Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0009629

Physical Location & Seq

Genomic Coordinates Forward (+)

38347775 .. 38354270

Gene Structure 6496 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1251700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGCTGAGAAGTATTCGGTCCCGGCGGCCCCACCGACCCTGTTACGGCGTTTACATCTGCGCCGTTATCTCCGCTCTCCTCCTCCTCTTCTCCGTCTCTCTTCTCTACACTCGCCTCTCTCACTCCCAATCTCACCACTTCCAGCACCGCCACCAGAACCCCGATGCCCAATACGACGACGTTTCTCTCACCAACCCCCTCGTTTCCGACGAGGACAACGACGTCGGCTCCATCGCCACCGAGGACAAGATCGACGAGCTCGACGACGTCGTAGAGGAGACTCCCAAAGACGAAGAGGTAGACGAGGAGGACGACCCCCAATCGGAGATTTCGCAATCTAGGGTTTCCGGGTATGTATTCGATCACGTGACTGGGGTTATCAGGAGGGGTTTCAATAAGCGTAAAATTGAGGATTGGGAGGAGGATTACAATGGGTTTAACGTGGGATTGGTTGCATTGGATAAGAGCAAGGTGGCGTTCGGATCGGACGATGTGCCGGTGGATATGGAGGTGCGGCGGAGGGTGAGTGAGGTGGCAGACATTGAGGACGCGCTATTGCTGAAGGTGGGGAAGAGGGTTTCGCCGCTGAGGGAGGGGTGGGGGGAGTGGTTTGATAAGAAAGGCGATTTCTTGAGGAGGGATAGGATGTTTAAGGCCAATCTGGAGATGCTGAATCCATTGCAGAATCCAATGCTGCAGGACCCTGATGCGGTTGGGATTACTTGGTTGACAAAGGGTGATAAGGTGCTGCAGAAATGGTGGCTGAATCACTTTAAGAAGGTCCCGTTTCTCGGGAAGAAGCCGTTGGGAGTTTCGGGGAGGCCCCGAGAAGTGAAGCTCCAGGAAAATGGTAGTGAGGGTAGGAAAATGGAGAGTGATAGTGGAGATGGTGTTGTGAATGGAAGGGGAAATGGAATAGGTGTAGGAACAGAACTCGAAGAAAATGAGAGTAAGGGGTTGAATTCAGGTTCAAATGGAAATTCTAGTACTGATAGGAATTTGTCTTACATGAGTAATGTGAGTGACAAAGCAATTGGGAACACCGTTGAACAAATTAGTGAGTTGGATCCGGATCCAGTGGGTGGCTTTAAGGATGAGTTTTCAGGTTTTATATATGCAGATGGCAAGAGATGGGGTTACTATCCCGGTTTGGATCCGTTTTTGTCATTCTCCGATTTTGTGGATGCGTTTTTCAGGAAAGGGAAATGTGAGATGAGGGTGTTTATGGTGTGGAATTCTCCCCCTTGGATGTATAGTGTAAGACAGCAGCGGGGACTTGAGAGTGTACTGTCCCATCATCGAGATGCCTGTGTTTTAGTGTTGTCTGAGACAATTGAGCTCGATTTCTTTAAAGATAACTTTTTGAAGGACGGTTACAAAGTTGCTGTCGCTATGCCAAATCTTGATGAATTACTAAGGGATACACCGACCCATATATTTGCTTCTGCCTGGTTCGAATGGAGAAAGACCAAGTATTATGCTACTCATTACAGTGAGCTTGTCCGCCTTGCTGCTCTCTACAAATATGGAGGAATATATCTTGATTCTGATATCATAGTTCTGAAGCCGTTATCTTCACTTCACAATTCTGTTGGTAAAGAGGATCGACCTGCAGGAAGTTCTTTGAATGGTGCTGTAATGGCATTTAATAGGAGGAGTCACTTCATAATGGAGTGCTTGAAAGAGTTTTATATGACATATGATGATACTCGTCTGAGATTCAATGGGGCTGATCTTTTGACAAGAGTTGCGCGAAGGTTTTTCAGTGGTCGTAATAAATCAGCTAGACAGCTGGAGCTGAAAGTGCAACCTTCTTTTGTATTTTTCCCAATCACCTCTCAGAATATCTCAAGATACTTCACTGCACCGTCAACAGACACTGAAAAGACTCAACAAGATGCCCTGTTCAGAAAGATTCTAGATGAGTCGTTAACATTCCATTTTTGGAACAGCTTGACATCTCCTCTCATTCCAGAGCCAGAGAGCGTTGCAGCCAGGCTTATTGACCACTCTTGTATCCGATGCACTGATGTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00601 ko00603 ko01100 map00601 map00603 map01100

