Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010237

Physical Location & Seq

Genomic Coordinates Forward (+)

4862387 .. 4865613

Gene Structure 3227 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1057100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGTTAGGAAATTCCCACTTTACCATCCCCCAACCCCTTGGGATGGAAGTTCGAACAGATTTCAGGCGTCCGTGAAAGCTCAGGCCGGCAATGTGTCCATAGATCTCAACAATGTCTACCCTTCAACTATAATTTCATGTGGAAAGGCTCGAGAGGCAGGCTCCCTCAGCTTACTTTACGGTGAAAATCCGTTGAAAAGTTCATTCAGACTTCTGTTGTTGGAGTTCGCATTGATTAACGTCCTCACACGTATAATCCGTGTTCTTCTCAAGCCTCTCAAACAACCCAGAATTGTCTCAGACGTCATTTTACGTATATTCATTGGACCGTCAATTTTAGGCCACAGCGAGAAATTTACCTCAGTTATGTTCCCAAAAAAACTCACAATTCATAGTGAAAAATATTGGATTAATTGGATTCAGTTAATATATTTTTTCTTATCAGGAGTGAAAATGGACGTTTCCCTAGTGAAAAAAGCCAATAAGAAACAATTGTGCATAGCATTTGCGGGAATGCTCCTCCCTTTCCTACTTATATCAATTGTTGCATTCAGTTTGCGCAAGTCCATGGACAAAGAACTAGCTAGAATTTCTTCACTCGGATTCATTTGCTCCGGCTTGGCCCTACCGTTGTTTCCGGTCATCCATTCCATCCTCAAAGAGCTCAACCTTCTGAACTCGGAGATCGGACGGCTGGCATTGTCAATATCGGTGATCAGCGATGCGATTGGAGTGTGTATAATAATTTTATTTGAGGCAGCTAAGCAAGGTGAGGGCAACCACCTGGCTGTGATATGGAGTTTGTTGAGAGTTGCTGAGATCACCCCAGAGGGGCAGCCAGTGGACCAAACCTACGTGTTGGCGATTTTGTTGGGGGTTTTAGTGATGGGATGTTTGGCTGACATCTCCGGGATGGCGATCGCAAACGGTGCGTTCTGGTTGGGTTTGGCGATCCCGGATGGCCCTCCGCTTGGATCAACAATTGTGGAGAGGAGTGAATTGGTTATAGTAGATGTTTTGATGCCATTTGCTTTTGCAATGGTTGGGCTTTATGTGGATGTGAATTCCATGAGCTATGTTGGTTGGTCAAGCGAGTCCCTTGTTTGCCATCACTGCGAGTCTGCGACTGCCTATGTGGCTAAGGATGGTGTTACACTCAGCTTCATGCTAATCCTAAAAGGTCAAGTAGAGATAGCGGTTTTTCTCCATTGGATGGACAAAAAGGTAAACGTACGTCATTGGAATGTATATGAAAGAAATGTTATATGGACTTATAAAAAGCATAAAGATCATGTGAAATGGCAGTTAATTTTGTCACATCCCGACCTGGGCTCCATCACATCCTGGACTCGACTCCGTTGTAGCACGATATTGTTTACTTTGGGTCTCGACCACGCCCTCACGGTTTTGTTTCTAGGAACTCACAACTTCCCAGTAGGTCACCCATCTTGTGATTGGTTTCTCCTGATCTCGCTTAACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

495

Amino Acids

54.91

Weight (kDa)

9.0

Isoelectric Point (pI)

