Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003248

Physical Location & Seq

Genomic Coordinates Forward (+)

43749231 .. 43755105

Gene Structure 5875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00031170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGGGGCCTCAAACTCCAAAGTAGAGGAAGATAAGGCCCTGCAGCTATGTCGAGAAAGGAAAAAATTTGTTAAGCAGGCGCTTGATGGCAGGTGCTCACTTGCAGCAACGCACGATATGTATATTCACTCACTGAAGAGTACGGGAACAGCTCTTAGGAAATTTGTCGAGTCTGGAGCTCCTGTTGAATCCTCTTTGTACACTTCCACTAGTGCAACCCCTGAGCCTCTACTTCAAATTGAGAAGTCCCTCTCTCAATTCTCATTTTCTTCTCCATCTGCGTCACAAAACATCGATGCAACCGATAATTTCTCTCCCTCTCCTTCTCCTCCAAATTCTACTCTGTTTCATGCAAATCATATGAAAATCAGGGGTAGCTTTTCTGAAAAGGTTGAAGAAAAACCTCCTGTATCTATTACTGCAACAGTGACCTCCTCTAGTACCCCACAGAATACCACACCTCGTTCTGCTACAAACACTCAAACATCACCATTTGGAGATTCTTCACAACCACTGGAAACTCCACCATGGGATTACTTTGGTTTTTTTCATCCAATTGACCATCAGTTCTCTTCTCAAGAAGGAAAGGCCATGAACCAGGGGTTTGAAAATACTGATGACATAAGACGGCTTAGGGAAGAGGAGGGAATTCCTGACCTGGAAGATGAAGAAGAGAAGGCCTCTTTTCATGGAAGGGAAGAATCTCAGGATTCTGAAGATGAATTTGATGAACCAGCTACAGATACTCTGGTTCGAAGTTTTGAAAACCTTAATAGAGTACATGACCATGTGGAAGCTAGTGCTTCACATACAGTACCTTCTGCAGAAAGTGTAACTTCAGAAAATGAGTTTTTGAAAGGAGAGAAAAGTAAATCTCCTGATTTGTCGCCATTGAGAGACACGTCCTCCGTAGTTGCACCTGAAACTGACTCGAATACAACTACAGTGAAGGAAGATTGCGTGGAAAGTAAGATTGCCCCGAAAGATCTTGTTTCAAGCATGAAAGATATTGAATTTCTCTTCATAAAAGCTTATGAGTCTGGTAAAGAAATTCCTAAGATGCTTGAAACAAATAAATTGCATTTCCGTCCAATATTCCAAGCAAAAGAAAGTAGATCATTTTCATCTACATTCTTGAAGACTTGTTTCTCCTGTGGTGAAGAACCTAGTCAAGTTCAGGAAGAGCCTGCTCAAACTGCCGTGAAATACTTAACTTGGCATAGGACTACATCGTCTCGATCCGCTTCATCAAGGAATCTTTTGGGAGCAAACTCAAAAGATGATAGTGAGAATCGTACTGGTAACCTCTTTGATAACTTCTGCATGATCTCAGGCAGTCATGCCTCAACCTTGGATAGGTTATATGCGTGGGAGAGGAAGCTTTATGACGAGGTTAAGGCTAGTGAGATGGTCAGAAGGGATTACGACTTGAGGTGTAAGATGTTAAGGCTACTAGAATCAAAAGGAGAAAGTTCTCAAAAAGTTGATAAAACTCGCGCTGTCGTTAAGGATCTACATTCAAGAATCAGAGTTGCTATTCACAGGATTGATTCTATATCAAAGAGGATTGAAAATATACGAGACAGAGAGCTCCAGCCACAACTCGAGGAGTTGATTCATGGGTTAAGTCGGATGTGGGAAGTGATGCTCGAATGTCACAAGCTTCAGTTTCTAATTATCTCCATAGCCTACAACAATGGCAACACTAAGATATCTGTAGACTCAGAAACACATCGTCAGATTACTCTCTATCTTGAAGATGAACTCAGCCATCTATCCTCAAGTTTTGACAAGTGGATCAATGCTCAAAAGTCCTATTTGCATTCTATAAATGGATGGCTTTTGAAATGCGTCTCTATTGCTGAGAAGTCTTCCAAAAAGAAAAAGAGGCAACCAGAAAACCCCTTAAGATTCTGTGGCCCTCCAATATATGCCACATGTGGTGAATGGTTCGATAAGCTTGAGACCTTACCTGCCAGTGAAGTAACAGAGGCTATAAAGACTTTAGAAACTGAAATTGCCAGTTTTGTACCACGCCAAGAAAAGAAAGAGGGTAAAGATGCAAACGATTCAGGTTTAGCACCTGGTAAGGATGATATTGGTATTGATAATGCAGCTAATATGTTGAGAGATGAAGTTTCCCCTTCCTGGATCTCCAGTTTTGATAGTTTCCAGACAAGCTTGGCGGGCTTTTGTGGTACGTTGAACAAGTTTGCAGACTCTTCTGTTAAGATGTATGCAGAAGTTCAGGCGGCCATCCAACGTTCAAAGAGCAATTATGATCATATTAAATCTAAATCTGGAGTTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

770

Amino Acids

86.37

Weight (kDa)

5.59

Isoelectric Point (pI)

55.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 58	2.4e-23	Protein of unknown function (DUF630)
DUF632	PF04782	330 - 674	8.9e-114	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27090 AT2G27090
fragaria_vesca	FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700 FvH4_3g27700
malus_domestica	MD00G1106500.v1.1 MD11G1182800.v1.1 MD11G1182900.v1.1
prunus_persica	Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1 Prupe.6G155700_v2.0.a1
pyrus_communis	pycom11g15930 pycom11g15950 pycom5153684g00360
rosa_chinensis	RchiOBHm_Chr5g0049991
rosa_laevigata	RLG00000034675
rosa_multiflora	Rmu_sc0000333.1_g000025
rosa_roxburghii	Rroxscaffold_1G00031170
rosa_rugosa	Rorug05G0256300 Rorug05G0256400.1
rosa_samantha	Rh5AG329300 Rh5BG340200 Rh5CG366200 Rh5DG352800
rosa_wichuraiana	Rw5G031110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	81
AasI	GACNNNNNNGTC	1 cut(s)	1231
Acc36I	ACCTGC	2 cut(s)	81, 1981
AccI	GTMKAC	1 cut(s)	1719
AccII	CGCG	1 cut(s)	1497
AciI	CCGC	3 cut(s)	1242, 2186, 2252
AclI	AACGTT	1 cut(s)	2263
AclWI	GGATC	4 cut(s)	1233, 1518, 1805, 2159
AcoI	YGGCCR	1 cut(s)	2253
AcsI	RAATTY	7 cut(s)	65, 161, 334, 648, 722, 1013, 1050
AcuI	CTGAAG	4 cut(s)	155, 735, 822, 1649
AfaI	GTAC	8 cut(s)	142, 200, 442, 780, 816, 1297, 2031, 2200
AfiI	CCNNNNNNNGG	2 cut(s)	1356, 2148
AflII	CTTAAG	1 cut(s)	1906
AflIII	ACRYGT	2 cut(s)	900, 1937
AhlI	ACTAGT	1 cut(s)	209
AjiI	CACGTC	1 cut(s)	903
AjnI	CCWGG	4 cut(s)	597, 657, 2083, 2147
Alw21I	GWGCWC	3 cut(s)	98, 181, 1593
Alw26I	GTCTC	5 cut(s)	891, 1239, 1575, 1858, 1958
AlwI	GGATC	4 cut(s)	1233, 1518, 1805, 2159
Ama87I	CYCGRG	1 cut(s)	1604
AoxI	GGCC	6 cut(s)	6, 36, 588, 678, 1918, 2253
