Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010237

Physical Location & Seq

Genomic Coordinates Forward (+)

33698887 .. 33701916

Gene Structure 3030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g39730.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGGTTAGGGAATTCCCACGGTACAGTTCCTCCGTCCCGGAGCCCCGCTCTTGGGACCAAAACTACTCCAATGCCTTTCAAGCCACCGTAAAAGCTCAGACCGCCGGCGGCAACGAGTCCAAGATTGGTTTCAACAATGTCTACCCACCAGAGTTAATTAAATGTCGACCGGCTGCAGGGTCACATCCCTTGGCCTTGTATGTTGGTGAGAGCCCTTTGAAAACTCCCTTCACGCTCGTGTTGCTAGAGATTTTACTGGTCATCGTTGCCACTCGCATTGTTCGTTTTCTTCTCAAGCCTCTCAGACAACCTAGAATTGTGTCGGAAATCATTGGTGGTATATTCATCGGACCGTCGATATTAGGCCGGAGCAAGAAGTTTACCTCCGTCGTGTTCCCTGAACATTCCCAATTTATCATTCGGAATATCGGAATAATGGGGTTCATGTATTTCCTTTTTATCTCCGGAGTGAAAATGGATTTTGCCGTGGTAGCAAAAACAAAGAAGAAGCACATCGTCATAGCCCTGGTTGGAGTGTTCATCCCTTTGTTAATGACAGAAGGTGTTGGATTTATTTTACGCAAGTCTATGGTCGACAAAGAGCTAGCAAAAGTGTCAACAATAGGTGGAATTGCTTCGAGTTTGGCCTTGCCATTGTTCCCTGTCATCTACCCCATCCTGAAAGAGCTCAACCTCCTTAGCTCCGATATAGGACGGCTTGCGCTGTCCATAGCGGTGCTCAGCGACGGGTTTGGGATCACCGCTTTGATAGTCTTCGAGGCAGCTTTACAAGGGGAGGGGAGGCCCATAGCCATCTTGTGGTACACCATTTCTTTGGTGCTTATTCTGGCATTCACTCTTGGTGTGATAAGAAAAGCCATGCACAAAATTATTGATCACACCCCGGATGGTCAATATGTTGACCAAGCTTATGTGGTGGGGATTTTGTTGCTGGTTATGGTGATGGGCTTTTTCACGGACATGTTCGGTGTGGCCATTGCTAACGGCCCGTTTTGGTTGGGCCTGGTGATTCCAGATGGGCCCCCTCTCGGTTCGACACTGGTGGACAGGAGTGAGACGATGATAACAGAGATTTTGATGCCATTTTCATTTGCTGTTATAGGTCTTTCCACTGATGTTGAAGCTATGATTATGGCGGGTTGGCAGTGGATGGCACCATTGTTTGCTATGGGTATAACTTGTTATGCGTCTAAATTCATAGCTACATTTGCTACTTCTATGTTTTTCCAAGTGCCATTCAGAGATGGTGTTGTGCTTAGCCTTGTTATGTGCCTCAAAGGTCAGGTGGAGCTTGTGCTTTTCATCCACTGGATGGACAAAAGGATGGTTGGGATACCAGGATTCACGATGCTCGTGCTACTTATAACAATAGTGACTGCAATAGCCACACCTTTGATCAGCATCCTCTATGACCCAACAAGGCCATATATGGTTCACAAAAGAAGAACAATCCAGCACACCCCAACAACAGACGCCGAACTTCGAATAGTTCTCGTCATTTATGATGAAGATAGCACAGCAGGCCTCATCAATCTTCTGGAAGTCTCCAATCCAACAATAAGCTCCCCATTCTCGATCTTTGCCATTCGCCTCATCGAGCTTGTTGGCCGTGCTTCTCCTGTGTTTATAGACCATCAGAAGGAAGAAGACGAGGCTGACTTGAAATATGCAGTGTCTCAAACCATCCACAATGCCTTGAAACTGTATCAAGAAAGCAAAGGTGACTATGTCAAGCTCTTTAACTTCACAGCCATAGCACCAATCAGAACAATGTACCAAGATATTTGTGAGCTAGCACTTTTGAAAAGAGCCACACTTATGATCTTGCCATTTCACAAGGAATGTCTGGACACTCTTGGAGGTAAACTGACAGAAATGGTGAGAAGAGGGATTAGAAATGTCAACACAAATGTTCTAGCGCATTCGCCTTGCTCGGTTGCTGTTCTGGTTGATAAGGGTCACCTCAGACATCCACTCATGGCATTCCGGGGACACTCTGATCTGCACTTTGTGATGTTGTTTTTGGGAGGAGCAGACGCGAGGGAGGCTTTGTGTTTAGCTGATAGGATGGTTGGGAATCCTAAGGTGTTGTTAACCGTGATTCGGTTTCTTTCATACAATTTTGAAGGGGATATTGAGATGGAGAAGAAGATGGATGATGGGGTTGTGACATGGTTTTGGGTTAAGAATGAGAGGAATGATAGGGTTTCTTACAGAGAGGTGGTAGTGAAGAATGGTGCAGAGACAGTAGGAGCAATTCAAGCTTTGGATGATCATAATTGTGATGTTTGGATTGTGGGGAGGAAACAAGGGATCAATCCGGTTCTTCTTGAAGGGTTATCAAATTGGAGTGAGAATCAAGAATTGGGTATAATTGGGGACTTTCTTTCCTCTGATGATTTTGATGGCACTGGTTCTGTTTTAGTTGTACAGCAGCAAATTTTGAGAGGGCAAGAGGCAGGTAAAGGTGGAATAACAGGTGGCCTAAATATATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

840

Amino Acids

92.74

Weight (kDa)

6.8

Isoelectric Point (pI)

35.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	90 - 472	1.1e-37	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	533 - 660	9.7e-10	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	678 - 820	1.1e-07	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37060 AT5G58460
fragaria_vesca	FvH4_3g39730
malus_domestica	MD03G1056200.v1.1 MD11G1057100.v1.1 MD11G1057400.v1.1
prunus_persica	Prupe.6G048600_v2.0.a1
pyrus_communis	pycom11g04800 pycom11g04810
rosa_chinensis	RchiOBHm_Chr5g0071611
rosa_laevigata	RLG00000036229
rosa_multiflora	Rmu_sc0005745.1_g000024
rosa_roxburghii	Rroxscaffold_1G00009570
rosa_rugosa	Rorug05G0413600 Rorug05G0413600 Rorug05G0413600
rosa_samantha	Rh5AG469500 Rh5BG488900 Rh5CG512800 Rh5DG499500
rosa_wichuraiana	Rw5G043620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1385
Acc36I	ACCTGC	1 cut(s)	2471
AccB1I	GGYRCC	1 cut(s)	1174
AccB7I	CCANNNNNTGG	2 cut(s)	819, 1333
AccBSI	CCGCTC	1 cut(s)	48
AccI	GTMKAC	3 cut(s)	141, 166, 594
AccII	CGCG	1 cut(s)	2060
AccIII	TCCGGA	1 cut(s)	464
AciI	CCGC	6 cut(s)	46, 102, 108, 734, 762, 1157
AclWI	GGATC	2 cut(s)	764, 2342
AcoI	YGGCCR	2 cut(s)	993, 1627
AcsI	RAATTY	3 cut(s)	11, 1214, 2460
AcyI	GRCGYC	1 cut(s)	1494
AdeI	CACNNNGTG	1 cut(s)	2032
AfaI	GTAC	4 cut(s)	23, 824, 1796, 2451
AfiI	CCNNNNNNNGG	8 cut(s)	51, 52, 176, 819, 1049, 1333, 1660, 2124
AflIII	ACRYGT	1 cut(s)	981
AjnI	CCWGG	3 cut(s)	525, 1023, 1357