30.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	84 - 268	6.4e-15	Sodium/hydrogen exchanger, transmembrane
Na_H_Exchanger	PF00999	264 - 358	1.5e-06	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37060 AT5G58460
fragaria_vesca	FvH4_3g39730
malus_domestica	MD03G1056200.v1.1 MD11G1057100.v1.1 MD11G1057400.v1.1
prunus_persica	Prupe.6G048600_v2.0.a1
pyrus_communis	pycom11g04800 pycom11g04810
rosa_chinensis	RchiOBHm_Chr5g0071611
rosa_laevigata	RLG00000036229
rosa_multiflora	Rmu_sc0005745.1_g000024
rosa_roxburghii	Rroxscaffold_1G00009570
rosa_rugosa	Rorug05G0413600 Rorug05G0413600 Rorug05G0413600
rosa_samantha	Rh5AG469500 Rh5BG488900 Rh5CG512800 Rh5DG499500
rosa_wichuraiana	Rw5G043620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1275
AatII	GACGTC	1 cut(s)	306
Acc16I	TGCGCA	1 cut(s)	560
AccB7I	CCANNNNNTGG	1 cut(s)	1213
AccI	GTMKAC	1 cut(s)	117
AciI	CCGC	3 cut(s)	509, 968, 1196
AclWI	GGATC	2 cut(s)	946, 982
AcsI	RAATTY	4 cut(s)	11, 353, 588, 1063
AcyI	GRCGYC	2 cut(s)	68, 303
AfaI	GTAC	1 cut(s)	1233
AfiI	CCNNNNNNNGG	5 cut(s)	44, 831, 971, 1213, 1328
AflIII	ACRYGT	2 cut(s)	248, 855
AgsI	TTSAA	2 cut(s)	126, 196
AjnI	CCWGG	3 cut(s)	783, 1326, 1343
AluBI	AGCT	7 cut(s)	80, 171, 584, 664, 761, 1074, 1161
AluI	AGCT	7 cut(s)	80, 171, 584, 664, 761, 1074, 1161
Alw21I	GWGCWC	1 cut(s)	666
Alw26I	GTCTC	2 cut(s)	301, 1391
AlwI	GGATC	2 cut(s)	946, 982
Ama87I	CYCGRG	1 cut(s)	150
AoxI	GGCC	4 cut(s)	84, 340, 621, 961
ApeKI	GCWGC	2 cut(s)	758, 835
ApoI	RAATTY	4 cut(s)	11, 353, 588, 1063
AseI	ATTAAT	1 cut(s)	411
AsiSI	GCGATCGC	1 cut(s)	921
Asp700I	GAANNNNTTC	1 cut(s)	592
AspLEI	GCGC	1 cut(s)	561
AspS9I	GGNCC	4 cut(s)	326, 622, 844, 962
AsuC2I	CCSGG	2 cut(s)	910, 956
AsuHPI	GGTGA	5 cut(s)	194, 724, 782, 814, 1433
AsuII	TTCGAA	1 cut(s)	53
AvaI	CYCGRG	1 cut(s)	150
AvaII	GGWCC	2 cut(s)	326, 844
BanII	GRGCYC	2 cut(s)	666, 1334
Bbv12I	GWGCWC	1 cut(s)	666
BbvCI	CCTCAGC	1 cut(s)	167
BbvI	GCAGC	2 cut(s)	770, 847
BceAI	ACGGC	1 cut(s)	707
BciT130I	CCWGG	3 cut(s)	785, 1328, 1345
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	2 cut(s)	910, 956
BcoDI	GTCTC	2 cut(s)	301, 1391
BfaI	CTAG	4 cut(s)	467, 581, 585, 1415
BglI	GCCNNNNNGGC	1 cut(s)	1136
BglII	AGATCT	1 cut(s)	103
BisI	GCNGC	2 cut(s)	759, 836
BlpI	GCTNAGC	1 cut(s)	762
BlsI	GCNGC	2 cut(s)	760, 837
Bme1390I	CCNGG	5 cut(s)	785, 910, 956, 1328, 1345
Bme18I	GGWCC	2 cut(s)	326, 844
BmeT110I	CYCGRG	1 cut(s)	150
BmgT120I	GGNCC	4 cut(s)	326, 622, 844, 962
BmiI	GGNNCC	2 cut(s)	163, 1333
BmrFI	CCNGG	5 cut(s)	785, 910, 956, 1328, 1345
BmrI	ACTGGG	1 cut(s)	1427
BmsI	GCATC	2 cut(s)	712, 1011
BmuI	ACTGGG	1 cut(s)	1427
BplI	GAGNNNNNCTC	2 cut(s)	146, 178
Bpu10I	CCTNAGC	3 cut(s)	81, 167, 1140
Bpu1102I	GCTNAGC	1 cut(s)	762
Bpu14I	TTCGAA	1 cut(s)	53
BpuEI	CTTGAG	1 cut(s)	254
BpuMI	CCSGG	2 cut(s)	910, 956
BsaAI	YACGTR	3 cut(s)	251, 314, 856
BsaBI	GATNNNNATC	1 cut(s)	917
BsaHI	GRCGYC	2 cut(s)	68, 303
BsaI	GGTCTC	1 cut(s)	1391
BsaJI	CCNNGG	3 cut(s)	38, 567, 1327
BsaWI	WCCGGW	1 cut(s)	637
BsaXI	ACNNNNNCTCC	2 cut(s)	1316, 1346
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 831, 971, 1213, 1328
Bse118I	RCCGGY	1 cut(s)	86
Bse1I	ACTGG	2 cut(s)	839, 1433
Bse3DI	GCAATG	2 cut(s)	97, 1044
Bse8I	GATNNNNATC	1 cut(s)	917
BseBI	CCWGG	3 cut(s)	785, 1328, 1345
BseDI	CCNNGG	3 cut(s)	38, 567, 1327
BseJI	GATNNNNATC	1 cut(s)	917
BseLI	CCNNNNNNNGG	5 cut(s)	44, 831, 971, 1213, 1328
BseMI	GCAATG	2 cut(s)	97, 1044
BseMII	CTCAG	6 cut(s)	95, 181, 312, 375, 807, 1171
BseNI	ACTGG	2 cut(s)	839, 1433
BseRI	GAGGAG	2 cut(s)	509, 1006
BseXI	GCAGC	2 cut(s)	770, 847
Bsh1285I	CGRYCG	1 cut(s)	921
BshFI	GGCC	4 cut(s)	86, 342, 623, 963
BsiEI	CGRYCG	1 cut(s)	921
BsiHKAI	GWGCWC	1 cut(s)	666
BsiHKCI	CYCGRG	1 cut(s)	150
BsiSI	CCGG	5 cut(s)	87, 615, 638, 909, 956
BsiWI	CGTACG	1 cut(s)	1231
BslFI	GGGAC	1 cut(s)	1081
BslI	CCNNNNNNNGG	5 cut(s)	44, 831, 971, 1213, 1328
BsmAI	GTCTC	2 cut(s)	301, 1391
BsmFI	GGGAC	1 cut(s)	1081
BsmI	GAATGC	2 cut(s)	519, 548
BsnI	GGCC	4 cut(s)	86, 342, 623, 963
Bso31I	GGTCTC	1 cut(s)	1391
BsoBI	CYCGRG	1 cut(s)	150
Bsp119I	TTCGAA	1 cut(s)	53
Bsp1286I	GDGCHC	2 cut(s)	666, 1334
Bsp143I	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
Bsp1720I	GCTNAGC	1 cut(s)	762
Bsp19I	CCATGG	1 cut(s)	567
BspACI	CCGC	3 cut(s)	509, 968, 1196
BspANI	GGCC	4 cut(s)	86, 342, 623, 963
BspCNI	CTCAG	6 cut(s)	94, 180, 311, 374, 808, 1170
BspLI	GGNNCC	2 cut(s)	163, 1333
BspPI	GGATC	2 cut(s)	946, 982
BspT104I	TTCGAA	1 cut(s)	53
BspTNI	GGTCTC	1 cut(s)	1391
BsrDI	GCAATG	2 cut(s)	97, 1044
BsrFI	RCCGGY	1 cut(s)	86
BsrI	ACTGG	2 cut(s)	839, 1433
BssAI	RCCGGY	1 cut(s)	86
BssECI	CCNNGG	3 cut(s)	38, 567, 1327
BssMI	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
BssNI	GRCGYC	2 cut(s)	68, 303
BssT1I	CCWWGG	2 cut(s)	38, 567
Bst2UI	CCWGG	3 cut(s)	785, 1328, 1345
Bst4CI	ACNGT	5 cut(s)	182, 330, 630, 929, 1405
BstACI	GRCGYC	2 cut(s)	68, 303
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstBAI	YACGTR	3 cut(s)	251, 314, 856
BstBI	TTCGAA	1 cut(s)	53
BstC8I	GCNNGC	3 cut(s)	88, 160, 696
BstDEI	CTNAG	8 cut(s)	81, 167, 298, 361, 762, 816, 1140, 1157
