Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003248

Physical Location & Seq

Genomic Coordinates Reverse (-)

20746548 .. 20752529

Gene Structure 5982 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g27700.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGGGACCTCAAACTCCAAAATTGAGGAAGACAAGGCCCTGCAGCTCTGTCGAGAAAGGAAAAAGTTTGTTAAGCAGGCGCTTGATGGCAGGTGCTCCCTCGCAGCCACTCACGATATGTATATTCAATCACTCAAGAGTACCGGAACTGCTCTTAGGAAATTCGTCGACTCTTCTGGCACGGCTCCTCTTGATTCTTCTTTGTACACTTCCACTAGTGCAACCCCTGAGCCTCTTCTTCAAATTCACAAGTCACTCTCTCATTTCTCCTTTTCTTCCCCGTCTGCGTCCCAACGCATTGATGCCACTGATAATTACTCTCCCTCTCCTTCTCCTCCCAATTCTACTCTATTTCATGCCAATCATATGAAAGCCAGGGGTAGCTTTTCTAAAAAGGTCGAAGAAAAACCTCCTATCTCTAGTACTGCAACAGTGACCTCCTCTAGTACCCCACAGAATACCACGCCTCGCTCTGTTGGAAATTCCGAAACATCACCATTTGGAGATTCTTCACTCCCATCCGAAACTCCACCATGGGATTACTTTGGTATTTTTCATCCGATTGACCATCAGTTCTCTTCTCAAGAAGGGAAGACCATGAACCAAAGTTTTGAACATACTGATGACATAAGACGGCTTAGGGAAGAGGAGGGAATTCCTGACCTGGAAGATGAAGAAGAGAAGGCCACTTTTCATGATAGGGAAGACTCTCACGATTCTGAAGATGAATTTGATGAGCCAGCTACAGACACTCTGGTTCGAAGTTTTGAAAACTTTAATAGAGTACATGATCATGCTGAAGCTAGTGCTTCACCTACAGTACCTTCTGCGGGAAGTGCAACTTCAGAAACTGAGTTGAAAGTACAGAAAAGCAACTCTCCTGATTTGTCGCCATTGAGAGCCCCATCATCAGTAGTTGTGCCTGAAACTGACTCTAATAAAGCTACATTGAAGGAAGATTGCTTGGAAAGTAAGGTGGCCCCAAAAGATCTTGTTTTAAGCATGAAAGATATTGAATTTCTCTTCATAAAAGCTTACGAGTCTGGTAAAGAAATTCCTAAGATGCTTGAAGCGAATAAGTTGCATTTTCGACCAATATTCCAAGCAAAAGAAACAGGTGGATCATTTTCTTCTACATTCTTGAAGGCTTGTTTCTCCTGTGGTGAAGACCCTAGTCAAGTTCAGGAAGAGCCTGCTCAAAATTCCGTGAAATACTTAACTTGGCATAGGACCACATCGTCTCGATCCTCTTCATCAAGGAATCTCTTGGGAGCAAACTTAAAAGATGATAGTGAGAATCTTGCTGGCAACCTCTTTGATAACTTCTGCATGATCTCAGGCAGTCATGCCTCAACCTTGGATAGGTTATATGCGTGGGAGAGGAAGCTTTATGATGAGGTTAAGGCTAGTGAGATGGTCAGAAGGGATTACGACTTGAAGTGTAAGATATTAAGGCAACTAGAATCAAAAGGAGAAAGTTCTCAACAAGTTGATAAAACTCGCGCTGTTGTTAAGGATCTACATTCAAGAATCAGAGTTGCTATTCACAGGATTGATTCTATATCAAAGAGGATTGAAAATATACGAGACAGAGAGCTCCAGCCACAACTCGAGGAGTTGATTCATGGGTTAACTCGGATGTGGGAAGTGATGCTTGAATGTCACAAGCTTCAGTTTCTAATTATCTCCATAGCTTACCACAATGGCAACACTAAGATATCTGTACAGTCAGATTCACATCGTCAGATTACTCTCTATCTTGCAGATGAACTCAGCAATCTATCCTCAAGTTTTAGTAAGTGGATCGATGCTCAAAAGTCCTATTTGCAGTCTATAAATGGATGGCTTTTGAAATGTGTATCCATTGCTGAGAAGTCTTCCAAAAAGAAAAGGAGGCAACCAGAAAAAAACCCCTTGAGATTCTGTGGCCCTCCAATATATGCCACATGTGGTGTCTGGTTTGATAAGCTTGAGACTTTGCCTGCCAGTGAAGTTACAGAGGCTATAAACACTTTAGAAACTGAAATTGCCAGTTTTGTACCTCGCCAAGAAAGGAAAGAGGGTAAACATCCAAACTATTCAGGTTTAACATCTCGCAAGGATGATAGTGGAATTGACTCTGCAGTTAATATGTTGAGAGATGAAGTTTTGCCTTCCTCGATCTCCAGTTTTGATCGTTTCCAGACAAGCTTGGCGGGGTTTTGTGGTAAGTTGAACAAGTTTGCAGAGGCTTCTGTTAAGATGTATGCAGAAGTTCAGGTGGCCATTCAACGTTCAAAGAGCAATTATGACCAGATTAAATCTAAATCTGGAGTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

774

Amino Acids

86.53

Weight (kDa)

6.11

Isoelectric Point (pI)

58.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 57	2.7e-23	Protein of unknown function (DUF630)
DUF632	PF04782	333 - 676	1.1e-113	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27090 AT2G27090
fragaria_vesca	FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700
malus_domestica	MD00G1106500.v1.1 MD11G1182800.v1.1 MD11G1182900.v1.1
prunus_persica	Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1
pyrus_communis	pycom11g15930 pycom11g15950 pycom5153684g00360
rosa_chinensis	RchiOBHm_Chr5g0049991
rosa_laevigata	RLG00000034675
rosa_multiflora	Rmu_sc0000333.1_g000025
rosa_roxburghii	Rroxscaffold_1G00031170
rosa_rugosa	Rorug05G0256300 Rorug05G0256400.1
rosa_samantha	Rh5AG329300 Rh5BG340200 Rh5CG366200 Rh5DG352800
rosa_wichuraiana	Rw5G031110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	81
AasI	GACNNNNNNGTC	1 cut(s)	1237
Acc36I	ACCTGC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	168
AccII	CGCG	1 cut(s)	1503
AciI	CCGC	2 cut(s)	830, 2195
AclI	AACGTT	1 cut(s)	2272
AclWI	GGATC	4 cut(s)	1129, 1239, 1524, 1811
AcoI	YGGCCR	1 cut(s)	2262
AcsI	RAATTY	8 cut(s)	161, 243, 481, 654, 728, 1016, 1053, 1201
AcuI	CTGAAG	4 cut(s)	741, 819, 828, 1655
AfaI	GTAC	9 cut(s)	142, 206, 424, 448, 786, 822, 864, 1725, 2040
AfiI	CCNNNNNNNGG	2 cut(s)	830, 1362
AflIII	ACRYGT	1 cut(s)	1946
AhlI	ACTAGT	1 cut(s)	215
AjnI	CCWGG	2 cut(s)	374, 663
Alw21I	GWGCWC	2 cut(s)	98, 1599
Alw26I	GTCTC	3 cut(s)	1245, 1581, 1967
AlwI	GGATC	4 cut(s)	1129, 1239, 1524, 1811
AlwNI	CAGNNNCTG	1 cut(s)	851
Ama87I	CYCGRG	1 cut(s)	1610
AoxI	GGCC	5 cut(s)	36, 684, 978, 1927, 2262
ApeKI	GCWGC	2 cut(s)	43, 104
ApoI	RAATTY	8 cut(s)	161, 243, 481, 654, 728, 1016, 1053, 1201
