No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17250 AT4G17250 AT4G17250 AT5G47580 |
| fragaria_vesca | FvH4_3g26880 |
| malus_domestica | MD06G1060700.v1.1 |
| prunus_persica | Prupe.5G071700_v2.0.a1 Prupe.5G071900_v2.0.a1 |
| pyrus_communis | pycom06g05020 pycom06g05070 |
| rosa_chinensis | RchiOBHm_Chr7g0202951 RchiOBHm_Chr7g0202961 |
| rosa_laevigata | RLG00000003561 RLG00000003563 |
| rosa_multiflora | Rmu_sc0007263.1_g000002 Rmu_sc0008159.1_g000003 Rmu_sc0008159.1_g000011 Rmu_sc0013377.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00254140 Rroxscaffold_3G00254160 |
| rosa_rugosa | Rorug07G0074000 |
| rosa_samantha | Rh7AG202100 Rh7BG202200 Rh7CG213200 Rh7DG209000 Rh7DG209200 |
| rosa_wichuraiana | Rw7G017660 Rw7G017670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1097, 2000 |
| Acc65I | GGTACC | 1 cut(s) | 558 |
| AccB1I | GGYRCC | 2 cut(s) | 558, 1970 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 973 |
| AccI | GTMKAC | 1 cut(s) | 815 |
| AccIII | TCCGGA | 1 cut(s) | 1344 |
| AciI | CCGC | 3 cut(s) | 240, 682, 792 |
| AclWI | GGATC | 6 cut(s) | 80, 237, 267, 633, 1707, 2174 |
| AcsI | RAATTY | 5 cut(s) | 496, 782, 941, 1594, 2136 |
| AcuI | CTGAAG | 1 cut(s) | 886 |
| AdeI | CACNNNGTG | 1 cut(s) | 2010 |
| AfaI | GTAC | 5 cut(s) | 560, 959, 1589, 1868, 1941 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 37, 68, 326, 973, 1659, 1869, 2122 |
| AhlI | ACTAGT | 1 cut(s) | 604 |
| AjnI | CCWGG | 6 cut(s) | 36, 93, 255, 770, 966, 1611 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 853, 885 |
| Alw21I | GWGCWC | 3 cut(s) | 543, 584, 1241 |
| Alw26I | GTCTC | 2 cut(s) | 722, 1982 |
| AlwI | GGATC | 6 cut(s) | 80, 237, 267, 633, 1707, 2174 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 704, 973, 1023 |
| Ama87I | CYCGRG | 2 cut(s) | 1213, 2184 |
| Aor13HI | TCCGGA | 1 cut(s) | 1344 |
| AoxI | GGCC | 3 cut(s) | 96, 1835, 2187 |
| ApoI | RAATTY | 5 cut(s) | 496, 782, 941, 1594, 2136 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1184, 1752 |
| Asp718I | GGTACC | 1 cut(s) | 558 |
| AspS9I | GGNCC | 2 cut(s) | 963, 2187 |
| AsuHPI | GGTGA | 2 cut(s) | 1475, 1601 |
| AsuII | TTCGAA | 1 cut(s) | 1829 |
| AvaI | CYCGRG | 2 cut(s) | 1213, 2184 |
| AvaII | GGWCC | 1 cut(s) | 963 |
| BaeGI | GKGCMC | 2 cut(s) | 55, 1305 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1054, 1087 |
| BanI | GGYRCC | 2 cut(s) | 558, 1970 |
| BanII | GRGCYC | 4 cut(s) | 584, 1241, 1489, 1584 |
| Bbv12I | GWGCWC | 3 cut(s) | 543, 584, 1241 |
| BbvI | GCAGC | 9 cut(s) | 98, 103, 291, 1142, 1439, 1548, 1658, 1917, 2002 |
| BccI | CCATC | 5 cut(s) | 640, 876, 1454, 1459, 2215 |
