Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0009629

Physical Location & Seq

Genomic Coordinates Forward (+)

32891206 .. 32896761

Gene Structure 5556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1232500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGCTGAGAAGTATTCGATCCCGGCGGCCCCACCGACCGCGTTACGGCGTTTACATCTGCGCCGTTATCTCCGCTCTCCTCCTCCTCCTCTCCGTCTCTCTCCTCTACACTCGCCTTTCTCACTCCCAATCTCACCACTTCCACTACCGTCACCAGAACCCCGATTCCCAATACGACGACGTTTCTCTCACCAACCCCCTCGTCTCCGATGAGGGCAACGACGTCGGCTCCATCGCCACCGAGGACAAGATCGACGAGCTCGACGACGTCGTAGAGGAGACACCCAAAGACGAGGAAGTGGACGATGAGGACGACCCCCAATCGGAGATTTCGCAATCTAGGGTTTCCGGTTATGTATTCGATCACGTGACTGGGGTTATCAGGAGGGGTTTCATTAAGCGTAAAATTGAGGATTGGGAGGAGGATTACAATGGGTTTAACATGGGATTGGGTGCATTGGATAAGAGCAAGGTGGCGTTCGGATCGGACGATGTGCCGGTGGATATGGAGGTGCGGCGGAGGATGAGTGAGGTGGCGGGTATTGAGGACGCGCTATTGCTGAAGGTGGGGAAGAGGGTTTCGCCGCTAAGGGAGGGGTGGGGGGAGTGGTTTGACAAGAAAGGCGATTTCCTGAGGAGGGATAGGATGTTTAAGTCCAATGTGGAGAAGCTGAATCCGTTGCACAATCCAATGCTGCAGGACCCTGATGCGGTTGGGGTTACTGGGTTGACAAAGGGTGATAAGGTGCTGCAGAAATGGTGGCTGAATCACTTTAAGAAGGTCCCGTTTCTCGGGAAGAAGCCGCTGGGAGTTTCGGGGAGGCCCCGAGAAGTGAAGCTCCGGGAAAATGGCCGCGAGGGTAGGAAAATGGAGAGTGATGGTGGAGATGGTGTTGTGAATGGAAGGGGAAATGGAATAGGTGTAGGAACAGAAGTTGCTGAAAATGAGAGTAAGGGTTTGAATTCAGGTTCAAGTGGTAATTCTAGTACCGACAGGAATTTGTCTTACATGAGTAATGTGAGTGATAAAGCGATTGGGAACACCGTTGAACAAATTAGTGAGTCGGATCCGGATCAAGTGGGTGGCTTTAAGGATGAGTTTTCAGGTGTGATATATGCAGATGGCAAGAGATGGGGTTACTATCCCGGTTTGGACCCGCTTTTATCATTCTCTGATTTTGTGGATGTGTTTTTCAGGAAGGGGAAATGTGAGATGAGGGTTTTTATGGTGTGGAATTCTCCCCCTTGGATGTATACTGTAAGACAGCAGCGGGGACTTGAGAGTTTACTATCCCGTCATCGAGATGCCTGTGTTTTGGTGTTGTCTGAGACAATTGAGCTTGATTTCTTTAAAAATAACTTTTTGAAGGACGGTTACAAAGTTGCTGTTGCTATGCCAAATCTTGATGAATTACTAAGGGATACACCGACCCATATATTTGCTTCTGCCTGGTCCGAGTGGAGAAAGACCAAGTATTATGCTACTCATTACAGTGAGCTCGTCCGCCTTGCTGCTCTCTACAAATACGGAGGAATATATCTTGATTCTGATATCATAGTTCTGAAGCCTTTATCATCACTTCACAATTCTGTTGGTAAAGAGGATCAACCTGCGGGAAGTTCTTTGAATGGTGCTGTAATGGCATTTAATAGGAGGAGCCCCTTCATAATGGAGTGCCTGAAAGAGTTTTATATGACATATGATGATACTCGTTTGAGATTGAATGGGGCTGATCTTTTGACAAGAGTTGCACGAAGGTTTTTGAGTAGTCGTAATAAATCAGTTAGACAGCTGGAGCTGAAAGTGCAGCCTTCTTTCATATTTTTTCCAATTGCTTCTCAGAATATCTCAAGATACTTCACTGCACCGTCAACAGAGACTGAAAAGGCTCAACAAGATGCCCTGTTCAGAAAGATTCTAGATGAGTCGTTAACATTCCATTTTTGGAACAGCTTGACCTCTGCTCTCATTCCAGAGCCAGAGAGCCTTGCTACCAGACTTATTGACCACCCTTGTATCCGATGCACTGATGTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00601 ko00603 ko01100 map00601 map00603 map01100

