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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56180 AT1G56180 |
| fragaria_vesca | FvH4_3g14920 FvH4_3g14920 FvH4_3g14920 FvH4_3g14920 FvH4_3g14920 FvH4_3g14920 FvH4_3g14920 FvH4_3g14920 |
| malus_domestica | MD05G1233900.v1.1 |
| prunus_persica | Prupe.4G133700_v2.0.a1 Prupe.4G133700_v2.0.a1 Prupe.4G133700_v2.0.a1 Prupe.4G133700_v2.0.a1 Prupe.4G133700_v2.0.a1 |
| pyrus_communis | pycom05g21130 |
| rosa_chinensis | RchiOBHm_Chr5g0024521 |
| rosa_laevigata | RLG00000032804 |
| rosa_multiflora | Rmu_sc0000761.1_g000009 Rmu_sc0000761.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00054730 |
| rosa_rugosa | Rorug05G0083500 Rorug05G0083600 |
| rosa_samantha | Rh5AG175100 Rh5AG175400 Rh5BG172600 Rh5CG188700 Rh5DG174200 |
| rosa_wichuraiana | Rw5G015720 Rw5G015800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 703 |
| AccB1I | GGYRCC | 1 cut(s) | 99 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 684 |
| AccI | GTMKAC | 1 cut(s) | 263 |
| AccII | CGCG | 1 cut(s) | 90 |
| AciI | CCGC | 3 cut(s) | 561, 635, 818 |
| AclWI | GGATC | 3 cut(s) | 700, 713, 773 |
| AcoI | YGGCCR | 2 cut(s) | 269, 846 |
| AcsI | RAATTY | 4 cut(s) | 497, 672, 804, 973 |
| AcuI | CTGAAG | 2 cut(s) | 882, 948 |
| AcvI | CACGTG | 2 cut(s) | 333, 446 |
| AcyI | GRCGYC | 2 cut(s) | 100, 700 |
| AfaI | GTAC | 2 cut(s) | 143, 896 |
| AfeI | AGCGCT | 1 cut(s) | 123 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 410, 684, 764, 765 |
| AflIII | ACRYGT | 3 cut(s) | 330, 332, 443 |
| AgeI | ACCGGT | 1 cut(s) | 479 |
| AgsI | TTSAA | 3 cut(s) | 469, 477, 809 |
| AjnI | CCWGG | 1 cut(s) | 324 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 814, 846 |
| AluBI | AGCT | 7 cut(s) | 283, 358, 371, 668, 932, 1100, 1112 |
| AluI | AGCT | 7 cut(s) | 283, 358, 371, 668, 932, 1100, 1112 |
| Alw21I | GWGCWC | 1 cut(s) | 1093 |
| Alw26I | GTCTC | 2 cut(s) | 197, 1053 |
| Alw44I | GTGCAC | 1 cut(s) | 1089 |
| AlwI | GGATC | 3 cut(s) | 700, 713, 773 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 897 |
| Ama87I | CYCGRG | 2 cut(s) | 112, 200 |
| Aor51HI | AGCGCT | 1 cut(s) | 123 |
| AoxI | GGCC | 5 cut(s) | 3, 269, 599, 686, 846 |
| ApaLI | GTGCAC | 1 cut(s) | 1089 |
| ApeKI | GCWGC | 5 cut(s) | 660, 923, 1100, 1125, 1169 |
| ApoI | RAATTY | 4 cut(s) | 497, 672, 804, 973 |
| AsiGI | ACCGGT | 1 cut(s) | 479 |