ApeKI	GCWGC	3 cut(s)	43, 104, 2114
ApoI	RAATTY	7 cut(s)	65, 161, 334, 648, 722, 1013, 1050
AspLEI	GCGC	2 cut(s)	82, 1499
AspS9I	GGNCC	3 cut(s)	6, 37, 1919
AsuHPI	GGTGA	3 cut(s)	480, 1169, 1955
AsuII	TTCGAA	1 cut(s)	754
AvaI	CYCGRG	1 cut(s)	1604
BaeI	ACNNNNGTAYC	2 cut(s)	735, 768
BanII	GRGCYC	2 cut(s)	181, 1593
BbsI	GAAGAC	2 cut(s)	1145, 1863
Bbv12I	GWGCWC	3 cut(s)	98, 181, 1593
BbvI	GCAGC	3 cut(s)	55, 116, 2126
BccI	CCATC	7 cut(s)	80, 283, 570, 1402, 1779, 1830, 2264
BceAI	ACGGC	2 cut(s)	644, 1184
BcgI	CGANNNNNNTGC	2 cut(s)	32, 66
BciT130I	CCWGG	4 cut(s)	599, 659, 2085, 2149
BclI	TGATCA	1 cut(s)	2281
BcoDI	GTCTC	5 cut(s)	891, 1239, 1575, 1858, 1958
BcuI	ACTAGT	1 cut(s)	209
BfaI	CTAG	6 cut(s)	210, 438, 798, 1167, 1401, 1454
BfmI	CTRYAG	5 cut(s)	41, 738, 822, 942, 1716
BfoI	RGCGCY	1 cut(s)	83
BfrI	CTTAAG	1 cut(s)	1906
BfuAI	ACCTGC	2 cut(s)	81, 1981
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	4 cut(s)	44, 105, 2115, 2253
BlsI	GCNGC	4 cut(s)	45, 106, 2116, 2254
Bme1390I	CCNGG	4 cut(s)	599, 659, 2085, 2149
BmeT110I	CYCGRG	1 cut(s)	1604
BmgBI	CACGTC	1 cut(s)	903
BmgT120I	GGNCC	3 cut(s)	6, 37, 1919
BmiI	GGNNCC	1 cut(s)	7
BmrFI	CCNGG	4 cut(s)	599, 659, 2085, 2149
BmsI	GCATC	4 cut(s)	286, 1050, 1635, 2050
BpiI	GAAGAC	2 cut(s)	1145, 1863
BplI	GAGNNNNNCTC	2 cut(s)	665, 697
BpmI	CTGGAG	3 cut(s)	195, 1577, 2140
Bpu10I	CCTNAGC	2 cut(s)	222, 632
Bpu14I	TTCGAA	1 cut(s)	754
BpuEI	CTTGAG	4 cut(s)	561, 1450, 1765, 1982
Bsa29I	ATCGAT	1 cut(s)	294
BsaI	GGTCTC	1 cut(s)	1958
BsaJI	CCNNGG	3 cut(s)	527, 598, 1350
BsaXI	ACNNNNNCTCC	4 cut(s)	168, 198, 890, 920
Bsc4I	CCNNNNNNNGG	2 cut(s)	1356, 2148
Bse1I	ACTGG	5 cut(s)	519, 1303, 1977, 2022, 2157
BseBI	CCWGG	4 cut(s)	599, 659, 2085, 2149
BseCI	ATCGAT	1 cut(s)	294
BseDI	CCNNGG	3 cut(s)	527, 598, 1350
BseGI	GGATG	5 cut(s)	550, 1638, 1841, 2098, 2256
BseLI	CCNNNNNNNGG	2 cut(s)	1356, 2148
BseMII	CTCAG	6 cut(s)	213, 719, 1344, 1737, 1780, 1854
BseNI	ACTGG	5 cut(s)	519, 1303, 1977, 2022, 2157
BseRI	GAGGAG	4 cut(s)	318, 424, 656, 1622
BseXI	GCAGC	3 cut(s)	55, 116, 2126
Bsh1236I	CGCG	1 cut(s)	1497
BshFI	GGCC	6 cut(s)	8, 38, 590, 680, 1920, 2255
BshVI	ATCGAT	1 cut(s)	294
BsiHKAI	GWGCWC	3 cut(s)	98, 181, 1593