Pfam Domains

Protein Families

Gb3_synth Gly_transf_sug

Protein Analysis

680

Amino Acids

77.05

Weight (kDa)

6.08

Isoelectric Point (pI)

48.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gly_transf_sug	PF04488	420 - 533	1.3e-18	Glycosyltransferase sugar-binding region containing DXD motif
Gb3_synth	PF04572	548 - 678	5.1e-24	Alpha 1,4-glycosyltransferase conserved region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19900 AT4G19900
fragaria_vesca	FvH4_3g12290 FvH4_3g12290
malus_domestica	MD05G1251700.v1.1 MD10G1232500.v1.1
prunus_persica	Prupe.4G112000_v2.0.a1 Prupe.4G112000_v2.0.a1 Prupe.4G112000_v2.0.a1
pyrus_communis	pycom05g22960 pycom10g19550
rosa_chinensis	RchiOBHm_Chr5g0020101
rosa_laevigata	RLG00000031199 RLG00000032499
rosa_multiflora	Rmu_sc0009586.1_g000002
rosa_roxburghii	Rroxscaffold_1G00058100
rosa_rugosa	Rorug05G0056900
rosa_samantha	Rh5AG146900 Rh5BG146500 Rh5CG158000 Rh5DG145900
rosa_wichuraiana	Rw5G012980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	225, 270
Acc36I	ACCTGC	1 cut(s)	1618
AccBSI	CCGCTC	1 cut(s)	74
AccI	GTMKAC	1 cut(s)	1253
AccII	CGCG	3 cut(s)	40, 551, 855
AccIII	TCCGGA	1 cut(s)	1069
AclWI	GGATC	6 cut(s)	12, 490, 1061, 1074, 1080, 1611
AcoI	YGGCCR	1 cut(s)	850
AcsI	RAATTY	3 cut(s)	961, 997, 1234
AcuI	CTGAAG	2 cut(s)	581, 1583
AcvI	CACGTG	1 cut(s)	367
AcyI	GRCGYC	2 cut(s)	222, 267
AfaI	GTAC	1 cut(s)	988
AfiI	CCNNNNNNNGG	5 cut(s)	44, 322, 637, 709, 791
AgsI	TTSAA	6 cut(s)	961, 972, 1049, 1366, 1627, 1723
AjnI	CCWGG	1 cut(s)	1448
AleI	CACNNNNGTG	1 cut(s)	2030
AloI	GAACNNNNNNTCC	2 cut(s)	149, 181
AluBI	AGCT	8 cut(s)	259, 670, 838, 1339, 1498, 1792, 1798, 1953
AluI	AGCT	8 cut(s)	259, 670, 838, 1339, 1498, 1792, 1798, 1953
Alw21I	GWGCWC	2 cut(s)	261, 1500
Alw26I	GTCTC	5 cut(s)	100, 208, 272, 1322, 1871
AlwI	GGATC	6 cut(s)	12, 490, 1061, 1074, 1080, 1611
AlwNI	CAGNNNCTG	1 cut(s)	1880
Ama87I	CYCGRG	2 cut(s)	791, 825
Aor13HI	TCCGGA	1 cut(s)	1069
AoxI	GGCC	3 cut(s)	26, 821, 850
ApeKI	GCWGC	5 cut(s)	694, 748, 1267, 1511, 1807
ApoI	RAATTY	3 cut(s)	961, 997, 1234
AspLEI	GCGC	2 cut(s)	62, 553
AspS9I	GGNCC	6 cut(s)	27, 700, 781, 822, 1153, 1452
AsuC2I	CCSGG	3 cut(s)	22, 842, 1146
AsuHPI	GGTGA	4 cut(s)	125, 143, 181, 749