| BceAI | ACGGC | 1 cut(s) | 46 |
| BciT130I | CCWGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| BclI | TGATCA | 1 cut(s) | 1333 |
| BcoDI | GTCTC | 2 cut(s) | 722, 1982 |
| BcuI | ACTAGT | 1 cut(s) | 604 |
| BfmI | CTRYAG | 2 cut(s) | 117, 1024 |
| BglII | AGATCT | 2 cut(s) | 1143, 1624 |
| BlpI | GCTNAGC | 1 cut(s) | 275 |
| BmcAI | AGTACT | 2 cut(s) | 959, 1941 |
| Bme1390I | CCNGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| Bme18I | GGWCC | 1 cut(s) | 963 |
| BmeT110I | CYCGRG | 2 cut(s) | 1213, 2184 |
| BmgT120I | GGNCC | 2 cut(s) | 963, 2187 |
| BmiI | GGNNCC | 7 cut(s) | 29, 158, 560, 965, 1343, 1972, 2127 |
| BmrFI | CCNGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| BmrI | ACTGGG | 1 cut(s) | 661 |
| BmsI | GCATC | 8 cut(s) | 98, 417, 756, 1279, 1282, 1892, 1917, 2234 |
| BmuI | ACTGGG | 1 cut(s) | 661 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1215 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1659, 1691 |
| BpmI | CTGGAG | 1 cut(s) | 726 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2252 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 275 |
| Bpu14I | TTCGAA | 1 cut(s) | 1829 |
| BpuEI | CTTGAG | 2 cut(s) | 742, 1225 |
| BsaAI | YACGTR | 1 cut(s) | 1591 |
| BsaBI | GATNNNNATC | 3 cut(s) | 71, 1677, 1698 |
| BsaWI | WCCGGW | 1 cut(s) | 1344 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 853, 883 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 37, 68, 326, 973, 1659, 1869, 2122 |
| Bse118I | RCCGGY | 1 cut(s) | 8 |
| Bse1I | ACTGG | 7 cut(s) | 427, 562, 598, 667, 965, 978, 1509 |
| Bse3DI | GCAATG | 2 cut(s) | 1213, 1330 |
| Bse8I | GATNNNNATC | 3 cut(s) | 71, 1677, 1698 |
| BseAI | TCCGGA | 1 cut(s) | 1344 |
| BseBI | CCWGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| BseGI | GGATG | 5 cut(s) | 89, 126, 408, 648, 1294 |
| BseJI | GATNNNNATC | 3 cut(s) | 71, 1677, 1698 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 37, 68, 326, 973, 1659, 1869, 2122 |
| BseMI | GCAATG | 2 cut(s) | 1213, 1330 |
| BseMII | CTCAG | 3 cut(s) | 289, 1270, 2243 |
| BseNI | ACTGG | 7 cut(s) | 427, 562, 598, 667, 965, 978, 1509 |
| BseSI | GKGCMC | 2 cut(s) | 55, 1305 |
| BseXI | GCAGC | 9 cut(s) | 98, 103, 291, 1142, 1439, 1548, 1658, 1917, 2002 |
| BsgI | GTGCAG | 1 cut(s) | 280 |
| BshFI | GGCC | 3 cut(s) | 98, 1837, 2189 |
| BshNI | GGYRCC | 2 cut(s) | 558, 1970 |
| BsiHKAI | GWGCWC | 3 cut(s) | 543, 584, 1241 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1213, 2184 |
| BsiSI | CCGG | 3 cut(s) | 9, 872, 1345 |
| BslFI | GGGAC | 1 cut(s) | 984 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 37, 68, 326, 973, 1659, 1869, 2122 |
