Belongs to the cyclin family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16330 |
| fragaria_vesca | FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 |
| malus_domestica | MD05G1264400.v1.1 MD10G1212300.v1.1 |
| prunus_persica | Prupe.4G130400_v2.0.a1 Prupe.4G130400_v2.0.a1 Prupe.4G130400_v2.0.a1 |
| pyrus_communis | pycom05g21260 pycom10g17990 |
| rosa_chinensis | RchiOBHm_Chr5g0023901 |
| rosa_laevigata | RLG00000032747 |
| rosa_multiflora | Rmu_sc0004175.1_g000014 Rmu_sc0005837.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00055310 |
| rosa_rugosa | Rorug05G0080200 |
| rosa_samantha | Rh5AG170500 Rh5BG167600 Rh5CG183100 Rh5DG169700 |
| rosa_wichuraiana | Rw5G015420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 655 |
| Acc65I | GGTACC | 1 cut(s) | 1015 |
| AccB1I | GGYRCC | 1 cut(s) | 1015 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 386, 1025 |
| AccBSI | CCGCTC | 1 cut(s) | 487 |
| AccI | GTMKAC | 2 cut(s) | 146, 902 |
| AciI | CCGC | 2 cut(s) | 115, 487 |
| AclWI | GGATC | 1 cut(s) | 462 |
| AcoI | YGGCCR | 1 cut(s) | 210 |
| AcsI | RAATTY | 3 cut(s) | 634, 968, 1340 |
| AcuI | CTGAAG | 3 cut(s) | 408, 540, 1032 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 7 cut(s) | 195, 750, 873, 1017, 1223, 1332, 1653 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 121, 156, 386, 1025 |
| AflII | CTTAAG | 1 cut(s) | 641 |
| AgeI | ACCGGT | 1 cut(s) | 196 |
| AgsI | TTSAA | 7 cut(s) | 64, 87, 547, 968, 1328, 1339, 1576 |
| AhlI | ACTAGT | 1 cut(s) | 1432 |
| AjnI | CCWGG | 2 cut(s) | 474, 1061 |
| AluBI | AGCT | 7 cut(s) | 24, 578, 780, 962, 1142, 1156, 1517 |
| AluI | AGCT | 7 cut(s) | 24, 578, 780, 962, 1142, 1156, 1517 |
| Alw21I | GWGCWC | 1 cut(s) | 26 |
| Alw26I | GTCTC | 2 cut(s) | 414, 1527 |
| AlwI | GGATC | 1 cut(s) | 462 |
| Ama87I | CYCGRG | 1 cut(s) | 882 |
| AoxI | GGCC | 4 cut(s) | 210, 675, 1257, 1438 |
| ApeKI | GCWGC | 4 cut(s) | 161, 1035, 1156, 1631 |
| ApoI | RAATTY | 3 cut(s) | 634, 968, 1340 |
| AsiGI | ACCGGT | 1 cut(s) | 196 |
| Asp718I | GGTACC | 1 cut(s) | 1015 |
| AspS9I | GGNCC | 4 cut(s) | 35, 550, 911, 1112 |
| AsuHPI | GGTGA | 2 cut(s) | 211, 1387 |
| AsuII | TTCGAA | 1 cut(s) | 836 |
| AvaI | CYCGRG | 1 cut(s) | 882 |
| AvaII | GGWCC | 4 cut(s) | 35, 550, 911, 1112 |
| AxyI | CCTNAGG | 1 cut(s) | 1254 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 855, 888, 1635, 1668 |
| BanI | GGYRCC | 1 cut(s) | 1015 |
| BanII | GRGCYC | 1 cut(s) | 26 |
| Bbv12I | GWGCWC | 1 cut(s) | 26 |
| BbvCI | CCTCAGC | 1 cut(s) | 981 |
| BbvI | GCAGC | 4 cut(s) | 148, 1022, 1143, 1618 |