| AspLEI | GCGC | 6 cut(s) | 92, 102, 124, 162, 179, 544 |
| AspS9I | GGNCC | 2 cut(s) | 166, 322 |
| AsuC2I | CCSGG | 1 cut(s) | 268 |
| AsuHPI | GGTGA | 1 cut(s) | 781 |
| AsuNHI | GCTAGC | 1 cut(s) | 625 |
| AvaI | CYCGRG | 2 cut(s) | 112, 200 |
| AvaII | GGWCC | 2 cut(s) | 166, 322 |
| BaeGI | GKGCMC | 1 cut(s) | 1093 |
| BalI | TGGCCA | 1 cut(s) | 848 |
| BamHI | GGATCC | 1 cut(s) | 705 |
| BanI | GGYRCC | 1 cut(s) | 99 |
| BbrPI | CACGTG | 2 cut(s) | 333, 446 |
| BbsI | GAAGAC | 3 cut(s) | 476, 874, 986 |
| Bbv12I | GWGCWC | 1 cut(s) | 1093 |
| BbvI | GCAGC | 5 cut(s) | 647, 910, 1087, 1137, 1181 |
| BccI | CCATC | 4 cut(s) | 236, 793, 869, 1038 |
| BceAI | ACGGC | 1 cut(s) | 137 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 151, 185 |
| BciT130I | CCWGG | 1 cut(s) | 326 |
| BcnI | CCSGG | 1 cut(s) | 268 |
| BcoDI | GTCTC | 2 cut(s) | 197, 1053 |
| BfaI | CTAG | 1 cut(s) | 626 |
| BfmI | CTRYAG | 1 cut(s) | 1101 |
| BfoI | RGCGCY | 3 cut(s) | 103, 125, 180 |
| BisI | GCNGC | 5 cut(s) | 661, 924, 1101, 1126, 1170 |
| BlpI | GCTNAGC | 1 cut(s) | 664 |
| BlsI | GCNGC | 5 cut(s) | 662, 925, 1102, 1127, 1171 |
| Bme1390I | CCNGG | 2 cut(s) | 268, 326 |
| Bme18I | GGWCC | 2 cut(s) | 166, 322 |
| BmeT110I | CYCGRG | 2 cut(s) | 112, 200 |
| BmgT120I | GGNCC | 2 cut(s) | 166, 322 |
| BmiI | GGNNCC | 2 cut(s) | 101, 707 |
| BmrFI | CCNGG | 2 cut(s) | 268, 326 |
| BmsI | GCATC | 2 cut(s) | 500, 736 |
| BmtI | GCTAGC | 1 cut(s) | 629 |
| BoxI | GACNNNNGTC | 1 cut(s) | 333 |
| BpiI | GAAGAC | 3 cut(s) | 476, 874, 986 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 664 |
| BpuEI | CTTGAG | 3 cut(s) | 79, 368, 567 |
| BpuMI | CCSGG | 1 cut(s) | 268 |
| BsaAI | YACGTR | 2 cut(s) | 333, 446 |
| BsaBI | GATNNNNATC | 2 cut(s) | 233, 710 |
| BsaHI | GRCGYC | 2 cut(s) | 100, 700 |
| BsaI | GGTCTC | 2 cut(s) | 197, 1053 |
| BsaJI | CCNNGG | 1 cut(s) | 649 |
| BsaWI | WCCGGW | 1 cut(s) | 479 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 410, 684, 764, 765 |
| Bse118I | RCCGGY | 2 cut(s) | 173, 479 |
| Bse1I | ACTGG | 2 cut(s) | 678, 849 |
| Bse3DI | GCAATG | 2 cut(s) | 918, 1170 |
| Bse8I | GATNNNNATC | 2 cut(s) | 233, 710 |
| BseBI | CCWGG | 1 cut(s) | 326 |
| BseDI | CCNNGG | 1 cut(s) | 649 |
| BseGI | GGATG | 1 cut(s) | 711 |
| BseJI | GATNNNNATC | 2 cut(s) | 233, 710 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 410, 684, 764, 765 |
