Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0010237

Physical Location & Seq

Genomic Coordinates Forward (+)

80533093 .. 80536715

Gene Structure 3623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG469500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGGCTTCATGTATTTCGTTTTTCTCTCCGGAGTGAAAATGGATTTCTCCGTGGTAGCAAAAACAAAGAAGAAACAGATTGCCATATCCATTCTTGGAGTGCTGGTCCCTATAATAATGGTAACAATTGTTGGATTGATTTTTCGCAAGTCAATGGACAAAGAGCTAGCAAAACTCTCAACAATCGGTGGGATTGCTGCGACTTTGGCCCTGCCATTGTTCCCTGTCCTCTACCCCATCCTAAAAGAGCTCAATCTCCTTAGCTCGGATATCGGACGGCTTGCGCTGTCCATATCGGTGATTAGCGACGTGATCGGTATCACCTTTATGGTTGTCTTCGAGGCAACTAAGCAAGGGGAGGGGAAGCCCATAGCCATGTTGTGGTACGTGATATCTTTGGTATTTATTCTGGCATTCACTGTGCTTGTGGTGAGAAAAGCAATGCAGAAAATTATTGATCACACCCCGGATGGTCAATCCGTTGACCAAGCTTATGTGGTGGGGATTTTGCTGCTGGTTATGGTGATGGGCTTTTTCACGGACATGTTCGGTGTGGCCATTGCTAATGGGCCGTTTTGGTTGGGCCTAGCGATTCCAGATGGGCCCCCCCTCGGTTCGACACTGGTGGAGAGGAGTGAGACGTTAGTAATGGAGATTTTGATGCCATTTTCATTTGCTCTTATAGGTCTTTTCATTGATGTTCAAGGTATGATTATGATTGGTTGGGAGGGGATGGCACCATTGTTTGCTATGGTTGTAACTGGTTATGTGTCTAAATTCATAGCTACTTTTGCTACTTCTATGTTTTTTGAAGTGCCATTCCGAGATAGTGCTGTGCTTAGCCTTGTTATGAGCCTAAAAGGTCAAGTGGAGCTTCTGCTTTTCACTCATTGGATGGACAAAAAGATGGTACAGATACCAGGATTCACGATGCTTGTGCTACTAATAACAATAGTGACTGCATTAGCCACACCCTTGATCAGCATCCTCTATGATCCAACAAGGCCATATATGGTTCACAAAAGAAGAACAATCCAGAACACCCCAACCACAGACGCAGAACTTCGAATAGTTCTCGTCATATACGATGAAGATAGCACGGCTCCCCTCATCAATCTTCTTGAAGTCTCCAATCCAACAACAAGCACCCCATTCTCAATCTTTGCGATTCGCCTCATCGAGCTTGTTGGTCGTGCTTCTCCTGTGTTTATAGACCATCAAAAGCAAGAAGACGAGGCTGAGTTGAAATATGCAGTGTCTCAAAACATCCACAATGCCTTGAAATTGTATCAAGAAAGCAAAGGTGACTATGTCAAGCTTTTTAACTTCACAGCCATAGCACCAAACAAAACAATGTACCAAGACATTTGCGAGCTAGCACTTTTGAAAAGAGCCACACTTATGATCTTACCTTTTCACAAGGAATGTCTGGACACTCTTGGAGGTACATTGACAGAAATGGTGACAAGTGGGATTAGAAGTGTCAACGCAAATGTTATAGCACATTCGCCTTGCTCGGTTGCTGTTCTAGTTGATAAGGGTCACCTCAGACATCCACTAATGGCATTCCGAAACTCCGAGCTACACTTTGTGGTGTTGTTTTTGGGTGGCGCTGACGCGAGGGAGGCTTTGTGTTTTGCTGATAGGATGGTTGGGAATCCTAACGTGTCGTTAACCGTGATTCGGTTTCTTTCATACAATTTCGAAGGGGATAATGAGATGGAGAAGAAAATGGATGATGGCGTTGTCACATGGTTTTGGGTTAAGAATGAGAGGAATGATAGGGTTTCTTATAGAGAGGTGGTAGTGAAGAATGGGGCAGAAACAGTAGGAGCAATTCGAGCTTTGAATTATGGGGAGGATAATACTTGTGATGTTTGGATTATGGGGAGGAAACAAGGGATCAATCCTGTTCTTCTGGAAGGGTTATCAAATTGGAGTGAGAATGAAGAATTGGGTATAATTGGGGACTTTGTTTCCTCTGATGATTTTGGTGGCACTGCTTCTGTTTTAGTTGTACAGCAGCAAATGTTGAGAGGTCAAGGGACAGGTAAAGCTGGAATGGAAAAGCTTACAGCTGGCCTAAATCTATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