Pfam Domains

Protein Families

Gb3_synth Gly_transf_sug

Protein Analysis

680

Amino Acids

77.4

Weight (kDa)

5.59

Isoelectric Point (pI)

47.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gly_transf_sug	PF04488	420 - 533	3.4e-19	Glycosyltransferase sugar-binding region containing DXD motif
Gb3_synth	PF04572	548 - 678	2.4e-24	Alpha 1,4-glycosyltransferase conserved region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19900 AT4G19900
fragaria_vesca	FvH4_3g12290 FvH4_3g12290
malus_domestica	MD05G1251700.v1.1 MD10G1232500.v1.1
prunus_persica	Prupe.4G112000_v2.0.a1 Prupe.4G112000_v2.0.a1 Prupe.4G112000_v2.0.a1
pyrus_communis	pycom05g22960 pycom10g19550
rosa_chinensis	RchiOBHm_Chr5g0020101
rosa_laevigata	RLG00000031199 RLG00000032499
rosa_multiflora	Rmu_sc0009586.1_g000002
rosa_roxburghii	Rroxscaffold_1G00058100
rosa_rugosa	Rorug05G0056900
rosa_samantha	Rh5AG146900 Rh5BG146500 Rh5CG158000 Rh5DG145900
rosa_wichuraiana	Rw5G012980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	221
AatII	GACGTC	2 cut(s)	225, 270
Acc36I	ACCTGC	1 cut(s)	1618
AccB7I	CCANNNNNTGG	1 cut(s)	1082
AccBSI	CCGCTC	1 cut(s)	74
AccI	GTMKAC	1 cut(s)	300
AccII	CGCG	2 cut(s)	551, 1753
AccIII	TCCGGA	1 cut(s)	1069
AciI	CCGC	9 cut(s)	25, 72, 148, 514, 517, 584, 710, 1270, 1504
AclWI	GGATC	8 cut(s)	490, 1061, 1067, 1074, 1080, 1148, 1161, 1611
AcsI	RAATTY	4 cut(s)	961, 979, 997, 1234
AcuI	CTGAAG	2 cut(s)	581, 1583
AcvI	CACGTG	1 cut(s)	367
AcyI	GRCGYC	2 cut(s)	222, 267
AfaI	GTAC	2 cut(s)	988, 1287
AfiI	CCNNNNNNNGG	5 cut(s)	44, 322, 709, 791, 1082
AgsI	TTSAA	8 cut(s)	394, 961, 972, 1049, 1366, 1627, 1681, 1723
AjnI	CCWGG	3 cut(s)	840, 1448, 1994
AjuI	GAANNNNNNNTTGG	2 cut(s)	788, 820
AleI	CACNNNNGTG	1 cut(s)	2030
AluBI	AGCT	8 cut(s)	259, 838, 1339, 1498, 1784, 1792, 1798, 1953
AluI	AGCT	8 cut(s)	259, 838, 1339, 1498, 1784, 1792, 1798, 1953
Alw21I	GWGCWC	2 cut(s)	261, 1341
Alw26I	GTCTC	3 cut(s)	100, 272, 1322
AlwI	GGATC	8 cut(s)	490, 1061, 1067, 1074, 1080, 1148, 1161, 1611
AlwNI	CAGNNNCTG	1 cut(s)	1880
Ama87I	CYCGRG	2 cut(s)	791, 825
Aor13HI	TCCGGA	1 cut(s)	1069