| BseMI | GCAATG | 2 cut(s) | 918, 1170 |
| BseMII | CTCAG | 2 cut(s) | 839, 1014 |
| BseNI | ACTGG | 2 cut(s) | 678, 849 |
| BseRI | GAGGAG | 1 cut(s) | 9 |
| BseSI | GKGCMC | 1 cut(s) | 1093 |
| BseX3I | CGGCCG | 1 cut(s) | 269 |
| BseXI | GCAGC | 5 cut(s) | 647, 910, 1087, 1137, 1181 |
| BseYI | CCCAGC | 1 cut(s) | 283 |
| BsgI | GTGCAG | 1 cut(s) | 815 |
| Bsh1236I | CGCG | 1 cut(s) | 90 |
| Bsh1285I | CGRYCG | 1 cut(s) | 272 |
| BshFI | GGCC | 5 cut(s) | 5, 271, 601, 688, 848 |
| BshNI | GGYRCC | 1 cut(s) | 99 |
| BshTI | ACCGGT | 1 cut(s) | 479 |
| BsiEI | CGRYCG | 1 cut(s) | 272 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1093 |
| BsiHKCI | CYCGRG | 2 cut(s) | 112, 200 |
| BsiSI | CCGG | 3 cut(s) | 174, 268, 480 |
| BslFI | GGGAC | 3 cut(s) | 95, 741, 848 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 410, 684, 764, 765 |
| BsmAI | GTCTC | 2 cut(s) | 197, 1053 |
| BsmFI | GGGAC | 3 cut(s) | 95, 741, 848 |
| BsnI | GGCC | 5 cut(s) | 5, 271, 601, 688, 848 |
| Bso31I | GGTCTC | 2 cut(s) | 197, 1053 |
| BsoBI | CYCGRG | 2 cut(s) | 112, 200 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1093 |
| Bsp143I | GATC | 4 cut(s) | 116, 234, 705, 778 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 664 |
| BspACI | CCGC | 3 cut(s) | 561, 635, 818 |
| BspANI | GGCC | 5 cut(s) | 5, 271, 601, 688, 848 |
| BspCNI | CTCAG | 2 cut(s) | 838, 1015 |
| BspFNI | CGCG | 1 cut(s) | 90 |
| BspLI | GGNNCC | 2 cut(s) | 101, 707 |
| BspMAI | CTGCAG | 1 cut(s) | 1105 |
| BspOI | GCTAGC | 1 cut(s) | 629 |
| BspPI | GGATC | 3 cut(s) | 700, 713, 773 |
| BspT107I | GGYRCC | 1 cut(s) | 99 |
| BspTNI | GGTCTC | 2 cut(s) | 197, 1053 |
| BsrDI | GCAATG | 2 cut(s) | 918, 1170 |
| BsrFI | RCCGGY | 2 cut(s) | 173, 479 |
| BsrI | ACTGG | 2 cut(s) | 678, 849 |
| BssAI | RCCGGY | 2 cut(s) | 173, 479 |
| BssECI | CCNNGG | 1 cut(s) | 649 |
| BssMI | GATC | 4 cut(s) | 116, 234, 705, 778 |
| BssNI | GRCGYC | 2 cut(s) | 100, 700 |
| BssT1I | CCWWGG | 1 cut(s) | 649 |
| Bst2UI | CCWGG | 1 cut(s) | 326 |
| Bst4CI | ACNGT | 3 cut(s) | 109, 463, 613 |
| Bst6I | CTCTTC | 1 cut(s) | 1056 |
| BstACI | GRCGYC | 2 cut(s) | 100, 700 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 920 |
| BstBAI | YACGTR | 2 cut(s) | 333, 446 |
| BstC8I | GCNNGC | 4 cut(s) | 175, 563, 627, 916 |
| BstDEI | CTNAG | 4 cut(s) | 507, 664, 825, 1023 |