| BsmAI | GTCTC | 2 cut(s) | 722, 1982 |
| BsmFI | GGGAC | 1 cut(s) | 984 |
| BsmI | GAATGC | 2 cut(s) | 135, 2109 |
| BsnI | GGCC | 3 cut(s) | 98, 1837, 2189 |
| BsoBI | CYCGRG | 2 cut(s) | 1213, 2184 |
| Bsp119I | TTCGAA | 1 cut(s) | 1829 |
| Bsp1286I | GDGCHC | 7 cut(s) | 55, 543, 584, 1241, 1305, 1489, 1584 |
| Bsp13I | TCCGGA | 1 cut(s) | 1344 |
| Bsp1407I | TGTACA | 1 cut(s) | 1866 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 275 |
| Bsp19I | CCATGG | 2 cut(s) | 111, 130 |
| BspACI | CCGC | 3 cut(s) | 240, 682, 792 |
| BspANI | GGCC | 3 cut(s) | 98, 1837, 2189 |
| BspCNI | CTCAG | 3 cut(s) | 288, 1269, 2244 |
| BspEI | TCCGGA | 1 cut(s) | 1344 |
| BspHI | TCATGA | 4 cut(s) | 354, 489, 1039, 1950 |
| BspLI | GGNNCC | 7 cut(s) | 29, 158, 560, 965, 1343, 1972, 2127 |
| BspMAI | CTGCAG | 2 cut(s) | 121, 1028 |
| BspPI | GGATC | 6 cut(s) | 80, 237, 267, 633, 1707, 2174 |
| BspT104I | TTCGAA | 1 cut(s) | 1829 |
| BspT107I | GGYRCC | 2 cut(s) | 558, 1970 |
| BsrDI | GCAATG | 2 cut(s) | 1213, 1330 |
| BsrFI | RCCGGY | 1 cut(s) | 8 |
| BsrGI | TGTACA | 1 cut(s) | 1866 |
| BsrI | ACTGG | 7 cut(s) | 427, 562, 598, 667, 965, 978, 1509 |
| BssAI | RCCGGY | 1 cut(s) | 8 |
| BssT1I | CCWWGG | 3 cut(s) | 111, 130, 325 |
| Bst2UI | CCWGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| Bst4CI | ACNGT | 7 cut(s) | 301, 514, 844, 992, 1201, 1713, 1948 |
| Bst6I | CTCTTC | 1 cut(s) | 2025 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1023, 1164 |
| BstAUI | TGTACA | 1 cut(s) | 1866 |
| BstBAI | YACGTR | 1 cut(s) | 1591 |
| BstBI | TTCGAA | 1 cut(s) | 1829 |
| BstC8I | GCNNGC | 3 cut(s) | 267, 1019, 2055 |
| BstDEI | CTNAG | 7 cut(s) | 275, 525, 535, 1220, 1246, 1256, 2252 |
| BstDSI | CCRYGG | 3 cut(s) | 62, 111, 130 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 35 |
| BstF5I | GGATG | 5 cut(s) | 89, 126, 408, 648, 1294 |
| BstMAI | GTCTC | 2 cut(s) | 722, 1982 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 95, 271, 425, 481, 707, 1023, 1164, 1505, 1514 |
| BstNI | CCWGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| BstNSI | RCATGY | 3 cut(s) | 455, 696, 2057 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1215 |
| BstSCI | CCNGG | 6 cut(s) | 36, 93, 255, 770, 966, 1611 |
| BstSFI | CTRYAG | 2 cut(s) | 117, 1024 |
| BstSLI | GKGCMC | 2 cut(s) | 55, 1305 |
| BstSNI | TACGTA | 1 cut(s) | 1591 |
| BstV1I | GCAGC | 9 cut(s) | 98, 103, 291, 1142, 1439, 1548, 1658, 1917, 2002 |
| BstX2I | RGATCY | 7 cut(s) | 72, 229, 625, 1143, 1624, 1699, 2179 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1482 |
| BstYI | RGATCY | 7 cut(s) | 72, 229, 625, 1143, 1624, 1699, 2179 |