AvaI	CYCGRG	2 cut(s)	791, 825
AvaII	GGWCC	4 cut(s)	700, 781, 1153, 1452
AxyI	CCTNAGG	1 cut(s)	632
BaeI	ACNNNNGTAYC	2 cut(s)	1999, 2032
BamHI	GGATCC	1 cut(s)	1066
BanII	GRGCYC	3 cut(s)	261, 1500, 1661
BarI	GAAGNNNNNNTAC	2 cut(s)	1358, 1390
BbrPI	CACGTG	1 cut(s)	367
Bbv12I	GWGCWC	2 cut(s)	261, 1500
BbvI	GCAGC	5 cut(s)	681, 735, 1279, 1498, 1819
BccI	CCATC	5 cut(s)	239, 872, 881, 1115, 1125
BceAI	ACGGC	2 cut(s)	47, 61
BcgI	CGANNNNNNTGC	2 cut(s)	205, 239
BciT130I	CCWGG	1 cut(s)	1450
BciVI	GTATCC	2 cut(s)	1414, 2027
BcnI	CCSGG	3 cut(s)	22, 842, 1146
BcoDI	GTCTC	5 cut(s)	100, 208, 272, 1322, 1871
BfaI	CTAG	3 cut(s)	339, 984, 1919
BfmI	CTRYAG	2 cut(s)	695, 749
BfuAI	ACCTGC	1 cut(s)	1618
BfuI	GTATCC	2 cut(s)	1414, 2027
Bme1390I	CCNGG	4 cut(s)	22, 842, 1146, 1450
Bme18I	GGWCC	4 cut(s)	700, 781, 1153, 1452
BmeT110I	CYCGRG	2 cut(s)	791, 825
BmgT120I	GGNCC	6 cut(s)	27, 700, 781, 822, 1153, 1452
BmiI	GGNNCC	8 cut(s)	29, 229, 702, 783, 824, 1068, 1155, 1658
BmrFI	CCNGG	4 cut(s)	22, 842, 1146, 1450
BmrI	ACTGGG	2 cut(s)	381, 732
BmsI	GCATC	4 cut(s)	697, 1294, 1888, 2012
BmuI	ACTGGG	2 cut(s)	381, 732
BpmI	CTGGAG	1 cut(s)	1814
Bpu10I	CCTNAGC	1 cut(s)	587
BpuEI	CTTGAG	2 cut(s)	1298, 1834
BpuMI	CCSGG	3 cut(s)	22, 842, 1146
BsaAI	YACGTR	1 cut(s)	367
BsaBI	GATNNNNATC	1 cut(s)	1071
BsaHI	GRCGYC	2 cut(s)	222, 267
BsaJI	CCNNGG	2 cut(s)	240, 1244
BsaWI	WCCGGW	2 cut(s)	347, 1069
BsaXI	ACNNNNNCTCC	6 cut(s)	212, 242, 511, 541, 876, 906
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 322, 637, 709, 791
Bse118I	RCCGGY	1 cut(s)	496
Bse1I	ACTGG	2 cut(s)	376, 727
Bse21I	CCTNAGG	1 cut(s)	632
Bse8I	GATNNNNATC	1 cut(s)	1071
BseAI	TCCGGA	1 cut(s)	1069
BseBI	CCWGG	1 cut(s)	1450
BseDI	CCNNGG	2 cut(s)	240, 1244
BseGI	GGATG	5 cut(s)	528, 651, 1099, 1189, 1254
BseJI	GATNNNNATC	1 cut(s)	1071
BseLI	CCNNNNNNNGG	5 cut(s)	44, 322, 637, 709, 791
BseMII	CTCAG	3 cut(s)	623, 1317, 1853
BseNI	ACTGG	2 cut(s)	376, 727
BseRI	GAGGAG	9 cut(s)	68, 71, 74, 77, 92, 290, 434, 649, 1669
BseXI	GCAGC	5 cut(s)	681, 735, 1279, 1498, 1819
BseYI	CCCAGC	1 cut(s)	805
BsgI	GTGCAG	2 cut(s)	1826, 1848
Bsh1236I	CGCG	3 cut(s)	40, 551, 855
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	3 cut(s)	28, 823, 852
