Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005606

Physical Location & Seq

Genomic Coordinates Forward (+)

50019242 .. 50021754

Gene Structure 2513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003563

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGAAAATCGGCTGCGACGTCGATGGGAACCTCAACCAGGGAAAGTTCAGTGCCCCTATGCCTTGGATTGGGATTTATGTAACAGCAGCATCCTTGGCATGTCTAGTTACAATGGCTGCAGATGTCATCCATGGCATTCGTCACCGGAAACTCTGGTTCCCTTGCAAGTACTTCTCAATCAATGCAACTTCTCTGACCCTGATAGCTGTGGCAATCAAATTGTCAGTGGATCTAAACACCGCCATGCCTAGCCGCCAGGATCAGCTCGCAAAGCTCAGCAGCTCGGTCTTGGTCTGCACAGTAATGGGTAACTCTATGCCTTCCCTTGGAGCTATGGAAAATGAAGAACTATTCATGAATGTTATTGCTTTCGGCATATTAGTAGTTACCCTTATTGTGAATATCTGCATCCAATTAGCTACTGGTGCAATCTTTGTTTTCTGGAAGGAGCATGCTTGTGTTATGTTTATCATGCTTGTTTTGCTTATCATGCTGAGTTTCTCTGCTTTAGTTGTTCCGATTTCTAAGCGTTACTTAGAGCACAAGTACAGCAAGAGGTATCAATTAGCTCTGAAAGAGAGCTCAAATGAAACTGGTAAAAGACTTGTTTGCAAAATTAGGGAGGATCTGATGAAATATTGGATGATGGCTCATACCTCTAGCCCCCAGTTTGTTATGGGTCGATCAGCGACATGCACAGCTTCTGGAGCAATCTGTCTCTTGAGTTCACTGATTCTAGCAGAGGCCATACTTCGAACTTACTTGATGCCCTGGTCATTTAAATTTTGTAGCGGTGAGTCTGACTACAAGTGGTCGACCACTTTGGTTCTTGTTACACAGACAGTAGCAGTAGCAGTAGGAACAATTGCTCCAGCATCTAGATGGTTCATCGCCATAAACTTCAGGTGTGCAAAAAAAGGAAATGCAACCTACAAAGGAGGAAATGCAACCAACAAAGGAGAATTTAAAGTAGAAAAGTACTGGATCCAGGGACTAGTGGAGTTGAAAGACTGTCCATTAACTTTAAGAATCAGAAGCAGGCACTGCAGGAAACTTGCTCATGACACTAAAAATAAACTTTTGGACTTGTGTATTGGAATGCAGAAAGGAAATGTCATAATGAGCAAAGCAATTCGGCTTATTTCCATTTTCTTTGTAAGCAAGATCTTGATATGCTGCGAGTACTTCTGCAAGGAGTGGAAGAAGAATTTCAAATGCAACACTGTTTTCAACGACTCGAGCCTAGAGTCACCACAATCAAGCTCAAGCTTAGAACATCTTAGCTGTTATGTTTTGCATCTTGAAGGGGAGGATGCATTAGTTGGGCACATGACAAAAAGCAATTGTGATGCTACTGATCATTGGTTCCAGAGGGGAAGGAGAAGAGAGCCTAAACATCTGATCAAATTGTTGGAGAAATCAACATTTTCACAAAGATTTAAAGGAGTAGCAGCTTTTGACAACGACAAAGTTCCCTCTCTAGATGGTGAAGAACCTCCAAATTGTTGGGCTCTACCTGTTGCAACACTAGCCAGTATTGCTCTTGCACTTCCAAACAGCAGCAGTTCTTCAATAAAAGGGTTAATGCGTGGTGTACACGAAGGGCTCATGTACATAAATTTCATTGAAAATCACCTTGAAAGTAAAGATCTTACCAACATTAGGAAGGCAGCAACCCATGTCTGGCTAGGAGTTGATCTCTATCACACATGGCTGGATGTGGATCTCCATAAACTGTCACTTCAGGGGAAAAGCTCAAAGGAAATACTTGAAGAACTTTCTGAAACTGCAAAAGTCAAATACGAAGAATCTAAAAAGAGCCAAACAGCTATAAATGCATGTATCAGAGAGACTCCTTCGAAATGGCCCGTAAAGGAATTAGCTGCTAATTCCATGTATAGGATATGTCAAACCATTCTGCTAAACCATAGAGGCAGCATCGATCAAACAGATGAAAGACTACTTGAAGTACTGACAGTCATGATCGCTGACATTCTTGGTGCCTGTCTCACTAACTTGCAGCAAGTTATAAGCACAAAGTGTTTGAACAGCACCATTGAAGATAGGGAGGAAAGTGTGAGGCATGCAGTTCACATTCTAGGGAAAACTGAAAAGATTCTGAATATTCTAGACCAGAGCATTCCCCGAAGTTTGGAACCTCACCAAATTTCATCGATTGATGAGTGGCGTTTGTCACTCAAAAGGGAAGACCCTTGGGCCTTCCCTTCTTCATCTTCATCAGAGAGTGACAGAGCCTCTCCTGTTTCAAATGACTTCTACCTGAGCATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

765

Amino Acids

85.67

Weight (kDa)

8.71

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17250 AT4G17250 AT4G17250 AT5G47580
fragaria_vesca	FvH4_3g26880
malus_domestica	MD06G1060700.v1.1
prunus_persica	Prupe.5G071700_v2.0.a1 Prupe.5G071900_v2.0.a1
pyrus_communis	pycom06g05020 pycom06g05070
rosa_chinensis	RchiOBHm_Chr7g0202951 RchiOBHm_Chr7g0202961
rosa_laevigata	RLG00000003561 RLG00000003563
rosa_multiflora	Rmu_sc0007263.1_g000002 Rmu_sc0008159.1_g000003 Rmu_sc0008159.1_g000011 Rmu_sc0013377.1_g000004
rosa_roxburghii	Rroxscaffold_3G00254140 Rroxscaffold_3G00254160
rosa_rugosa	Rorug07G0074000
rosa_samantha	Rh7AG202100 Rh7BG202200 Rh7CG213200 Rh7DG209000 Rh7DG209200
rosa_wichuraiana	Rw7G017660 Rw7G017670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2030
AatII	GACGTC	1 cut(s)	21
AccB1I	GGYRCC	1 cut(s)	2000
AccI	GTMKAC	1 cut(s)	815
AciI	CCGC	3 cut(s)	240, 253, 792
AclWI	GGATC	6 cut(s)	237, 267, 633, 979, 992, 1731
AcsI	RAATTY	5 cut(s)	782, 962, 1207, 1618, 2166
AcuI	CTGAAG	2 cut(s)	886, 1727
AcyI	GRCGYC	1 cut(s)	18
AdeI	CACNNNGTG	1 cut(s)	2040
AfaI	GTAC	7 cut(s)	170, 548, 980, 1184, 1596, 1613, 1971
AfiI	CCNNNNNNNGG	7 cut(s)	37, 68, 326, 1662, 1683, 1899, 2152
AhlI	ACTAGT	1 cut(s)	994
AjnI	CCWGG	4 cut(s)	36, 255, 770, 987
AloI	GAACNNNNNNTCC	2 cut(s)	853, 885
Alw21I	GWGCWC	2 cut(s)	543, 584
Alw26I	GTCTC	3 cut(s)	722, 1844, 2012
AlwI	GGATC	6 cut(s)	237, 267, 633, 979, 992, 1731
