Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007438

Physical Location & Seq

Genomic Coordinates Forward (+)

19143444 .. 19149564

Gene Structure 6121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G015420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGCGTCGTTTAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTCTGTGTGAATTGGATCAGCGACGGAGCTCTGCCACAAAAGACACCAACAAACTCGGGGCTTTCAAGTCAAACGTAAGCATGGTCCTGAATCGATTGGGAAAAGAGAATCAAACACACACAGGTGTTGGTGCTAAAAATTTTAAGGTGTATACTGAAAAAGGAACTGCTAAACCTGATGTTGATAGCAGTTTTCGTTGTTCTTGTGCTTTGAATTGCAGGAGTTCTGTGCCATTGAAGAAATCTATTATTGACAATAAAAGTGTTGTAAAGGCGGGTTTGTTCAGTATGGAGAAGAGCAAAGCCACACCTGGTAGTGCTGCAACTGGAAATGTTGGAAGAAGAGCATTAGCCGATGTTAGCAATGTCAAAGGCAATTCTTCTAGGGCTGTAGGGGGAGATGCCTCTAAACCAATGGTTGGTAAAACTGAGAGAAAGAAGTCTCTGCAACGTGGTACAGGCACCAGGAATGTGAATGTCACATCAAGGAGATCCCTCCTGGGAAAAGAGCGGGAAAGCAGTCAAGGTGTTTCTGTGTTGCAGACTACAAAGAGAGGTATTAAAGATTTGAAGGCCCCTTCAGAAAATCAAAAGACCAAAGCTATGGGTTTAAGCAATGAATCTAGGGCTGCAGATAGCAGGAGGACTTCAAGGAACTCACTTAAGCTGACAAGGCTGTCTTTACCAGTAGTGAAGGTCAACCAAGAAGAAGCAAGTATTTCAAAGGAAAATGCTGGAAGTCCTGTTAAGGCTAAAGTTGGCAAGAAATTAGTCTCCAGAGTGAGCAATGATATTAGGAGTTATGTATCAAGGAATCGAGTGAGTGATGGCTTTCTGATTAGGGGTCAAAGGAATTCAAATGTTCGCGTGATGCCAAGAAAATCTACCAAATCCACCCTGAAGGTTCCCGAGTCCGGAGGGATGCAACCTAAGTACACATCTGGTCCAAATAAGTTGGCTTCTGATGTTAAGCAAGAAACGACTCAGGGAGAGGTACCATCTGATGGCAACTGCAGCAAAACTGCTTCAGATATCATCTCCAGGAGAAACTCAAGTAGGAGGAGATCTTATACTTCTCTGCTGATGACTGGATCAAAGTTACTAGAGGAACGTGTCGAAGCTATGAAGGAAGAGCTGCCAAGTATTGATAATCATTGCAATCAACTGGAAGTTTCTGATTATGTTGATGAGATCTATCAGTACTATTGGATTTATGAGGCACAGAATCCACCTCGGGCAAATTTCCTGTTGATTCAGGCAGACATTACTCCTCATATGCGCGGCATATTGGTCAATTGGTTAATTGAAGTACACTTCAAATTTGATCTGATGCAAGAAACACTTTATCTCATGGTGACATTGTTAGACCAATATCTTTCTCAAGTCCCAATTAAGAAGAATGAAATGCAATTAGTTGGTCTTACTGCACTCTTGTTGGCATCAAAGTATGAGGACTTTTGGCATCCAAGGGTCAAAGAGTTGATTAGCATCTCAGCTGAGTCATACACTAGAGACCAGGTGCTTGAAATGGAGAGGCTCATTCTTAAAAAGTTGAAGTTTCGTCTTAACACACCTACTCCATATGTCTTTATGTTGAGATTTCTCAAGGCTGCTCAGTCAGATAAAAAGCTTGAACATTTGGCCTTCTACCTCATCGAATTGTGTCTGGTTGAGTATGAACCTATAATGGTCAAGCCCTCATTGCTATGTGCAGCAGCCATCTATGTTGCAAGGTGCACTCTGCAGATTACTCCAGCTTGGACCCCCCTGCTTTGCAAACATGCTCGTTACGAAGTGTCTCAAATCAGAGACTGTGCAGAGATGATCTTAAGATTTCAAAAAGCTGCTGGAGTAGGAAAGTTGAAGGTCACATACGAGAAATACATGAGGTCTGATCTCAGTCGTGTTGCAGCAATTGAACCCTTGGAGAGGCTTCCCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