AjuI	GAANNNNNNNTTGG	6 cut(s)	113, 145, 402, 434, 2369, 2401
AleI	CACNNNNGTG	1 cut(s)	236
Alw21I	GWGCWC	2 cut(s)	690, 741
Alw26I	GTCTC	4 cut(s)	1070, 1570, 1701, 2258
AlwI	GGATC	2 cut(s)	764, 2342
Aor13HI	TCCGGA	1 cut(s)	464
ApaI	GGGCCC	1 cut(s)	1044
ApeKI	GCWGC	3 cut(s)	173, 782, 2455
ApoI	RAATTY	3 cut(s)	11, 1214, 2460
Asp700I	GAANNNNTTC	1 cut(s)	634
AspLEI	GCGC	2 cut(s)	724, 1942
AspS9I	GGNCC	7 cut(s)	55, 350, 804, 1007, 1021, 1040, 1041
AsuC2I	CCSGG	3 cut(s)	38, 905, 2009
AsuHPI	GGTGA	7 cut(s)	218, 751, 973, 1039, 1754, 1912, 1973
AsuII	TTCGAA	1 cut(s)	1504
AsuNHI	GCTAGC	2 cut(s)	604, 1813
AvaII	GGWCC	2 cut(s)	55, 350
AxyI	CCTNAGG	1 cut(s)	2103
BaeGI	GKGCMC	1 cut(s)	1044
BalI	TGGCCA	1 cut(s)	995
BanI	GGYRCC	1 cut(s)	1174
BanII	GRGCYC	4 cut(s)	45, 215, 690, 1044
BauI	CACGAG	2 cut(s)	236, 1373
BbsI	GAAGAC	2 cut(s)	766, 1674
Bbv12I	GWGCWC	2 cut(s)	690, 741
BbvI	GCAGC	3 cut(s)	160, 794, 2467
BceAI	ACGGC	4 cut(s)	470, 731, 1021, 1614
BcgI	CGANNNNNNTGC	2 cut(s)	1357, 1391
BciT130I	CCWGG	3 cut(s)	527, 1025, 1359
BciVI	GTATCC	1 cut(s)	1347
BclI	TGATCA	3 cut(s)	895, 1416, 2293
BcnI	CCSGG	3 cut(s)	38, 905, 2009
BcoDI	GTCTC	4 cut(s)	1070, 1570, 1701, 2258
BfaI	CTAG	5 cut(s)	245, 312, 605, 1814, 1937
BfmI	CTRYAG	1 cut(s)	174
BfuAI	ACCTGC	1 cut(s)	2471
BfuI	GTATCC	1 cut(s)	1347
BisI	GCNGC	4 cut(s)	109, 174, 783, 2456
BlpI	GCTNAGC	2 cut(s)	740, 1277
BlsI	GCNGC	4 cut(s)	110, 175, 784, 2457
Bme1390I	CCNGG	6 cut(s)	38, 527, 905, 1025, 1359, 2009
Bme18I	GGWCC	2 cut(s)	55, 350
BmgT120I	GGNCC	7 cut(s)	55, 350, 804, 1007, 1021, 1040, 1041
BmiI	GGNNCC	5 cut(s)	42, 56, 1042, 1043, 1176
BmrFI	CCNGG	6 cut(s)	38, 527, 905, 1025, 1359, 2009
BmsI	GCATC	3 cut(s)	1089, 1359, 1431
BmtI	GCTAGC	2 cut(s)	608, 1817
BpiI	GAAGAC	2 cut(s)	766, 1674
BplI	GAGNNNNNCTC	2 cut(s)	32, 64
Bpu10I	CCTNAGC	1 cut(s)	698
Bpu1102I	GCTNAGC	2 cut(s)	740, 1277
Bpu14I	TTCGAA	1 cut(s)	1504
BpuEI	CTTGAG	1 cut(s)	278
BpuMI	CCSGG	3 cut(s)	38, 905, 2009
BsaBI	GATNNNNATC	1 cut(s)	1421
BsaHI	GRCGYC	1 cut(s)	1494
BsaJI	CCNNGG	6 cut(s)	17, 189, 486, 525, 903, 2008
BsaWI	WCCGGW	2 cut(s)	464, 2341
BsaXI	ACNNNNNCTCC	4 cut(s)	14, 44, 2057, 2087
