Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007438

Physical Location & Seq

Genomic Coordinates Forward (+)

18300253 .. 18309388

Gene Structure 9136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG183100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCGTCGTTTAAGCGACGGAGCTCTGCCACAAAAGACACCAACAAACTCGGGGCTTTCAAGTCAAACGTAAGCATGGTCCTGAATCGATTGGGCAAAGAGAATCAGACACACACAGTTGGTGCTAAAAATTTAAAGGTGTATACTGAAAAAGGAACTGCTAAACCTGATGTTGATAGCAGGAGTTCTGTGCCATTGAAGAAACCAGCTATTCTTGACAATAAAAGTGTTGTAAAGGCGGGTTTGTTCAGTATGGAGAAGAGCAAAGCCACACTTGGTAGTGTTGCAACTGGAAATGTTGGAAGAAGAGCATTAGCCGATGTTAGCAATGTCAAAGGCAATTCTTCTAGAGTTGTAGGTGGAGATGCCTCTAAACCAATGGTTGGTAAAACTGAGAGAAAGAAGTCTCTGCAACGGCCTTCAGTGGGTACAGGCACCAGGAATGTGAATGTCACATCAAGGAGATCCCTCCTGGGAAAAGAGCGGGAAAGCAGTCAAGGTGTTTCTGTGTTGCAGACTACAAAGAGAGGTATTAAAGATTTGAAGGCCCCTTCAGAAAATCAAAAGACCAAAGCTATGGGTTTAAGCAATGAATCTAGGGCTGCAGATAGCAGGAGGACTTTGAGGAATTCACTTAAGCTGACAAGGTTGTCTTTACCAGAAGTGAAGGTCAACCAAGAAGAAGCAAGTATTTCAAAGGAAAATGCTGGAAGTCCTGGTAAGGCTAAAGTTGGCAAGAAACTAGTCTCCAGAGTGAGCAATGATATTAGGAGCTATGTATCAAGGAATCGAGTGAGTGATGGCTTTCTGATTAGGGGTCAAAAGAATTCAAATGTTCGTGTGATGCCAAGAAAATCTACCAAATCCACCCTGAAGGTTCCCAAGTCCGGAGGGATGCAACCTAAGTACACATCTGGTCCAAATAAGTTGGCTTCTGTTACTGCAACTAAATCTAAAACCCAAAAAGCTGTTGAATTTGTAATTGCTGAGGATGTTAAGCAAGAAACGACTCAGGGAGAGGTACCATCTGATGGCAACTGCAGCAAAACTGCTTCAGATATCATCTCCAGGAGAAACTCAAGTCGGAGGAGATCTTATACGTCTCTGCTGATGACTGGATCAAAGTTACTAGAGGAACGTGTCGAAGCTATGAAGGAAGAGCTGCCAAGTATTGATAATCATTGCAATCAACTGGAAGTTTCTGATTATGTTGATGAGATCTATCAGTACTATTGGATTTATGAGGCACAGAATCCACCTCGGGCAAATTTCCTGTTGATTCAGGCAGACATTACTCCTCATATGCGCGGCATATTGGTCAATTGGTTAATTGAAGTACACTTCAAATTTGATCTGATGCAAGAAACACTTTATCTCATGGTGACATTGTTAGACCAATATCTTTCTCAAGTCCCAATTAAGAAGAATGAAATGCAATTAGTTGGTCTTACTGCACTTTTGTTGGCATCAAAGTATGAGGACTTTTGGCATCCAAGGGTCAAAGAGTTGATTAGCATCTCAGCTGAGTCATACACTAGAGACCAGGTGCTTGAAATGGAGAGGCTCATTCTTAAAAAGTTGAAGTTTCGTCTTAACACACCTACTCCATATGTCTTTATGTTGAGATTTCTCAAGGCTGCTCAGTCAGATAAAAAGCTTGAACATTTGGCCTTCTACCTCATCGAATTGTGTCTGGTTGAGTATGAACCTATAATGGTCAAGCCCTCATTGCTATGTGCAGCAGCCATCTATGTTGCAAGGTGCACTCTGCAGATTACTCCAGCTTGGACCCCCCTGCTTTGCAAACATGCTCGTTACGAAGTGTCTCAAATCAGAGACTGTGCAGAGATGATCTTAAGATTTCAAAAAGCTGCTGGAGTAGGAAAGTTGAAGGTCACATACGAGAAATACATGAGGACTGATCTCAGTCGTGTTGCAGCAATTGAACCCTTGGAGAGGCTTCCCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