698

Amino Acids

77.06

Weight (kDa)

5.62

Isoelectric Point (pI)

30.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	2 - 327	4.7e-27	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	387 - 514	1.6e-10	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	530 - 676	3.9e-09	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37060 AT5G58460
fragaria_vesca	FvH4_3g39730
malus_domestica	MD03G1056200.v1.1 MD11G1057100.v1.1 MD11G1057400.v1.1
prunus_persica	Prupe.6G048600_v2.0.a1
pyrus_communis	pycom11g04800 pycom11g04810
rosa_chinensis	RchiOBHm_Chr5g0071611
rosa_laevigata	RLG00000036229
rosa_multiflora	Rmu_sc0005745.1_g000024
rosa_roxburghii	Rroxscaffold_1G00009570
rosa_rugosa	Rorug05G0413600 Rorug05G0413600 Rorug05G0413600
rosa_samantha	Rh5AG469500 Rh5BG488900 Rh5CG512800 Rh5DG499500
rosa_wichuraiana	Rw5G043620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	736
AccB7I	CCANNNNNTGG	1 cut(s)	381
AccII	CGCG	1 cut(s)	1619
AccIII	TCCGGA	1 cut(s)	29
AclWI	GGATC	2 cut(s)	989, 1910
AcoI	YGGCCR	1 cut(s)	555
AcsI	RAATTY	1 cut(s)	776
AdeI	CACNNNGTG	1 cut(s)	1591
AfaI	GTAC	5 cut(s)	386, 912, 1358, 1447, 2019
AfiI	CCNNNNNNNGG	4 cut(s)	265, 381, 611, 1683
AflIII	ACRYGT	2 cut(s)	543, 1665
AgsI	TTSAA	7 cut(s)	704, 812, 1124, 1246, 1282, 1387, 1849
AjiI	CACGTC	1 cut(s)	310
AjnI	CCWGG	1 cut(s)	919
AjuI	GAANNNNNNNTTGG	2 cut(s)	1937, 1969
Alw21I	GWGCWC	1 cut(s)	252
Alw26I	GTCTC	3 cut(s)	632, 1132, 1263
AlwI	GGATC	2 cut(s)	989, 1910
Aor13HI	TCCGGA	1 cut(s)	29
AoxI	GGCC	7 cut(s)	207, 555, 569, 583, 602, 1004, 2080
ApaI	GGGCCC	1 cut(s)	606
ApeKI	GCWGC	3 cut(s)	197, 511, 2023
ApoI	RAATTY	1 cut(s)	776
AspLEI	GCGC	2 cut(s)	286, 1613
AspS9I	GGNCC	6 cut(s)	106, 208, 569, 583, 602, 603
AsuC2I	CCSGG	1 cut(s)	467
AsuHPI	GGTGA	7 cut(s)	310, 313, 442, 535, 1316, 1474, 1535
AsuII	TTCGAA	2 cut(s)	1066, 1704
AsuNHI	GCTAGC	2 cut(s)	166, 1375
AvaII	GGWCC	1 cut(s)	106
BaeGI	GKGCMC	1 cut(s)	606
BalI	TGGCCA	1 cut(s)	557
BanI	GGYRCC	1 cut(s)	736
BanII	GRGCYC	2 cut(s)	252, 606
BbsI	GAAGAC	2 cut(s)	328, 1236
Bbv12I	GWGCWC	1 cut(s)	252
BbvI	GCAGC	3 cut(s)	184, 498, 2035
BceAI	ACGGC	3 cut(s)	293, 556, 1116
BcgI	CGANNNNNNTGC	2 cut(s)	919, 953
BciT130I	CCWGG	1 cut(s)	921
BclI	TGATCA	2 cut(s)	457, 978
BcnI	CCSGG	1 cut(s)	467
BcoDI	GTCTC	3 cut(s)	632, 1132, 1263
BfaI	CTAG	4 cut(s)	167, 587, 1376, 1529
BfoI	RGCGCY	1 cut(s)	1614
BisI	GCNGC	3 cut(s)	198, 512, 2024