BsiHKCI	CYCGRG	1 cut(s)	1604
BslFI	GGGAC	1 cut(s)	232
BslI	CCNNNNNNNGG	2 cut(s)	1356, 2148
BsmAI	GTCTC	5 cut(s)	891, 1239, 1575, 1858, 1958
BsmBI	CGTCTC	2 cut(s)	1239, 1858
BsmFI	GGGAC	1 cut(s)	232
BsmI	GAATGC	1 cut(s)	1822
BsnI	GGCC	6 cut(s)	8, 38, 590, 680, 1920, 2255
Bso31I	GGTCTC	1 cut(s)	1958
BsoBI	CYCGRG	1 cut(s)	1604
Bsp119I	TTCGAA	1 cut(s)	754
Bsp1286I	GDGCHC	3 cut(s)	98, 181, 1593
Bsp1407I	TGTACA	1 cut(s)	198
Bsp143I	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
Bsp19I	CCATGG	1 cut(s)	527
BspACI	CCGC	3 cut(s)	1242, 2186, 2252
BspANI	GGCC	6 cut(s)	8, 38, 590, 680, 1920, 2255
BspCNI	CTCAG	6 cut(s)	214, 718, 1343, 1736, 1779, 1855
BspDI	ATCGAT	1 cut(s)	294
BspFNI	CGCG	1 cut(s)	1497
BspLI	GGNNCC	1 cut(s)	7
BspMAI	CTGCAG	2 cut(s)	45, 826
BspMI	ACCTGC	2 cut(s)	81, 1981
BspPI	GGATC	4 cut(s)	1233, 1518, 1805, 2159
BspQI	GCTCTTC	1 cut(s)	1176
BspT104I	TTCGAA	1 cut(s)	754
BspTI	CTTAAG	1 cut(s)	1906
BspTNI	GGTCTC	1 cut(s)	1958
BsrGI	TGTACA	1 cut(s)	198
BsrI	ACTGG	5 cut(s)	519, 1303, 1977, 2022, 2157
BssECI	CCNNGG	3 cut(s)	527, 598, 1350
BssMI	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
BssT1I	CCWWGG	2 cut(s)	527, 1350
Bst2UI	CCWGG	4 cut(s)	599, 659, 2085, 2149
Bst4CI	ACNGT	3 cut(s)	427, 814, 946
Bst6I	CTCTTC	7 cut(s)	131, 577, 633, 666, 1025, 1176, 2227
BstAFI	CTTAAG	1 cut(s)	1906
BstAUI	TGTACA	1 cut(s)	198
BstBI	TTCGAA	1 cut(s)	754
BstC8I	GCNNGC	3 cut(s)	78, 1188, 2188
BstDSI	CCRYGG	1 cut(s)	527
BstEII	GGTNACC	1 cut(s)	1301
BstENI	CCTNNNNNAGG	1 cut(s)	1354
BstF5I	GGATG	5 cut(s)	550, 1638, 1841, 2098, 2256
BstFNI	CGCG	1 cut(s)	1497
BstH2I	RGCGCY	1 cut(s)	83
BstHHI	GCGC	2 cut(s)	82, 1499
BstKTI	GATC	8 cut(s)	988, 1118, 1241, 1329, 1513, 1800, 2154, 2284
BstMAI	GTCTC	5 cut(s)	891, 1239, 1575, 1858, 1958
BstMBI	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
BstMWI	GCNNNNNNNGC	2 cut(s)	1196, 2187
BstNI	CCWGG	4 cut(s)	599, 659, 2085, 2149
BstNSI	RCATGY	1 cut(s)	1941
BstPI	GGTNACC	1 cut(s)	1301
BstSCI	CCNGG	4 cut(s)	597, 657, 2083, 2147
BstSFI	CTRYAG	5 cut(s)	41, 738, 822, 942, 1716
BstUI	CGCG	1 cut(s)	1497
BstV1I	GCAGC	3 cut(s)	55, 116, 2126
BstV2I	GAAGAC	2 cut(s)	1145, 1863
BstX2I	RGATCY	3 cut(s)	985, 1510, 2151