656

Amino Acids

73.4

Weight (kDa)

9.9

Isoelectric Point (pI)

34.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	406 - 532	2.8e-41	Cyclin, N-terminal domain
Cyclin_C	PF02984	534 - 650	8.9e-33	Cyclin, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16330
fragaria_vesca	FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512 FvH4_3g14512
malus_domestica	MD05G1264400.v1.1 MD10G1212300.v1.1
prunus_persica	Prupe.4G130400_v2.0.a1 Prupe.4G130400_v2.0.a1 Prupe.4G130400_v2.0.a1
pyrus_communis	pycom05g21260 pycom10g17990
rosa_chinensis	RchiOBHm_Chr5g0023901
rosa_laevigata	RLG00000032747
rosa_multiflora	Rmu_sc0004175.1_g000014 Rmu_sc0005837.1_g000002
rosa_roxburghii	Rroxscaffold_1G00055310
rosa_rugosa	Rorug05G0080200
rosa_samantha	Rh5AG170500 Rh5BG167600 Rh5CG183100 Rh5DG169700
rosa_wichuraiana	Rw5G015420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	649
Acc65I	GGTACC	1 cut(s)	1021
AccB1I	GGYRCC	2 cut(s)	434, 1021
AccB7I	CCANNNNNTGG	2 cut(s)	383, 1031
AccBSI	CCGCTC	1 cut(s)	484
AccI	GTMKAC	1 cut(s)	143
AccII	CGCG	1 cut(s)	1308
AccIII	TCCGGA	1 cut(s)	887
AciI	CCGC	3 cut(s)	239, 484, 1308
AclWI	GGATC	2 cut(s)	459, 1126
AcsI	RAATTY	6 cut(s)	130, 628, 826, 974, 1267, 1346
AcuI	CTGAAG	4 cut(s)	405, 537, 893, 1038
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	5 cut(s)	430, 908, 1023, 1229, 1338
AfiI	CCNNNNNNNGG	5 cut(s)	383, 425, 887, 1031, 1956
AflII	CTTAAG	2 cut(s)	635, 1855
AflIII	ACRYGT	1 cut(s)	1138
AhlI	ACTAGT	1 cut(s)	742
AjnI	CCWGG	5 cut(s)	437, 471, 715, 1067, 1542
Alw21I	GWGCWC	2 cut(s)	26, 1766
Alw26I	GTCTC	6 cut(s)	411, 751, 1107, 1533, 1830, 1830
Alw44I	GTGCAC	1 cut(s)	1762
AlwI	GGATC	2 cut(s)	459, 1126
AlwNI	CAGNNNCTG	1 cut(s)	1839
Ama87I	CYCGRG	2 cut(s)	50, 1260
Aor13HI	TCCGGA	1 cut(s)	887
AoxI	GGCC	3 cut(s)	416, 546, 1668
ApaLI	GTGCAC	1 cut(s)	1762
ApeKI	GCWGC	8 cut(s)	602, 1041, 1162, 1637, 1739, 1742, 1871, 1937
ApoI	RAATTY	6 cut(s)	130, 628, 826, 974, 1267, 1346
Asp718I	GGTACC	1 cut(s)	1021
AspLEI	GCGC	1 cut(s)	1308
AspS9I	GGNCC	4 cut(s)	79, 547, 917, 1788
AsuHPI	GGTGA	1 cut(s)	1393
AvaI	CYCGRG	2 cut(s)	50, 1260
AvaII	GGWCC	3 cut(s)	79, 917, 1788
BaeGI	GKGCMC	1 cut(s)	1766
BanI	GGYRCC	2 cut(s)	434, 1021
BanII	GRGCYC	1 cut(s)	26
BarI	GAAGNNNNNNTAC	2 cut(s)	1883, 1915
Bbv12I	GWGCWC	2 cut(s)	26, 1766