| BccI | CCATC | 2 cut(s) | 800, 1027 |
| BciT130I | CCWGG | 2 cut(s) | 476, 1063 |
| BcoDI | GTCTC | 2 cut(s) | 414, 1527 |
| BcuI | ACTAGT | 1 cut(s) | 1432 |
| BfaI | CTAG | 4 cut(s) | 441, 1124, 1433, 1530 |
| BfmI | CTRYAG | 1 cut(s) | 666 |
| BfrI | CTTAAG | 1 cut(s) | 641 |
| BglII | AGATCT | 2 cut(s) | 1085, 1212 |
| BisI | GCNGC | 4 cut(s) | 162, 1036, 1157, 1632 |
| BlsI | GCNGC | 4 cut(s) | 163, 1037, 1158, 1633 |
| BmcAI | AGTACT | 2 cut(s) | 750, 1223 |
| Bme1390I | CCNGG | 2 cut(s) | 476, 1063 |
| Bme18I | GGWCC | 4 cut(s) | 35, 550, 911, 1112 |
| BmeT110I | CYCGRG | 1 cut(s) | 882 |
| BmgT120I | GGNCC | 4 cut(s) | 35, 550, 911, 1112 |
| BmiI | GGNNCC | 2 cut(s) | 552, 1017 |
| BmrFI | CCNGG | 2 cut(s) | 476, 1063 |
| BmsI | GCATC | 8 cut(s) | 163, 358, 840, 879, 1341, 1469, 1492, 1518 |
| BpmI | CTGGAG | 2 cut(s) | 739, 1045 |
| Bpu10I | CCTNAGC | 1 cut(s) | 981 |
| Bpu14I | TTCGAA | 1 cut(s) | 836 |
| BpuEI | CTTGAG | 2 cut(s) | 1386, 1610 |
| Bsa29I | ATCGAT | 2 cut(s) | 91, 1167 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1508 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 1527 |
| BsaJI | CCNNGG | 4 cut(s) | 475, 883, 1487, 1672 |
| BsaWI | WCCGGW | 1 cut(s) | 196 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1582, 1612 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 121, 156, 386, 1025 |
| Bse118I | RCCGGY | 1 cut(s) | 196 |
| Bse1I | ACTGG | 3 cut(s) | 1114, 1191, 1322 |
| Bse21I | CCTNAGG | 1 cut(s) | 1254 |
| Bse3DI | GCAATG | 3 cut(s) | 337, 601, 772 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1508 |
| BseBI | CCWGG | 2 cut(s) | 476, 1063 |
| BseCI | ATCGAT | 2 cut(s) | 91, 1167 |
| BseDI | CCNNGG | 4 cut(s) | 475, 883, 1487, 1672 |
| BseGI | GGATG | 3 cut(s) | 894, 991, 1483 |
| BseJI | GATNNNNATC | 1 cut(s) | 1508 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 121, 156, 386, 1025 |
| BseMI | GCAATG | 3 cut(s) | 337, 601, 772 |
| BseMII | CTCAG | 8 cut(s) | 242, 387, 867, 972, 1019, 1268, 1527, 1649 |
| BseNI | ACTGG | 3 cut(s) | 1114, 1191, 1322 |
| BseRI | GAGGAG | 4 cut(s) | 541, 1096, 1281, 1570 |
| BseXI | GCAGC | 4 cut(s) | 148, 1022, 1143, 1618 |
| BsgI | GTGCAG | 2 cut(s) | 453, 1431 |
| BshFI | GGCC | 4 cut(s) | 212, 677, 1259, 1440 |
| BshNI | GGYRCC | 1 cut(s) | 1015 |
| BshTI | ACCGGT | 1 cut(s) | 196 |
| BshVI | ATCGAT | 2 cut(s) | 91, 1167 |
| BsiHKAI | GWGCWC | 1 cut(s) | 26 |
| BsiHKCI | CYCGRG | 1 cut(s) | 882 |
| BsiSI | CCGG | 1 cut(s) | 197 |
| BslFI | GGGAC | 3 cut(s) | 536, 865, 1391 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 121, 156, 386, 1025 |