BstYI	RGATCY	3 cut(s)	985, 1510, 2151
Bsu15I	ATCGAT	1 cut(s)	294
BsuRI	GGCC	6 cut(s)	8, 38, 590, 680, 1920, 2255
BsuTUI	ATCGAT	1 cut(s)	294
BtgI	CCRYGG	1 cut(s)	527
BtrI	CACGTC	1 cut(s)	903
BtsCI	GGATG	5 cut(s)	550, 1638, 1841, 2098, 2256
BtsIMutI	CAGTG	5 cut(s)	131, 432, 512, 951, 1984
BveI	ACCTGC	2 cut(s)	81, 1981
Cac8I	GCNNGC	3 cut(s)	78, 1188, 2188
CfoI	GCGC	2 cut(s)	82, 1499
Cfr13I	GGNCC	3 cut(s)	6, 37, 1919
ClaI	ATCGAT	1 cut(s)	294
CseI	GACGC	2 cut(s)	270, 1840
CsiI	ACCWGGT	1 cut(s)	2083
Csp6I	GTAC	8 cut(s)	141, 199, 441, 779, 815, 1296, 2030, 2199
CviQI	GTAC	8 cut(s)	141, 199, 441, 779, 815, 1296, 2030, 2199
DpnI	GATC	8 cut(s)	987, 1117, 1240, 1328, 1512, 1799, 2153, 2283
DpnII	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
DrdI	GACNNNNNNGTC	1 cut(s)	1231
DseDI	GACNNNNNNGTC	1 cut(s)	1231
EaeI	YGGCCR	1 cut(s)	2253
Eam1104I	CTCTTC	7 cut(s)	131, 577, 633, 666, 1025, 1176, 2227
EarI	CTCTTC	7 cut(s)	131, 577, 633, 666, 1025, 1176, 2227
Ecl136II	GAGCTC	2 cut(s)	179, 1591
Eco130I	CCWWGG	2 cut(s)	527, 1350
Eco147I	AGGCCT	1 cut(s)	680
Eco24I	GRGCYC	2 cut(s)	181, 1593
Eco31I	GGTCTC	1 cut(s)	1958
Eco32I	GATATC	1 cut(s)	1713
Eco53kI	GAGCTC	2 cut(s)	179, 1591
Eco57I	CTGAAG	4 cut(s)	155, 735, 822, 1649
Eco88I	CYCGRG	1 cut(s)	1604
Eco91I	GGTNACC	1 cut(s)	1301
EcoICRI	GAGCTC	2 cut(s)	179, 1591
EcoNI	CCTNNNNNAGG	1 cut(s)	1354
EcoO109I	RGGNCCY	2 cut(s)	6, 37
EcoO65I	GGTNACC	1 cut(s)	1301
EcoRI	GAATTC	1 cut(s)	648
EcoRII	CCWGG	4 cut(s)	597, 657, 2083, 2147
EcoRV	GATATC	1 cut(s)	1713
EcoT14I	CCWWGG	2 cut(s)	527, 1350
EcoT38I	GRGCYC	2 cut(s)	181, 1593
ErhI	CCWWGG	2 cut(s)	527, 1350
Esp3I	CGTCTC	2 cut(s)	1239, 1858
FalI	AAGNNNNNCTT	2 cut(s)	820, 852
FaqI	GGGAC	1 cut(s)	232
FauI	CCCGC	1 cut(s)	2179
FauNDI	CATATG	1 cut(s)	360
FbaI	TGATCA	1 cut(s)	2281
FblI	GTMKAC	1 cut(s)	1719
Fnu4HI	GCNGC	4 cut(s)	44, 105, 2115, 2253
FokI	GGATG	5 cut(s)	537, 1645, 1848, 2105, 2243
FriOI	GRGCYC	2 cut(s)	181, 1593
Fsp4HI	GCNGC	4 cut(s)	44, 105, 2115, 2253
FspBI	CTAG	6 cut(s)	210, 438, 798, 1167, 1401, 1454
GlaI	GCGC	2 cut(s)	81, 1498
GluI	GCNGC	4 cut(s)	44, 105, 2115, 2253
GsuI	CTGGAG	3 cut(s)	195, 1577, 2140
HaeII	RGCGCY	1 cut(s)	83