BlpI	GCTNAGC	1 cut(s)	839
BlsI	GCNGC	3 cut(s)	199, 513, 2025
Bme1390I	CCNGG	2 cut(s)	467, 921
Bme18I	GGWCC	1 cut(s)	106
BmgBI	CACGTC	1 cut(s)	310
BmgT120I	GGNCC	6 cut(s)	106, 208, 569, 583, 602, 603
BmiI	GGNNCC	5 cut(s)	108, 604, 605, 738, 1104
BmrFI	CCNGG	2 cut(s)	467, 921
BmsI	GCATC	3 cut(s)	651, 921, 993
BmtI	GCTAGC	2 cut(s)	170, 1379
BpiI	GAAGAC	2 cut(s)	328, 1236
Bpu10I	CCTNAGC	1 cut(s)	260
Bpu1102I	GCTNAGC	1 cut(s)	839
Bpu14I	TTCGAA	2 cut(s)	1066, 1704
BpuMI	CCSGG	1 cut(s)	467
BsaAI	YACGTR	1 cut(s)	388
BsaBI	GATNNNNATC	2 cut(s)	317, 983
BsaJI	CCNNGG	3 cut(s)	51, 465, 610
BsaWI	WCCGGW	1 cut(s)	29
BsaXI	ACNNNNNCTCC	4 cut(s)	90, 120, 1616, 1646
Bsc4I	CCNNNNNNNGG	4 cut(s)	265, 381, 611, 1683
Bse1I	ACTGG	2 cut(s)	627, 766
Bse3DI	GCAATG	2 cut(s)	447, 558
Bse8I	GATNNNNATC	2 cut(s)	317, 983
BseAI	TCCGGA	1 cut(s)	29
BseBI	CCWGG	1 cut(s)	921
BseDI	CCNNGG	3 cut(s)	51, 465, 610
BseGI	GGATG	9 cut(s)	237, 475, 738, 900, 984, 1266, 1552, 1653, 1741
BseJI	GATNNNNATC	2 cut(s)	317, 983
BseLI	CCNNNNNNNGG	4 cut(s)	265, 381, 611, 1683
BseMI	GCAATG	2 cut(s)	447, 558
BseMII	CTCAG	2 cut(s)	1230, 1561
BseNI	ACTGG	2 cut(s)	627, 766
BseRI	GAGGAG	1 cut(s)	646
BseSI	GKGCMC	1 cut(s)	606
BseXI	GCAGC	3 cut(s)	184, 498, 2035
Bsh1236I	CGCG	1 cut(s)	1619
BshFI	GGCC	7 cut(s)	209, 557, 571, 585, 604, 1006, 2082
BshNI	GGYRCC	1 cut(s)	736
BsiHKAI	GWGCWC	1 cut(s)	252
BsiSI	CCGG	2 cut(s)	30, 467
BslFI	GGGAC	3 cut(s)	92, 1982, 2059
BslI	CCNNNNNNNGG	4 cut(s)	265, 381, 611, 1683
BsmAI	GTCTC	3 cut(s)	632, 1132, 1263
BsmBI	CGTCTC	1 cut(s)	632
BsmFI	GGGAC	3 cut(s)	92, 1982, 2059
BsmI	GAATGC	2 cut(s)	413, 1565
BsnI	GGCC	7 cut(s)	209, 557, 571, 585, 604, 1006, 2082
Bsp119I	TTCGAA	2 cut(s)	1066, 1704
Bsp120I	GGGCCC	1 cut(s)	602
Bsp1286I	GDGCHC	2 cut(s)	252, 606
Bsp13I	TCCGGA	1 cut(s)	29
Bsp1407I	TGTACA	1 cut(s)	2017
Bsp143I	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
Bsp1720I	GCTNAGC	1 cut(s)	839
BspANI	GGCC	7 cut(s)	209, 557, 571, 585, 604, 1006, 2082
BspCNI	CTCAG	2 cut(s)	1231, 1560
BspEI	TCCGGA	1 cut(s)	29
BspFNI	CGCG	1 cut(s)	1619
BspLI	GGNNCC	5 cut(s)	108, 604, 605, 738, 1104
BspOI	GCTAGC	2 cut(s)	170, 1379
BspPI	GGATC	2 cut(s)	989, 1910
BspT104I	TTCGAA	2 cut(s)	1066, 1704
BspT107I	GGYRCC	1 cut(s)	736
BsrDI	GCAATG	2 cut(s)	447, 558
BsrGI	TGTACA	1 cut(s)	2017
BsrI	ACTGG	2 cut(s)	627, 766
BssECI	CCNNGG	3 cut(s)	51, 465, 610
BssMI	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