AlwNI	CAGNNNCTG	2 cut(s)	704, 1044
Ama87I	CYCGRG	1 cut(s)	1237
AoxI	GGCC	3 cut(s)	744, 1865, 2217
ApoI	RAATTY	5 cut(s)	782, 962, 1207, 1618, 2166
Asp700I	GAANNNNTTC	2 cut(s)	1208, 2115
AspS9I	GGNCC	2 cut(s)	1866, 2217
AsuHPI	GGTGA	6 cut(s)	134, 806, 1242, 1499, 1625, 2153
AsuII	TTCGAA	2 cut(s)	754, 1859
AvaI	CYCGRG	1 cut(s)	1237
BaeGI	GKGCMC	2 cut(s)	55, 1329
BamHI	GGATCC	1 cut(s)	984
BanI	GGYRCC	1 cut(s)	2000
BanII	GRGCYC	3 cut(s)	584, 1513, 1608
BbsI	GAAGAC	1 cut(s)	2214
Bbv12I	GWGCWC	2 cut(s)	543, 584
BccI	CCATC	4 cut(s)	17, 640, 876, 1478
BciT130I	CCWGG	4 cut(s)	38, 257, 772, 989
BclI	TGATCA	2 cut(s)	1357, 1401
BcoDI	GTCTC	3 cut(s)	722, 1844, 2012
BcuI	ACTAGT	1 cut(s)	994
BfmI	CTRYAG	2 cut(s)	117, 1045
BglII	AGATCT	2 cut(s)	1164, 1648
BlpI	GCTNAGC	1 cut(s)	275
BmcAI	AGTACT	4 cut(s)	170, 980, 1184, 1971
Bme1390I	CCNGG	4 cut(s)	38, 257, 772, 989
BmeT110I	CYCGRG	1 cut(s)	1237
BmgT120I	GGNCC	2 cut(s)	1866, 2217
BmiI	GGNNCC	6 cut(s)	29, 158, 986, 1367, 2002, 2157
BmrFI	CCNGG	4 cut(s)	38, 257, 772, 989
BmrI	ACTGGG	1 cut(s)	661
BmsI	GCATC	8 cut(s)	98, 417, 756, 884, 1303, 1306, 1339, 1947
BmuI	ACTGGG	1 cut(s)	661
BpiI	GAAGAC	1 cut(s)	2214
BplI	GAGNNNNNCTC	2 cut(s)	1683, 1715
BpmI	CTGGAG	2 cut(s)	726, 855
Bpu10I	CCTNAGC	1 cut(s)	2282
Bpu1102I	GCTNAGC	1 cut(s)	275
Bpu14I	TTCGAA	2 cut(s)	754, 1859
BpuEI	CTTGAG	2 cut(s)	742, 1249
Bsa29I	ATCGAT	2 cut(s)	1941, 2174
BsaBI	GATNNNNATC	2 cut(s)	1701, 1722
BsaHI	GRCGYC	1 cut(s)	18
BsaJI	CCNNGG	8 cut(s)	37, 62, 93, 130, 325, 770, 988, 2213
BsaWI	WCCGGW	1 cut(s)	144
BsaXI	ACNNNNNCTCC	2 cut(s)	853, 883
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 68, 326, 1662, 1683, 1899, 2152
Bse1I	ACTGG	5 cut(s)	427, 598, 667, 986, 1533
Bse8I	GATNNNNATC	2 cut(s)	1701, 1722
BseBI	CCWGG	4 cut(s)	38, 257, 772, 989
BseCI	ATCGAT	2 cut(s)	1941, 2174
BseDI	CCNNGG	8 cut(s)	37, 62, 93, 130, 325, 770, 988, 2213
BseGI	GGATG	6 cut(s)	89, 126, 408, 648, 1318, 1723
BseJI	GATNNNNATC	2 cut(s)	1701, 1722
BseLI	CCNNNNNNNGG	7 cut(s)	37, 68, 326, 1662, 1683, 1899, 2152
BseMII	CTCAG	3 cut(s)	289, 485, 2273