AoxI	GGCC	3 cut(s)	26, 654, 821
ApeKI	GCWGC	5 cut(s)	694, 748, 1267, 1511, 1991
ApoI	RAATTY	4 cut(s)	961, 979, 997, 1234
ArsI	GACNNNNNNTTYG	2 cut(s)	1371, 1403
AspLEI	GCGC	3 cut(s)	62, 553, 1753
AspS9I	GGNCC	5 cut(s)	18, 27, 700, 781, 822
AsuC2I	CCSGG	3 cut(s)	22, 349, 1146
AsuHPI	GGTGA	5 cut(s)	125, 181, 535, 749, 1825
AsuII	TTCGAA	1 cut(s)	1455
AvaI	CYCGRG	2 cut(s)	791, 825
AvaII	GGWCC	3 cut(s)	18, 700, 781
BaeI	ACNNNNGTAYC	2 cut(s)	1999, 2032
BamHI	GGATCC	3 cut(s)	1066, 1072, 1153
BanII	GRGCYC	2 cut(s)	261, 1341
BarI	GAAGNNNNNNTAC	2 cut(s)	1358, 1390
BbrPI	CACGTG	1 cut(s)	367
Bbv12I	GWGCWC	2 cut(s)	261, 1341
BbvCI	CCTCAGC	1 cut(s)	587
BbvI	GCAGC	5 cut(s)	681, 735, 1279, 1498, 2003
BccI	CCATC	5 cut(s)	239, 881, 1115, 1125, 1302
BceAI	ACGGC	4 cut(s)	47, 61, 787, 1552
BciT130I	CCWGG	3 cut(s)	842, 1450, 1996
BciVI	GTATCC	2 cut(s)	1414, 2027
BcnI	CCSGG	3 cut(s)	22, 349, 1146
BcoDI	GTCTC	3 cut(s)	100, 272, 1322
BfaI	CTAG	4 cut(s)	339, 984, 1785, 1919
BfmI	CTRYAG	3 cut(s)	695, 749, 1611
BfuAI	ACCTGC	1 cut(s)	1618
BfuI	GTATCC	2 cut(s)	1414, 2027
BisI	GCNGC	8 cut(s)	26, 515, 584, 695, 749, 1268, 1512, 1992
BlsI	GCNGC	8 cut(s)	27, 516, 585, 696, 750, 1269, 1513, 1993
BmcAI	AGTACT	1 cut(s)	988
Bme1390I	CCNGG	6 cut(s)	22, 349, 842, 1146, 1450, 1996
Bme18I	GGWCC	3 cut(s)	18, 700, 781
BmeT110I	CYCGRG	2 cut(s)	791, 825
BmgT120I	GGNCC	5 cut(s)	18, 27, 700, 781, 822
BmiI	GGNNCC	9 cut(s)	20, 29, 229, 702, 783, 824, 1068, 1074, 1155
BmrFI	CCNGG	6 cut(s)	22, 349, 842, 1146, 1450, 1996
BmrI	ACTGGG	1 cut(s)	381
BmsI	GCATC	7 cut(s)	154, 657, 697, 1174, 1294, 1888, 2012
BmuI	ACTGGG	1 cut(s)	381
BpmI	CTGGAG	3 cut(s)	683, 824, 1814
Bpu10I	CCTNAGC	1 cut(s)	587
Bpu14I	TTCGAA	1 cut(s)	1455
BpuEI	CTTGAG	3 cut(s)	652, 1298, 1834
BpuMI	CCSGG	3 cut(s)	22, 349, 1146
BsaAI	YACGTR	1 cut(s)	367
BsaBI	GATNNNNATC	1 cut(s)	1071
BsaHI	GRCGYC	2 cut(s)	222, 267
BsaJI	CCNNGG	2 cut(s)	240, 1244
BsaWI	WCCGGW	1 cut(s)	1069
BsaXI	ACNNNNNCTCC	6 cut(s)	212, 242, 511, 541, 876, 906
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 322, 709, 791, 1082