AspLEI	GCGC	2 cut(s)	82, 1505
AspS9I	GGNCC	5 cut(s)	6, 37, 979, 1230, 1928
AsuHPI	GGTGA	3 cut(s)	486, 804, 1175
AsuII	TTCGAA	1 cut(s)	760
AvaI	CYCGRG	1 cut(s)	1610
AvaII	GGWCC	2 cut(s)	6, 1230
BalI	TGGCCA	1 cut(s)	2264
BanII	GRGCYC	2 cut(s)	904, 1599
BbsI	GAAGAC	5 cut(s)	36, 599, 711, 1173, 1869
Bbv12I	GWGCWC	2 cut(s)	98, 1599
BbvI	GCAGC	2 cut(s)	55, 116
BccI	CCATC	6 cut(s)	80, 526, 576, 913, 1408, 1836
BceAI	ACGGC	2 cut(s)	198, 650
BcgI	CGANNNNNNTGC	4 cut(s)	32, 66, 1063, 1097
BciT130I	CCWGG	2 cut(s)	376, 665
BciVI	GTATCC	1 cut(s)	1870
BclI	TGATCA	1 cut(s)	790
BcoDI	GTCTC	3 cut(s)	1245, 1581, 1967
BcuI	ACTAGT	1 cut(s)	215
BfaI	CTAG	7 cut(s)	216, 420, 444, 804, 1173, 1407, 1460
BfmI	CTRYAG	4 cut(s)	41, 744, 816, 2121
BfoI	RGCGCY	1 cut(s)	83
BfuAI	ACCTGC	1 cut(s)	81
BfuI	GTATCC	1 cut(s)	1870
BglII	AGATCT	1 cut(s)	988
BisI	GCNGC	2 cut(s)	44, 105
BlsI	GCNGC	2 cut(s)	45, 106
BmcAI	AGTACT	1 cut(s)	424
Bme1390I	CCNGG	2 cut(s)	376, 665
Bme18I	GGWCC	2 cut(s)	6, 1230
BmeT110I	CYCGRG	1 cut(s)	1610
BmgT120I	GGNCC	5 cut(s)	6, 37, 979, 1230, 1928
BmiI	GGNNCC	3 cut(s)	7, 186, 981
BmrFI	CCNGG	2 cut(s)	376, 665
BmsI	GCATC	4 cut(s)	292, 1053, 1641, 1798
BoxI	GACNNNNGTC	1 cut(s)	1173
BpiI	GAAGAC	5 cut(s)	36, 599, 711, 1173, 1869
BpmI	CTGGAG	2 cut(s)	1583, 2149
Bpu10I	CCTNAGC	2 cut(s)	228, 638
Bpu14I	TTCGAA	1 cut(s)	760
BpuEI	CTTGAG	5 cut(s)	119, 567, 1771, 1936, 1991
Bsa29I	ATCGAT	1 cut(s)	1806
BsaBI	GATNNNNATC	1 cut(s)	1737
BsaJI	CCNNGG	3 cut(s)	375, 533, 1356
BsaWI	WCCGGW	1 cut(s)	143
Bsc4I	CCNNNNNNNGG	2 cut(s)	830, 1362
Bse1I	ACTGG	3 cut(s)	1986, 2031, 2166
Bse3DI	GCAATG	1 cut(s)	1863
Bse8I	GATNNNNATC	1 cut(s)	1737
BseBI	CCWGG	2 cut(s)	376, 665
BseCI	ATCGAT	1 cut(s)	1806
BseDI	CCNNGG	3 cut(s)	375, 533, 1356
BseGI	GGATG	6 cut(s)	518, 556, 1644, 1847, 2068, 2107
BseJI	GATNNNNATC	1 cut(s)	1737
BseLI	CCNNNNNNNGG	2 cut(s)	830, 1362
BseMI	GCAATG	1 cut(s)	1863
BseMII	CTCAG	5 cut(s)	219, 843, 1350, 1786, 1860
BseNI	ACTGG	3 cut(s)	1986, 2031, 2166
BseRI	GAGGAG	5 cut(s)	177, 324, 430, 662, 1628
BseXI	GCAGC	2 cut(s)	55, 116
Bsh1236I	CGCG	1 cut(s)	1503
BshFI	GGCC	5 cut(s)	38, 686, 980, 1929, 2264
BshVI	ATCGAT	1 cut(s)	1806
BsiHKAI	GWGCWC	2 cut(s)	98, 1599