BbvCI	CCTCAGC	1 cut(s)	987
BbvI	GCAGC	8 cut(s)	589, 1053, 1149, 1624, 1751, 1754, 1858, 1949
BccI	CCATC	4 cut(s)	794, 1025, 1033, 1754
BceAI	ACGGC	1 cut(s)	431
BciT130I	CCWGG	5 cut(s)	439, 473, 717, 1069, 1544
BcoDI	GTCTC	6 cut(s)	411, 751, 1107, 1533, 1830, 1830
BcuI	ACTAGT	1 cut(s)	742
BfaI	CTAG	5 cut(s)	348, 597, 743, 1130, 1536
BfmI	CTRYAG	3 cut(s)	603, 1039, 1769
BfrI	CTTAAG	2 cut(s)	635, 1855
BglII	AGATCT	2 cut(s)	1091, 1218
BisI	GCNGC	9 cut(s)	603, 1042, 1163, 1309, 1638, 1740, 1743, 1872, 1938
BlsI	GCNGC	9 cut(s)	604, 1043, 1164, 1310, 1639, 1741, 1744, 1873, 1939
BmcAI	AGTACT	1 cut(s)	1229
Bme1390I	CCNGG	5 cut(s)	439, 473, 717, 1069, 1544
Bme18I	GGWCC	3 cut(s)	79, 917, 1788
BmeT110I	CYCGRG	2 cut(s)	50, 1260
BmgT120I	GGNCC	4 cut(s)	79, 547, 917, 1788
BmiI	GGNNCC	5 cut(s)	436, 549, 879, 1023, 1790
BmrFI	CCNGG	5 cut(s)	439, 473, 717, 1069, 1544
BmsI	GCATC	7 cut(s)	355, 834, 885, 1347, 1475, 1498, 1524
BpmI	CTGGAG	4 cut(s)	733, 1051, 1764, 1896
Bpu10I	CCTNAGC	1 cut(s)	987
BpuEI	CTTGAG	3 cut(s)	1063, 1392, 1616
Bsa29I	ATCGAT	1 cut(s)	88
BsaBI	GATNNNNATC	1 cut(s)	1514
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1533
BsaJI	CCNNGG	4 cut(s)	472, 1259, 1493, 1950
BsaWI	WCCGGW	1 cut(s)	887
BsaXI	ACNNNNNCTCC	2 cut(s)	1588, 1618
Bsc4I	CCNNNNNNNGG	5 cut(s)	383, 425, 887, 1031, 1956
Bse1I	ACTGG	3 cut(s)	295, 1120, 1197
Bse3DI	GCAATG	5 cut(s)	334, 595, 766, 1180, 1727
Bse8I	GATNNNNATC	1 cut(s)	1514
BseAI	TCCGGA	1 cut(s)	887
BseBI	CCWGG	5 cut(s)	439, 473, 717, 1069, 1544
BseCI	ATCGAT	1 cut(s)	88
BseDI	CCNNGG	4 cut(s)	472, 1259, 1493, 1950
BseGI	GGATG	3 cut(s)	900, 997, 1489
BseJI	GATNNNNATC	1 cut(s)	1514
BseLI	CCNNNNNNNGG	5 cut(s)	383, 425, 887, 1031, 1956
BseMI	GCAATG	5 cut(s)	334, 595, 766, 1180, 1727
BseMII	CTCAG	7 cut(s)	384, 978, 1025, 1515, 1533, 1655, 1939
BseNI	ACTGG	3 cut(s)	295, 1120, 1197
BseRI	GAGGAG	2 cut(s)	1102, 1287
BseSI	GKGCMC	1 cut(s)	1766
BseXI	GCAGC	8 cut(s)	589, 1053, 1149, 1624, 1751, 1754, 1858, 1949
BsgI	GTGCAG	3 cut(s)	1437, 1758, 1863
Bsh1236I	CGCG	1 cut(s)	1308
BshFI	GGCC	3 cut(s)	418, 548, 1670
BshNI	GGYRCC	2 cut(s)	434, 1021
BshVI	ATCGAT	1 cut(s)	88
BsiHKAI	GWGCWC	2 cut(s)	26, 1766
BsiHKCI	CYCGRG	2 cut(s)	50, 1260
BsiSI	CCGG	1 cut(s)	888
BslFI	GGGAC	1 cut(s)	1397
BslI	CCNNNNNNNGG	5 cut(s)	383, 425, 887, 1031, 1956