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	2 cut(s)	261, 1500
BsiHKCI	CYCGRG	2 cut(s)	791, 825
BsiSI	CCGG	6 cut(s)	22, 348, 497, 841, 1070, 1146
BslFI	GGGAC	2 cut(s)	767, 1287
BslI	CCNNNNNNNGG	5 cut(s)	44, 322, 637, 709, 791
BsmAI	GTCTC	5 cut(s)	100, 208, 272, 1322, 1871
BsmBI	CGTCTC	2 cut(s)	100, 208
BsmFI	GGGAC	2 cut(s)	767, 1287
BsnI	GGCC	3 cut(s)	28, 823, 852
BsoBI	CYCGRG	2 cut(s)	791, 825
Bsp1286I	GDGCHC	3 cut(s)	261, 1500, 1661
Bsp13I	TCCGGA	1 cut(s)	1069
Bsp143I	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
BspANI	GGCC	3 cut(s)	28, 823, 852
BspCNI	CTCAG	3 cut(s)	624, 1318, 1852
BspEI	TCCGGA	1 cut(s)	1069
BspFNI	CGCG	3 cut(s)	40, 551, 855
BspLI	GGNNCC	8 cut(s)	29, 229, 702, 783, 824, 1068, 1155, 1658
BspMAI	CTGCAG	2 cut(s)	699, 753
BspMI	ACCTGC	1 cut(s)	1618
BspPI	GGATC	6 cut(s)	12, 490, 1061, 1074, 1080, 1611
BsrBI	CCGCTC	1 cut(s)	74
BsrFI	RCCGGY	1 cut(s)	496
BsrI	ACTGG	2 cut(s)	376, 727
BssAI	RCCGGY	1 cut(s)	496
BssECI	CCNNGG	2 cut(s)	240, 1244
BssMI	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
BssNAI	GTATAC	1 cut(s)	1254
BssNI	GRCGYC	2 cut(s)	222, 267
BssT1I	CCWWGG	1 cut(s)	1244
Bst1107I	GTATAC	1 cut(s)	1254
Bst2UI	CCWGG	1 cut(s)	1450
Bst4CI	ACNGT	6 cut(s)	149, 1045, 1258, 1373, 1493, 1869
Bst6I	CTCTTC	1 cut(s)	566
BstACI	GRCGYC	2 cut(s)	222, 267
BstBAI	YACGTR	1 cut(s)	367
BstDEI	CTNAG	6 cut(s)	5, 587, 632, 1326, 1415, 1839
BstF5I	GGATG	5 cut(s)	528, 651, 1099, 1189, 1254
BstFNI	CGCG	3 cut(s)	40, 551, 855
BstHHI	GCGC	2 cut(s)	62, 553
BstKTI	GATC	8 cut(s)	20, 252, 364, 485, 1069, 1075, 1606, 1735
BstMAI	GTCTC	5 cut(s)	100, 208, 272, 1322, 1871
BstMBI	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
BstMCI	CGRYCG	1 cut(s)	38
BstMWI	GCNNNNNNNGC	2 cut(s)	1640, 1804
BstNI	CCWGG	1 cut(s)	1450
BstSCI	CCNGG	4 cut(s)	20, 840, 1144, 1448
BstSFI	CTRYAG	2 cut(s)	695, 749
BstUI	CGCG	3 cut(s)	40, 551, 855
BstV1I	GCAGC	5 cut(s)	681, 735, 1279, 1498, 1819
BstX2I	RGATCY	1 cut(s)	1066
BstYI	RGATCY	1 cut(s)	1066
BstZ17I	GTATAC	1 cut(s)	1254
Bsu36I	CCTNAGG	1 cut(s)	632
BsuI	GTATCC	2 cut(s)	1414, 2027
BsuRI	GGCC	3 cut(s)	28, 823, 852
BtgZI	GCGATG	1 cut(s)	217
BtsCI	GGATG	5 cut(s)	528, 651, 1099, 1189, 1254
BtsI	GCAGTG	1 cut(s)	1860
