pycom5153684g00360

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012527_4311101_to_5153684
Physical Location & Seq
Forward (+)
562638 .. 567058
4421 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom5153684g00360.3

Sequence Viewer

Length: 1587 bp
ATGGGAGCCTCAAACTCTAAAATAGAAGAGGATAAGGCCCTGCAGCTATGTCGAGAACGGAAGAAGTTTGTTAAACTGGCACTTGACGGCAGGTGCTCGCTTGCAGCGGCTCATTTTATGTACATTCAATCGCTAAAGAATACTGGAACAGCTCTTAAGATATTTGTCGATCTTGGGGCTCCCGTTGAGTCTTCCTTGTACACTTCCACTAGTGCAACCCCAGAGCTTCTTGTTCAAACTGGCAAGAGTCTTTCTCAATTCTCTTTTTCCTCTCCATCTGTATCACAACGCATGGACGCAGCTGAAACGTTCTCACCATCTCCATCTCCTCCAAATTCTACCCGATTTCAAGCAAATCATATGAAATTCAGGGGCAGCTTTTCTAAAACTGTTGAAGAAAAGCCTCCTATTCCTCTTACTGCAACGCTAACCTCCTCTAGCACCCCACAGAATACCACACCTCGATCTGCCGGAAAACCTGAAACATCACCATTTGAAGCTTCGTCACTCCCACCACAAACACCACCGTTTGAAGCTTCATCACTCCCACCACAAACTCCACCATGGGATTACTTTGATTTTTTTCATCCAATTGACCATCAATTTTCTTTTCAAGAAGGGAAGGGAATGAACCAGGGGTTTGAAAATAACGATGATATGAGACAGCTTAGGGAAGAGGAGGGAATTCCTGATCTGGAAGATGAAGAAGAGAAGGCTTCTTTTCATGGAAGGGAAGAATCTCAGGATTCTGAAGATGAATTCGATGAGCCTGCTACAGATACCCTGGTTCGAAGTTTTGAAAATCTTAATAGAGTACAGGATCATGTTGAAGCTAGTGCTTCACCTACAATGCCTTCTGCAGGAAGTGTAACTTCTGAAACTGAGTTATTGAATGGGAAGAAAAGTAACACTCCAGATTTGTCACCGTTGAGATCCACATCCTCACCAGTTGCAGTTGAAACTGACTCAACTAAAACAACAGTTAAAGAAGATTTTGAAAGTAAGGTTGCCCCAAAAGATTTTTTTTCAAGCATGAAGGATATTGAAGTTCTCTTTATAAGAGCTTTCGAGGCTGGCAAAGAAATTCCTAGAATGCTTGAAGCAAATAAGTTTCATTTTCGTCCAATATTCCAGGAAAAAGAAACAGGTGGATCAATTTCATCTAAATTCTTGAAGGGTTGTTTCTCTTGCGGTGAAGACCCAAGTCAAGTTCAGGAAGATCCTCCTGAAACTGCTGTGAAGTATCTAACTTGGCATAGGACGACATCATCTCGATCCTCTTCATCGAGGAATCCTTTGGGAGCAAACTTAAAAGATGATACTGATGATCATACTGGTAACCTCTTTGACAACTTCTGCATGAATTCAGGCAGTCATGCCTCAACCTTGGATAGGTTATATGCTTGGGAGAGGAAGCTTTATGATGAAGTCAAGGCCAGTGAGATGGTTAGAAGGGATTATGACTTGAAGTGTAAGATTCTAAGGGAACTAGAATCAAAAGGAGAAAGTTCTCAAAAAATTGATAAAACTCGTGCTGCTGTCAAGGATCGACATTCTAAGAATCAGAGTGGCTATTCACAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

529

Amino Acids

58.81

Weight (kDa)

5.24

Isoelectric Point (pI)