BsiHKCI	CYCGRG	1 cut(s)	1610
BsiSI	CCGG	1 cut(s)	144
BslFI	GGGAC	2 cut(s)	19, 274
BslI	CCNNNNNNNGG	2 cut(s)	830, 1362
BsmAI	GTCTC	3 cut(s)	1245, 1581, 1967
BsmBI	CGTCTC	1 cut(s)	1245
BsmFI	GGGAC	2 cut(s)	19, 274
BsnI	GGCC	5 cut(s)	38, 686, 980, 1929, 2264
BsoBI	CYCGRG	1 cut(s)	1610
Bsp119I	TTCGAA	1 cut(s)	760
Bsp1286I	GDGCHC	3 cut(s)	98, 904, 1599
Bsp1407I	TGTACA	2 cut(s)	204, 1723
Bsp143I	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
Bsp19I	CCATGG	1 cut(s)	533
BspACI	CCGC	2 cut(s)	830, 2195
BspANI	GGCC	5 cut(s)	38, 686, 980, 1929, 2264
BspCNI	CTCAG	5 cut(s)	220, 844, 1349, 1785, 1861
BspDI	ATCGAT	1 cut(s)	1806
BspFNI	CGCG	1 cut(s)	1503
BspHI	TCATGA	1 cut(s)	694
BspLI	GGNNCC	3 cut(s)	7, 186, 981
BspMAI	CTGCAG	2 cut(s)	45, 2125
BspMI	ACCTGC	1 cut(s)	81
BspPI	GGATC	4 cut(s)	1129, 1239, 1524, 1811
BspQI	GCTCTTC	1 cut(s)	1182
BspT104I	TTCGAA	1 cut(s)	760
BsrDI	GCAATG	1 cut(s)	1863
BsrGI	TGTACA	2 cut(s)	204, 1723
BsrI	ACTGG	3 cut(s)	1986, 2031, 2166
BssECI	CCNNGG	3 cut(s)	375, 533, 1356
BssMI	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
BssT1I	CCWWGG	2 cut(s)	533, 1356
Bst2UI	CCWGG	2 cut(s)	376, 665
Bst4CI	ACNGT	3 cut(s)	433, 820, 1728
Bst6I	CTCTTC	8 cut(s)	178, 240, 583, 639, 672, 1028, 1182, 1255
BstAUI	TGTACA	2 cut(s)	204, 1723
BstBI	TTCGAA	1 cut(s)	760
BstC8I	GCNNGC	5 cut(s)	78, 741, 1194, 1306, 1983
BstDEI	CTNAG	9 cut(s)	155, 228, 638, 852, 1059, 1336, 1713, 1772, 1869
BstDSI	CCRYGG	1 cut(s)	533
BstENI	CCTNNNNNAGG	1 cut(s)	1360
BstF5I	GGATG	6 cut(s)	518, 556, 1644, 1847, 2068, 2107
BstFNI	CGCG	1 cut(s)	1503
BstH2I	RGCGCY	1 cut(s)	83
BstHHI	GCGC	2 cut(s)	82, 1505
BstKTI	GATC	9 cut(s)	793, 991, 1124, 1247, 1335, 1519, 1806, 2163, 2176
BstMAI	GTCTC	3 cut(s)	1245, 1581, 1967
BstMBI	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
BstMWI	GCNNNNNNNGC	1 cut(s)	836
BstNI	CCWGG	2 cut(s)	376, 665
BstNSI	RCATGY	1 cut(s)	1950
BstPAI	GACNNNNGTC	1 cut(s)	1173
BstSCI	CCNGG	2 cut(s)	374, 663
BstSFI	CTRYAG	4 cut(s)	41, 744, 816, 2121
BstUI	CGCG	1 cut(s)	1503
BstV1I	GCAGC	2 cut(s)	55, 116
BstV2I	GAAGAC	5 cut(s)	36, 599, 711, 1173, 1869
BstX2I	RGATCY	2 cut(s)	988, 1516
BstYI	RGATCY	2 cut(s)	988, 1516
Bsu15I	ATCGAT	1 cut(s)	1806