HaeIII	GGCC	6 cut(s)	8, 38, 590, 680, 1920, 2255
HgaI	GACGC	2 cut(s)	270, 1840
HhaI	GCGC	2 cut(s)	82, 1499
Hin6I	GCGC	2 cut(s)	80, 1497
HinP1I	GCGC	2 cut(s)	80, 1497
HindIII	AAGCTT	5 cut(s)	1029, 1379, 1661, 1958, 2179
HphI	GGTGA	3 cut(s)	480, 1169, 1955
Hpy166II	GTNNAC	2 cut(s)	201, 1720
Hpy188I	TCNGA	8 cut(s)	385, 715, 841, 1415, 1529, 1632, 1726, 1740
Hpy8I	GTNNAC	2 cut(s)	201, 1720
HpyAV	CCTTC	8 cut(s)	333, 575, 670, 687, 828, 943, 1410, 2154
HpyCH4III	ACNGT	3 cut(s)	427, 814, 946
HpyCH4IV	ACGT	3 cut(s)	902, 2201, 2263
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1196, 2187
HpySE526I	ACGT	3 cut(s)	902, 2201, 2263
HspAI	GCGC	2 cut(s)	80, 1497
Ksp22I	TGATCA	1 cut(s)	2281
Kzo9I	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
LguI	GCTCTTC	1 cut(s)	1176
LmnI	GCTCC	4 cut(s)	176, 184, 1265, 1596
Lsp1109I	GCAGC	3 cut(s)	55, 116, 2126
LweI	GCATC	4 cut(s)	286, 1050, 1635, 2050
MabI	ACCWGGT	1 cut(s)	2083
MaeI	CTAG	6 cut(s)	210, 438, 798, 1167, 1401, 1454
MaeII	ACGT	3 cut(s)	902, 2201, 2263
MaeIII	GTNAC	6 cut(s)	282, 427, 832, 1301, 1655, 1984
MalI	GATC	8 cut(s)	987, 1117, 1240, 1328, 1512, 1799, 2153, 2283
MboI	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	3 cut(s)	985, 1510, 2151
MhlI	GDGCHC	3 cut(s)	98, 181, 1593
MlyI	GAGTC	5 cut(s)	179, 923, 1046, 1715, 2213
MmeI	TCCRAC	2 cut(s)	1610, 2284
MslI	CAYNNNNRTG	1 cut(s)	786
MspCI	CTTAAG	1 cut(s)	1906
MspR9I	CCNGG	4 cut(s)	599, 659, 2085, 2149
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	1822
MvaI	CCWGG	4 cut(s)	599, 659, 2085, 2149
MvnI	CGCG	1 cut(s)	1497
MwoI	GCNNNNNNNGC	2 cut(s)	1196, 2187
NcoI	CCATGG	1 cut(s)	527
NdeI	CATATG	1 cut(s)	360
NdeII	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
NlaIV	GGNNCC	1 cut(s)	7
NmuCI	GTSAC	3 cut(s)	282, 427, 1655
NspI	RCATGY	1 cut(s)	1941
NspV	TTCGAA	1 cut(s)	754
PaeR7I	CTCGAG	1 cut(s)	1604
PaqCI	CACCTGC	1 cut(s)	81
PceI	AGGCCT	1 cut(s)	680
PciI	ACATGT	1 cut(s)	1937
PciSI	GCTCTTC	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	1 cut(s)	300
PctI	GAATGC	1 cut(s)	1822
PfoI	TCCNGGA	1 cut(s)	2147
PkrI	GCNGC	4 cut(s)	45, 106, 2116, 2254
PleI	GAGTC	5 cut(s)	178, 923, 1045, 1715, 2213
PpsI	GAGTC	5 cut(s)	178, 923, 1045, 1715, 2213