BsmAI	GTCTC	6 cut(s)	411, 751, 1107, 1533, 1830, 1830
BsmBI	CGTCTC	1 cut(s)	1107
BsmFI	GGGAC	1 cut(s)	1397
BsnI	GGCC	3 cut(s)	418, 548, 1670
Bso31I	GGTCTC	1 cut(s)	1533
BsoBI	CYCGRG	2 cut(s)	50, 1260
Bsp1286I	GDGCHC	2 cut(s)	26, 1766
Bsp13I	TCCGGA	1 cut(s)	887
Bsp143I	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
BspACI	CCGC	3 cut(s)	239, 484, 1308
BspANI	GGCC	3 cut(s)	418, 548, 1670
BspCNI	CTCAG	7 cut(s)	385, 979, 1024, 1516, 1532, 1654, 1938
BspDI	ATCGAT	1 cut(s)	88
BspEI	TCCGGA	1 cut(s)	887
BspFNI	CGCG	1 cut(s)	1308
BspLI	GGNNCC	5 cut(s)	436, 549, 879, 1023, 1790
BspMAI	CTGCAG	3 cut(s)	607, 1043, 1773
BspPI	GGATC	2 cut(s)	459, 1126
BspQI	GCTCTTC	3 cut(s)	254, 301, 1152
BspT107I	GGYRCC	2 cut(s)	434, 1021
BspTI	CTTAAG	2 cut(s)	635, 1855
BspTNI	GGTCTC	1 cut(s)	1533
BsrBI	CCGCTC	1 cut(s)	484
BsrDI	GCAATG	5 cut(s)	334, 595, 766, 1180, 1727
BsrI	ACTGG	3 cut(s)	295, 1120, 1197
BssECI	CCNNGG	4 cut(s)	472, 1259, 1493, 1950
BssMI	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
BssNAI	GTATAC	1 cut(s)	144
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	1493, 1950
Bst1107I	GTATAC	1 cut(s)	144
Bst2UI	CCWGG	5 cut(s)	439, 473, 717, 1069, 1544
Bst4CI	ACNGT	2 cut(s)	118, 1841
Bst6I	CTCTTC	3 cut(s)	254, 301, 1152
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	2 cut(s)	635, 1855
BstDEI	CTNAG	8 cut(s)	393, 903, 987, 1011, 1519, 1524, 1641, 1925
BstENI	CCTNNNNNAGG	1 cut(s)	1954
BstF5I	GGATG	3 cut(s)	900, 997, 1489
BstFNI	CGCG	1 cut(s)	1308
BstHHI	GCGC	1 cut(s)	1308
BstKTI	GATC	7 cut(s)	467, 1094, 1121, 1221, 1354, 1854, 1924
BstMAI	GTCTC	6 cut(s)	411, 751, 1107, 1533, 1830, 1830
BstMBI	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
BstMWI	GCNNNNNNNGC	2 cut(s)	1041, 1729
BstNI	CCWGG	5 cut(s)	439, 473, 717, 1069, 1544
BstNSI	RCATGY	1 cut(s)	1811
BstSCI	CCNGG	5 cut(s)	437, 471, 715, 1067, 1542
BstSFI	CTRYAG	3 cut(s)	603, 1039, 1769
BstSLI	GKGCMC	1 cut(s)	1766
BstUI	CGCG	1 cut(s)	1308
BstV1I	GCAGC	8 cut(s)	589, 1053, 1149, 1624, 1751, 1754, 1858, 1949
BstX2I	RGATCY	3 cut(s)	464, 1091, 1218
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	3 cut(s)	464, 1091, 1218
BstZ17I	GTATAC	1 cut(s)	144
Bsu15I	ATCGAT	1 cut(s)	88
BsuRI	GGCC	3 cut(s)	418, 548, 1670
BsuTUI	ATCGAT	1 cut(s)	88
BtsCI	GGATG	3 cut(s)	900, 997, 1489