| BsuRI | GGCC | 3 cut(s) | 98, 1837, 2189 |
| BtgI | CCRYGG | 3 cut(s) | 62, 111, 130 |
| BtgZI | GCGATG | 2 cut(s) | 30, 874 |
| BtsCI | GGATG | 5 cut(s) | 89, 126, 408, 648, 1294 |
| BtsI | GCAGTG | 1 cut(s) | 1021 |
| BtsIMutI | CAGTG | 5 cut(s) | 55, 231, 1021, 1197, 1329 |
| Cac8I | GCNNGC | 3 cut(s) | 267, 1019, 2055 |
| CaiI | CAGNNNCTG | 3 cut(s) | 704, 973, 1023 |
| CciI | TCATGA | 4 cut(s) | 354, 489, 1039, 1950 |
| Cfr10I | RCCGGY | 1 cut(s) | 8 |
| Cfr13I | GGNCC | 2 cut(s) | 963, 2187 |
| Csp6I | GTAC | 5 cut(s) | 559, 958, 1588, 1867, 1940 |
| CviQI | GTAC | 5 cut(s) | 559, 958, 1588, 1867, 1940 |
| DdeI | CTNAG | 7 cut(s) | 275, 525, 535, 1220, 1246, 1256, 2252 |
| DraI | TTTAAA | 2 cut(s) | 781, 946 |
| DraIII | CACNNNGTG | 1 cut(s) | 2010 |
| Eam1104I | CTCTTC | 1 cut(s) | 2025 |
| EarI | CTCTTC | 1 cut(s) | 2025 |
| Ecl136II | GAGCTC | 2 cut(s) | 582, 1239 |
| Eco105I | TACGTA | 1 cut(s) | 1591 |
| Eco130I | CCWWGG | 3 cut(s) | 111, 130, 325 |
| Eco24I | GRGCYC | 4 cut(s) | 584, 1241, 1489, 1584 |
| Eco47I | GGWCC | 1 cut(s) | 963 |
| Eco53kI | GAGCTC | 2 cut(s) | 582, 1239 |
| Eco57I | CTGAAG | 1 cut(s) | 886 |
| Eco88I | CYCGRG | 2 cut(s) | 1213, 2184 |
| EcoICRI | GAGCTC | 2 cut(s) | 582, 1239 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 35 |
| EcoRII | CCWGG | 6 cut(s) | 36, 93, 255, 770, 966, 1611 |
| EcoT14I | CCWWGG | 3 cut(s) | 111, 130, 325 |
| EcoT22I | ATGCAT | 1 cut(s) | 1294 |
| EcoT38I | GRGCYC | 4 cut(s) | 584, 1241, 1489, 1584 |
| ErhI | CCWWGG | 3 cut(s) | 111, 130, 325 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 518, 550, 1169, 1201 |
| FaqI | GGGAC | 1 cut(s) | 984 |
| FauI | CCCGC | 1 cut(s) | 785 |
| FauNDI | CATATG | 1 cut(s) | 1190 |
| FbaI | TGATCA | 1 cut(s) | 1333 |
| FblI | GTMKAC | 1 cut(s) | 815 |
| FokI | GGATG | 5 cut(s) | 76, 113, 395, 655, 1301 |
| FriOI | GRGCYC | 4 cut(s) | 584, 1241, 1489, 1584 |
| GsuI | CTGGAG | 1 cut(s) | 726 |
| HaeIII | GGCC | 3 cut(s) | 98, 1837, 2189 |
| HapII | CCGG | 3 cut(s) | 9, 872, 1345 |
| HincII | GTYRAC | 1 cut(s) | 816 |
| HindII | GTYRAC | 1 cut(s) | 816 |
| HindIII | AAGCTT | 3 cut(s) | 1031, 1055, 1243 |
| HinfI | GANTC | 9 cut(s) | 733, 797, 1008, 1111, 1211, 1232, 1413, 1668, 1784 |
| HpaII | CCGG | 3 cut(s) | 9, 872, 1345 |
| HphI | GGTGA | 2 cut(s) | 1475, 1601 |
| Hpy166II | GTNNAC | 4 cut(s) | 816, 1573, 1709, 2062 |
| Hpy8I | GTNNAC | 4 cut(s) | 816, 1573, 1709, 2062 |
| HpyAV | CCTTC | 9 cut(s) | 330, 439, 1274, 1347, 1571, 1610, 1636, 1836, 2200 |
| HpyCH4III | ACNGT | 7 cut(s) | 301, 514, 844, 992, 1201, 1713, 1948 |
| HpyCH4IV | ACGT | 1 cut(s) | 1590 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 95, 271, 425, 481, 707, 1023, 1164, 1505, 1514 |