BtsIMutI	CAGTG	3 cut(s)	1498, 1860, 2025
BveI	ACCTGC	1 cut(s)	1618
CaiI	CAGNNNCTG	1 cut(s)	1880
CfoI	GCGC	2 cut(s)	62, 553
Cfr10I	RCCGGY	1 cut(s)	496
Cfr13I	GGNCC	6 cut(s)	27, 700, 781, 822, 1153, 1452
CseI	GACGC	1 cut(s)	557
Csp6I	GTAC	1 cut(s)	987
CviAII	CATG	2 cut(s)	442, 1009
CviQI	GTAC	1 cut(s)	987
DdeI	CTNAG	6 cut(s)	5, 587, 632, 1326, 1415, 1839
DpnI	GATC	8 cut(s)	19, 251, 363, 484, 1068, 1074, 1605, 1734
DpnII	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
DraI	TTTAAA	1 cut(s)	1351
EaeI	YGGCCR	1 cut(s)	850
Eam1104I	CTCTTC	1 cut(s)	566
EarI	CTCTTC	1 cut(s)	566
EciI	GGCGGA	2 cut(s)	532, 1493
Ecl136II	GAGCTC	2 cut(s)	259, 1498
Eco130I	CCWWGG	1 cut(s)	1244
Eco24I	GRGCYC	3 cut(s)	261, 1500, 1661
Eco32I	GATATC	1 cut(s)	1552
Eco47I	GGWCC	4 cut(s)	700, 781, 1153, 1452
Eco53kI	GAGCTC	2 cut(s)	259, 1498
Eco57I	CTGAAG	2 cut(s)	581, 1583
Eco72I	CACGTG	1 cut(s)	367
Eco81I	CCTNAGG	1 cut(s)	632
Eco88I	CYCGRG	2 cut(s)	791, 825
EcoICRI	GAGCTC	2 cut(s)	259, 1498
EcoO109I	RGGNCCY	3 cut(s)	700, 781, 822
EcoRI	GAATTC	2 cut(s)	961, 1234
EcoRII	CCWGG	1 cut(s)	1448
EcoRV	GATATC	1 cut(s)	1552
EcoT14I	CCWWGG	1 cut(s)	1244
EcoT38I	GRGCYC	3 cut(s)	261, 1500, 1661
ErhI	CCWWGG	1 cut(s)	1244
Esp3I	CGTCTC	2 cut(s)	100, 208
FaeI	CATG	2 cut(s)	445, 1012
FaqI	GGGAC	2 cut(s)	767, 1287
FatI	CATG	2 cut(s)	441, 1008
FauI	CCCGC	4 cut(s)	529, 1164, 1263, 1606
FauNDI	CATATG	1 cut(s)	1699
FblI	GTMKAC	1 cut(s)	1253
FokI	GGATG	5 cut(s)	535, 658, 1106, 1196, 1261
FriOI	GRGCYC	3 cut(s)	261, 1500, 1661
FspBI	CTAG	3 cut(s)	339, 984, 1919
GlaI	GCGC	2 cut(s)	61, 552
GsaI	CCCAGC	1 cut(s)	809
GsuI	CTGGAG	1 cut(s)	1814
HaeIII	GGCC	3 cut(s)	28, 823, 852
HapII	CCGG	6 cut(s)	22, 348, 497, 841, 1070, 1146
HgaI	GACGC	1 cut(s)	557
HhaI	GCGC	2 cut(s)	62, 553
Hin1I	GRCGYC	2 cut(s)	222, 267
Hin1II	CATG	2 cut(s)	445, 1012
Hin6I	GCGC	2 cut(s)	60, 551
HinP1I	GCGC	2 cut(s)	60, 551
HincII	GTYRAC	3 cut(s)	729, 1872, 1932
HindII	GTYRAC	3 cut(s)	729, 1872, 1932
HinfI	GANTC	7 cut(s)	164, 673, 766, 1061, 1544, 1915, 1925
HpaI	GTTAAC	1 cut(s)	1932
HpaII	CCGG	6 cut(s)	22, 348, 497, 841, 1070, 1146
HphI	GGTGA	4 cut(s)	125, 143, 181, 749
Hpy166II	GTNNAC	7 cut(s)	52, 301, 729, 1254, 1286, 1872, 1932