BtsIMutI	CAGTG	1 cut(s)	429
CaiI	CAGNNNCTG	1 cut(s)	1839
CfoI	GCGC	1 cut(s)	1308
Cfr13I	GGNCC	4 cut(s)	79, 547, 917, 1788
ClaI	ATCGAT	1 cut(s)	88
CsiI	ACCWGGT	1 cut(s)	1542
Csp6I	GTAC	5 cut(s)	429, 907, 1022, 1228, 1337
CviAII	CATG	4 cut(s)	76, 1378, 1808, 1912
CviQI	GTAC	5 cut(s)	429, 907, 1022, 1228, 1337
DdeI	CTNAG	8 cut(s)	393, 903, 987, 1011, 1519, 1524, 1641, 1925
DpnI	GATC	7 cut(s)	466, 1093, 1120, 1220, 1353, 1853, 1923
DpnII	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
DraI	TTTAAA	1 cut(s)	135
DrdI	GACNNNNNNGTC	1 cut(s)	649
DseDI	GACNNNNNNGTC	1 cut(s)	649
Eam1104I	CTCTTC	3 cut(s)	254, 301, 1152
EarI	CTCTTC	3 cut(s)	254, 301, 1152
Ecl136II	GAGCTC	1 cut(s)	24
Eco130I	CCWWGG	2 cut(s)	1493, 1950
Eco24I	GRGCYC	1 cut(s)	26
Eco31I	GGTCTC	1 cut(s)	1533
Eco32I	GATATC	1 cut(s)	1060
Eco47I	GGWCC	3 cut(s)	79, 917, 1788
Eco53kI	GAGCTC	1 cut(s)	24
Eco57I	CTGAAG	4 cut(s)	405, 537, 893, 1038
Eco88I	CYCGRG	2 cut(s)	50, 1260
EcoICRI	GAGCTC	1 cut(s)	24
EcoNI	CCTNNNNNAGG	1 cut(s)	1954
EcoO109I	RGGNCCY	1 cut(s)	547
EcoRI	GAATTC	2 cut(s)	628, 826
EcoRII	CCWGG	5 cut(s)	437, 471, 715, 1067, 1542
EcoRV	GATATC	1 cut(s)	1060
EcoT14I	CCWWGG	2 cut(s)	1493, 1950
EcoT38I	GRGCYC	1 cut(s)	26
ErhI	CCWWGG	2 cut(s)	1493, 1950
Esp3I	CGTCTC	1 cut(s)	1107
FaeI	CATG	4 cut(s)	79, 1381, 1811, 1915
FalI	AAGNNNNNCTT	6 cut(s)	258, 290, 637, 669, 1353, 1385
FaqI	GGGAC	1 cut(s)	1397
FatI	CATG	4 cut(s)	75, 1377, 1807, 1911
FauI	CCCGC	2 cut(s)	232, 477
FauNDI	CATATG	2 cut(s)	1302, 1609
FblI	GTMKAC	1 cut(s)	143
Fnu4HI	GCNGC	9 cut(s)	603, 1042, 1163, 1309, 1638, 1740, 1743, 1872, 1938
FokI	GGATG	3 cut(s)	907, 1004, 1476
FriOI	GRGCYC	1 cut(s)	26
Fsp4HI	GCNGC	9 cut(s)	603, 1042, 1163, 1309, 1638, 1740, 1743, 1872, 1938
FspBI	CTAG	5 cut(s)	348, 597, 743, 1130, 1536
GlaI	GCGC	1 cut(s)	1307
GluI	GCNGC	9 cut(s)	603, 1042, 1163, 1309, 1638, 1740, 1743, 1872, 1938
GsuI	CTGGAG	4 cut(s)	733, 1051, 1764, 1896
HaeIII	GGCC	3 cut(s)	418, 548, 1670
HapII	CCGG	1 cut(s)	888
HhaI	GCGC	1 cut(s)	1308
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	4 cut(s)	79, 1381, 1811, 1915
Hin6I	GCGC	1 cut(s)	1306
HinP1I	GCGC	1 cut(s)	1306
HincII	GTYRAC	1 cut(s)	673
HindII	GTYRAC	1 cut(s)	673
HindIII	AAGCTT	1 cut(s)	1655
HinfI	GANTC	8 cut(s)	85, 103, 593, 787, 1009, 1252, 1279, 1526