| BstF5I | GGATG | 1 cut(s) | 711 |
| BstFNI | CGCG | 1 cut(s) | 90 |
| BstH2I | RGCGCY | 3 cut(s) | 103, 125, 180 |
| BstHHI | GCGC | 6 cut(s) | 92, 102, 124, 162, 179, 544 |
| BstKTI | GATC | 4 cut(s) | 119, 237, 708, 781 |
| BstMAI | GTCTC | 2 cut(s) | 197, 1053 |
| BstMBI | GATC | 4 cut(s) | 116, 234, 705, 778 |
| BstMCI | CGRYCG | 1 cut(s) | 272 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 548, 920, 929, 1078, 1097, 1109, 1169 |
| BstNI | CCWGG | 1 cut(s) | 326 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 333 |
| BstSCI | CCNGG | 2 cut(s) | 266, 324 |
| BstSFI | CTRYAG | 1 cut(s) | 1101 |
| BstSLI | GKGCMC | 1 cut(s) | 1093 |
| BstUI | CGCG | 1 cut(s) | 90 |
| BstV1I | GCAGC | 5 cut(s) | 647, 910, 1087, 1137, 1181 |
| BstV2I | GAAGAC | 3 cut(s) | 476, 874, 986 |
| BstX2I | RGATCY | 2 cut(s) | 705, 778 |
| BstYI | RGATCY | 2 cut(s) | 705, 778 |
| BstZI | CGGCCG | 1 cut(s) | 269 |
| BsuRI | GGCC | 5 cut(s) | 5, 271, 601, 688, 848 |
| BtsCI | GGATG | 1 cut(s) | 711 |
| BtsI | GCAGTG | 1 cut(s) | 798 |
| BtsIMutI | CAGTG | 2 cut(s) | 798, 856 |
| Cac8I | GCNNGC | 4 cut(s) | 175, 563, 627, 916 |
| CaiI | CAGNNNCTG | 1 cut(s) | 897 |
| CfoI | GCGC | 6 cut(s) | 92, 102, 124, 162, 179, 544 |
| Cfr10I | RCCGGY | 2 cut(s) | 173, 479 |
| Cfr13I | GGNCC | 2 cut(s) | 166, 322 |
| Csp6I | GTAC | 2 cut(s) | 142, 895 |
| CspAI | ACCGGT | 1 cut(s) | 479 |
| CviAII | CATG | 3 cut(s) | 352, 716, 901 |
| CviQI | GTAC | 2 cut(s) | 142, 895 |
| DdeI | CTNAG | 4 cut(s) | 507, 664, 825, 1023 |
| DinI | GGCGCC | 1 cut(s) | 101 |
| DpnI | GATC | 4 cut(s) | 118, 236, 707, 780 |
| DpnII | GATC | 4 cut(s) | 116, 234, 705, 778 |
| EaeI | YGGCCR | 2 cut(s) | 269, 846 |
| EagI | CGGCCG | 1 cut(s) | 269 |
| Eam1104I | CTCTTC | 1 cut(s) | 1056 |
| EarI | CTCTTC | 1 cut(s) | 1056 |
| EclXI | CGGCCG | 1 cut(s) | 269 |
| Eco130I | CCWWGG | 1 cut(s) | 649 |
| Eco147I | AGGCCT | 1 cut(s) | 601 |
| Eco31I | GGTCTC | 2 cut(s) | 197, 1053 |
| Eco32I | GATATC | 1 cut(s) | 595 |
| Eco47I | GGWCC | 2 cut(s) | 166, 322 |
| Eco47III | AGCGCT | 1 cut(s) | 123 |
| Eco52I | CGGCCG | 1 cut(s) | 269 |
| Eco57I | CTGAAG | 2 cut(s) | 882, 948 |
| Eco72I | CACGTG | 2 cut(s) | 333, 446 |
| Eco88I | CYCGRG | 2 cut(s) | 112, 200 |
| EcoO109I | RGGNCCY | 2 cut(s) | 166, 322 |
| EcoRI | GAATTC | 1 cut(s) | 804 |
| EcoRII | CCWGG | 1 cut(s) | 324 |
| EcoRV | GATATC | 1 cut(s) | 595 |