| BsmAI | GTCTC | 2 cut(s) | 414, 1527 |
| BsmFI | GGGAC | 3 cut(s) | 536, 865, 1391 |
| BsmI | GAATGC | 1 cut(s) | 1560 |
| BsnI | GGCC | 4 cut(s) | 212, 677, 1259, 1440 |
| Bso31I | GGTCTC | 1 cut(s) | 1527 |
| BsoBI | CYCGRG | 1 cut(s) | 882 |
| Bsp119I | TTCGAA | 1 cut(s) | 836 |
| Bsp1286I | GDGCHC | 1 cut(s) | 26 |
| Bsp143I | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| BspACI | CCGC | 2 cut(s) | 115, 487 |
| BspANI | GGCC | 4 cut(s) | 212, 677, 1259, 1440 |
| BspCNI | CTCAG | 8 cut(s) | 243, 388, 868, 973, 1018, 1267, 1526, 1648 |
| BspDI | ATCGAT | 2 cut(s) | 91, 1167 |
| BspLI | GGNNCC | 2 cut(s) | 552, 1017 |
| BspPI | GGATC | 1 cut(s) | 462 |
| BspQI | GCTCTTC | 1 cut(s) | 1146 |
| BspT104I | TTCGAA | 1 cut(s) | 836 |
| BspT107I | GGYRCC | 1 cut(s) | 1015 |
| BspTI | CTTAAG | 1 cut(s) | 641 |
| BspTNI | GGTCTC | 1 cut(s) | 1527 |
| BsrBI | CCGCTC | 1 cut(s) | 487 |
| BsrDI | GCAATG | 3 cut(s) | 337, 601, 772 |
| BsrFI | RCCGGY | 1 cut(s) | 196 |
| BsrI | ACTGG | 3 cut(s) | 1114, 1191, 1322 |
| BssAI | RCCGGY | 1 cut(s) | 196 |
| BssECI | CCNNGG | 4 cut(s) | 475, 883, 1487, 1672 |
| BssMI | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| BssNAI | GTATAC | 2 cut(s) | 147, 903 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 2 cut(s) | 1487, 1672 |
| Bst1107I | GTATAC | 2 cut(s) | 147, 903 |
| Bst2UI | CCWGG | 2 cut(s) | 476, 1063 |
| Bst4CI | ACNGT | 2 cut(s) | 121, 448 |
| Bst6I | CTCTTC | 1 cut(s) | 1146 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 641 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1035 |
| BstBI | TTCGAA | 1 cut(s) | 836 |
| BstC8I | GCNNGC | 3 cut(s) | 436, 694, 1027 |
| BstDEI | CTNAG | 9 cut(s) | 251, 396, 876, 897, 981, 1005, 1254, 1513, 1635 |
| BstF5I | GGATG | 3 cut(s) | 894, 991, 1483 |
| BstKTI | GATC | 4 cut(s) | 470, 1088, 1215, 1348 |
| BstMAI | GTCTC | 2 cut(s) | 414, 1527 |
| BstMBI | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1035 |
| BstNI | CCWGG | 2 cut(s) | 476, 1063 |
| BstSCI | CCNGG | 2 cut(s) | 474, 1061 |
| BstSFI | CTRYAG | 1 cut(s) | 666 |
| BstV1I | GCAGC | 4 cut(s) | 148, 1022, 1143, 1618 |
| BstX2I | RGATCY | 3 cut(s) | 467, 1085, 1212 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 580, 1544 |
| BstYI | RGATCY | 3 cut(s) | 467, 1085, 1212 |
| BstZ17I | GTATAC | 2 cut(s) | 147, 903 |
| Bsu15I | ATCGAT | 2 cut(s) | 91, 1167 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1254 |
| BsuRI | GGCC | 4 cut(s) | 212, 677, 1259, 1440 |
| BsuTUI | ATCGAT | 2 cut(s) | 91, 1167 |
| BtsCI | GGATG | 3 cut(s) | 894, 991, 1483 |