BsuI	GTATCC	1 cut(s)	1870
BsuRI	GGCC	5 cut(s)	38, 686, 980, 1929, 2264
BsuTUI	ATCGAT	1 cut(s)	1806
BtgI	CCRYGG	1 cut(s)	533
BtsCI	GGATG	6 cut(s)	518, 556, 1644, 1847, 2068, 2107
BtsIMutI	CAGTG	3 cut(s)	306, 438, 1993
BveI	ACCTGC	1 cut(s)	81
Cac8I	GCNNGC	5 cut(s)	78, 741, 1194, 1306, 1983
CaiI	CAGNNNCTG	1 cut(s)	851
CciI	TCATGA	1 cut(s)	694
CfoI	GCGC	2 cut(s)	82, 1505
Cfr13I	GGNCC	5 cut(s)	6, 37, 979, 1230, 1928
ClaI	ATCGAT	1 cut(s)	1806
CseI	GACGC	1 cut(s)	276
Csp6I	GTAC	9 cut(s)	141, 205, 423, 447, 785, 821, 863, 1724, 2039
CviQI	GTAC	9 cut(s)	141, 205, 423, 447, 785, 821, 863, 1724, 2039
DdeI	CTNAG	9 cut(s)	155, 228, 638, 852, 1059, 1336, 1713, 1772, 1869
DpnI	GATC	9 cut(s)	792, 990, 1123, 1246, 1334, 1518, 1805, 2162, 2175
DpnII	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
DrdI	GACNNNNNNGTC	1 cut(s)	1237
DseDI	GACNNNNNNGTC	1 cut(s)	1237
EaeI	YGGCCR	1 cut(s)	2262
Eam1104I	CTCTTC	8 cut(s)	178, 240, 583, 639, 672, 1028, 1182, 1255
EarI	CTCTTC	8 cut(s)	178, 240, 583, 639, 672, 1028, 1182, 1255
Ecl136II	GAGCTC	1 cut(s)	1597
Eco130I	CCWWGG	2 cut(s)	533, 1356
Eco24I	GRGCYC	2 cut(s)	904, 1599
Eco32I	GATATC	1 cut(s)	1719
Eco47I	GGWCC	2 cut(s)	6, 1230
Eco53kI	GAGCTC	1 cut(s)	1597
Eco57I	CTGAAG	4 cut(s)	741, 819, 828, 1655
Eco88I	CYCGRG	1 cut(s)	1610
EcoICRI	GAGCTC	1 cut(s)	1597
EcoNI	CCTNNNNNAGG	1 cut(s)	1360
EcoO109I	RGGNCCY	2 cut(s)	6, 37
EcoRI	GAATTC	1 cut(s)	654
EcoRII	CCWGG	2 cut(s)	374, 663
EcoRV	GATATC	1 cut(s)	1719
EcoT14I	CCWWGG	2 cut(s)	533, 1356
EcoT38I	GRGCYC	2 cut(s)	904, 1599
ErhI	CCWWGG	2 cut(s)	533, 1356
Esp3I	CGTCTC	1 cut(s)	1245
FalI	AAGNNNNNCTT	4 cut(s)	826, 858, 1638, 1670
FaqI	GGGAC	2 cut(s)	19, 274
FauI	CCCGC	2 cut(s)	823, 2188
FauNDI	CATATG	1 cut(s)	366
FbaI	TGATCA	1 cut(s)	790
FblI	GTMKAC	1 cut(s)	168
Fnu4HI	GCNGC	2 cut(s)	44, 105
FokI	GGATG	6 cut(s)	505, 543, 1651, 1854, 2055, 2114
FriOI	GRGCYC	2 cut(s)	904, 1599
Fsp4HI	GCNGC	2 cut(s)	44, 105
FspBI	CTAG	7 cut(s)	216, 420, 444, 804, 1173, 1407, 1460
GlaI	GCGC	2 cut(s)	81, 1504
GluI	GCNGC	2 cut(s)	44, 105
GsuI	CTGGAG	2 cut(s)	1583, 2149
HaeII	RGCGCY	1 cut(s)	83
HaeIII	GGCC	5 cut(s)	38, 686, 980, 1929, 2264
HapII	CCGG	1 cut(s)	144
HgaI	GACGC	1 cut(s)	276
HhaI	GCGC	2 cut(s)	82, 1505