Bsc4I	CCNNNNNNNGG	8 cut(s)	51, 52, 176, 819, 1049, 1333, 1660, 2124
Bse118I	RCCGGY	2 cut(s)	104, 169
Bse1I	ACTGG	4 cut(s)	261, 1065, 1334, 2437
Bse21I	CCTNAGG	1 cut(s)	2103
Bse3DI	GCAATG	1 cut(s)	996
Bse8I	GATNNNNATC	1 cut(s)	1421
BseAI	TCCGGA	1 cut(s)	464
BseBI	CCWGG	3 cut(s)	527, 1025, 1359
BseDI	CCNNGG	6 cut(s)	17, 189, 486, 525, 903, 2008
BseJI	GATNNNNATC	1 cut(s)	1421
BseLI	CCNNNNNNNGG	8 cut(s)	51, 52, 176, 819, 1049, 1333, 1660, 2124
BseMI	GCAATG	1 cut(s)	996
BseMII	CTCAG	4 cut(s)	110, 316, 754, 1999
BseNI	ACTGG	4 cut(s)	261, 1065, 1334, 2437
BseRI	GAGGAG	1 cut(s)	2064
BseSI	GKGCMC	1 cut(s)	1044
BseXI	GCAGC	3 cut(s)	160, 794, 2467
BsgI	GTGCAG	2 cut(s)	2009, 2280
Bsh1236I	CGCG	1 cut(s)	2060
Bsh1285I	CGRYCG	1 cut(s)	170
BshNI	GGYRCC	1 cut(s)	1174
BsiEI	CGRYCG	1 cut(s)	170
BsiHKAI	GWGCWC	2 cut(s)	690, 741
BsiSI	CCGG	8 cut(s)	38, 105, 170, 367, 465, 905, 2008, 2342
BslFI	GGGAC	4 cut(s)	20, 68, 2025, 2414
BslI	CCNNNNNNNGG	8 cut(s)	51, 52, 176, 819, 1049, 1333, 1660, 2124
BsmAI	GTCTC	4 cut(s)	1070, 1570, 1701, 2258
BsmBI	CGTCTC	1 cut(s)	1070
BsmFI	GGGAC	4 cut(s)	20, 68, 2025, 2414
BsmI	GAATGC	3 cut(s)	851, 1942, 2003
Bsp119I	TTCGAA	1 cut(s)	1504
Bsp120I	GGGCCC	1 cut(s)	1040
Bsp1286I	GDGCHC	5 cut(s)	45, 215, 690, 741, 1044
Bsp13I	TCCGGA	1 cut(s)	464
Bsp1407I	TGTACA	1 cut(s)	2449
Bsp143I	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
Bsp1720I	GCTNAGC	2 cut(s)	740, 1277
BspACI	CCGC	6 cut(s)	46, 102, 108, 734, 762, 1157
BspCNI	CTCAG	4 cut(s)	109, 315, 753, 1998
BspEI	TCCGGA	1 cut(s)	464
BspFNI	CGCG	1 cut(s)	2060
BspLI	GGNNCC	5 cut(s)	42, 56, 1042, 1043, 1176
BspMAI	CTGCAG	1 cut(s)	178
BspMI	ACCTGC	1 cut(s)	2471
BspOI	GCTAGC	2 cut(s)	608, 1817
BspPI	GGATC	2 cut(s)	764, 2342
BspT104I	TTCGAA	1 cut(s)	1504
BspT107I	GGYRCC	1 cut(s)	1174
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	1 cut(s)	996
BsrFI	RCCGGY	2 cut(s)	104, 169
BsrGI	TGTACA	1 cut(s)	2449
BsrI	ACTGG	4 cut(s)	261, 1065, 1334, 2437
BssAI	RCCGGY	2 cut(s)	104, 169
BssECI	CCNNGG	6 cut(s)	17, 189, 486, 525, 903, 2008
BssMI	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
BssNI	GRCGYC	1 cut(s)	1494
BssSI	CACGAG	2 cut(s)	236, 1373
BssT1I	CCWWGG	1 cut(s)	189