| BtsIMutI | CAGTG | 2 cut(s) | 126, 432 |
| Cac8I | GCNNGC | 3 cut(s) | 436, 694, 1027 |
| Cfr10I | RCCGGY | 1 cut(s) | 196 |
| Cfr13I | GGNCC | 4 cut(s) | 35, 550, 911, 1112 |
| ClaI | ATCGAT | 2 cut(s) | 91, 1167 |
| CseI | GACGC | 1 cut(s) | 50 |
| Csp6I | GTAC | 7 cut(s) | 194, 749, 872, 1016, 1222, 1331, 1652 |
| CspAI | ACCGGT | 1 cut(s) | 196 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 903, 938 |
| CviAII | CATG | 2 cut(s) | 79, 1372 |
| CviQI | GTAC | 7 cut(s) | 194, 749, 872, 1016, 1222, 1331, 1652 |
| DdeI | CTNAG | 9 cut(s) | 251, 396, 876, 897, 981, 1005, 1254, 1513, 1635 |
| DpnI | GATC | 4 cut(s) | 469, 1087, 1214, 1347 |
| DpnII | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 655 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 655 |
| EaeI | YGGCCR | 1 cut(s) | 210 |
| Eam1104I | CTCTTC | 1 cut(s) | 1146 |
| EarI | CTCTTC | 1 cut(s) | 1146 |
| Ecl136II | GAGCTC | 1 cut(s) | 24 |
| Eco130I | CCWWGG | 2 cut(s) | 1487, 1672 |
| Eco24I | GRGCYC | 1 cut(s) | 26 |
| Eco31I | GGTCTC | 1 cut(s) | 1527 |
| Eco32I | GATATC | 1 cut(s) | 1054 |
| Eco47I | GGWCC | 4 cut(s) | 35, 550, 911, 1112 |
| Eco53kI | GAGCTC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 3 cut(s) | 408, 540, 1032 |
| Eco81I | CCTNAGG | 1 cut(s) | 1254 |
| Eco88I | CYCGRG | 1 cut(s) | 882 |
| EcoICRI | GAGCTC | 1 cut(s) | 24 |
| EcoO109I | RGGNCCY | 1 cut(s) | 550 |
| EcoRI | GAATTC | 1 cut(s) | 634 |
| EcoRII | CCWGG | 2 cut(s) | 474, 1061 |
| EcoRV | GATATC | 1 cut(s) | 1054 |
| EcoT14I | CCWWGG | 2 cut(s) | 1487, 1672 |
| EcoT38I | GRGCYC | 1 cut(s) | 26 |
| ErhI | CCWWGG | 2 cut(s) | 1487, 1672 |
| FaeI | CATG | 2 cut(s) | 82, 1375 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 67, 99, 261, 293, 643, 675, 1347, 1379 |
| FaqI | GGGAC | 3 cut(s) | 536, 865, 1391 |
| FatI | CATG | 2 cut(s) | 78, 1371 |
| FauI | CCCGC | 2 cut(s) | 122, 480 |
| FauNDI | CATATG | 2 cut(s) | 1296, 1603 |
| FblI | GTMKAC | 2 cut(s) | 146, 902 |
| Fnu4HI | GCNGC | 4 cut(s) | 162, 1036, 1157, 1632 |
| FokI | GGATG | 3 cut(s) | 901, 998, 1470 |
| FriOI | GRGCYC | 1 cut(s) | 26 |
| Fsp4HI | GCNGC | 4 cut(s) | 162, 1036, 1157, 1632 |
| FspBI | CTAG | 4 cut(s) | 441, 1124, 1433, 1530 |
| GluI | GCNGC | 4 cut(s) | 162, 1036, 1157, 1632 |
| GsuI | CTGGAG | 2 cut(s) | 739, 1045 |
| HaeIII | GGCC | 4 cut(s) | 212, 677, 1259, 1440 |
| HapII | CCGG | 1 cut(s) | 197 |
| HgaI | GACGC | 1 cut(s) | 50 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 2 cut(s) | 82, 1375 |
| HincII | GTYRAC | 1 cut(s) | 1315 |
| HindII | GTYRAC | 1 cut(s) | 1315 |