HpaII	CCGG	1 cut(s)	888
HphI	GGTGA	1 cut(s)	1393
Hpy166II	GTNNAC	5 cut(s)	144, 673, 909, 1339, 1764
Hpy188III	TCNNGA	5 cut(s)	82, 215, 348, 750, 888
Hpy8I	GTNNAC	5 cut(s)	144, 673, 909, 1339, 1764
Hpy99I	CGWCG	2 cut(s)	10, 21
HpyAV	CCTTC	8 cut(s)	429, 538, 561, 661, 868, 1147, 1681, 1885
HpyCH4III	ACNGT	2 cut(s)	118, 1841
HpyCH4IV	ACGT	3 cut(s)	69, 1100, 1138
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1041, 1729
HpyF3I	CTNAG	8 cut(s)	393, 903, 987, 1011, 1519, 1524, 1641, 1925
HpySE526I	ACGT	3 cut(s)	69, 1100, 1138
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	4 cut(s)	79, 1381, 1811, 1915
HspAI	GCGC	1 cut(s)	1306
Kpn2I	TCCGGA	1 cut(s)	887
KpnI	GGTACC	1 cut(s)	1025
Kzo9I	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
LguI	GCTCTTC	3 cut(s)	254, 301, 1152
LmnI	GCTCC	2 cut(s)	21, 771
Lsp1109I	GCAGC	8 cut(s)	589, 1053, 1149, 1624, 1751, 1754, 1858, 1949
LweI	GCATC	7 cut(s)	355, 834, 885, 1347, 1475, 1498, 1524
MabI	ACCWGGT	1 cut(s)	1542
MaeI	CTAG	5 cut(s)	348, 597, 743, 1130, 1536
MaeII	ACGT	3 cut(s)	69, 1100, 1138
MaeIII	GTNAC	6 cut(s)	451, 937, 1125, 1381, 1814, 1894
MalI	GATC	7 cut(s)	466, 1093, 1120, 1220, 1353, 1853, 1923
MbiI	CCGCTC	1 cut(s)	484
MboI	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
MboII	GAAGA	8 cut(s)	211, 271, 315, 318, 336, 692, 1169, 1435
MfeI	CAATTG	2 cut(s)	1321, 1941
MflI	RGATCY	3 cut(s)	464, 1091, 1218
MhlI	GDGCHC	2 cut(s)	26, 1766
MlyI	GAGTC	2 cut(s)	1003, 1535
MmeI	TCCRAC	2 cut(s)	280, 1064
MroI	TCCGGA	1 cut(s)	887
MslI	CAYNNNNRTG	1 cut(s)	1732
MspA1I	CMGCKG	1 cut(s)	1523
MspCI	CTTAAG	2 cut(s)	635, 1855
MspI	CCGG	1 cut(s)	888
MspR9I	CCNGG	5 cut(s)	439, 473, 717, 1069, 1544
MunI	CAATTG	2 cut(s)	1321, 1941
MvaI	CCWGG	5 cut(s)	439, 473, 717, 1069, 1544
MvnI	CGCG	1 cut(s)	1308
MwoI	GCNNNNNNNGC	2 cut(s)	1041, 1729
NdeI	CATATG	2 cut(s)	1302, 1609
NdeII	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
NlaIII	CATG	4 cut(s)	79, 1381, 1811, 1915
NlaIV	GGNNCC	5 cut(s)	436, 549, 879, 1023, 1790
NmuCI	GTSAC	3 cut(s)	451, 1381, 1894
NspI	RCATGY	1 cut(s)	1811
PciSI	GCTCTTC	3 cut(s)	254, 301, 1152
PfeI	GAWTC	6 cut(s)	85, 103, 593, 787, 1252, 1279
PflMI	CCANNNNNTGG	2 cut(s)	383, 1031
PfoI	TCCNGGA	1 cut(s)	1067
PkrI	GCNGC	9 cut(s)	604, 1043, 1164, 1310, 1639, 1741, 1744, 1873, 1939