Bst2BI	CACGAG	2 cut(s)	236, 1373
Bst2UI	CCWGG	3 cut(s)	527, 1025, 1359
Bst4CI	ACNGT	7 cut(s)	21, 26, 88, 354, 1725, 2119, 2269
Bst6I	CTCTTC	1 cut(s)	1900
BstACI	GRCGYC	1 cut(s)	1494
BstAUI	TGTACA	1 cut(s)	2449
BstBI	TTCGAA	1 cut(s)	1504
BstC8I	GCNNGC	5 cut(s)	106, 606, 720, 1543, 1815
BstDEI	CTNAG	7 cut(s)	96, 302, 698, 740, 1277, 1985, 2103
BstDSI	CCRYGG	2 cut(s)	17, 486
BstEII	GGTNACC	1 cut(s)	1979
BstFNI	CGCG	1 cut(s)	2060
BstHHI	GCGC	2 cut(s)	724, 1942
BstKTI	GATC	8 cut(s)	759, 898, 1419, 1599, 1845, 2023, 2296, 2337
BstMAI	GTCTC	4 cut(s)	1070, 1570, 1701, 2258
BstMBI	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
BstMCI	CGRYCG	1 cut(s)	170
BstMWI	GCNNNNNNNGC	8 cut(s)	80, 101, 241, 491, 1229, 1542, 2066, 2282
BstNI	CCWGG	3 cut(s)	527, 1025, 1359
BstNSI	RCATGY	1 cut(s)	985
BstPI	GGTNACC	1 cut(s)	1979
BstSCI	CCNGG	6 cut(s)	36, 525, 903, 1023, 1357, 2007
BstSFI	CTRYAG	1 cut(s)	174
BstSLI	GKGCMC	1 cut(s)	1044
BstUI	CGCG	1 cut(s)	2060
BstV1I	GCAGC	3 cut(s)	160, 794, 2467
BstV2I	GAAGAC	2 cut(s)	766, 1674
BstXI	CCANNNNNNTGG	1 cut(s)	835
Bsu36I	CCTNAGG	1 cut(s)	2103
BsuI	GTATCC	1 cut(s)	1347
BtgI	CCRYGG	2 cut(s)	17, 486
BtsI	GCAGTG	2 cut(s)	1172, 1698
BtsIMutI	CAGTG	6 cut(s)	1058, 1131, 1172, 1327, 1698, 2430
BveI	ACCTGC	1 cut(s)	2471
Cac8I	GCNNGC	5 cut(s)	106, 606, 720, 1543, 1815
CfoI	GCGC	2 cut(s)	724, 1942
Cfr10I	RCCGGY	2 cut(s)	104, 169
Cfr13I	GGNCC	7 cut(s)	55, 350, 804, 1007, 1021, 1040, 1041
CpoI	CGGWCCG	1 cut(s)	350
CseI	GACGC	3 cut(s)	1197, 1502, 2066
Csp6I	GTAC	4 cut(s)	22, 823, 1795, 2450
CspCI	CAANNNNNGTGG	4 cut(s)	259, 294, 1120, 1155
CspI	CGGWCCG	1 cut(s)	350
CviAII	CATG	5 cut(s)	445, 880, 982, 1999, 2193
CviQI	GTAC	4 cut(s)	22, 823, 1795, 2450
DdeI	CTNAG	7 cut(s)	96, 302, 698, 740, 1277, 1985, 2103
DpnI	GATC	8 cut(s)	758, 897, 1418, 1598, 1844, 2022, 2295, 2336
DpnII	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
DraIII	CACNNNGTG	1 cut(s)	2032
EaeI	YGGCCR	2 cut(s)	993, 1627
Eam1104I	CTCTTC	1 cut(s)	1900
EarI	CTCTTC	1 cut(s)	1900
Ecl136II	GAGCTC	1 cut(s)	688
Eco130I	CCWWGG	1 cut(s)	189
Eco147I	AGGCCT	1 cut(s)	1545
Eco24I	GRGCYC	4 cut(s)	45, 215, 690, 1044
Eco47I	GGWCC	2 cut(s)	55, 350