52.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1058
AarI CACCTGC 1 cut(s) 81
Acc36I ACCTGC 1 cut(s) 81
AciI CCGC 2 cut(s) 107, 1191
AclI AACGTT 1 cut(s) 308
AclWI GGATC 6 cut(s) 828, 927, 1159, 1214, 1269, 1554
AcsI RAATTY 7 cut(s) 334, 365, 684, 758, 1083, 1166, 1363
AcuI CTGAAG 1 cut(s) 771
AfaI GTAC 3 cut(s) 122, 200, 816
AfiI CCNNNNNNNGG 2 cut(s) 860, 1392
AflII CTTAAG 1 cut(s) 155
AhlI ACTAGT 1 cut(s) 209
AjnI CCWGG 3 cut(s) 633, 783, 1131
Alw21I GWGCWC 1 cut(s) 98
Alw26I GTCTC 1 cut(s) 655
AlwI GGATC 6 cut(s) 828, 927, 1159, 1214, 1269, 1554
AoxI GGCC 2 cut(s) 36, 1434
ApeKI GCWGC 5 cut(s) 43, 104, 299, 375, 1535
ApoI RAATTY 7 cut(s) 334, 365, 684, 758, 1083, 1166, 1363
AspS9I GGNCC 1 cut(s) 37
AsuHPI GGTGA 6 cut(s) 306, 480, 834, 915, 936, 1205
AsuII TTCGAA 1 cut(s) 790
BaeI ACNNNNGTAYC 2 cut(s) 771, 804
BanII GRGCYC 1 cut(s) 181
BauI CACGAG 1 cut(s) 1530
BbsI GAAGAC 2 cut(s) 183, 1203
Bbv12I GWGCWC 1 cut(s) 98
BbvI GCAGC 5 cut(s) 55, 116, 311, 387, 1522
BccI CCATC 5 cut(s) 283, 325, 331, 606, 1438
BceAI ACGGC 1 cut(s) 103
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 752, 786
BciT130I CCWGG 3 cut(s) 635, 785, 1133
BclI TGATCA 1 cut(s) 1327
BcoDI GTCTC 1 cut(s) 655
BcuI ACTAGT 1 cut(s) 209
BfaI CTAG 5 cut(s) 210, 438, 834, 1089, 1490
BfmI CTRYAG 3 cut(s) 41, 774, 858
BfrI CTTAAG 1 cut(s) 155
BfuAI ACCTGC 1 cut(s) 81
BisI GCNGC 6 cut(s) 44, 105, 108, 300, 376, 1536
BlsI GCNGC 6 cut(s) 45, 106, 109, 301, 377, 1537
Bme1390I CCNGG 3 cut(s) 635, 785, 1133
BmgT120I GGNCC 1 cut(s) 37
BmiI GGNNCC 2 cut(s) 7, 180
BmrFI CCNGG 3 cut(s) 635, 785, 1133
BoxI GACNNNNGTC 1 cut(s) 1203
BpiI GAAGAC 2 cut(s) 183, 1203
BplI GAGNNNNNCTC 2 cut(s) 238, 270
BpmI CTGGAG 1 cut(s) 897
Bpu10I CCTNAGC 1 cut(s) 668
Bpu14I TTCGAA 1 cut(s) 790
BsaBI GATNNNNATC 1 cut(s) 937
BsaJI CCNNGG 4 cut(s) 563, 634, 783, 1386
Bsc4I CCNNNNNNNGG 2 cut(s) 860, 1392
Bse1I ACTGG 6 cut(s) 81, 148, 244, 947, 1339, 1437
Bse8I GATNNNNATC 1 cut(s) 937
BseBI CCWGG 3 cut(s) 635, 785, 1133
BseDI CCNNGG 4 cut(s) 563, 634, 783, 1386
BseGI GGATG 2 cut(s) 586, 938
BseJI GATNNNNATC 1 cut(s) 937
BseLI CCNNNNNNNGG 2 cut(s) 860, 1392
BseMII CTCAG 2 cut(s) 755, 873
BseNI ACTGG 6 cut(s) 81, 148, 244, 947, 1339, 1437