| HpyF3I | CTNAG | 7 cut(s) | 275, 525, 535, 1220, 1246, 1256, 2252 |
| HpySE526I | ACGT | 1 cut(s) | 1590 |
| Kpn2I | TCCGGA | 1 cut(s) | 1344 |
| KpnI | GGTACC | 1 cut(s) | 562 |
| Ksp22I | TGATCA | 1 cut(s) | 1333 |
| LmnI | GCTCC | 4 cut(s) | 329, 448, 707, 874 |
| Lsp1109I | GCAGC | 9 cut(s) | 98, 103, 291, 1142, 1439, 1548, 1658, 1917, 2002 |
| LweI | GCATC | 8 cut(s) | 98, 417, 756, 1279, 1282, 1892, 1917, 2234 |
| MaeII | ACGT | 1 cut(s) | 1590 |
| MaeIII | GTNAC | 9 cut(s) | 79, 106, 140, 308, 385, 530, 832, 1713, 2163 |
| MfeI | CAATTG | 3 cut(s) | 864, 1318, 1494 |
| MflI | RGATCY | 7 cut(s) | 72, 229, 625, 1143, 1624, 1699, 2179 |
| MhlI | GDGCHC | 7 cut(s) | 55, 543, 584, 1241, 1305, 1489, 1584 |
| MlyI | GAGTC | 3 cut(s) | 806, 1205, 1677 |
| Mph1103I | ATGCAT | 1 cut(s) | 1294 |
| MroI | TCCGGA | 1 cut(s) | 1344 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1184, 1752 |
| MseI | TTAA | 8 cut(s) | 194, 780, 945, 998, 1004, 1388, 1559, 1719 |
| MslI | CAYNNNNRTG | 4 cut(s) | 206, 242, 302, 456 |
| MspA1I | CMGCKG | 1 cut(s) | 1260 |
| MspI | CCGG | 3 cut(s) | 9, 872, 1345 |
| MspR9I | CCNGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| MunI | CAATTG | 3 cut(s) | 864, 1318, 1494 |
| Mva1269I | GAATGC | 2 cut(s) | 135, 2109 |
| MvaI | CCWGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 95, 271, 425, 481, 707, 1023, 1164, 1505, 1514 |
| NcoI | CCATGG | 2 cut(s) | 111, 130 |
| NdeI | CATATG | 1 cut(s) | 1190 |
| NlaIV | GGNNCC | 7 cut(s) | 29, 158, 560, 965, 1343, 1972, 2127 |
| NmuCI | GTSAC | 3 cut(s) | 140, 1713, 2163 |
| NsiI | ATGCAT | 1 cut(s) | 1294 |
| NspI | RCATGY | 3 cut(s) | 455, 696, 2057 |
| NspV | TTCGAA | 1 cut(s) | 1829 |
| PaeI | GCATGC | 1 cut(s) | 2057 |
| PagI | TCATGA | 4 cut(s) | 354, 489, 1039, 1950 |
| PasI | CCCWGGG | 1 cut(s) | 967 |
| PctI | GAATGC | 2 cut(s) | 135, 2109 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1184, 1752 |
| PfeI | GAWTC | 6 cut(s) | 733, 1008, 1111, 1232, 1413, 1784 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 973 |
| PleI | GAGTC | 3 cut(s) | 805, 1205, 1676 |
| PpsI | GAGTC | 3 cut(s) | 805, 1205, 1676 |
| Ppu21I | YACGTR | 1 cut(s) | 1591 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1215 |
| PsiI | TTATAA | 2 cut(s) | 1097, 2000 |
| Psp124BI | GAGCTC | 2 cut(s) | 584, 1241 |
| Psp6I | CCWGG | 6 cut(s) | 36, 93, 255, 770, 966, 1611 |
| PspGI | CCWGG | 6 cut(s) | 36, 93, 255, 770, 966, 1611 |
| PspN4I | GGNNCC | 7 cut(s) | 29, 158, 560, 965, 1343, 1972, 2127 |
| PspPI | GGNCC | 2 cut(s) | 963, 2187 |
| PstI | CTGCAG | 2 cut(s) | 121, 1028 |