Bst2UI	CCWGG	1 cut(s)	921
Bst4CI	ACNGT	3 cut(s)	421, 1678, 1828
BstAUI	TGTACA	1 cut(s)	2017
BstBAI	YACGTR	1 cut(s)	388
BstBI	TTCGAA	2 cut(s)	1066, 1704
BstC8I	GCNNGC	5 cut(s)	168, 282, 1373, 1377, 2080
BstDEI	CTNAG	5 cut(s)	260, 348, 839, 1239, 1547
BstDSI	CCRYGG	1 cut(s)	51
BstEII	GGTNACC	1 cut(s)	1541
BstF5I	GGATG	9 cut(s)	237, 475, 738, 900, 984, 1266, 1552, 1653, 1741
BstFNI	CGCG	1 cut(s)	1619
BstH2I	RGCGCY	1 cut(s)	1614
BstHHI	GCGC	2 cut(s)	286, 1613
BstKTI	GATC	6 cut(s)	315, 460, 981, 997, 1407, 1905
BstMAI	GTCTC	3 cut(s)	632, 1132, 1263
BstMBI	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
BstMWI	GCNNNNNNNGC	4 cut(s)	206, 791, 1625, 1841
BstNI	CCWGG	1 cut(s)	921
BstNSI	RCATGY	1 cut(s)	547
BstPI	GGTNACC	1 cut(s)	1541
BstSCI	CCNGG	2 cut(s)	465, 919
BstSLI	GKGCMC	1 cut(s)	606
BstUI	CGCG	1 cut(s)	1619
BstV1I	GCAGC	3 cut(s)	184, 498, 2035
BstV2I	GAAGAC	2 cut(s)	328, 1236
BsuRI	GGCC	7 cut(s)	209, 557, 571, 585, 604, 1006, 2082
BtgI	CCRYGG	1 cut(s)	51
BtrI	CACGTC	1 cut(s)	310
BtsCI	GGATG	9 cut(s)	237, 475, 738, 900, 984, 1266, 1552, 1653, 1741
BtsI	GCAGTG	2 cut(s)	1260, 1998
BtsIMutI	CAGTG	4 cut(s)	417, 620, 1260, 1998
Cac8I	GCNNGC	5 cut(s)	168, 282, 1373, 1377, 2080
CfoI	GCGC	2 cut(s)	286, 1613
Cfr13I	GGNCC	6 cut(s)	106, 208, 569, 583, 602, 603
CseI	GACGC	2 cut(s)	1064, 1625
Csp6I	GTAC	5 cut(s)	385, 911, 1357, 1446, 2018
CviAII	CATG	4 cut(s)	10, 376, 544, 1752
CviQI	GTAC	5 cut(s)	385, 911, 1357, 1446, 2018
DdeI	CTNAG	5 cut(s)	260, 348, 839, 1239, 1547
DpnI	GATC	6 cut(s)	314, 459, 980, 996, 1406, 1904
DpnII	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
DraIII	CACNNNGTG	1 cut(s)	1591
EaeI	YGGCCR	1 cut(s)	555
Ecl136II	GAGCTC	1 cut(s)	250
Eco24I	GRGCYC	2 cut(s)	252, 606
Eco32I	GATATC	2 cut(s)	271, 393
Eco47I	GGWCC	1 cut(s)	106
Eco53kI	GAGCTC	1 cut(s)	250
Eco91I	GGTNACC	1 cut(s)	1541
EcoICRI	GAGCTC	1 cut(s)	250
EcoO109I	RGGNCCY	1 cut(s)	603
EcoO65I	GGTNACC	1 cut(s)	1541
EcoRII	CCWGG	1 cut(s)	919
EcoRV	GATATC	2 cut(s)	271, 393
EcoT38I	GRGCYC	2 cut(s)	252, 606
Esp3I	CGTCTC	1 cut(s)	632
FaeI	CATG	4 cut(s)	13, 379, 547, 1755
FalI	AAGNNNNNCTT	2 cut(s)	858, 890
FaqI	GGGAC	3 cut(s)	92, 1982, 2059
FatI	CATG	4 cut(s)	9, 375, 543, 1751
FbaI	TGATCA	2 cut(s)	457, 978
Fnu4HI	GCNGC	3 cut(s)	198, 512, 2024
FokI	GGATG	9 cut(s)	224, 482, 745, 907, 971, 1253, 1539, 1660, 1748
FriOI	GRGCYC	2 cut(s)	252, 606