Bse118I	RCCGGY	1 cut(s)	496
Bse1I	ACTGG	2 cut(s)	376, 1076
Bse3DI	GCAATG	1 cut(s)	677
Bse8I	GATNNNNATC	1 cut(s)	1071
BseAI	TCCGGA	1 cut(s)	1069
BseBI	CCWGG	3 cut(s)	842, 1450, 1996
BseDI	CCNNGG	2 cut(s)	240, 1244
BseGI	GGATG	4 cut(s)	651, 1099, 1189, 1254
BseJI	GATNNNNATC	1 cut(s)	1071
BseLI	CCNNNNNNNGG	5 cut(s)	44, 322, 709, 791, 1082
BseMI	GCAATG	1 cut(s)	677
BseMII	CTCAG	4 cut(s)	578, 1317, 1706, 1853
BseNI	ACTGG	2 cut(s)	376, 1076
BseRI	GAGGAG	9 cut(s)	68, 71, 74, 290, 320, 434, 649, 1669, 1953
BseXI	GCAGC	5 cut(s)	681, 735, 1279, 1498, 2003
BsgI	GTGCAG	1 cut(s)	1848
Bsh1236I	CGCG	2 cut(s)	551, 1753
BshFI	GGCC	3 cut(s)	28, 656, 823
BsiHKAI	GWGCWC	2 cut(s)	261, 1341
BsiHKCI	CYCGRG	2 cut(s)	791, 825
BsiSI	CCGG	5 cut(s)	22, 348, 497, 1070, 1146
BslFI	GGGAC	4 cut(s)	4, 767, 1276, 1287
BslI	CCNNNNNNNGG	5 cut(s)	44, 322, 709, 791, 1082
BsmAI	GTCTC	3 cut(s)	100, 272, 1322
BsmBI	CGTCTC	1 cut(s)	100
BsmFI	GGGAC	4 cut(s)	4, 767, 1276, 1287
BsnI	GGCC	3 cut(s)	28, 656, 823
BsoBI	CYCGRG	2 cut(s)	791, 825
Bsp119I	TTCGAA	1 cut(s)	1455
Bsp1286I	GDGCHC	2 cut(s)	261, 1341
Bsp13I	TCCGGA	1 cut(s)	1069
Bsp143I	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
BspACI	CCGC	9 cut(s)	25, 72, 148, 514, 517, 584, 710, 1270, 1504
BspANI	GGCC	3 cut(s)	28, 656, 823
BspCNI	CTCAG	4 cut(s)	579, 1318, 1707, 1852
BspEI	TCCGGA	1 cut(s)	1069
BspFNI	CGCG	2 cut(s)	551, 1753
BspLI	GGNNCC	9 cut(s)	20, 29, 229, 702, 783, 824, 1068, 1074, 1155
BspMAI	CTGCAG	3 cut(s)	699, 753, 1615
BspMI	ACCTGC	1 cut(s)	1618
BspPI	GGATC	8 cut(s)	490, 1061, 1067, 1074, 1080, 1148, 1161, 1611
BspT104I	TTCGAA	1 cut(s)	1455
BsrBI	CCGCTC	1 cut(s)	74
BsrDI	GCAATG	1 cut(s)	677
BsrFI	RCCGGY	1 cut(s)	496
BsrI	ACTGG	2 cut(s)	376, 1076
BssAI	RCCGGY	1 cut(s)	496
BssECI	CCNNGG	2 cut(s)	240, 1244
BssMI	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
BssNI	GRCGYC	2 cut(s)	222, 267
BssT1I	CCWWGG	1 cut(s)	1244
Bst2UI	CCWGG	3 cut(s)	842, 1450, 1996
Bst4CI	ACNGT	5 cut(s)	1045, 1290, 1373, 1493, 1869
Bst6I	CTCTTC	4 cut(s)	92, 105, 288, 566
BstACI	GRCGYC	2 cut(s)	222, 267
BstBAI	YACGTR	1 cut(s)	367