662

Amino Acids

74.38

Weight (kDa)

9.81

Isoelectric Point (pI)

34.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	412 - 538	2.8e-41	Cyclin, N-terminal domain
Cyclin_C	PF02984	540 - 656	4.8e-33	Cyclin, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16330
fragaria_vesca	FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512
malus_domestica	MD05G1264400.v1.1 MD10G1212300.v1.1
prunus_persica	Prupe.4G130400_v2.0.a1 Prupe.4G130400_v2.0.a1 Prupe.4G130400_v2.0.a1
pyrus_communis	pycom05g21260 pycom10g17990
rosa_chinensis	RchiOBHm_Chr5g0023901
rosa_laevigata	RLG00000032747
rosa_multiflora	Rmu_sc0004175.1_g000014 Rmu_sc0005837.1_g000002
rosa_roxburghii	Rroxscaffold_1G00055310
rosa_rugosa	Rorug05G0080200
rosa_samantha	Rh5AG170500 Rh5BG167600 Rh5CG183100 Rh5DG169700
rosa_wichuraiana	Rw5G015420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	721
Acc65I	GGTACC	1 cut(s)	1039
AccB1I	GGYRCC	2 cut(s)	506, 1039
AccB7I	CCANNNNNTGG	2 cut(s)	464, 1049
AccBSI	CCGCTC	1 cut(s)	556
AccI	GTMKAC	1 cut(s)	197
AccII	CGCG	2 cut(s)	912, 1326
AccIII	TCCGGA	1 cut(s)	959
AciI	CCGC	3 cut(s)	320, 556, 1326
AclWI	GGATC	3 cut(s)	69, 531, 1144
AcsI	RAATTY	4 cut(s)	184, 898, 1285, 1364
AcuI	CTGAAG	3 cut(s)	609, 965, 1056
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	5 cut(s)	502, 980, 1041, 1247, 1356
AfiI	CCNNNNNNNGG	4 cut(s)	464, 959, 1049, 1974
AflII	CTTAAG	2 cut(s)	707, 1873
AflIII	ACRYGT	1 cut(s)	1156
AjnI	CCWGG	5 cut(s)	355, 509, 543, 1085, 1560
AleI	CACNNNNGTG	1 cut(s)	168
AluBI	AGCT	9 cut(s)	75, 647, 712, 1166, 1180, 1541, 1675, 1802, 1889
AluI	AGCT	9 cut(s)	75, 647, 712, 1166, 1180, 1541, 1675, 1802, 1889
Alw21I	GWGCWC	2 cut(s)	77, 1784
Alw26I	GTCTC	6 cut(s)	51, 492, 823, 1551, 1848, 1848
Alw44I	GTGCAC	1 cut(s)	1780
AlwI	GGATC	3 cut(s)	69, 531, 1144
AlwNI	CAGNNNCTG	1 cut(s)	1857
Ama87I	CYCGRG	3 cut(s)	101, 953, 1278
Aor13HI	TCCGGA	1 cut(s)	959
AoxI	GGCC	2 cut(s)	618, 1686
ApaLI	GTGCAC	1 cut(s)	1780
ApeKI	GCWGC	9 cut(s)	365, 674, 1059, 1180, 1655, 1757, 1760, 1889, 1955
ApoI	RAATTY	4 cut(s)	184, 898, 1285, 1364