BseNI	ACTGG	5 cut(s)	427, 598, 667, 986, 1533
BseSI	GKGCMC	2 cut(s)	55, 1329
BsgI	GTGCAG	1 cut(s)	280
BshFI	GGCC	3 cut(s)	746, 1867, 2219
BshNI	GGYRCC	1 cut(s)	2000
BshVI	ATCGAT	2 cut(s)	1941, 2174
BsiHKAI	GWGCWC	2 cut(s)	543, 584
BsiHKCI	CYCGRG	1 cut(s)	1237
BsiSI	CCGG	1 cut(s)	145
BslFI	GGGAC	1 cut(s)	1005
BslI	CCNNNNNNNGG	7 cut(s)	37, 68, 326, 1662, 1683, 1899, 2152
BsmAI	GTCTC	3 cut(s)	722, 1844, 2012
BsmFI	GGGAC	1 cut(s)	1005
BsmI	GAATGC	3 cut(s)	135, 1104, 2139
BsnI	GGCC	3 cut(s)	746, 1867, 2219
BsoBI	CYCGRG	1 cut(s)	1237
Bsp119I	TTCGAA	2 cut(s)	754, 1859
Bsp1286I	GDGCHC	6 cut(s)	55, 543, 584, 1329, 1513, 1608
Bsp1407I	TGTACA	2 cut(s)	1594, 1611
Bsp1720I	GCTNAGC	1 cut(s)	275
Bsp19I	CCATGG	1 cut(s)	130
BspACI	CCGC	3 cut(s)	240, 253, 792
BspANI	GGCC	3 cut(s)	746, 1867, 2219
BspCNI	CTCAG	3 cut(s)	288, 486, 2274
BspDI	ATCGAT	2 cut(s)	1941, 2174
BspHI	TCATGA	3 cut(s)	354, 1060, 1980
BspLI	GGNNCC	6 cut(s)	29, 158, 986, 1367, 2002, 2157
BspMAI	CTGCAG	2 cut(s)	121, 1049
BspPI	GGATC	6 cut(s)	237, 267, 633, 979, 992, 1731
BspT104I	TTCGAA	2 cut(s)	754, 1859
BspT107I	GGYRCC	1 cut(s)	2000
BsrGI	TGTACA	2 cut(s)	1594, 1611
BsrI	ACTGG	5 cut(s)	427, 598, 667, 986, 1533
BssECI	CCNNGG	8 cut(s)	37, 62, 93, 130, 325, 770, 988, 2213
BssNI	GRCGYC	1 cut(s)	18
BssT1I	CCWWGG	5 cut(s)	62, 93, 130, 325, 2213
Bst2UI	CCWGG	4 cut(s)	38, 257, 772, 989
Bst4CI	ACNGT	6 cut(s)	301, 844, 1013, 1225, 1737, 1978
Bst6I	CTCTTC	1 cut(s)	1378
BstACI	GRCGYC	1 cut(s)	18
BstAPI	GCANNNNNTGC	1 cut(s)	1044
BstAUI	TGTACA	2 cut(s)	1594, 1611
BstBI	TTCGAA	2 cut(s)	754, 1859
BstC8I	GCNNGC	4 cut(s)	267, 453, 1040, 2085
BstDEI	CTNAG	7 cut(s)	275, 494, 525, 535, 1270, 1280, 2282
BstDSI	CCRYGG	1 cut(s)	130
BstENI	CCTNNNNNAGG	1 cut(s)	35
BstF5I	GGATG	6 cut(s)	89, 126, 408, 648, 1318, 1723
BstMAI	GTCTC	3 cut(s)	722, 1844, 2012
BstNI	CCWGG	4 cut(s)	38, 257, 772, 989
BstNSI	RCATGY	5 cut(s)	102, 455, 696, 1842, 2087
BstSCI	CCNGG	4 cut(s)	36, 255, 770, 987
BstSFI	CTRYAG	2 cut(s)	117, 1045
BstSLI	GKGCMC	2 cut(s)	55, 1329