| EcoT14I | CCWWGG | 1 cut(s) | 649 |
| EgeI | GGCGCC | 1 cut(s) | 101 |
| EheI | GGCGCC | 1 cut(s) | 101 |
| ErhI | CCWWGG | 1 cut(s) | 649 |
| FaeI | CATG | 3 cut(s) | 355, 719, 904 |
| FaiI | YATR | 6 cut(s) | 353, 375, 717, 902, 942, 1083 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 855, 887 |
| FaqI | GGGAC | 3 cut(s) | 95, 741, 848 |
| FatI | CATG | 3 cut(s) | 351, 715, 900 |
| FauI | CCCGC | 2 cut(s) | 554, 811 |
| FblI | GTMKAC | 1 cut(s) | 263 |
| Fnu4HI | GCNGC | 5 cut(s) | 661, 924, 1101, 1126, 1170 |
| FokI | GGATG | 1 cut(s) | 698 |
| Fsp4HI | GCNGC | 5 cut(s) | 661, 924, 1101, 1126, 1170 |
| FspBI | CTAG | 1 cut(s) | 626 |
| GlaI | GCGC | 6 cut(s) | 91, 101, 123, 161, 178, 543 |
| GluI | GCNGC | 5 cut(s) | 661, 924, 1101, 1126, 1170 |
| GsaI | CCCAGC | 1 cut(s) | 287 |
| HaeII | RGCGCY | 3 cut(s) | 103, 125, 180 |
| HaeIII | GGCC | 5 cut(s) | 5, 271, 601, 688, 848 |
| HapII | CCGG | 3 cut(s) | 174, 268, 480 |
| HhaI | GCGC | 6 cut(s) | 92, 102, 124, 162, 179, 544 |
| Hin1I | GRCGYC | 2 cut(s) | 100, 700 |
| Hin1II | CATG | 3 cut(s) | 355, 719, 904 |
| Hin6I | GCGC | 6 cut(s) | 90, 100, 122, 160, 177, 542 |
| HinP1I | GCGC | 6 cut(s) | 90, 100, 122, 160, 177, 542 |
| HincII | GTYRAC | 1 cut(s) | 264 |
| HindII | GTYRAC | 1 cut(s) | 264 |
| HindIII | AAGCTT | 3 cut(s) | 356, 369, 1110 |
| HinfI | GANTC | 3 cut(s) | 260, 274, 638 |
| HpaII | CCGG | 3 cut(s) | 174, 268, 480 |
| HphI | GGTGA | 1 cut(s) | 781 |
| Hpy166II | GTNNAC | 2 cut(s) | 264, 1091 |
| Hpy188I | TCNGA | 2 cut(s) | 128, 705 |
| Hpy188III | TCNNGA | 4 cut(s) | 112, 202, 278, 525 |
| Hpy8I | GTNNAC | 2 cut(s) | 264, 1091 |
| Hpy99I | CGWCG | 1 cut(s) | 705 |
| HpyAV | CCTTC | 2 cut(s) | 34, 857 |
| HpyCH4III | ACNGT | 3 cut(s) | 109, 463, 613 |
| HpyCH4IV | ACGT | 3 cut(s) | 332, 445, 700 |
| HpyCH4V | TGCA | 9 cut(s) | 193, 791, 796, 900, 914, 1003, 1057, 1091, 1103 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 548, 920, 929, 1078, 1097, 1109, 1169 |
| HpyF3I | CTNAG | 4 cut(s) | 507, 664, 825, 1023 |
| HpySE526I | ACGT | 3 cut(s) | 332, 445, 700 |
| Hsp92I | GRCGYC | 2 cut(s) | 100, 700 |
| Hsp92II | CATG | 3 cut(s) | 355, 719, 904 |
| HspAI | GCGC | 6 cut(s) | 90, 100, 122, 160, 177, 542 |
| KasI | GGCGCC | 1 cut(s) | 99 |
| KroI | GCCGGC | 1 cut(s) | 173 |
| KroNI | GCCGGC | 1 cut(s) | 175 |
| Kzo9I | GATC | 4 cut(s) | 116, 234, 705, 778 |