Asp718I	GGTACC	1 cut(s)	1039
AspLEI	GCGC	1 cut(s)	1326
AspS9I	GGNCC	4 cut(s)	130, 619, 989, 1806
AsuHPI	GGTGA	1 cut(s)	1411
AvaI	CYCGRG	3 cut(s)	101, 953, 1278
AvaII	GGWCC	3 cut(s)	130, 989, 1806
BaeGI	GKGCMC	1 cut(s)	1784
BanI	GGYRCC	2 cut(s)	506, 1039
BanII	GRGCYC	1 cut(s)	77
BarI	GAAGNNNNNNTAC	2 cut(s)	1901, 1933
Bbv12I	GWGCWC	2 cut(s)	77, 1784
BbvI	GCAGC	9 cut(s)	352, 661, 1071, 1167, 1642, 1769, 1772, 1876, 1967
BccI	CCATC	4 cut(s)	866, 1043, 1051, 1772
BciT130I	CCWGG	5 cut(s)	357, 511, 545, 1087, 1562
BcoDI	GTCTC	6 cut(s)	51, 492, 823, 1551, 1848, 1848
BfaI	CTAG	4 cut(s)	429, 669, 1148, 1554
BfmI	CTRYAG	4 cut(s)	435, 675, 1057, 1787
BfrI	CTTAAG	2 cut(s)	707, 1873
BglII	AGATCT	2 cut(s)	1109, 1236
BmcAI	AGTACT	1 cut(s)	1247
Bme1390I	CCNGG	5 cut(s)	357, 511, 545, 1087, 1562
Bme18I	GGWCC	3 cut(s)	130, 989, 1806
BmeT110I	CYCGRG	3 cut(s)	101, 953, 1278
BmgT120I	GGNCC	4 cut(s)	130, 619, 989, 1806
BmiI	GGNNCC	5 cut(s)	508, 621, 951, 1041, 1808
BmrFI	CCNGG	5 cut(s)	357, 511, 545, 1087, 1562
BmsI	GCATC	7 cut(s)	436, 906, 957, 1365, 1493, 1516, 1542
BpmI	CTGGAG	4 cut(s)	805, 1069, 1782, 1914
BpuEI	CTTGAG	3 cut(s)	1081, 1410, 1634
Bsa29I	ATCGAT	1 cut(s)	139
BsaBI	GATNNNNATC	1 cut(s)	1532
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1551
BsaJI	CCNNGG	4 cut(s)	544, 1277, 1511, 1968
BsaWI	WCCGGW	1 cut(s)	959
BsaXI	ACNNNNNCTCC	2 cut(s)	1606, 1636
Bsc4I	CCNNNNNNNGG	4 cut(s)	464, 959, 1049, 1974
Bse1I	ACTGG	4 cut(s)	376, 731, 1138, 1215
Bse3DI	GCAATG	5 cut(s)	415, 667, 838, 1198, 1745
Bse8I	GATNNNNATC	1 cut(s)	1532
BseAI	TCCGGA	1 cut(s)	959
BseBI	CCWGG	5 cut(s)	357, 511, 545, 1087, 1562
BseCI	ATCGAT	1 cut(s)	139
BseDI	CCNNGG	4 cut(s)	544, 1277, 1511, 1968
BseGI	GGATG	2 cut(s)	972, 1507
BseJI	GATNNNNATC	1 cut(s)	1532
BseLI	CCNNNNNNNGG	4 cut(s)	464, 959, 1049, 1974
BseMI	GCAATG	5 cut(s)	415, 667, 838, 1198, 1745
BseMII	CTCAG	6 cut(s)	465, 1043, 1533, 1551, 1673, 1957
BseNI	ACTGG	4 cut(s)	376, 731, 1138, 1215
BseRI	GAGGAG	2 cut(s)	1120, 1305
BseSI	GKGCMC	1 cut(s)	1784
BseXI	GCAGC	9 cut(s)	352, 661, 1071, 1167, 1642, 1769, 1772, 1876, 1967
BsgI	GTGCAG	3 cut(s)	1455, 1776, 1881
Bsh1236I	CGCG	2 cut(s)	912, 1326
BshFI	GGCC	2 cut(s)	620, 1688