Hin6I	GCGC	2 cut(s)	80, 1503
HinP1I	GCGC	2 cut(s)	80, 1503
HincII	GTYRAC	2 cut(s)	169, 1632
HindII	GTYRAC	2 cut(s)	169, 1632
HindIII	AAGCTT	5 cut(s)	1032, 1385, 1667, 1967, 2188
HpaI	GTTAAC	1 cut(s)	1632
HpaII	CCGG	1 cut(s)	144
HphI	GGTGA	3 cut(s)	486, 804, 1175
Hpy166II	GTNNAC	4 cut(s)	169, 207, 1632, 2066
Hpy8I	GTNNAC	4 cut(s)	169, 207, 1632, 2066
Hpy99I	CGWCG	1 cut(s)	170
HpyAV	CCTTC	8 cut(s)	339, 581, 676, 834, 946, 1138, 1416, 2163
HpyCH4III	ACNGT	3 cut(s)	433, 820, 1728
HpyCH4IV	ACGT	1 cut(s)	2272
HpyF10VI	GCNNNNNNNGC	1 cut(s)	836
HpyF3I	CTNAG	9 cut(s)	155, 228, 638, 852, 1059, 1336, 1713, 1772, 1869
HpySE526I	ACGT	1 cut(s)	2272
HspAI	GCGC	2 cut(s)	80, 1503
Ksp22I	TGATCA	1 cut(s)	790
KspAI	GTTAAC	1 cut(s)	1632
Kzo9I	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
LguI	GCTCTTC	1 cut(s)	1182
LmnI	GCTCC	4 cut(s)	101, 190, 1271, 1602
Lsp1109I	GCAGC	2 cut(s)	55, 116
LweI	GCATC	4 cut(s)	292, 1053, 1641, 1798
MaeI	CTAG	7 cut(s)	216, 420, 444, 804, 1173, 1407, 1460
MaeII	ACGT	1 cut(s)	2272
MaeIII	GTNAC	4 cut(s)	252, 433, 1661, 1993
MalI	GATC	9 cut(s)	792, 990, 1123, 1246, 1334, 1518, 1805, 2162, 2175
MboI	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
MflI	RGATCY	2 cut(s)	988, 1516
MhlI	GDGCHC	3 cut(s)	98, 904, 1599
MlsI	TGGCCA	1 cut(s)	2264
MluNI	TGGCCA	1 cut(s)	2264
MlyI	GAGTC	5 cut(s)	164, 701, 926, 1049, 2111
MmeI	TCCRAC	1 cut(s)	457
Mox20I	TGGCCA	1 cut(s)	2264
MscI	TGGCCA	1 cut(s)	2264
MslI	CAYNNNNRTG	2 cut(s)	621, 792
Msp20I	TGGCCA	1 cut(s)	2264
MspI	CCGG	1 cut(s)	144
MspR9I	CCNGG	2 cut(s)	376, 665
MvaI	CCWGG	2 cut(s)	376, 665
MvnI	CGCG	1 cut(s)	1503
MwoI	GCNNNNNNNGC	1 cut(s)	836
NcoI	CCATGG	1 cut(s)	533
NdeI	CATATG	1 cut(s)	366
NdeII	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
NlaIV	GGNNCC	3 cut(s)	7, 186, 981
NmuCI	GTSAC	3 cut(s)	252, 433, 1661
NspI	RCATGY	1 cut(s)	1950
NspV	TTCGAA	1 cut(s)	760
PaeR7I	CTCGAG	1 cut(s)	1610
PagI	TCATGA	1 cut(s)	694
PaqCI	CACCTGC	1 cut(s)	81
PciI	ACATGT	1 cut(s)	1946
PciSI	GCTCTTC	1 cut(s)	1182
PkrI	GCNGC	2 cut(s)	45, 106
PleI	GAGTC	5 cut(s)	164, 701, 926, 1048, 2111
PpsI	GAGTC	5 cut(s)	164, 701, 926, 1048, 2111
PpuMI	RGGWCCY	1 cut(s)	6
PscI	ACATGT	1 cut(s)	1946