| HinfI | GANTC | 9 cut(s) | 93, 106, 599, 878, 1003, 1246, 1273, 1520, 1540 |
| HpaII | CCGG | 1 cut(s) | 197 |
| HphI | GGTGA | 2 cut(s) | 211, 1387 |
| Hpy166II | GTNNAC | 4 cut(s) | 147, 903, 1315, 1333 |
| Hpy188I | TCNGA | 8 cut(s) | 111, 172, 559, 816, 1051, 1198, 1350, 1642 |
| Hpy188III | TCNNGA | 5 cut(s) | 38, 97, 218, 756, 882 |
| Hpy8I | GTNNAC | 4 cut(s) | 147, 903, 1315, 1333 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 21 |
| HpyAV | CCTTC | 9 cut(s) | 94, 232, 256, 300, 541, 564, 667, 1141, 1642 |
| HpyCH4III | ACNGT | 2 cut(s) | 121, 448 |
| HpyCH4IV | ACGT | 1 cut(s) | 1132 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1035 |
| HpyF3I | CTNAG | 9 cut(s) | 251, 396, 876, 897, 981, 1005, 1254, 1513, 1635 |
| HpySE526I | ACGT | 1 cut(s) | 1132 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 2 cut(s) | 82, 1375 |
| KpnI | GGTACC | 1 cut(s) | 1019 |
| Kzo9I | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| LguI | GCTCTTC | 1 cut(s) | 1146 |
| LmnI | GCTCC | 3 cut(s) | 21, 777, 1557 |
| Lsp1109I | GCAGC | 4 cut(s) | 148, 1022, 1143, 1618 |
| LweI | GCATC | 8 cut(s) | 163, 358, 840, 879, 1341, 1469, 1492, 1518 |
| MaeI | CTAG | 4 cut(s) | 441, 1124, 1433, 1530 |
| MaeII | ACGT | 1 cut(s) | 1132 |
| MaeIII | GTNAC | 6 cut(s) | 454, 513, 931, 1119, 1133, 1375 |
| MalI | GATC | 4 cut(s) | 469, 1087, 1214, 1347 |
| MbiI | CCGCTC | 1 cut(s) | 487 |
| MboI | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| MboII | GAAGA | 6 cut(s) | 214, 339, 415, 698, 1163, 1429 |
| MflI | RGATCY | 3 cut(s) | 467, 1085, 1212 |
| MhlI | GDGCHC | 1 cut(s) | 26 |
| MluCI | AATT | 8 cut(s) | 51, 343, 634, 968, 1261, 1323, 1340, 1410 |
| MlyI | GAGTC | 2 cut(s) | 887, 997 |
| MmeI | TCCRAC | 1 cut(s) | 283 |
| MspA1I | CMGCKG | 1 cut(s) | 1517 |
| MspCI | CTTAAG | 1 cut(s) | 641 |
| MspI | CCGG | 1 cut(s) | 197 |
| MspR9I | CCNGG | 2 cut(s) | 476, 1063 |
| Mva1269I | GAATGC | 1 cut(s) | 1560 |
| MvaI | CCWGG | 2 cut(s) | 476, 1063 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1035 |
| NdeI | CATATG | 2 cut(s) | 1296, 1603 |
| NdeII | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| NlaIII | CATG | 2 cut(s) | 82, 1375 |
| NlaIV | GGNNCC | 2 cut(s) | 552, 1017 |
| NmuCI | GTSAC | 2 cut(s) | 1133, 1375 |
| NspV | TTCGAA | 1 cut(s) | 836 |
| PciSI | GCTCTTC | 1 cut(s) | 1146 |
| PctI | GAATGC | 1 cut(s) | 1560 |
| PfeI | GAWTC | 7 cut(s) | 93, 106, 599, 1246, 1273, 1520, 1540 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 386, 1025 |
| PfoI | TCCNGGA | 1 cut(s) | 1061 |
| PinAI | ACCGGT | 1 cut(s) | 196 |