BshNI	GGYRCC	2 cut(s)	506, 1039
BshVI	ATCGAT	1 cut(s)	139
BsiHKAI	GWGCWC	2 cut(s)	77, 1784
BsiHKCI	CYCGRG	3 cut(s)	101, 953, 1278
BsiSI	CCGG	1 cut(s)	960
BslFI	GGGAC	1 cut(s)	1415
BslI	CCNNNNNNNGG	4 cut(s)	464, 959, 1049, 1974
BsmAI	GTCTC	6 cut(s)	51, 492, 823, 1551, 1848, 1848
BsmFI	GGGAC	1 cut(s)	1415
BsnI	GGCC	2 cut(s)	620, 1688
Bso31I	GGTCTC	1 cut(s)	1551
BsoBI	CYCGRG	3 cut(s)	101, 953, 1278
Bsp1286I	GDGCHC	2 cut(s)	77, 1784
Bsp13I	TCCGGA	1 cut(s)	959
Bsp143I	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
BspACI	CCGC	3 cut(s)	320, 556, 1326
BspANI	GGCC	2 cut(s)	620, 1688
BspCNI	CTCAG	6 cut(s)	466, 1042, 1534, 1550, 1672, 1956
BspDI	ATCGAT	1 cut(s)	139
BspEI	TCCGGA	1 cut(s)	959
BspFNI	CGCG	2 cut(s)	912, 1326
BspLI	GGNNCC	5 cut(s)	508, 621, 951, 1041, 1808
BspMAI	CTGCAG	3 cut(s)	679, 1061, 1791
BspPI	GGATC	3 cut(s)	69, 531, 1144
BspQI	GCTCTTC	3 cut(s)	335, 382, 1170
BspT107I	GGYRCC	2 cut(s)	506, 1039
BspTI	CTTAAG	2 cut(s)	707, 1873
BspTNI	GGTCTC	1 cut(s)	1551
BsrBI	CCGCTC	1 cut(s)	556
BsrDI	GCAATG	5 cut(s)	415, 667, 838, 1198, 1745
BsrI	ACTGG	4 cut(s)	376, 731, 1138, 1215
BssECI	CCNNGG	4 cut(s)	544, 1277, 1511, 1968
BssMI	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
BssNAI	GTATAC	1 cut(s)	198
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	1511, 1968
Bst1107I	GTATAC	1 cut(s)	198
Bst2UI	CCWGG	5 cut(s)	357, 511, 545, 1087, 1562
Bst4CI	ACNGT	1 cut(s)	1859
Bst6I	CTCTTC	3 cut(s)	335, 382, 1170
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	2 cut(s)	707, 1873
BstDEI	CTNAG	7 cut(s)	474, 975, 1029, 1537, 1542, 1659, 1943
BstENI	CCTNNNNNAGG	1 cut(s)	1972
BstF5I	GGATG	2 cut(s)	972, 1507
BstFNI	CGCG	2 cut(s)	912, 1326
BstHHI	GCGC	1 cut(s)	1326
BstKTI	GATC	8 cut(s)	64, 539, 1112, 1139, 1239, 1372, 1872, 1942
BstMAI	GTCTC	6 cut(s)	51, 492, 823, 1551, 1848, 1848
BstMBI	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
BstMWI	GCNNNNNNNGC	3 cut(s)	718, 1059, 1747
BstNI	CCWGG	5 cut(s)	357, 511, 545, 1087, 1562
BstNSI	RCATGY	1 cut(s)	1829
BstSCI	CCNGG	5 cut(s)	355, 509, 543, 1085, 1560
BstSFI	CTRYAG	4 cut(s)	435, 675, 1057, 1787
BstSLI	GKGCMC	1 cut(s)	1784
BstUI	CGCG	2 cut(s)	912, 1326
BstV1I	GCAGC	9 cut(s)	352, 661, 1071, 1167, 1642, 1769, 1772, 1876, 1967