| LmnI | GCTCC | 4 cut(s) | 22, 129, 280, 508 |
| Lsp1109I | GCAGC | 5 cut(s) | 647, 910, 1087, 1137, 1181 |
| LweI | GCATC | 2 cut(s) | 500, 736 |
| MaeI | CTAG | 1 cut(s) | 626 |
| MaeII | ACGT | 3 cut(s) | 332, 445, 700 |
| MaeIII | GTNAC | 2 cut(s) | 451, 851 |
| MalI | GATC | 4 cut(s) | 118, 236, 707, 780 |
| MboI | GATC | 4 cut(s) | 116, 234, 705, 778 |
| MboII | GAAGA | 7 cut(s) | 158, 481, 566, 879, 986, 989, 1043 |
| MfeI | CAATTG | 1 cut(s) | 783 |
| MflI | RGATCY | 2 cut(s) | 705, 778 |
| MhlI | GDGCHC | 1 cut(s) | 1093 |
| MlsI | TGGCCA | 1 cut(s) | 848 |
| MluNI | TGGCCA | 1 cut(s) | 848 |
| Mly113I | GGCGCC | 1 cut(s) | 100 |
| MlyI | GAGTC | 3 cut(s) | 269, 283, 632 |
| MmeI | TCCRAC | 1 cut(s) | 683 |
| Mox20I | TGGCCA | 1 cut(s) | 848 |
| MreI | CGCCGGCG | 1 cut(s) | 173 |
| MroNI | GCCGGC | 1 cut(s) | 173 |
| MscI | TGGCCA | 1 cut(s) | 848 |
| MseI | TTAA | 3 cut(s) | 339, 1107, 1195 |
| MslI | CAYNNNNRTG | 2 cut(s) | 431, 1086 |
| Msp20I | TGGCCA | 1 cut(s) | 848 |
| MspI | CCGG | 3 cut(s) | 174, 268, 480 |
| MspR9I | CCNGG | 2 cut(s) | 268, 326 |
| MunI | CAATTG | 1 cut(s) | 783 |
| MvaI | CCWGG | 1 cut(s) | 326 |
| MvnI | CGCG | 1 cut(s) | 90 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 548, 920, 929, 1078, 1097, 1109, 1169 |
| NaeI | GCCGGC | 1 cut(s) | 175 |
| NarI | GGCGCC | 1 cut(s) | 100 |
| NciI | CCSGG | 1 cut(s) | 268 |
| NdeII | GATC | 4 cut(s) | 116, 234, 705, 778 |
| NgoMIV | GCCGGC | 1 cut(s) | 173 |
| NheI | GCTAGC | 1 cut(s) | 625 |
| NlaIII | CATG | 3 cut(s) | 355, 719, 904 |
| NlaIV | GGNNCC | 2 cut(s) | 101, 707 |
| NmeAIII | GCCGAG | 1 cut(s) | 297 |
| NmuCI | GTSAC | 1 cut(s) | 851 |
| PaeR7I | CTCGAG | 1 cut(s) | 200 |
| PceI | AGGCCT | 1 cut(s) | 601 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 150, 269 |
| PdiI | GCCGGC | 1 cut(s) | 175 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 684 |
| PfoI | TCCNGGA | 1 cut(s) | 324 |
| PinAI | ACCGGT | 1 cut(s) | 479 |
| PkrI | GCNGC | 5 cut(s) | 662, 925, 1102, 1127, 1171 |
| PleI | GAGTC | 3 cut(s) | 268, 282, 632 |
| PluTI | GGCGCC | 1 cut(s) | 103 |
| PmaCI | CACGTG | 2 cut(s) | 333, 446 |
| PmlI | CACGTG | 2 cut(s) | 333, 446 |
| PpsI | GAGTC | 3 cut(s) | 268, 282, 632 |
| Ppu21I | YACGTR | 2 cut(s) | 333, 446 |
| PpuMI | RGGWCCY | 2 cut(s) | 166, 322 |
| PshAI | GACNNNNGTC | 1 cut(s) | 333 |
| Psp5II | RGGWCCY | 2 cut(s) | 166, 322 |