| PkrI | GCNGC | 4 cut(s) | 163, 1037, 1158, 1633 |
| PleI | GAGTC | 2 cut(s) | 886, 997 |
| PpsI | GAGTC | 2 cut(s) | 886, 997 |
| PpuMI | RGGWCCY | 1 cut(s) | 550 |
| Psp124BI | GAGCTC | 1 cut(s) | 26 |
| Psp5II | RGGWCCY | 1 cut(s) | 550 |
| Psp6I | CCWGG | 2 cut(s) | 474, 1061 |
| PspGI | CCWGG | 2 cut(s) | 474, 1061 |
| PspN4I | GGNNCC | 2 cut(s) | 552, 1017 |
| PspPI | GGNCC | 4 cut(s) | 35, 550, 911, 1112 |
| PspPPI | RGGWCCY | 1 cut(s) | 550 |
| PsuI | RGATCY | 3 cut(s) | 467, 1085, 1212 |
| PvuII | CAGCTG | 1 cut(s) | 1517 |
| RsaI | GTAC | 7 cut(s) | 195, 750, 873, 1017, 1223, 1332, 1653 |
| RsaNI | GTAC | 7 cut(s) | 194, 749, 872, 1016, 1222, 1331, 1652 |
| SacI | GAGCTC | 1 cut(s) | 26 |
| SapI | GCTCTTC | 1 cut(s) | 1146 |
| SatI | GCNGC | 4 cut(s) | 162, 1036, 1157, 1632 |
| Sau3AI | GATC | 4 cut(s) | 467, 1085, 1212, 1345 |
| Sau96I | GGNCC | 4 cut(s) | 35, 550, 911, 1112 |
| ScaI | AGTACT | 2 cut(s) | 750, 1223 |
| SchI | GAGTC | 2 cut(s) | 887, 997 |
| ScrFI | CCNGG | 2 cut(s) | 476, 1063 |
| SduI | GDGCHC | 1 cut(s) | 26 |
| SfaNI | GCATC | 8 cut(s) | 163, 358, 840, 879, 1341, 1469, 1492, 1518 |
| SfcI | CTRYAG | 1 cut(s) | 666 |
| SfuI | TTCGAA | 1 cut(s) | 836 |
| SinI | GGWCC | 4 cut(s) | 35, 550, 911, 1112 |
| SmlI | CTYRAG | 3 cut(s) | 641, 1401, 1625 |
| SmoI | CTYRAG | 3 cut(s) | 641, 1401, 1625 |
| SpeI | ACTAGT | 1 cut(s) | 1432 |
| Sse9I | AATT | 8 cut(s) | 51, 343, 634, 968, 1261, 1323, 1340, 1410 |
| SsiI | CCGC | 2 cut(s) | 115, 487 |
| SspMI | CTAG | 4 cut(s) | 441, 1124, 1433, 1530 |
| SstI | GAGCTC | 1 cut(s) | 26 |
| StyD4I | CCNGG | 2 cut(s) | 474, 1061 |
| StyI | CCWWGG | 2 cut(s) | 1487, 1672 |
| TaaI | ACNGT | 2 cut(s) | 121, 448 |
| TaiI | ACGT | 1 cut(s) | 1135 |
| TaqI | TCGA | 6 cut(s) | 91, 350, 629, 836, 1167, 1344 |
| TasI | AATT | 8 cut(s) | 51, 343, 634, 968, 1261, 1323, 1340, 1410 |
| TatI | WGTACW | 3 cut(s) | 748, 1221, 1330 |
| TfiI | GAWTC | 7 cut(s) | 93, 106, 599, 1246, 1273, 1520, 1540 |
| TscAI | CASTG | 2 cut(s) | 126, 432 |
| TseFI | GTSAC | 2 cut(s) | 1133, 1375 |
| TseI | GCWGC | 4 cut(s) | 161, 1035, 1156, 1631 |
| Tsp45I | GTSAC | 2 cut(s) | 1133, 1375 |
| TspDTI | ATGAA | 3 cut(s) | 612, 1160, 1437 |
| TspGWI | ACGGA | 1 cut(s) | 34 |
| TspRI | CASTG | 2 cut(s) | 126, 432 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 386, 1025 |
| Vha464I | CTTAAG | 1 cut(s) | 641 |
| VpaK11BI | GGWCC | 4 cut(s) | 35, 550, 911, 1112 |
| XapI | RAATTY | 3 cut(s) | 634, 968, 1340 |
| XmiI | GTMKAC | 2 cut(s) | 146, 902 |
| XspI | CTAG | 4 cut(s) | 441, 1124, 1433, 1530 |
| ZrmI | AGTACT | 2 cut(s) | 750, 1223 |