Fsp4HI	GCNGC	3 cut(s)	198, 512, 2024
FspBI	CTAG	4 cut(s)	167, 587, 1376, 1529
GlaI	GCGC	2 cut(s)	285, 1612
GluI	GCNGC	3 cut(s)	198, 512, 2024
HaeII	RGCGCY	1 cut(s)	1614
HaeIII	GGCC	7 cut(s)	209, 557, 571, 585, 604, 1006, 2082
HapII	CCGG	2 cut(s)	30, 467
HgaI	GACGC	2 cut(s)	1064, 1625
HhaI	GCGC	2 cut(s)	286, 1613
Hin1II	CATG	4 cut(s)	13, 379, 547, 1755
Hin6I	GCGC	2 cut(s)	284, 1611
HinP1I	GCGC	2 cut(s)	284, 1611
HincII	GTYRAC	3 cut(s)	484, 1486, 1674
HindII	GTYRAC	3 cut(s)	484, 1486, 1674
HindIII	AAGCTT	3 cut(s)	489, 1316, 2069
HinfI	GANTC	5 cut(s)	592, 924, 1168, 1657, 1681
HpaI	GTTAAC	1 cut(s)	1674
HpaII	CCGG	2 cut(s)	30, 467
HphI	GGTGA	7 cut(s)	310, 313, 442, 535, 1316, 1474, 1535
Hpy166II	GTNNAC	4 cut(s)	484, 1018, 1486, 1674
Hpy188I	TCNGA	7 cut(s)	268, 275, 824, 1550, 1571, 1579, 1984
Hpy188III	TCNNGA	8 cut(s)	30, 596, 928, 1036, 1121, 1292, 1430, 1919
Hpy8I	GTNNAC	4 cut(s)	484, 1018, 1486, 1674
Hpy99I	CGWCG	1 cut(s)	311
HpyAV	CCTTC	2 cut(s)	1700, 1916
HpyCH4III	ACNGT	3 cut(s)	421, 1678, 1828
HpyCH4IV	ACGT	4 cut(s)	309, 387, 641, 1665
HpyCH4V	TGCA	3 cut(s)	445, 962, 1253
HpyF10VI	GCNNNNNNNGC	4 cut(s)	206, 791, 1625, 1841
HpyF3I	CTNAG	5 cut(s)	260, 348, 839, 1239, 1547
HpySE526I	ACGT	4 cut(s)	309, 387, 641, 1665
Hsp92II	CATG	4 cut(s)	13, 379, 547, 1755
HspAI	GCGC	2 cut(s)	284, 1611
Kpn2I	TCCGGA	1 cut(s)	29
Ksp22I	TGATCA	2 cut(s)	457, 978
KspAI	GTTAAC	1 cut(s)	1674
Kzo9I	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
LmnI	GCTCC	3 cut(s)	871, 1108, 1832
Lsp1109I	GCAGC	3 cut(s)	184, 498, 2035
LweI	GCATC	3 cut(s)	651, 921, 993
MaeI	CTAG	4 cut(s)	167, 587, 1376, 1529
MaeII	ACGT	4 cut(s)	309, 387, 641, 1665
MaeIII	GTNAC	7 cut(s)	121, 757, 955, 1304, 1462, 1541, 1747
MalI	GATC	6 cut(s)	314, 459, 980, 996, 1406, 1904
MboI	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
MfeI	CAATTG	1 cut(s)	126
MhlI	GDGCHC	2 cut(s)	252, 606
MlsI	TGGCCA	1 cut(s)	557
MluNI	TGGCCA	1 cut(s)	557
MmeI	TCCRAC	3 cut(s)	112, 1022, 1160
Mox20I	TGGCCA	1 cut(s)	557
MroI	TCCGGA	1 cut(s)	29
MscI	TGGCCA	1 cut(s)	557
MseI	TTAA	3 cut(s)	1323, 1673, 1764
MslI	CAYNNNNRTG	5 cut(s)	296, 326, 374, 542, 1400
Msp20I	TGGCCA	1 cut(s)	557
MspA1I	CMGCKG	1 cut(s)	2078
MspI	CCGG	2 cut(s)	30, 467
MspR9I	CCNGG	2 cut(s)	467, 921
MunI	CAATTG	1 cut(s)	126
Mva1269I	GAATGC	2 cut(s)	413, 1565
MvaI	CCWGG	1 cut(s)	921
MvnI	CGCG	1 cut(s)	1619
MwoI	GCNNNNNNNGC	4 cut(s)	206, 791, 1625, 1841