PscI	ACATGT	1 cut(s)	1937
Psp124BI	GAGCTC	2 cut(s)	181, 1593
Psp1406I	AACGTT	1 cut(s)	2263
Psp6I	CCWGG	4 cut(s)	597, 657, 2083, 2147
PspEI	GGTNACC	1 cut(s)	1301
PspGI	CCWGG	4 cut(s)	597, 657, 2083, 2147
PspN4I	GGNNCC	1 cut(s)	7
PspPI	GGNCC	3 cut(s)	6, 37, 1919
PspXI	VCTCGAGB	1 cut(s)	1604
PstI	CTGCAG	2 cut(s)	45, 826
PsuI	RGATCY	3 cut(s)	985, 1510, 2151
RsaI	GTAC	8 cut(s)	142, 200, 442, 780, 816, 1297, 2031, 2200
RsaNI	GTAC	8 cut(s)	141, 199, 441, 779, 815, 1296, 2030, 2199
RseI	CAYNNNNRTG	1 cut(s)	786
SacI	GAGCTC	2 cut(s)	181, 1593
SapI	GCTCTTC	1 cut(s)	1176
SatI	GCNGC	4 cut(s)	44, 105, 2115, 2253
Sau3AI	GATC	8 cut(s)	985, 1115, 1238, 1326, 1510, 1797, 2151, 2281
Sau96I	GGNCC	3 cut(s)	6, 37, 1919
SchI	GAGTC	5 cut(s)	179, 923, 1046, 1715, 2213
ScrFI	CCNGG	4 cut(s)	599, 659, 2085, 2149
SduI	GDGCHC	3 cut(s)	98, 181, 1593
SexAI	ACCWGGT	1 cut(s)	2083
SfaNI	GCATC	4 cut(s)	286, 1050, 1635, 2050
SfcI	CTRYAG	5 cut(s)	41, 738, 822, 942, 1716
Sfr274I	CTCGAG	1 cut(s)	1604
SfuI	TTCGAA	1 cut(s)	754
SlaI	CTCGAG	1 cut(s)	1604
SmiMI	CAYNNNNRTG	1 cut(s)	786
SmlI	CTYRAG	6 cut(s)	576, 1429, 1604, 1780, 1906, 1961
SmoI	CTYRAG	6 cut(s)	576, 1429, 1604, 1780, 1906, 1961
SpeI	ACTAGT	1 cut(s)	209
SseBI	AGGCCT	1 cut(s)	680
SsiI	CCGC	3 cut(s)	1242, 2186, 2252
SspI	AATATT	1 cut(s)	1095
SspMI	CTAG	6 cut(s)	210, 438, 798, 1167, 1401, 1454
SstI	GAGCTC	2 cut(s)	181, 1593
StuI	AGGCCT	1 cut(s)	680
StyD4I	CCNGG	4 cut(s)	597, 657, 2083, 2147
StyI	CCWWGG	2 cut(s)	527, 1350
TaaI	ACNGT	3 cut(s)	427, 814, 946
TaiI	ACGT	3 cut(s)	905, 2204, 2266
TaqI	TCGA	9 cut(s)	52, 168, 294, 754, 932, 1237, 1605, 1650, 1953
TatI	WGTACW	2 cut(s)	198, 778
TauI	GCSGC	1 cut(s)	2255
TscAI	CASTG	5 cut(s)	138, 432, 519, 951, 1984
TseFI	GTSAC	3 cut(s)	282, 427, 1655
TseI	GCWGC	3 cut(s)	43, 104, 2114
Tsp45I	GTSAC	3 cut(s)	282, 427, 1655
TspGWI	ACGGA	2 cut(s)	898, 1076
TspRI	CASTG	5 cut(s)	138, 432, 519, 951, 1984
Vha464I	CTTAAG	1 cut(s)	1906
XagI	CCTNNNNNAGG	1 cut(s)	1354
XapI	RAATTY	7 cut(s)	65, 161, 334, 648, 722, 1013, 1050
XceI	RCATGY	1 cut(s)	1941
XhoI	CTCGAG	1 cut(s)	1604
XmiI	GTMKAC	1 cut(s)	1719
XspI	CTAG	6 cut(s)	210, 438, 798, 1167, 1401, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.