| PstNI | CAGNNNCTG | 3 cut(s) | 704, 973, 1023 |
| PsuI | RGATCY | 7 cut(s) | 72, 229, 625, 1143, 1624, 1699, 2179 |
| PvuII | CAGCTG | 1 cut(s) | 1260 |
| RsaI | GTAC | 5 cut(s) | 560, 959, 1589, 1868, 1941 |
| RsaNI | GTAC | 5 cut(s) | 559, 958, 1588, 1867, 1940 |
| RseI | CAYNNNNRTG | 4 cut(s) | 206, 242, 302, 456 |
| SacI | GAGCTC | 2 cut(s) | 584, 1241 |
| SalI | GTCGAC | 1 cut(s) | 814 |
| SaqAI | TTAA | 8 cut(s) | 194, 780, 945, 998, 1004, 1388, 1559, 1719 |
| Sau96I | GGNCC | 2 cut(s) | 963, 2187 |
| ScaI | AGTACT | 2 cut(s) | 959, 1941 |
| SchI | GAGTC | 3 cut(s) | 806, 1205, 1677 |
| ScrFI | CCNGG | 6 cut(s) | 38, 95, 257, 772, 968, 1613 |
| SduI | GDGCHC | 7 cut(s) | 55, 543, 584, 1241, 1305, 1489, 1584 |
| SfaNI | GCATC | 8 cut(s) | 98, 417, 756, 1279, 1282, 1892, 1917, 2234 |
| SfcI | CTRYAG | 2 cut(s) | 117, 1024 |
| SfuI | TTCGAA | 1 cut(s) | 1829 |
| SinI | GGWCC | 1 cut(s) | 963 |
| SmiI | ATTTAAAT | 1 cut(s) | 781 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 206, 242, 302, 456 |
| SmlI | CTYRAG | 2 cut(s) | 721, 1240 |
| SmoI | CTYRAG | 2 cut(s) | 721, 1240 |
| SnaBI | TACGTA | 1 cut(s) | 1591 |
| SpeI | ACTAGT | 1 cut(s) | 604 |
| SphI | GCATGC | 1 cut(s) | 2057 |
| SsiI | CCGC | 3 cut(s) | 240, 682, 792 |
| SspI | AATATT | 3 cut(s) | 378, 638, 2095 |
| SstI | GAGCTC | 2 cut(s) | 584, 1241 |
| StyD4I | CCNGG | 6 cut(s) | 36, 93, 255, 770, 966, 1611 |
| StyI | CCWWGG | 3 cut(s) | 111, 130, 325 |
| SwaI | ATTTAAAT | 1 cut(s) | 781 |
| TaaI | ACNGT | 7 cut(s) | 301, 514, 844, 992, 1201, 1713, 1948 |
| TaiI | ACGT | 1 cut(s) | 1593 |
| TaqI | TCGA | 7 cut(s) | 176, 815, 1235, 1434, 1671, 1796, 1829 |
| TatI | WGTACW | 3 cut(s) | 957, 1866, 1939 |
| TfiI | GAWTC | 6 cut(s) | 733, 1008, 1111, 1232, 1413, 1784 |
| Tru1I | TTAA | 8 cut(s) | 194, 780, 945, 998, 1004, 1388, 1559, 1719 |
| Tru9I | TTAA | 8 cut(s) | 194, 780, 945, 998, 1004, 1388, 1559, 1719 |
| TscAI | CASTG | 5 cut(s) | 55, 231, 1028, 1204, 1336 |
| TseFI | GTSAC | 3 cut(s) | 140, 1713, 2163 |
| Tsp45I | GTSAC | 3 cut(s) | 140, 1713, 2163 |
| TspRI | CASTG | 5 cut(s) | 55, 231, 1028, 1204, 1336 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 973 |
| VpaK11BI | GGWCC | 1 cut(s) | 963 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 35 |
| XapI | RAATTY | 5 cut(s) | 496, 782, 941, 1594, 2136 |
| XbaI | TCTAGA | 3 cut(s) | 878, 1456, 2098 |
| XceI | RCATGY | 3 cut(s) | 455, 696, 2057 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 419 |
| XmiI | GTMKAC | 1 cut(s) | 815 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1184, 1752 |
| ZrmI | AGTACT | 2 cut(s) | 959, 1941 |
| Zsp2I | ATGCAT | 1 cut(s) | 1294 |