BstBI	TTCGAA	1 cut(s)	1455
BstDEI	CTNAG	6 cut(s)	5, 587, 1326, 1415, 1715, 1839
BstF5I	GGATG	4 cut(s)	651, 1099, 1189, 1254
BstFNI	CGCG	2 cut(s)	551, 1753
BstHHI	GCGC	3 cut(s)	62, 553, 1753
BstKTI	GATC	8 cut(s)	252, 364, 485, 1069, 1075, 1156, 1606, 1735
BstMAI	GTCTC	3 cut(s)	100, 272, 1322
BstMBI	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
BstMWI	GCNNNNNNNGC	2 cut(s)	1640, 1804
BstNI	CCWGG	3 cut(s)	842, 1450, 1996
BstSCI	CCNGG	6 cut(s)	20, 347, 840, 1144, 1448, 1994
BstSFI	CTRYAG	3 cut(s)	695, 749, 1611
BstUI	CGCG	2 cut(s)	551, 1753
BstV1I	GCAGC	5 cut(s)	681, 735, 1279, 1498, 2003
BstX2I	RGATCY	3 cut(s)	1066, 1072, 1153
BstXI	CCANNNNNNTGG	1 cut(s)	848
BstYI	RGATCY	3 cut(s)	1066, 1072, 1153
BsuI	GTATCC	2 cut(s)	1414, 2027
BsuRI	GGCC	3 cut(s)	28, 656, 823
BtgZI	GCGATG	1 cut(s)	217
BtsCI	GGATG	4 cut(s)	651, 1099, 1189, 1254
BtsI	GCAGTG	1 cut(s)	1860
BtsIMutI	CAGTG	6 cut(s)	1083, 1498, 1771, 1860, 1878, 2025
BveI	ACCTGC	1 cut(s)	1618
CaiI	CAGNNNCTG	1 cut(s)	1880
CfoI	GCGC	3 cut(s)	62, 553, 1753
Cfr10I	RCCGGY	1 cut(s)	496
Cfr13I	GGNCC	5 cut(s)	18, 27, 700, 781, 822
CseI	GACGC	1 cut(s)	557
Csp6I	GTAC	2 cut(s)	987, 1286
CviAII	CATG	1 cut(s)	1009
CviQI	GTAC	2 cut(s)	987, 1286
DdeI	CTNAG	6 cut(s)	5, 587, 1326, 1415, 1715, 1839
DpnI	GATC	8 cut(s)	251, 363, 484, 1068, 1074, 1155, 1605, 1734
DpnII	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
DraI	TTTAAA	1 cut(s)	1351
DrdI	GACNNNNNNGTC	1 cut(s)	221
DseDI	GACNNNNNNGTC	1 cut(s)	221
Eam1104I	CTCTTC	4 cut(s)	92, 105, 288, 566
EarI	CTCTTC	4 cut(s)	92, 105, 288, 566
EciI	GGCGGA	2 cut(s)	532, 1493
Ecl136II	GAGCTC	2 cut(s)	259, 1339
Eco130I	CCWWGG	1 cut(s)	1244
Eco24I	GRGCYC	2 cut(s)	261, 1341
Eco32I	GATATC	1 cut(s)	1552
Eco47I	GGWCC	3 cut(s)	18, 700, 781
Eco53kI	GAGCTC	2 cut(s)	259, 1339
Eco57I	CTGAAG	2 cut(s)	581, 1583
Eco72I	CACGTG	1 cut(s)	367
Eco88I	CYCGRG	2 cut(s)	791, 825
EcoICRI	GAGCTC	2 cut(s)	259, 1339
EcoO109I	RGGNCCY	3 cut(s)	700, 781, 822
EcoRI	GAATTC	2 cut(s)	961, 1234
EcoRII	CCWGG	3 cut(s)	840, 1448, 1994
EcoRV	GATATC	1 cut(s)	1552
EcoT14I	CCWWGG	1 cut(s)	1244