PleI	GAGTC	2 cut(s)	1003, 1534
PpsI	GAGTC	2 cut(s)	1003, 1534
Psp124BI	GAGCTC	1 cut(s)	26
Psp6I	CCWGG	5 cut(s)	437, 471, 715, 1067, 1542
PspGI	CCWGG	5 cut(s)	437, 471, 715, 1067, 1542
PspN4I	GGNNCC	5 cut(s)	436, 549, 879, 1023, 1790
PspPI	GGNCC	4 cut(s)	79, 547, 917, 1788
PstI	CTGCAG	3 cut(s)	607, 1043, 1773
PstNI	CAGNNNCTG	1 cut(s)	1839
PsuI	RGATCY	3 cut(s)	464, 1091, 1218
PvuII	CAGCTG	1 cut(s)	1523
RsaI	GTAC	5 cut(s)	430, 908, 1023, 1229, 1338
RsaNI	GTAC	5 cut(s)	429, 907, 1022, 1228, 1337
RseI	CAYNNNNRTG	1 cut(s)	1732
SacI	GAGCTC	1 cut(s)	26
SapI	GCTCTTC	3 cut(s)	254, 301, 1152
SatI	GCNGC	9 cut(s)	603, 1042, 1163, 1309, 1638, 1740, 1743, 1872, 1938
Sau3AI	GATC	7 cut(s)	464, 1091, 1118, 1218, 1351, 1851, 1921
Sau96I	GGNCC	4 cut(s)	79, 547, 917, 1788
ScaI	AGTACT	1 cut(s)	1229
SchI	GAGTC	2 cut(s)	1003, 1535
ScrFI	CCNGG	5 cut(s)	439, 473, 717, 1069, 1544
SduI	GDGCHC	2 cut(s)	26, 1766
SexAI	ACCWGGT	1 cut(s)	1542
SfaNI	GCATC	7 cut(s)	355, 834, 885, 1347, 1475, 1498, 1524
SfcI	CTRYAG	3 cut(s)	603, 1039, 1769
SinI	GGWCC	3 cut(s)	79, 917, 1788
SmiMI	CAYNNNNRTG	1 cut(s)	1732
SmlI	CTYRAG	5 cut(s)	635, 1078, 1407, 1631, 1855
SmoI	CTYRAG	5 cut(s)	635, 1078, 1407, 1631, 1855
SpeI	ACTAGT	1 cut(s)	742
SsiI	CCGC	3 cut(s)	239, 484, 1308
SspMI	CTAG	5 cut(s)	348, 597, 743, 1130, 1536
SstI	GAGCTC	1 cut(s)	26
StyD4I	CCNGG	5 cut(s)	437, 471, 715, 1067, 1542
StyI	CCWWGG	2 cut(s)	1493, 1950
TaaI	ACNGT	2 cut(s)	118, 1841
TaiI	ACGT	3 cut(s)	72, 1103, 1141
TaqI	TCGA	4 cut(s)	88, 790, 1143, 1683
TatI	WGTACW	3 cut(s)	906, 1227, 1336
TauI	GCSGC	1 cut(s)	1311
TfiI	GAWTC	6 cut(s)	85, 103, 593, 787, 1252, 1279
TscAI	CASTG	1 cut(s)	429
TseFI	GTSAC	3 cut(s)	451, 1381, 1894
TseI	GCWGC	8 cut(s)	602, 1041, 1162, 1637, 1739, 1742, 1871, 1937
Tsp45I	GTSAC	3 cut(s)	451, 1381, 1894
TspDTI	ATGAA	4 cut(s)	606, 1166, 1443, 1719
TspGWI	ACGGA	1 cut(s)	34
TspRI	CASTG	1 cut(s)	429
Van91I	CCANNNNNTGG	2 cut(s)	383, 1031
Vha464I	CTTAAG	2 cut(s)	635, 1855
VneI	GTGCAC	1 cut(s)	1762
VpaK11BI	GGWCC	3 cut(s)	79, 917, 1788
XagI	CCTNNNNNAGG	1 cut(s)	1954
XapI	RAATTY	6 cut(s)	130, 628, 826, 974, 1267, 1346
XbaI	TCTAGA	1 cut(s)	347
XceI	RCATGY	1 cut(s)	1811
XmiI	GTMKAC	1 cut(s)	143
XspI	CTAG	5 cut(s)	348, 597, 743, 1130, 1536
ZrmI	AGTACT	1 cut(s)	1229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.