Eco53kI	GAGCTC	1 cut(s)	688
Eco81I	CCTNAGG	1 cut(s)	2103
Eco91I	GGTNACC	1 cut(s)	1979
EcoICRI	GAGCTC	1 cut(s)	688
EcoO109I	RGGNCCY	1 cut(s)	1041
EcoO65I	GGTNACC	1 cut(s)	1979
EcoRI	GAATTC	1 cut(s)	11
EcoRII	CCWGG	3 cut(s)	525, 1023, 1357
EcoT14I	CCWWGG	1 cut(s)	189
EcoT38I	GRGCYC	4 cut(s)	45, 215, 690, 1044
ErhI	CCWWGG	1 cut(s)	189
Esp3I	CGTCTC	1 cut(s)	1070
FaeI	CATG	5 cut(s)	448, 883, 985, 2002, 2196
FaqI	GGGAC	4 cut(s)	20, 68, 2025, 2414
FatI	CATG	5 cut(s)	444, 879, 981, 1998, 2192
FauI	CCCGC	2 cut(s)	53, 1150
FbaI	TGATCA	3 cut(s)	895, 1416, 2293
FblI	GTMKAC	3 cut(s)	141, 166, 594
Fnu4HI	GCNGC	4 cut(s)	109, 174, 783, 2456
FriOI	GRGCYC	4 cut(s)	45, 215, 690, 1044
Fsp4HI	GCNGC	4 cut(s)	109, 174, 783, 2456
FspBI	CTAG	5 cut(s)	245, 312, 605, 1814, 1937
GlaI	GCGC	2 cut(s)	723, 1941
GluI	GCNGC	4 cut(s)	109, 174, 783, 2456
HapII	CCGG	8 cut(s)	38, 105, 170, 367, 465, 905, 2008, 2342
HgaI	GACGC	3 cut(s)	1197, 1502, 2066
HhaI	GCGC	2 cut(s)	724, 1942
Hin1I	GRCGYC	1 cut(s)	1494
Hin1II	CATG	5 cut(s)	448, 883, 985, 2002, 2196
Hin6I	GCGC	2 cut(s)	722, 1940
HinP1I	GCGC	2 cut(s)	722, 1940
HincII	GTYRAC	6 cut(s)	167, 595, 618, 922, 1924, 2115
HindII	GTYRAC	6 cut(s)	167, 595, 618, 922, 1924, 2115
HindIII	AAGCTT	2 cut(s)	927, 2283
HinfI	GANTC	6 cut(s)	116, 1030, 1362, 2098, 2122, 2377
HpaI	GTTAAC	1 cut(s)	2115
HpaII	CCGG	8 cut(s)	38, 105, 170, 367, 465, 905, 2008, 2342
HphI	GGTGA	7 cut(s)	218, 751, 973, 1039, 1754, 1912, 1973
Hpy99I	CGWCG	3 cut(s)	358, 392, 749
HpyAV	CCTTC	5 cut(s)	238, 554, 1654, 2141, 2348
HpyCH4III	ACNGT	7 cut(s)	21, 26, 88, 354, 1725, 2119, 2269
HpyCH4V	TGCA	6 cut(s)	176, 883, 1400, 1691, 2026, 2261
HpyF10VI	GCNNNNNNNGC	8 cut(s)	80, 101, 241, 491, 1229, 1542, 2066, 2282
HpyF3I	CTNAG	7 cut(s)	96, 302, 698, 740, 1277, 1985, 2103
Hsp92I	GRCGYC	1 cut(s)	1494
Hsp92II	CATG	5 cut(s)	448, 883, 985, 2002, 2196
HspAI	GCGC	2 cut(s)	722, 1940
Kpn2I	TCCGGA	1 cut(s)	464
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	3 cut(s)	895, 1416, 2293
KspAI	GTTAAC	1 cut(s)	2115
Kzo9I	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
LmnI	GCTCC	7 cut(s)	40, 369, 707, 1309, 1589, 2051, 2273
Lsp1109I	GCAGC	3 cut(s)	160, 794, 2467