BseRI GAGGAG 3 cut(s) 318, 424, 692
BseXI GCAGC 5 cut(s) 55, 116, 311, 387, 1522
BshFI GGCC 2 cut(s) 38, 1436
BsiHKAI GWGCWC 1 cut(s) 98
BsiSI CCGG 1 cut(s) 471
BslI CCNNNNNNNGG 2 cut(s) 860, 1392
BsmAI GTCTC 1 cut(s) 655
BsmI GAATGC 1 cut(s) 1098
BsnI GGCC 2 cut(s) 38, 1436
Bsp119I TTCGAA 1 cut(s) 790
Bsp1286I GDGCHC 2 cut(s) 98, 181
Bsp1407I TGTACA 2 cut(s) 120, 198
Bsp19I CCATGG 1 cut(s) 563
BspACI CCGC 2 cut(s) 107, 1191
BspANI GGCC 2 cut(s) 38, 1436
BspCNI CTCAG 2 cut(s) 754, 874
BspLI GGNNCC 2 cut(s) 7, 180
BspMAI CTGCAG 2 cut(s) 45, 862
BspMI ACCTGC 1 cut(s) 81
BspPI GGATC 6 cut(s) 828, 927, 1159, 1214, 1269, 1554
BspT104I TTCGAA 1 cut(s) 790
BspTI CTTAAG 1 cut(s) 155
BsrGI TGTACA 2 cut(s) 120, 198
BsrI ACTGG 6 cut(s) 81, 148, 244, 947, 1339, 1437
BssECI CCNNGG 4 cut(s) 563, 634, 783, 1386
BssSI CACGAG 1 cut(s) 1530
BssT1I CCWWGG 2 cut(s) 563, 1386
Bst2BI CACGAG 1 cut(s) 1530
Bst2UI CCWGG 3 cut(s) 635, 785, 1133
Bst4CI ACNGT 4 cut(s) 391, 528, 927, 982
Bst6I CTCTTC 4 cut(s) 21, 669, 702, 1285
BstAFI CTTAAG 1 cut(s) 155
BstAUI TGTACA 2 cut(s) 120, 198
BstBI TTCGAA 1 cut(s) 790
BstC8I GCNNGC 4 cut(s) 98, 102, 771, 1075
BstDEI CTNAG 5 cut(s) 668, 741, 882, 1481, 1557
BstDSI CCRYGG 1 cut(s) 563
BstEII GGTNACC 1 cut(s) 1337
BstENI CCTNNNNNAGG 2 cut(s) 858, 1390
BstF5I GGATG 2 cut(s) 586, 938
BstMAI GTCTC 1 cut(s) 655
BstMWI GCNNNNNNNGC 1 cut(s) 1070
BstNI CCWGG 3 cut(s) 635, 785, 1133
BstPAI GACNNNNGTC 1 cut(s) 1203
BstPI GGTNACC 1 cut(s) 1337
BstSCI CCNGG 3 cut(s) 633, 783, 1131
BstSFI CTRYAG 3 cut(s) 41, 774, 858
BstV1I GCAGC 5 cut(s) 55, 116, 311, 387, 1522
BstV2I GAAGAC 2 cut(s) 183, 1203
BstX2I RGATCY 2 cut(s) 932, 1219
BstXI CCANNNNNNTGG 1 cut(s) 1444
BstYI RGATCY 2 cut(s) 932, 1219
BsuRI GGCC 2 cut(s) 38, 1436
BtgI CCRYGG 1 cut(s) 563
BtsCI GGATG 2 cut(s) 586, 938
BtsIMutI CAGTG 1 cut(s) 1444
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 4 cut(s) 98, 102, 771, 1075
Cfr13I GGNCC 1 cut(s) 37
CseI GACGC 1 cut(s) 305
Csp6I GTAC 3 cut(s) 121, 199, 815
CviAII CATG 7 cut(s) 292, 564, 725, 824, 1033, 1360, 1376
CviQI GTAC 3 cut(s) 121, 199, 815
DdeI CTNAG 5 cut(s) 668, 741, 882, 1481, 1557
Eam1104I CTCTTC 4 cut(s) 21, 669, 702, 1285