EcoT38I	GRGCYC	2 cut(s)	261, 1341
ErhI	CCWWGG	1 cut(s)	1244
Esp3I	CGTCTC	1 cut(s)	100
FaeI	CATG	1 cut(s)	1012
FaqI	GGGAC	4 cut(s)	4, 767, 1276, 1287
FatI	CATG	1 cut(s)	1008
FauI	CCCGC	1 cut(s)	1263
FauNDI	CATATG	1 cut(s)	1699
FblI	GTMKAC	1 cut(s)	300
Fnu4HI	GCNGC	8 cut(s)	26, 515, 584, 695, 749, 1268, 1512, 1992
FokI	GGATG	4 cut(s)	658, 1106, 1196, 1261
FriOI	GRGCYC	2 cut(s)	261, 1341
Fsp4HI	GCNGC	8 cut(s)	26, 515, 584, 695, 749, 1268, 1512, 1992
FspBI	CTAG	4 cut(s)	339, 984, 1785, 1919
GlaI	GCGC	3 cut(s)	61, 552, 1752
GluI	GCNGC	8 cut(s)	26, 515, 584, 695, 749, 1268, 1512, 1992
GsuI	CTGGAG	3 cut(s)	683, 824, 1814
HaeIII	GGCC	3 cut(s)	28, 656, 823
HapII	CCGG	5 cut(s)	22, 348, 497, 1070, 1146
HgaI	GACGC	1 cut(s)	557
HhaI	GCGC	3 cut(s)	62, 553, 1753
Hin1I	GRCGYC	2 cut(s)	222, 267
Hin1II	CATG	1 cut(s)	1012
Hin6I	GCGC	3 cut(s)	60, 551, 1751
HinP1I	GCGC	3 cut(s)	60, 551, 1751
HincII	GTYRAC	3 cut(s)	729, 1872, 1932
HindII	GTYRAC	3 cut(s)	729, 1872, 1932
HpaI	GTTAAC	1 cut(s)	1932
HpaII	CCGG	5 cut(s)	22, 348, 497, 1070, 1146
HphI	GGTGA	5 cut(s)	125, 181, 535, 749, 1825
Hpy166II	GTNNAC	6 cut(s)	52, 301, 729, 1286, 1872, 1932
Hpy8I	GTNNAC	6 cut(s)	52, 301, 729, 1286, 1872, 1932
Hpy99I	CGWCG	9 cut(s)	179, 182, 212, 224, 227, 257, 266, 269, 272
HpyAV	CCTTC	6 cut(s)	556, 772, 897, 1360, 1749, 1821
HpyCH4III	ACNGT	5 cut(s)	1045, 1290, 1373, 1493, 1869
HpyCH4IV	ACGT	5 cut(s)	180, 222, 267, 366, 441
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1640, 1804
HpyF3I	CTNAG	6 cut(s)	5, 587, 1326, 1415, 1715, 1839
HpySE526I	ACGT	5 cut(s)	180, 222, 267, 366, 441
Hsp92I	GRCGYC	2 cut(s)	222, 267
Hsp92II	CATG	1 cut(s)	1012
HspAI	GCGC	3 cut(s)	60, 551, 1751
Kpn2I	TCCGGA	1 cut(s)	1069
KspAI	GTTAAC	1 cut(s)	1932
Kzo9I	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
LmnI	GCTCC	3 cut(s)	233, 843, 1795
Lsp1109I	GCAGC	5 cut(s)	681, 735, 1279, 1498, 2003
LweI	GCATC	7 cut(s)	154, 657, 697, 1174, 1294, 1888, 2012
MaeI	CTAG	4 cut(s)	339, 984, 1785, 1919
MaeII	ACGT	5 cut(s)	180, 222, 267, 366, 441
MaeIII	GTNAC	6 cut(s)	41, 367, 1022, 1136, 1373, 1658