BstV2I	GAAGAC	1 cut(s)	2214
BstX2I	RGATCY	6 cut(s)	229, 625, 984, 1164, 1648, 1723
BstXI	CCANNNNNNTGG	1 cut(s)	1506
BstYI	RGATCY	6 cut(s)	229, 625, 984, 1164, 1648, 1723
Bsu15I	ATCGAT	2 cut(s)	1941, 2174
BsuRI	GGCC	3 cut(s)	746, 1867, 2219
BsuTUI	ATCGAT	2 cut(s)	1941, 2174
BtgI	CCRYGG	1 cut(s)	130
BtgZI	GCGATG	1 cut(s)	874
BtsCI	GGATG	6 cut(s)	89, 126, 408, 648, 1318, 1723
BtsI	GCAGTG	1 cut(s)	1042
BtsIMutI	CAGTG	5 cut(s)	55, 231, 728, 1042, 1221
Cac8I	GCNNGC	4 cut(s)	267, 453, 1040, 2085
CaiI	CAGNNNCTG	2 cut(s)	704, 1044
CciI	TCATGA	3 cut(s)	354, 1060, 1980
Cfr13I	GGNCC	2 cut(s)	1866, 2217
ClaI	ATCGAT	2 cut(s)	1941, 2174
Csp6I	GTAC	7 cut(s)	169, 547, 979, 1183, 1595, 1612, 1970
CviQI	GTAC	7 cut(s)	169, 547, 979, 1183, 1595, 1612, 1970
DdeI	CTNAG	7 cut(s)	275, 494, 525, 535, 1270, 1280, 2282
DraI	TTTAAA	3 cut(s)	781, 967, 1441
DraIII	CACNNNGTG	1 cut(s)	2040
Eam1104I	CTCTTC	1 cut(s)	1378
EarI	CTCTTC	1 cut(s)	1378
Ecl136II	GAGCTC	1 cut(s)	582
Eco130I	CCWWGG	5 cut(s)	62, 93, 130, 325, 2213
Eco24I	GRGCYC	3 cut(s)	584, 1513, 1608
Eco53kI	GAGCTC	1 cut(s)	582
Eco57I	CTGAAG	2 cut(s)	886, 1727
Eco88I	CYCGRG	1 cut(s)	1237
EcoICRI	GAGCTC	1 cut(s)	582
EcoNI	CCTNNNNNAGG	1 cut(s)	35
EcoRII	CCWGG	4 cut(s)	36, 255, 770, 987
EcoT14I	CCWWGG	5 cut(s)	62, 93, 130, 325, 2213
EcoT22I	ATGCAT	2 cut(s)	1318, 1840
EcoT38I	GRGCYC	3 cut(s)	584, 1513, 1608
ErhI	CCWWGG	5 cut(s)	62, 93, 130, 325, 2213
FalI	AAGNNNNNCTT	2 cut(s)	518, 550
FaqI	GGGAC	1 cut(s)	1005
FbaI	TGATCA	2 cut(s)	1357, 1401
FblI	GTMKAC	1 cut(s)	815
FokI	GGATG	6 cut(s)	76, 113, 395, 655, 1325, 1730
FriOI	GRGCYC	3 cut(s)	584, 1513, 1608
GsuI	CTGGAG	2 cut(s)	726, 855
HaeIII	GGCC	3 cut(s)	746, 1867, 2219
HapII	CCGG	1 cut(s)	145
Hin1I	GRCGYC	1 cut(s)	18
HincII	GTYRAC	1 cut(s)	816
HindII	GTYRAC	1 cut(s)	816
HindIII	AAGCTT	1 cut(s)	1267
HinfI	GANTC	8 cut(s)	733, 797, 1029, 1235, 1247, 1808, 1852, 2116
HpaII	CCGG	1 cut(s)	145
HphI	GGTGA	6 cut(s)	134, 806, 1242, 1499, 1625, 2153
Hpy166II	GTNNAC	5 cut(s)	728, 816, 1595, 1597, 2092
Hpy8I	GTNNAC	5 cut(s)	728, 816, 1595, 1597, 2092