EarI CTCTTC 4 cut(s) 21, 669, 702, 1285
Eco130I CCWWGG 2 cut(s) 563, 1386
Eco24I GRGCYC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 771
Eco91I GGTNACC 1 cut(s) 1337
EcoNI CCTNNNNNAGG 2 cut(s) 858, 1390
EcoO109I RGGNCCY 1 cut(s) 37
EcoO65I GGTNACC 1 cut(s) 1337
EcoRI GAATTC 3 cut(s) 684, 758, 1363
EcoRII CCWGG 3 cut(s) 633, 783, 1131
EcoT14I CCWWGG 2 cut(s) 563, 1386
EcoT38I GRGCYC 1 cut(s) 181
ErhI CCWWGG 2 cut(s) 563, 1386
FaeI CATG 7 cut(s) 295, 567, 728, 827, 1036, 1363, 1379
FalI AAGNNNNNCTT 2 cut(s) 856, 888
FatI CATG 7 cut(s) 291, 563, 724, 823, 1032, 1359, 1375
FauNDI CATATG 1 cut(s) 360
FbaI TGATCA 1 cut(s) 1327
Fnu4HI GCNGC 6 cut(s) 44, 105, 108, 300, 376, 1536
FokI GGATG 2 cut(s) 573, 925
FriOI GRGCYC 1 cut(s) 181
Fsp4HI GCNGC 6 cut(s) 44, 105, 108, 300, 376, 1536
FspBI CTAG 5 cut(s) 210, 438, 834, 1089, 1490
GluI GCNGC 6 cut(s) 44, 105, 108, 300, 376, 1536
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 2 cut(s) 38, 1436
HapII CCGG 1 cut(s) 471
HgaI GACGC 1 cut(s) 305
Hin1II CATG 7 cut(s) 295, 567, 728, 827, 1036, 1363, 1379
HindIII AAGCTT 3 cut(s) 498, 534, 1415
HinfI GANTC 9 cut(s) 188, 247, 737, 746, 965, 1291, 1477, 1493, 1561
HpaII CCGG 1 cut(s) 471
HphI GGTGA 6 cut(s) 306, 480, 834, 915, 936, 1205
Hpy166II GTNNAC 1 cut(s) 201
Hpy188I TCNGA 3 cut(s) 751, 877, 1566
Hpy8I GTNNAC 1 cut(s) 201
HpyAV CCTTC 8 cut(s) 611, 616, 706, 723, 864, 1030, 1168, 1446
HpyCH4III ACNGT 4 cut(s) 391, 528, 927, 982
HpyCH4IV ACGT 1 cut(s) 308
HpyCH4V TGCA 7 cut(s) 43, 104, 215, 422, 860, 953, 1359
HpyF10VI GCNNNNNNNGC 1 cut(s) 1070
HpyF3I CTNAG 5 cut(s) 668, 741, 882, 1481, 1557
HpySE526I ACGT 1 cut(s) 308
Hsp92II CATG 7 cut(s) 295, 567, 728, 827, 1036, 1363, 1379
Ksp22I TGATCA 1 cut(s) 1327
LmnI GCTCC 3 cut(s) 5, 184, 1301
Lsp1109I GCAGC 5 cut(s) 55, 116, 311, 387, 1522
MaeI CTAG 5 cut(s) 210, 438, 834, 1089, 1490
MaeII ACGT 1 cut(s) 308
MaeIII GTNAC 5 cut(s) 504, 868, 905, 921, 1337
MfeI CAATTG 1 cut(s) 591
MflI RGATCY 2 cut(s) 932, 1219
MhlI GDGCHC 2 cut(s) 98, 181
MlyI GAGTC 3 cut(s) 197, 256, 959
MseI TTAA 5 cut(s) 72, 156, 807, 984, 1310
MspA1I CMGCKG 2 cut(s) 107, 302
MspCI CTTAAG 1 cut(s) 155
MspI CCGG 1 cut(s) 471
MspR9I CCNGG 3 cut(s) 635, 785, 1133