BstX2I	RGATCY	3 cut(s)	536, 1109, 1236
BstXI	CCANNNNNNTGG	1 cut(s)	649
BstYI	RGATCY	3 cut(s)	536, 1109, 1236
BstZ17I	GTATAC	1 cut(s)	198
Bsu15I	ATCGAT	1 cut(s)	139
BsuRI	GGCC	2 cut(s)	620, 1688
BsuTUI	ATCGAT	1 cut(s)	139
BtsCI	GGATG	2 cut(s)	972, 1507
CaiI	CAGNNNCTG	1 cut(s)	1857
CfoI	GCGC	1 cut(s)	1326
Cfr13I	GGNCC	4 cut(s)	130, 619, 989, 1806
ClaI	ATCGAT	1 cut(s)	139
CsiI	ACCWGGT	2 cut(s)	355, 1560
Csp6I	GTAC	5 cut(s)	501, 979, 1040, 1246, 1355
CviAII	CATG	4 cut(s)	127, 1396, 1826, 1930
CviQI	GTAC	5 cut(s)	501, 979, 1040, 1246, 1355
DdeI	CTNAG	7 cut(s)	474, 975, 1029, 1537, 1542, 1659, 1943
DpnI	GATC	8 cut(s)	63, 538, 1111, 1138, 1238, 1371, 1871, 1941
DpnII	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
DrdI	GACNNNNNNGTC	1 cut(s)	721
DseDI	GACNNNNNNGTC	1 cut(s)	721
Eam1104I	CTCTTC	3 cut(s)	335, 382, 1170
EarI	CTCTTC	3 cut(s)	335, 382, 1170
Ecl136II	GAGCTC	1 cut(s)	75
Eco130I	CCWWGG	2 cut(s)	1511, 1968
Eco24I	GRGCYC	1 cut(s)	77
Eco31I	GGTCTC	1 cut(s)	1551
Eco32I	GATATC	1 cut(s)	1078
Eco47I	GGWCC	3 cut(s)	130, 989, 1806
Eco53kI	GAGCTC	1 cut(s)	75
Eco57I	CTGAAG	3 cut(s)	609, 965, 1056
Eco88I	CYCGRG	3 cut(s)	101, 953, 1278
EcoICRI	GAGCTC	1 cut(s)	75
EcoNI	CCTNNNNNAGG	1 cut(s)	1972
EcoO109I	RGGNCCY	1 cut(s)	619
EcoRI	GAATTC	1 cut(s)	898
EcoRII	CCWGG	5 cut(s)	355, 509, 543, 1085, 1560
EcoRV	GATATC	1 cut(s)	1078
EcoT14I	CCWWGG	2 cut(s)	1511, 1968
EcoT38I	GRGCYC	1 cut(s)	77
ErhI	CCWWGG	2 cut(s)	1511, 1968
FaeI	CATG	4 cut(s)	130, 1399, 1829, 1933
FalI	AAGNNNNNCTT	4 cut(s)	709, 741, 1371, 1403
FaqI	GGGAC	1 cut(s)	1415
FatI	CATG	4 cut(s)	126, 1395, 1825, 1929
FauI	CCCGC	2 cut(s)	313, 549
FauNDI	CATATG	2 cut(s)	1320, 1627
FblI	GTMKAC	1 cut(s)	197
FokI	GGATG	2 cut(s)	979, 1494
FriOI	GRGCYC	1 cut(s)	77
FspBI	CTAG	4 cut(s)	429, 669, 1148, 1554
GlaI	GCGC	1 cut(s)	1325
GsuI	CTGGAG	4 cut(s)	805, 1069, 1782, 1914
HaeIII	GGCC	2 cut(s)	620, 1688
HapII	CCGG	1 cut(s)	960
HhaI	GCGC	1 cut(s)	1326
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	4 cut(s)	130, 1399, 1829, 1933
Hin6I	GCGC	1 cut(s)	1324
HinP1I	GCGC	1 cut(s)	1324
HincII	GTYRAC	1 cut(s)	745
HindII	GTYRAC	1 cut(s)	745
HindIII	AAGCTT	1 cut(s)	1673