PshAI	GACNNNNGTC	1 cut(s)	1173
Psp124BI	GAGCTC	1 cut(s)	1599
Psp1406I	AACGTT	1 cut(s)	2272
Psp5II	RGGWCCY	1 cut(s)	6
Psp6I	CCWGG	2 cut(s)	374, 663
PspGI	CCWGG	2 cut(s)	374, 663
PspN4I	GGNNCC	3 cut(s)	7, 186, 981
PspPI	GGNCC	5 cut(s)	6, 37, 979, 1230, 1928
PspPPI	RGGWCCY	1 cut(s)	6
PspXI	VCTCGAGB	1 cut(s)	1610
PstI	CTGCAG	2 cut(s)	45, 2125
PstNI	CAGNNNCTG	1 cut(s)	851
PsuI	RGATCY	2 cut(s)	988, 1516
RsaI	GTAC	9 cut(s)	142, 206, 424, 448, 786, 822, 864, 1725, 2040
RsaNI	GTAC	9 cut(s)	141, 205, 423, 447, 785, 821, 863, 1724, 2039
RseI	CAYNNNNRTG	2 cut(s)	621, 792
SacI	GAGCTC	1 cut(s)	1599
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	1182
SatI	GCNGC	2 cut(s)	44, 105
Sau3AI	GATC	9 cut(s)	790, 988, 1121, 1244, 1332, 1516, 1803, 2160, 2173
Sau96I	GGNCC	5 cut(s)	6, 37, 979, 1230, 1928
ScaI	AGTACT	1 cut(s)	424
SchI	GAGTC	5 cut(s)	164, 701, 926, 1049, 2111
ScrFI	CCNGG	2 cut(s)	376, 665
SduI	GDGCHC	3 cut(s)	98, 904, 1599
SfaNI	GCATC	4 cut(s)	292, 1053, 1641, 1798
SfcI	CTRYAG	4 cut(s)	41, 744, 816, 2121
Sfr274I	CTCGAG	1 cut(s)	1610
SfuI	TTCGAA	1 cut(s)	760
SinI	GGWCC	2 cut(s)	6, 1230
SlaI	CTCGAG	1 cut(s)	1610
SmiMI	CAYNNNNRTG	2 cut(s)	621, 792
SmlI	CTYRAG	6 cut(s)	134, 582, 1610, 1786, 1915, 1970
SmoI	CTYRAG	6 cut(s)	134, 582, 1610, 1786, 1915, 1970
SpeI	ACTAGT	1 cut(s)	215
SsiI	CCGC	2 cut(s)	830, 2195
SspI	AATATT	1 cut(s)	1098
SspMI	CTAG	7 cut(s)	216, 420, 444, 804, 1173, 1407, 1460
SstI	GAGCTC	1 cut(s)	1599
StyD4I	CCNGG	2 cut(s)	374, 663
StyI	CCWWGG	2 cut(s)	533, 1356
TaaI	ACNGT	3 cut(s)	433, 820, 1728
TaiI	ACGT	1 cut(s)	2275
TaqI	TCGA	9 cut(s)	52, 168, 399, 760, 1090, 1243, 1611, 1806, 2159
TatI	WGTACW	5 cut(s)	204, 422, 784, 862, 1723
TscAI	CASTG	3 cut(s)	313, 438, 1993
TseFI	GTSAC	3 cut(s)	252, 433, 1661
TseI	GCWGC	2 cut(s)	43, 104
Tsp45I	GTSAC	3 cut(s)	252, 433, 1661
TspGWI	ACGGA	1 cut(s)	1195
TspRI	CASTG	3 cut(s)	313, 438, 1993
VpaK11BI	GGWCC	2 cut(s)	6, 1230
XagI	CCTNNNNNAGG	1 cut(s)	1360
XapI	RAATTY	8 cut(s)	161, 243, 481, 654, 728, 1016, 1053, 1201
XceI	RCATGY	1 cut(s)	1950
XhoI	CTCGAG	1 cut(s)	1610
XmiI	GTMKAC	1 cut(s)	168
XspI	CTAG	7 cut(s)	216, 420, 444, 804, 1173, 1407, 1460
ZrmI	AGTACT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.