MunI CAATTG 1 cut(s) 591
Mva1269I GAATGC 1 cut(s) 1098
MvaI CCWGG 3 cut(s) 635, 785, 1133
MwoI GCNNNNNNNGC 1 cut(s) 1070
NcoI CCATGG 1 cut(s) 563
NdeI CATATG 1 cut(s) 360
NlaIII CATG 7 cut(s) 295, 567, 728, 827, 1036, 1363, 1379
NlaIV GGNNCC 2 cut(s) 7, 180
NmuCI GTSAC 2 cut(s) 504, 921
NspV TTCGAA 1 cut(s) 790
PaqCI CACCTGC 1 cut(s) 81
PctI GAATGC 1 cut(s) 1098
PfeI GAWTC 6 cut(s) 737, 746, 1291, 1477, 1493, 1561
PfoI TCCNGGA 1 cut(s) 1131
PkrI GCNGC 6 cut(s) 45, 106, 109, 301, 377, 1537
PleI GAGTC 3 cut(s) 196, 255, 959
PpsI GAGTC 3 cut(s) 196, 255, 959
PshAI GACNNNNGTC 1 cut(s) 1203
PsiI TTATAA 1 cut(s) 1058
Psp1406I AACGTT 1 cut(s) 308
Psp6I CCWGG 3 cut(s) 633, 783, 1131
PspEI GGTNACC 1 cut(s) 1337
PspGI CCWGG 3 cut(s) 633, 783, 1131
PspN4I GGNNCC 2 cut(s) 7, 180
PspPI GGNCC 1 cut(s) 37
PstI CTGCAG 2 cut(s) 45, 862
PsuI RGATCY 2 cut(s) 932, 1219
PvuII CAGCTG 1 cut(s) 302
RsaI GTAC 3 cut(s) 122, 200, 816
RsaNI GTAC 3 cut(s) 121, 199, 815
SaqAI TTAA 5 cut(s) 72, 156, 807, 984, 1310
SatI GCNGC 6 cut(s) 44, 105, 108, 300, 376, 1536
Sau96I GGNCC 1 cut(s) 37
SchI GAGTC 3 cut(s) 197, 256, 959
ScrFI CCNGG 3 cut(s) 635, 785, 1133
SduI GDGCHC 2 cut(s) 98, 181
SfcI CTRYAG 3 cut(s) 41, 774, 858
SfuI TTCGAA 1 cut(s) 790
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
SpeI ACTAGT 1 cut(s) 209
SsiI CCGC 2 cut(s) 107, 1191
SspI AATATT 1 cut(s) 1128
SspMI CTAG 5 cut(s) 210, 438, 834, 1089, 1490
StyD4I CCNGG 3 cut(s) 633, 783, 1131
StyI CCWWGG 2 cut(s) 563, 1386
TaaI ACNGT 4 cut(s) 391, 528, 927, 982
TaiI ACGT 1 cut(s) 311
TaqI TCGA 9 cut(s) 52, 168, 463, 762, 790, 1068, 1273, 1286, 1549
TatI WGTACW 3 cut(s) 120, 198, 814
TauI GCSGC 1 cut(s) 110
TfiI GAWTC 6 cut(s) 737, 746, 1291, 1477, 1493, 1561
Tru1I TTAA 5 cut(s) 72, 156, 807, 984, 1310
Tru9I TTAA 5 cut(s) 72, 156, 807, 984, 1310
TscAI CASTG 1 cut(s) 1444
TseFI GTSAC 2 cut(s) 504, 921
TseI GCWGC 5 cut(s) 43, 104, 299, 375, 1535
Tsp45I GTSAC 2 cut(s) 504, 921
TspGWI ACGGA 1 cut(s) 73
TspRI CASTG 1 cut(s) 1444
Vha464I CTTAAG 1 cut(s) 155
XagI CCTNNNNNAGG 2 cut(s) 858, 1390
XapI RAATTY 7 cut(s) 334, 365, 684, 758, 1083, 1166, 1363
XspI CTAG 5 cut(s) 210, 438, 834, 1089, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.