NciI	CCSGG	1 cut(s)	467
NdeII	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
NheI	GCTAGC	2 cut(s)	166, 1375
NlaIII	CATG	4 cut(s)	13, 379, 547, 1755
NlaIV	GGNNCC	5 cut(s)	108, 604, 605, 738, 1104
NmuCI	GTSAC	5 cut(s)	955, 1304, 1462, 1541, 1747
NspI	RCATGY	1 cut(s)	547
NspV	TTCGAA	2 cut(s)	1066, 1704
PciI	ACATGT	1 cut(s)	543
PcsI	WCGNNNNNNNCGW	1 cut(s)	1083
PctI	GAATGC	2 cut(s)	413, 1565
PfeI	GAWTC	5 cut(s)	592, 924, 1168, 1657, 1681
PflFI	GACNNNGTC	1 cut(s)	1310
PflMI	CCANNNNNTGG	1 cut(s)	381
PkrI	GCNGC	3 cut(s)	199, 513, 2025
Ppu21I	YACGTR	1 cut(s)	388
PscI	ACATGT	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	252
Psp6I	CCWGG	1 cut(s)	919
PspEI	GGTNACC	1 cut(s)	1541
PspGI	CCWGG	1 cut(s)	919
PspN4I	GGNNCC	5 cut(s)	108, 604, 605, 738, 1104
PspOMI	GGGCCC	1 cut(s)	602
PspPI	GGNCC	6 cut(s)	106, 208, 569, 583, 602, 603
PsyI	GACNNNGTC	1 cut(s)	1310
PvuII	CAGCTG	1 cut(s)	2078
RsaI	GTAC	5 cut(s)	386, 912, 1358, 1447, 2019
RsaNI	GTAC	5 cut(s)	385, 911, 1357, 1446, 2018
RseI	CAYNNNNRTG	5 cut(s)	296, 326, 374, 542, 1400
SacI	GAGCTC	1 cut(s)	252
SaqAI	TTAA	3 cut(s)	1323, 1673, 1764
SatI	GCNGC	3 cut(s)	198, 512, 2024
Sau3AI	GATC	6 cut(s)	312, 457, 978, 994, 1404, 1902
Sau96I	GGNCC	6 cut(s)	106, 208, 569, 583, 602, 603
ScrFI	CCNGG	2 cut(s)	467, 921
SduI	GDGCHC	2 cut(s)	252, 606
SfaNI	GCATC	3 cut(s)	651, 921, 993
SfuI	TTCGAA	2 cut(s)	1066, 1704
SinI	GGWCC	1 cut(s)	106
SmiMI	CAYNNNNRTG	5 cut(s)	296, 326, 374, 542, 1400
SspMI	CTAG	4 cut(s)	167, 587, 1376, 1529
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	2 cut(s)	465, 919
TaaI	ACNGT	3 cut(s)	421, 1678, 1828
TaiI	ACGT	4 cut(s)	312, 390, 644, 1668
TaqI	TCGA	6 cut(s)	339, 617, 1066, 1179, 1704, 1840
TatI	WGTACW	1 cut(s)	2017
TfiI	GAWTC	5 cut(s)	592, 924, 1168, 1657, 1681
Tru1I	TTAA	3 cut(s)	1323, 1673, 1764
Tru9I	TTAA	3 cut(s)	1323, 1673, 1764
TscAI	CASTG	4 cut(s)	424, 627, 1260, 2005
TseFI	GTSAC	5 cut(s)	955, 1304, 1462, 1541, 1747
TseI	GCWGC	3 cut(s)	197, 511, 2023
Tsp45I	GTSAC	5 cut(s)	955, 1304, 1462, 1541, 1747
TspDTI	ATGAA	6 cut(s)	660, 682, 769, 1104, 1683, 1962
TspGWI	ACGGA	3 cut(s)	40, 469, 554
TspRI	CASTG	4 cut(s)	424, 627, 1260, 2005
Tth111I	GACNNNGTC	1 cut(s)	1310
Van91I	CCANNNNNTGG	1 cut(s)	381
VpaK11BI	GGWCC	1 cut(s)	106
XapI	RAATTY	1 cut(s)	776
XceI	RCATGY	1 cut(s)	547
XspI	CTAG	4 cut(s)	167, 587, 1376, 1529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.