, 1495, 1740 |
| TauI | GCSGC | 6 cut(s) | 25, 28, 212, 215, 508, 577 |
| TfiI | GAWTC | 4 cut(s) | 895, 1454, 1825, 1879 |
| Tru1I | TTAA | 6 cut(s) | 164, 662, 765, 1260, 1557, 1625 |
| Tru9I | TTAA | 6 cut(s) | 164, 662, 765, 1260, 1557, 1625 |
| TscAI | CASTG | 2 cut(s) | 1408, 1777 |
| TseFI | GTSAC | 1 cut(s) | 220 |
| TseI | GCWGC | 4 cut(s) | 310, 685, 1421, 1717 |
| Tsp45I | GTSAC | 1 cut(s) | 220 |
| TspGWI | ACGGA | 4 cut(s) | 5, 82, 533, 1678 |
| TspRI | CASTG | 2 cut(s) | 1408, 1777 |
| Tth111I | GACNNNGTC | 2 cut(s) | 254, 287 |
| XapI | RAATTY | 3 cut(s) | 913, 931, 1144 |
| XceI | RCATGY | 1 cut(s) | 1717 |
| XmiI | GTMKAC | 1 cut(s) | 51 |
| XspI | CTAG | 3 cut(s) | 723, 918, 1905 |