Hpy8I	GTNNAC	7 cut(s)	52, 301, 729, 1254, 1286, 1872, 1932
Hpy99I	CGWCG	8 cut(s)	179, 182, 224, 227, 257, 266, 269, 272
HpyAV	CCTTC	8 cut(s)	556, 772, 897, 1192, 1360, 1672, 1749, 1821
HpyCH4III	ACNGT	6 cut(s)	149, 1045, 1258, 1373, 1493, 1869
HpyCH4IV	ACGT	4 cut(s)	180, 222, 267, 366
HpyCH4V	TGCA	9 cut(s)	455, 682, 697, 751, 1118, 1751, 1807, 1865, 2025
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1640, 1804
HpyF3I	CTNAG	6 cut(s)	5, 587, 632, 1326, 1415, 1839
HpySE526I	ACGT	4 cut(s)	180, 222, 267, 366
Hsp92I	GRCGYC	2 cut(s)	222, 267
Hsp92II	CATG	2 cut(s)	445, 1012
HspAI	GCGC	2 cut(s)	60, 551
Kpn2I	TCCGGA	1 cut(s)	1069
KspAI	GTTAAC	1 cut(s)	1932
Kzo9I	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
LmnI	GCTCC	4 cut(s)	233, 843, 1656, 1795
Lsp1109I	GCAGC	5 cut(s)	681, 735, 1279, 1498, 1819
LweI	GCATC	4 cut(s)	697, 1294, 1888, 2012
MaeI	CTAG	3 cut(s)	339, 984, 1919
MaeII	ACGT	4 cut(s)	180, 222, 267, 366
MaeIII	GTNAC	6 cut(s)	41, 149, 367, 718, 1136, 1373
MalI	GATC	8 cut(s)	19, 251, 363, 484, 1068, 1074, 1605, 1734
MbiI	CCGCTC	1 cut(s)	74
MboI	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
MboII	GAAGA	2 cut(s)	583, 808
MfeI	CAATTG	2 cut(s)	1332, 1830
MflI	RGATCY	1 cut(s)	1066
MhlI	GDGCHC	3 cut(s)	261, 1500, 1661
MlyI	GAGTC	2 cut(s)	1070, 1934
MmeI	TCCRAC	1 cut(s)	1044
MroI	TCCGGA	1 cut(s)	1069
MseI	TTAA	8 cut(s)	396, 438, 651, 774, 1089, 1350, 1647, 1931
MslI	CAYNNNNRTG	3 cut(s)	1302, 1491, 2030
MspA1I	CMGCKG	3 cut(s)	805, 1270, 1792
MspI	CCGG	6 cut(s)	22, 348, 497, 841, 1070, 1146
MspR9I	CCNGG	4 cut(s)	22, 842, 1146, 1450
MunI	CAATTG	2 cut(s)	1332, 1830
MvaI	CCWGG	1 cut(s)	1450
MvnI	CGCG	3 cut(s)	40, 551, 855
MwoI	GCNNNNNNNGC	2 cut(s)	1640, 1804
NciI	CCSGG	3 cut(s)	22, 842, 1146
NdeI	CATATG	1 cut(s)	1699
NdeII	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
NlaIII	CATG	2 cut(s)	445, 1012
NlaIV	GGNNCC	8 cut(s)	29, 229, 702, 783, 824, 1068, 1155, 1658
NmuCI	GTSAC	2 cut(s)	149, 367
OliI	CACNNNNGTG	1 cut(s)	2030
PcsI	WCGNNNNNNNCGW	5 cut(s)	258, 261, 267, 309, 486
PfeI	GAWTC	5 cut(s)	164, 673, 766, 1544, 1915
PflFI	GACNNNGTC	1 cut(s)	266
PfoI	TCCNGGA	1 cut(s)	840
PleI	GAGTC	2 cut(s)	1069, 1933
PmaCI	CACGTG	1 cut(s)	367
PmlI	CACGTG	1 cut(s)	367