HinfI	GANTC	9 cut(s)	136, 154, 665, 859, 956, 1027, 1270, 1297, 1544
HpaII	CCGG	1 cut(s)	960
HphI	GGTGA	1 cut(s)	1411
Hpy166II	GTNNAC	5 cut(s)	198, 745, 981, 1357, 1782
Hpy188III	TCNNGA	4 cut(s)	133, 822, 953, 960
Hpy8I	GTNNAC	5 cut(s)	198, 745, 981, 1357, 1782
Hpy99I	CGWCG	2 cut(s)	10, 72
HpyAV	CCTTC	7 cut(s)	610, 633, 733, 940, 1165, 1699, 1903
HpyCH4III	ACNGT	1 cut(s)	1859
HpyCH4IV	ACGT	3 cut(s)	120, 496, 1156
HpyF10VI	GCNNNNNNNGC	3 cut(s)	718, 1059, 1747
HpyF3I	CTNAG	7 cut(s)	474, 975, 1029, 1537, 1542, 1659, 1943
HpySE526I	ACGT	3 cut(s)	120, 496, 1156
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	4 cut(s)	130, 1399, 1829, 1933
HspAI	GCGC	1 cut(s)	1324
Kpn2I	TCCGGA	1 cut(s)	959
KpnI	GGTACC	1 cut(s)	1043
Kzo9I	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
LguI	GCTCTTC	3 cut(s)	335, 382, 1170
LmnI	GCTCC	1 cut(s)	72
Lsp1109I	GCAGC	9 cut(s)	352, 661, 1071, 1167, 1642, 1769, 1772, 1876, 1967
LweI	GCATC	7 cut(s)	436, 906, 957, 1365, 1493, 1516, 1542
MabI	ACCWGGT	2 cut(s)	355, 1560
MaeI	CTAG	4 cut(s)	429, 669, 1148, 1554
MaeII	ACGT	3 cut(s)	120, 496, 1156
MaeIII	GTNAC	5 cut(s)	523, 1143, 1399, 1832, 1912
MalI	GATC	8 cut(s)	63, 538, 1111, 1138, 1238, 1371, 1871, 1941
MbiI	CCGCTC	1 cut(s)	556
MboI	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
MboII	GAAGA	8 cut(s)	295, 352, 396, 399, 417, 764, 1187, 1453
MfeI	CAATTG	2 cut(s)	1339, 1959
MflI	RGATCY	3 cut(s)	536, 1109, 1236
MhlI	GDGCHC	2 cut(s)	77, 1784
MlyI	GAGTC	3 cut(s)	965, 1021, 1553
MmeI	TCCRAC	1 cut(s)	361
MroI	TCCGGA	1 cut(s)	959
MslI	CAYNNNNRTG	2 cut(s)	168, 1750
MspA1I	CMGCKG	1 cut(s)	1541
MspCI	CTTAAG	2 cut(s)	707, 1873
MspI	CCGG	1 cut(s)	960
MspR9I	CCNGG	5 cut(s)	357, 511, 545, 1087, 1562
MunI	CAATTG	2 cut(s)	1339, 1959
MvaI	CCWGG	5 cut(s)	357, 511, 545, 1087, 1562
MvnI	CGCG	2 cut(s)	912, 1326
MwoI	GCNNNNNNNGC	3 cut(s)	718, 1059, 1747
NdeI	CATATG	2 cut(s)	1320, 1627
NdeII	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
NlaIII	CATG	4 cut(s)	130, 1399, 1829, 1933
NlaIV	GGNNCC	5 cut(s)	508, 621, 951, 1041, 1808
NmuCI	GTSAC	3 cut(s)	523, 1399, 1912
NspI	RCATGY	1 cut(s)	1829
OliI	CACNNNNGTG	1 cut(s)	168
PciSI	GCTCTTC	3 cut(s)	335, 382, 1170
PfeI	GAWTC	6 cut(s)	136, 154, 665, 859, 1270, 1297