LweI	GCATC	3 cut(s)	1089, 1359, 1431
MaeI	CTAG	5 cut(s)	245, 312, 605, 1814, 1937
MaeIII	GTNAC	5 cut(s)	180, 1393, 1742, 1979, 2188
MalI	GATC	8 cut(s)	758, 897, 1418, 1598, 1844, 2022, 2295, 2336
MbiI	CCGCTC	1 cut(s)	48
MboI	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
MhlI	GDGCHC	5 cut(s)	45, 215, 690, 741, 1044
MlsI	TGGCCA	1 cut(s)	995
MluNI	TGGCCA	1 cut(s)	995
MlyI	GAGTC	1 cut(s)	125
MmeI	TCCRAC	4 cut(s)	303, 511, 547, 1598
Mox20I	TGGCCA	1 cut(s)	995
MreI	CGCCGGCG	1 cut(s)	104
MroI	TCCGGA	1 cut(s)	464
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	634
MscI	TGGCCA	1 cut(s)	995
MseI	TTAA	6 cut(s)	155, 159, 551, 1761, 2114, 2205
MslI	CAYNNNNRTG	5 cut(s)	236, 734, 980, 1838, 2301
Msp20I	TGGCCA	1 cut(s)	995
MspI	CCGG	8 cut(s)	38, 105, 170, 367, 465, 905, 2008, 2342
MspR9I	CCNGG	6 cut(s)	38, 527, 905, 1025, 1359, 2009
Mva1269I	GAATGC	3 cut(s)	851, 1942, 2003
MvaI	CCWGG	3 cut(s)	527, 1025, 1359
MvnI	CGCG	1 cut(s)	2060
MwoI	GCNNNNNNNGC	8 cut(s)	80, 101, 241, 491, 1229, 1542, 2066, 2282
NaeI	GCCGGC	1 cut(s)	106
NciI	CCSGG	3 cut(s)	38, 905, 2009
NdeII	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
NgoMIV	GCCGGC	1 cut(s)	104
NheI	GCTAGC	2 cut(s)	604, 1813
NlaIII	CATG	5 cut(s)	448, 883, 985, 2002, 2196
NlaIV	GGNNCC	5 cut(s)	42, 56, 1042, 1043, 1176
NmuCI	GTSAC	5 cut(s)	180, 1393, 1742, 1979, 2188
NspI	RCATGY	1 cut(s)	985
NspV	TTCGAA	1 cut(s)	1504
OliI	CACNNNNGTG	1 cut(s)	236
PacI	TTAATTAA	1 cut(s)	159
PceI	AGGCCT	1 cut(s)	1545
PciI	ACATGT	1 cut(s)	981
PcsI	WCGNNNNNNNCGW	1 cut(s)	280
PctI	GAATGC	3 cut(s)	851, 1942, 2003
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	634
PfeI	GAWTC	5 cut(s)	1030, 1362, 2098, 2122, 2377
PflFI	GACNNNGTC	1 cut(s)	1748
PflMI	CCANNNNNTGG	2 cut(s)	819, 1333
PfoI	TCCNGGA	1 cut(s)	36
PkrI	GCNGC	4 cut(s)	110, 175, 784, 2457
PleI	GAGTC	1 cut(s)	124
PpsI	GAGTC	1 cut(s)	124
PscI	ACATGT	1 cut(s)	981
PsiI	TTATAA	1 cut(s)	1385
Psp124BI	GAGCTC	1 cut(s)	690
Psp6I	CCWGG	3 cut(s)	525, 1023, 1357
PspEI	GGTNACC	1 cut(s)	1979
PspGI	CCWGG	3 cut(s)	525, 1023, 1357
PspN4I	GGNNCC	5 cut(s)	42, 56, 1042, 1043, 1176
PspOMI	GGGCCC	1 cut(s)	1040
PspPI	GGNCC	7 cut(s)	55, 350, 804, 1007, 1021, 1040, 1041