Hpy99I	CGWCG	2 cut(s)	20, 23
HpyAV	CCTTC	9 cut(s)	330, 439, 1298, 1371, 1595, 1660, 1866, 2230, 2235
HpyCH4III	ACNGT	6 cut(s)	301, 844, 1013, 1225, 1737, 1978
HpyCH4IV	ACGT	1 cut(s)	18
HpyF3I	CTNAG	7 cut(s)	275, 494, 525, 535, 1270, 1280, 2282
HpySE526I	ACGT	1 cut(s)	18
Hsp92I	GRCGYC	1 cut(s)	18
Ksp22I	TGATCA	2 cut(s)	1357, 1401
LmnI	GCTCC	4 cut(s)	329, 448, 707, 874
LweI	GCATC	8 cut(s)	98, 417, 756, 884, 1303, 1306, 1339, 1947
MaeII	ACGT	1 cut(s)	18
MfeI	CAATTG	2 cut(s)	864, 1342
MflI	RGATCY	6 cut(s)	229, 625, 984, 1164, 1648, 1723
MhlI	GDGCHC	6 cut(s)	55, 543, 584, 1329, 1513, 1608
MlyI	GAGTC	4 cut(s)	806, 1229, 1256, 1846
MmeI	TCCRAC	1 cut(s)	1392
Mph1103I	ATGCAT	2 cut(s)	1318, 1840
MroXI	GAANNNNTTC	2 cut(s)	1208, 2115
MseI	TTAA	6 cut(s)	780, 966, 1019, 1025, 1440, 1583
MslI	CAYNNNNRTG	4 cut(s)	242, 302, 456, 880
MspI	CCGG	1 cut(s)	145
MspR9I	CCNGG	4 cut(s)	38, 257, 772, 989
MunI	CAATTG	2 cut(s)	864, 1342
Mva1269I	GAATGC	3 cut(s)	135, 1104, 2139
MvaI	CCWGG	4 cut(s)	38, 257, 772, 989
NcoI	CCATGG	1 cut(s)	130
NlaIV	GGNNCC	6 cut(s)	29, 158, 986, 1367, 2002, 2157
NmuCI	GTSAC	5 cut(s)	140, 1248, 1737, 2193, 2246
NsiI	ATGCAT	2 cut(s)	1318, 1840
NspI	RCATGY	5 cut(s)	102, 455, 696, 1842, 2087
NspV	TTCGAA	2 cut(s)	754, 1859
PaeI	GCATGC	2 cut(s)	455, 2087
PaeR7I	CTCGAG	1 cut(s)	1237
PagI	TCATGA	3 cut(s)	354, 1060, 1980
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PctI	GAATGC	3 cut(s)	135, 1104, 2139
PdmI	GAANNNNTTC	2 cut(s)	1208, 2115
PfeI	GAWTC	4 cut(s)	733, 1029, 1808, 2116
PleI	GAGTC	4 cut(s)	805, 1229, 1255, 1846
PpsI	GAGTC	4 cut(s)	805, 1229, 1255, 1846
PsiI	TTATAA	1 cut(s)	2030
Psp124BI	GAGCTC	1 cut(s)	584
Psp6I	CCWGG	4 cut(s)	36, 255, 770, 987
PspGI	CCWGG	4 cut(s)	36, 255, 770, 987
PspN4I	GGNNCC	6 cut(s)	29, 158, 986, 1367, 2002, 2157
PspPI	GGNCC	2 cut(s)	1866, 2217
PspXI	VCTCGAGB	1 cut(s)	1237
PstI	CTGCAG	2 cut(s)	121, 1049
PstNI	CAGNNNCTG	2 cut(s)	704, 1044
PsuI	RGATCY	6 cut(s)	229, 625, 984, 1164, 1648, 1723
RsaI	GTAC	7 cut(s)	170, 548, 980, 1184, 1596, 1613, 1971