MalI	GATC	8 cut(s)	251, 363, 484, 1068, 1074, 1155, 1605, 1734
MbiI	CCGCTC	1 cut(s)	74
MboI	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
MboII	GAAGA	7 cut(s)	79, 92, 305, 583, 808, 950, 1566
MfeI	CAATTG	2 cut(s)	1032, 1332
MflI	RGATCY	3 cut(s)	1066, 1072, 1153
MhlI	GDGCHC	2 cut(s)	261, 1341
MlyI	GAGTC	4 cut(s)	274, 1666, 1882, 1934
MmeI	TCCRAC	2 cut(s)	231, 1044
MroI	TCCGGA	1 cut(s)	1069
MseI	TTAA	7 cut(s)	438, 651, 774, 1089, 1350, 1647, 1931
MslI	CAYNNNNRTG	3 cut(s)	1302, 1491, 2030
MspA1I	CMGCKG	3 cut(s)	586, 1270, 1792
MspI	CCGG	5 cut(s)	22, 348, 497, 1070, 1146
MspR9I	CCNGG	6 cut(s)	22, 349, 842, 1146, 1450, 1996
MunI	CAATTG	2 cut(s)	1032, 1332
MvaI	CCWGG	3 cut(s)	842, 1450, 1996
MvnI	CGCG	2 cut(s)	551, 1753
MwoI	GCNNNNNNNGC	2 cut(s)	1640, 1804
NciI	CCSGG	3 cut(s)	22, 349, 1146
NdeI	CATATG	1 cut(s)	1699
NdeII	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
NlaIII	CATG	1 cut(s)	1012
NlaIV	GGNNCC	9 cut(s)	20, 29, 229, 702, 783, 824, 1068, 1074, 1155
NmuCI	GTSAC	3 cut(s)	367, 1022, 1658
NspV	TTCGAA	1 cut(s)	1455
OliI	CACNNNNGTG	1 cut(s)	2030
PcsI	WCGNNNNNNNCGW	7 cut(s)	207, 216, 258, 261, 267, 309, 486
PfeI	GAWTC	6 cut(s)	673, 685, 766, 1544, 1719, 1915
PflFI	GACNNNGTC	1 cut(s)	266
PflMI	CCANNNNNTGG	1 cut(s)	1082
PfoI	TCCNGGA	1 cut(s)	840
PkrI	GCNGC	8 cut(s)	27, 516, 585, 696, 750, 1269, 1513, 1993
PleI	GAGTC	4 cut(s)	274, 1665, 1882, 1933
PmaCI	CACGTG	1 cut(s)	367
PmlI	CACGTG	1 cut(s)	367
PpsI	GAGTC	4 cut(s)	274, 1665, 1882, 1933
Ppu21I	YACGTR	1 cut(s)	367
PpuMI	RGGWCCY	2 cut(s)	700, 781
Psp124BI	GAGCTC	2 cut(s)	261, 1341
Psp5II	RGGWCCY	2 cut(s)	700, 781
Psp6I	CCWGG	3 cut(s)	840, 1448, 1994
PspCI	CACGTG	1 cut(s)	367
PspGI	CCWGG	3 cut(s)	840, 1448, 1994
PspN4I	GGNNCC	9 cut(s)	20, 29, 229, 702, 783, 824, 1068, 1074, 1155
PspPI	GGNCC	5 cut(s)	18, 27, 700, 781, 822
PspPPI	RGGWCCY	2 cut(s)	700, 781
PstI	CTGCAG	3 cut(s)	699, 753, 1615
PstNI	CAGNNNCTG	1 cut(s)	1880
PsuI	RGATCY	3 cut(s)	1066, 1072, 1153
PsyI	GACNNNGTC	1 cut(s)	266
PvuII	CAGCTG	1 cut(s)	1792
RsaI	GTAC	2 cut(s)	988, 1287
RsaNI	GTAC	2 cut(s)	987, 1286