| Psp6I | CCWGG | 1 cut(s) | 324 |
| PspCI | CACGTG | 2 cut(s) | 333, 446 |
| PspFI | CCCAGC | 1 cut(s) | 283 |
| PspGI | CCWGG | 1 cut(s) | 324 |
| PspN4I | GGNNCC | 2 cut(s) | 101, 707 |
| PspPI | GGNCC | 2 cut(s) | 166, 322 |
| PspPPI | RGGWCCY | 2 cut(s) | 166, 322 |
| PstI | CTGCAG | 1 cut(s) | 1105 |
| PstNI | CAGNNNCTG | 1 cut(s) | 897 |
| PsuI | RGATCY | 2 cut(s) | 705, 778 |
| RsaI | GTAC | 2 cut(s) | 143, 896 |
| RsaNI | GTAC | 2 cut(s) | 142, 895 |
| RseI | CAYNNNNRTG | 2 cut(s) | 431, 1086 |
| SalI | GTCGAC | 1 cut(s) | 262 |
| SaqAI | TTAA | 3 cut(s) | 339, 1107, 1195 |
| SatI | GCNGC | 5 cut(s) | 661, 924, 1101, 1126, 1170 |
| Sau3AI | GATC | 4 cut(s) | 116, 234, 705, 778 |
| Sau96I | GGNCC | 2 cut(s) | 166, 322 |
| SchI | GAGTC | 3 cut(s) | 269, 283, 632 |
| ScrFI | CCNGG | 2 cut(s) | 268, 326 |
| SduI | GDGCHC | 1 cut(s) | 1093 |
| SfaNI | GCATC | 2 cut(s) | 500, 736 |
| SfcI | CTRYAG | 1 cut(s) | 1101 |
| SfoI | GGCGCC | 1 cut(s) | 101 |
| Sfr274I | CTCGAG | 1 cut(s) | 200 |
| SgrAI | CRCCGGYG | 1 cut(s) | 173 |
| SinI | GGWCC | 2 cut(s) | 166, 322 |
| SlaI | CTCGAG | 1 cut(s) | 200 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 431, 1086 |
| SmlI | CTYRAG | 4 cut(s) | 94, 200, 383, 582 |
| SmoI | CTYRAG | 4 cut(s) | 94, 200, 383, 582 |
| SseBI | AGGCCT | 1 cut(s) | 601 |
| SsiI | CCGC | 3 cut(s) | 561, 635, 818 |
| SspDI | GGCGCC | 1 cut(s) | 99 |
| SspI | AATATT | 1 cut(s) | 618 |
| SspMI | CTAG | 1 cut(s) | 626 |
| StuI | AGGCCT | 1 cut(s) | 601 |
| StyD4I | CCNGG | 2 cut(s) | 266, 324 |
| StyI | CCWWGG | 1 cut(s) | 649 |
| TaaI | ACNGT | 3 cut(s) | 109, 463, 613 |
| TaiI | ACGT | 3 cut(s) | 335, 448, 703 |
| TaqI | TCGA | 3 cut(s) | 201, 263, 494 |
| Tru1I | TTAA | 3 cut(s) | 339, 1107, 1195 |
| Tru9I | TTAA | 3 cut(s) | 339, 1107, 1195 |
| TscAI | CASTG | 2 cut(s) | 798, 856 |
| TseFI | GTSAC | 1 cut(s) | 851 |
| TseI | GCWGC | 5 cut(s) | 660, 923, 1100, 1125, 1169 |
| Tsp45I | GTSAC | 1 cut(s) | 851 |
| TspDTI | ATGAA | 3 cut(s) | 368, 732, 984 |
| TspRI | CASTG | 2 cut(s) | 798, 856 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 684 |
| VneI | GTGCAC | 1 cut(s) | 1089 |
| VpaK11BI | GGWCC | 2 cut(s) | 166, 322 |
| XapI | RAATTY | 4 cut(s) | 497, 672, 804, 973 |
| XhoI | CTCGAG | 1 cut(s) | 200 |
| XmiI | GTMKAC | 1 cut(s) | 263 |
| XspI | CTAG | 1 cut(s) | 626 |
| ZraI | GACGTC | 1 cut(s) | 701 |