RsaNI	GTAC	7 cut(s)	169, 547, 979, 1183, 1595, 1612, 1970
RseI	CAYNNNNRTG	4 cut(s)	242, 302, 456, 880
SacI	GAGCTC	1 cut(s)	584
SalI	GTCGAC	1 cut(s)	814
SaqAI	TTAA	6 cut(s)	780, 966, 1019, 1025, 1440, 1583
Sau96I	GGNCC	2 cut(s)	1866, 2217
ScaI	AGTACT	4 cut(s)	170, 980, 1184, 1971
SchI	GAGTC	4 cut(s)	806, 1229, 1256, 1846
ScrFI	CCNGG	4 cut(s)	38, 257, 772, 989
SduI	GDGCHC	6 cut(s)	55, 543, 584, 1329, 1513, 1608
SfaNI	GCATC	8 cut(s)	98, 417, 756, 884, 1303, 1306, 1339, 1947
SfcI	CTRYAG	2 cut(s)	117, 1045
Sfr274I	CTCGAG	1 cut(s)	1237
SfuI	TTCGAA	2 cut(s)	754, 1859
SlaI	CTCGAG	1 cut(s)	1237
SmiI	ATTTAAAT	1 cut(s)	781
SmiMI	CAYNNNNRTG	4 cut(s)	242, 302, 456, 880
SmlI	CTYRAG	3 cut(s)	721, 1237, 1264
SmoI	CTYRAG	3 cut(s)	721, 1237, 1264
SpeI	ACTAGT	1 cut(s)	994
SphI	GCATGC	2 cut(s)	455, 2087
SsiI	CCGC	3 cut(s)	240, 253, 792
SspI	AATATT	2 cut(s)	638, 2125
SstI	GAGCTC	1 cut(s)	584
StyD4I	CCNGG	4 cut(s)	36, 255, 770, 987
StyI	CCWWGG	5 cut(s)	62, 93, 130, 325, 2213
SwaI	ATTTAAAT	1 cut(s)	781
TaaI	ACNGT	6 cut(s)	301, 844, 1013, 1225, 1737, 1978
TaiI	ACGT	1 cut(s)	21
TaqI	TCGA	8 cut(s)	21, 682, 754, 815, 1238, 1859, 1941, 2174
TaqII	GACCGA	1 cut(s)	274
TatI	WGTACW	7 cut(s)	168, 546, 978, 1182, 1594, 1611, 1969
TauI	GCSGC	1 cut(s)	255
TfiI	GAWTC	4 cut(s)	733, 1029, 1808, 2116
Tru1I	TTAA	6 cut(s)	780, 966, 1019, 1025, 1440, 1583
Tru9I	TTAA	6 cut(s)	780, 966, 1019, 1025, 1440, 1583
TscAI	CASTG	5 cut(s)	55, 231, 735, 1049, 1228
TseFI	GTSAC	5 cut(s)	140, 1248, 1737, 2193, 2246
Tsp45I	GTSAC	5 cut(s)	140, 1248, 1737, 2193, 2246
TspRI	CASTG	5 cut(s)	55, 231, 735, 1049, 1228
XagI	CCTNNNNNAGG	1 cut(s)	35
XapI	RAATTY	5 cut(s)	782, 962, 1207, 1618, 2166
XbaI	TCTAGA	3 cut(s)	878, 1480, 2128
XceI	RCATGY	5 cut(s)	102, 455, 696, 1842, 2087
XcmI	CCANNNNNNNNNTGG	2 cut(s)	419, 879
XhoI	CTCGAG	1 cut(s)	1237
XmiI	GTMKAC	1 cut(s)	815
XmnI	GAANNNNTTC	2 cut(s)	1208, 2115
ZraI	GACGTC	1 cut(s)	19
ZrmI	AGTACT	4 cut(s)	170, 980, 1184, 1971
Zsp2I	ATGCAT	2 cut(s)	1318, 1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.