RseI	CAYNNNNRTG	3 cut(s)	1302, 1491, 2030
SacI	GAGCTC	2 cut(s)	261, 1341
SaqAI	TTAA	7 cut(s)	438, 651, 774, 1089, 1350, 1647, 1931
SatI	GCNGC	8 cut(s)	26, 515, 584, 695, 749, 1268, 1512, 1992
Sau3AI	GATC	8 cut(s)	249, 361, 482, 1066, 1072, 1153, 1603, 1732
Sau96I	GGNCC	5 cut(s)	18, 27, 700, 781, 822
SbfI	CCTGCAGG	1 cut(s)	1615
ScaI	AGTACT	1 cut(s)	988
SchI	GAGTC	4 cut(s)	274, 1666, 1882, 1934
ScrFI	CCNGG	6 cut(s)	22, 349, 842, 1146, 1450, 1996
SdaI	CCTGCAGG	1 cut(s)	1615
SduI	GDGCHC	2 cut(s)	261, 1341
SfaNI	GCATC	7 cut(s)	154, 657, 697, 1174, 1294, 1888, 2012
SfcI	CTRYAG	3 cut(s)	695, 749, 1611
SfuI	TTCGAA	1 cut(s)	1455
SinI	GGWCC	3 cut(s)	18, 700, 781
SmiMI	CAYNNNNRTG	3 cut(s)	1302, 1491, 2030
SmlI	CTYRAG	3 cut(s)	631, 1277, 1849
SmoI	CTYRAG	3 cut(s)	631, 1277, 1849
Sse8387I	CCTGCAGG	1 cut(s)	1615
SsiI	CCGC	9 cut(s)	25, 72, 148, 514, 517, 584, 710, 1270, 1504
SspMI	CTAG	4 cut(s)	339, 984, 1785, 1919
SstI	GAGCTC	2 cut(s)	261, 1341
StyD4I	CCNGG	6 cut(s)	20, 347, 840, 1144, 1448, 1994
StyI	CCWWGG	1 cut(s)	1244
TaaI	ACNGT	5 cut(s)	1045, 1290, 1373, 1493, 1869
TaiI	ACGT	5 cut(s)	183, 225, 270, 369, 444
TaqI	TCGA	8 cut(s)	252, 261, 360, 936, 1300, 1341, 1455, 1606
TaqII	GACCGA	1 cut(s)	6
TatI	WGTACW	2 cut(s)	986, 1285
TauI	GCSGC	3 cut(s)	28, 517, 586
TfiI	GAWTC	6 cut(s)	673, 685, 766, 1544, 1719, 1915
Tru1I	TTAA	7 cut(s)	438, 651, 774, 1089, 1350, 1647, 1931
Tru9I	TTAA	7 cut(s)	438, 651, 774, 1089, 1350, 1647, 1931
TscAI	CASTG	6 cut(s)	1083, 1498, 1771, 1867, 1885, 2032
TseFI	GTSAC	3 cut(s)	367, 1022, 1658
TseI	GCWGC	5 cut(s)	694, 748, 1267, 1511, 1991
Tsp45I	GTSAC	3 cut(s)	367, 1022, 1658
TspDTI	ATGAA	2 cut(s)	1422, 1654
TspGWI	ACGGA	2 cut(s)	82, 1146
TspRI	CASTG	6 cut(s)	1083, 1498, 1771, 1867, 1885, 2032
Tth111I	GACNNNGTC	1 cut(s)	266
Van91I	CCANNNNNTGG	1 cut(s)	1082
VpaK11BI	GGWCC	3 cut(s)	18, 700, 781
XapI	RAATTY	4 cut(s)	961, 979, 997, 1234
XbaI	TCTAGA	1 cut(s)	1918
XmiI	GTMKAC	1 cut(s)	300
XspI	CTAG	4 cut(s)	339, 984, 1785, 1919
ZraI	GACGTC	2 cut(s)	223, 268
ZrmI	AGTACT	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.