PpsI	GAGTC	2 cut(s)	1069, 1933
Ppu21I	YACGTR	1 cut(s)	367
PpuMI	RGGWCCY	2 cut(s)	700, 781
Psp124BI	GAGCTC	2 cut(s)	261, 1500
Psp5II	RGGWCCY	2 cut(s)	700, 781
Psp6I	CCWGG	1 cut(s)	1448
PspCI	CACGTG	1 cut(s)	367
PspFI	CCCAGC	1 cut(s)	805
PspGI	CCWGG	1 cut(s)	1448
PspN4I	GGNNCC	8 cut(s)	29, 229, 702, 783, 824, 1068, 1155, 1658
PspPI	GGNCC	6 cut(s)	27, 700, 781, 822, 1153, 1452
PspPPI	RGGWCCY	2 cut(s)	700, 781
PstI	CTGCAG	2 cut(s)	699, 753
PstNI	CAGNNNCTG	1 cut(s)	1880
PsuI	RGATCY	1 cut(s)	1066
PsyI	GACNNNGTC	1 cut(s)	266
PvuII	CAGCTG	1 cut(s)	1792
RsaI	GTAC	1 cut(s)	988
RsaNI	GTAC	1 cut(s)	987
RseI	CAYNNNNRTG	3 cut(s)	1302, 1491, 2030
SacI	GAGCTC	2 cut(s)	261, 1500
SaqAI	TTAA	8 cut(s)	396, 438, 651, 774, 1089, 1350, 1647, 1931
Sau3AI	GATC	8 cut(s)	17, 249, 361, 482, 1066, 1072, 1603, 1732
Sau96I	GGNCC	6 cut(s)	27, 700, 781, 822, 1153, 1452
SchI	GAGTC	2 cut(s)	1070, 1934
ScrFI	CCNGG	4 cut(s)	22, 842, 1146, 1450
SduI	GDGCHC	3 cut(s)	261, 1500, 1661
SfaNI	GCATC	4 cut(s)	697, 1294, 1888, 2012
SfcI	CTRYAG	2 cut(s)	695, 749
SinI	GGWCC	4 cut(s)	700, 781, 1153, 1452
SmiMI	CAYNNNNRTG	3 cut(s)	1302, 1491, 2030
SmlI	CTYRAG	2 cut(s)	1277, 1849
SmoI	CTYRAG	2 cut(s)	1277, 1849
SspMI	CTAG	3 cut(s)	339, 984, 1919
SstI	GAGCTC	2 cut(s)	261, 1500
StyD4I	CCNGG	4 cut(s)	20, 840, 1144, 1448
StyI	CCWWGG	1 cut(s)	1244
TaaI	ACNGT	6 cut(s)	149, 1045, 1258, 1373, 1493, 1869
TaiI	ACGT	4 cut(s)	183, 225, 270, 369
TaqI	TCGA	5 cut(s)	16, 252, 261, 360, 1300
TauI	GCSGC	5 cut(s)	28, 517, 586, 805, 855
TfiI	GAWTC	5 cut(s)	164, 673, 766, 1544, 1915
Tru1I	TTAA	8 cut(s)	396, 438, 651, 774, 1089, 1350, 1647, 1931
Tru9I	TTAA	8 cut(s)	396, 438, 651, 774, 1089, 1350, 1647, 1931
TscAI	CASTG	3 cut(s)	1498, 1867, 2032
TseFI	GTSAC	2 cut(s)	149, 367
TseI	GCWGC	5 cut(s)	694, 748, 1267, 1511, 1807
Tsp45I	GTSAC	2 cut(s)	149, 367
TspDTI	ATGAA	4 cut(s)	382, 1422, 1654, 1807
TspGWI	ACGGA	3 cut(s)	82, 666, 1542
TspRI	CASTG	3 cut(s)	1498, 1867, 2032
Tth111I	GACNNNGTC	1 cut(s)	266
VpaK11BI	GGWCC	4 cut(s)	700, 781, 1153, 1452
XapI	RAATTY	3 cut(s)	961, 997, 1234
XbaI	TCTAGA	1 cut(s)	1918
XmiI	GTMKAC	1 cut(s)	1253
XspI	CTAG	3 cut(s)	339, 984, 1919
ZraI	GACGTC	2 cut(s)	223, 268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.