PstI	CTGCAG	1 cut(s)	178
PsyI	GACNNNGTC	1 cut(s)	1748
RsaI	GTAC	4 cut(s)	23, 824, 1796, 2451
RsaNI	GTAC	4 cut(s)	22, 823, 1795, 2450
RseI	CAYNNNNRTG	5 cut(s)	236, 734, 980, 1838, 2301
Rsr2I	CGGWCCG	1 cut(s)	350
RsrII	CGGWCCG	1 cut(s)	350
SacI	GAGCTC	1 cut(s)	690
SalI	GTCGAC	2 cut(s)	165, 593
SaqAI	TTAA	6 cut(s)	155, 159, 551, 1761, 2114, 2205
SatI	GCNGC	4 cut(s)	109, 174, 783, 2456
Sau3AI	GATC	8 cut(s)	756, 895, 1416, 1596, 1842, 2020, 2293, 2334
Sau96I	GGNCC	7 cut(s)	55, 350, 804, 1007, 1021, 1040, 1041
SchI	GAGTC	1 cut(s)	125
ScrFI	CCNGG	6 cut(s)	38, 527, 905, 1025, 1359, 2009
SduI	GDGCHC	5 cut(s)	45, 215, 690, 741, 1044
SfaNI	GCATC	3 cut(s)	1089, 1359, 1431
SfcI	CTRYAG	1 cut(s)	174
SfuI	TTCGAA	1 cut(s)	1504
SgrAI	CRCCGGYG	1 cut(s)	104
SinI	GGWCC	2 cut(s)	55, 350
SmiMI	CAYNNNNRTG	5 cut(s)	236, 734, 980, 1838, 2301
SmlI	CTYRAG	1 cut(s)	293
SmoI	CTYRAG	1 cut(s)	293
SseBI	AGGCCT	1 cut(s)	1545
SsiI	CCGC	6 cut(s)	46, 102, 108, 734, 762, 1157
SspMI	CTAG	5 cut(s)	245, 312, 605, 1814, 1937
SstI	GAGCTC	1 cut(s)	690
StuI	AGGCCT	1 cut(s)	1545
StyD4I	CCNGG	6 cut(s)	36, 525, 903, 1023, 1357, 2007
StyI	CCWWGG	1 cut(s)	189
TaaI	ACNGT	7 cut(s)	21, 26, 88, 354, 1725, 2119, 2269
TaqI	TCGA	9 cut(s)	166, 356, 594, 638, 777, 1055, 1504, 1595, 1617
TatI	WGTACW	1 cut(s)	2449
TauI	GCSGC	1 cut(s)	111
TfiI	GAWTC	5 cut(s)	1030, 1362, 2098, 2122, 2377
Tru1I	TTAA	6 cut(s)	155, 159, 551, 1761, 2114, 2205
Tru9I	TTAA	6 cut(s)	155, 159, 551, 1761, 2114, 2205
TscAI	CASTG	6 cut(s)	1065, 1138, 1172, 1334, 1698, 2437
TseFI	GTSAC	5 cut(s)	180, 1393, 1742, 1979, 2188
TseI	GCWGC	3 cut(s)	173, 782, 2455
Tsp45I	GTSAC	5 cut(s)	180, 1393, 1742, 1979, 2188
TspDTI	ATGAA	8 cut(s)	334, 433, 529, 1098, 1207, 1312, 1542, 2124
TspGWI	ACGGA	3 cut(s)	22, 376, 992
TspRI	CASTG	6 cut(s)	1065, 1138, 1172, 1334, 1698, 2437
Tth111I	GACNNNGTC	1 cut(s)	1748
Van91I	CCANNNNNTGG	2 cut(s)	819, 1333
VpaK11BI	GGWCC	2 cut(s)	55, 350
XapI	RAATTY	3 cut(s)	11, 1214, 2460
XceI	RCATGY	1 cut(s)	985
XmiI	GTMKAC	3 cut(s)	141, 166, 594
XmnI	GAANNNNTTC	1 cut(s)	634
XspI	CTAG	5 cut(s)	245, 312, 605, 1814, 1937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.