PflMI	CCANNNNNTGG	2 cut(s)	464, 1049
PfoI	TCCNGGA	1 cut(s)	1085
PleI	GAGTC	3 cut(s)	964, 1021, 1552
PpsI	GAGTC	3 cut(s)	964, 1021, 1552
Psp124BI	GAGCTC	1 cut(s)	77
Psp6I	CCWGG	5 cut(s)	355, 509, 543, 1085, 1560
PspGI	CCWGG	5 cut(s)	355, 509, 543, 1085, 1560
PspN4I	GGNNCC	5 cut(s)	508, 621, 951, 1041, 1808
PspPI	GGNCC	4 cut(s)	130, 619, 989, 1806
PstI	CTGCAG	3 cut(s)	679, 1061, 1791
PstNI	CAGNNNCTG	1 cut(s)	1857
PsuI	RGATCY	3 cut(s)	536, 1109, 1236
PvuII	CAGCTG	1 cut(s)	1541
RsaI	GTAC	5 cut(s)	502, 980, 1041, 1247, 1356
RsaNI	GTAC	5 cut(s)	501, 979, 1040, 1246, 1355
RseI	CAYNNNNRTG	2 cut(s)	168, 1750
SacI	GAGCTC	1 cut(s)	77
SapI	GCTCTTC	3 cut(s)	335, 382, 1170
Sau3AI	GATC	8 cut(s)	61, 536, 1109, 1136, 1236, 1369, 1869, 1939
Sau96I	GGNCC	4 cut(s)	130, 619, 989, 1806
ScaI	AGTACT	1 cut(s)	1247
SchI	GAGTC	3 cut(s)	965, 1021, 1553
ScrFI	CCNGG	5 cut(s)	357, 511, 545, 1087, 1562
SduI	GDGCHC	2 cut(s)	77, 1784
SexAI	ACCWGGT	2 cut(s)	355, 1560
SfaNI	GCATC	7 cut(s)	436, 906, 957, 1365, 1493, 1516, 1542
SfcI	CTRYAG	4 cut(s)	435, 675, 1057, 1787
SinI	GGWCC	3 cut(s)	130, 989, 1806
SmiMI	CAYNNNNRTG	2 cut(s)	168, 1750
SmlI	CTYRAG	5 cut(s)	707, 1096, 1425, 1649, 1873
SmoI	CTYRAG	5 cut(s)	707, 1096, 1425, 1649, 1873
SsiI	CCGC	3 cut(s)	320, 556, 1326
SspMI	CTAG	4 cut(s)	429, 669, 1148, 1554
SstI	GAGCTC	1 cut(s)	77
StyD4I	CCNGG	5 cut(s)	355, 509, 543, 1085, 1560
StyI	CCWWGG	2 cut(s)	1511, 1968
TaaI	ACNGT	1 cut(s)	1859
TaiI	ACGT	3 cut(s)	123, 499, 1159
TaqI	TCGA	4 cut(s)	139, 862, 1161, 1701
TatI	WGTACW	3 cut(s)	978, 1245, 1354
TauI	GCSGC	1 cut(s)	1329
TfiI	GAWTC	6 cut(s)	136, 154, 665, 859, 1270, 1297
TseFI	GTSAC	3 cut(s)	523, 1399, 1912
TseI	GCWGC	9 cut(s)	365, 674, 1059, 1180, 1655, 1757, 1760, 1889, 1955
Tsp45I	GTSAC	3 cut(s)	523, 1399, 1912
TspDTI	ATGAA	4 cut(s)	678, 1184, 1461, 1737
TspGWI	ACGGA	1 cut(s)	85
Van91I	CCANNNNNTGG	2 cut(s)	464, 1049
Vha464I	CTTAAG	2 cut(s)	707, 1873
VneI	GTGCAC	1 cut(s)	1780
VpaK11BI	GGWCC	3 cut(s)	130, 989, 1806
XagI	CCTNNNNNAGG	1 cut(s)	1972
XapI	RAATTY	4 cut(s)	184, 898, 1285, 1364
XceI	RCATGY	1 cut(s)	1829
XmiI	GTMKAC	1 cut(s)	197
XspI	CTAG	4 cut(s)	429, 669, 1148, 1554
ZrmI	AGTACT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.