BstDSI	CCRYGG	1 cut(s)	567
BstEII	GGTNACC	1 cut(s)	1439
BstHHI	GCGC	1 cut(s)	561
BstKTI	GATC	9 cut(s)	106, 687, 717, 822, 921, 954, 977, 1291, 1470
BstMAI	GTCTC	2 cut(s)	301, 1391
BstMBI	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
BstMCI	CGRYCG	1 cut(s)	921
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 168, 929, 1113, 1136
BstNI	CCWGG	3 cut(s)	785, 1328, 1345
BstPI	GGTNACC	1 cut(s)	1439
BstSCI	CCNGG	5 cut(s)	783, 908, 954, 1326, 1343
BstSNI	TACGTA	1 cut(s)	314
BstV1I	GCAGC	2 cut(s)	770, 847
BstX2I	RGATCY	1 cut(s)	103
BstXI	CCANNNNNNTGG	1 cut(s)	39
BstYI	RGATCY	1 cut(s)	103
BsuRI	GGCC	4 cut(s)	86, 342, 623, 963
BtgI	CCRYGG	1 cut(s)	567
BtgZI	GCGATG	1 cut(s)	735
BtsI	GCAGTG	1 cut(s)	1111
BtsIMutI	CAGTG	2 cut(s)	846, 1111
Cac8I	GCNNGC	3 cut(s)	88, 160, 696
CfoI	GCGC	1 cut(s)	561
Cfr10I	RCCGGY	1 cut(s)	86
Cfr13I	GGNCC	4 cut(s)	326, 622, 844, 962
CseI	GACGC	1 cut(s)	57
Csp6I	GTAC	1 cut(s)	1232
CspCI	CAANNNNNGTGG	2 cut(s)	966, 1001
CviAII	CATG	5 cut(s)	138, 568, 1069, 1165, 1292
CviQI	GTAC	1 cut(s)	1232
DdeI	CTNAG	8 cut(s)	81, 167, 298, 361, 762, 816, 1140, 1157
DpnI	GATC	9 cut(s)	105, 686, 716, 821, 920, 953, 976, 1290, 1469
DpnII	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
Ecl136II	GAGCTC	1 cut(s)	664
Eco105I	TACGTA	1 cut(s)	314
Eco130I	CCWWGG	2 cut(s)	38, 567
Eco24I	GRGCYC	2 cut(s)	666, 1334
Eco31I	GGTCTC	1 cut(s)	1391
Eco47I	GGWCC	2 cut(s)	326, 844
Eco53kI	GAGCTC	1 cut(s)	664
Eco88I	CYCGRG	1 cut(s)	150
Eco91I	GGTNACC	1 cut(s)	1439
EcoICRI	GAGCTC	1 cut(s)	664
EcoO65I	GGTNACC	1 cut(s)	1439
EcoRI	GAATTC	1 cut(s)	1063
EcoRII	CCWGG	3 cut(s)	783, 1326, 1343
EcoT14I	CCWWGG	2 cut(s)	38, 567
EcoT38I	GRGCYC	2 cut(s)	666, 1334
ErhI	CCWWGG	2 cut(s)	38, 567
FaeI	CATG	5 cut(s)	141, 571, 1072, 1168, 1295
FaqI	GGGAC	1 cut(s)	1081
FatI	CATG	5 cut(s)	137, 567, 1068, 1164, 1291
FauI	CCCGC	1 cut(s)	502
FbaI	TGATCA	1 cut(s)	714
FblI	GTMKAC	1 cut(s)	117
Fnu4HI	GCNGC	2 cut(s)	759, 836
FriOI	GRGCYC	2 cut(s)	666, 1334
Fsp4HI	GCNGC	2 cut(s)	759, 836
FspBI	CTAG	4 cut(s)	467, 581, 585, 1415
FspI	TGCGCA	1 cut(s)	560
GlaI	GCGC	1 cut(s)	560
GluI	GCNGC	2 cut(s)	759, 836
HaeIII	GGCC	4 cut(s)	86, 342, 623, 963
HapII	CCGG	5 cut(s)	87, 615, 638, 909, 956
HgaI	GACGC	1 cut(s)	57
HhaI	GCGC	1 cut(s)	561
Hin1I	GRCGYC	2 cut(s)	68, 303
Hin1II	CATG	5 cut(s)	141, 571, 1072, 1168, 1295
Hin6I	GCGC	1 cut(s)	559
HinP1I	GCGC	1 cut(s)	559
HinfI	GANTC	6 cut(s)	418, 603, 1094, 1118, 1348, 1353
HpaII	CCGG	5 cut(s)	87, 615, 638, 909, 956
HphI	GGTGA	5 cut(s)	194, 724, 782, 814, 1433
Hpy166II	GTNNAC	4 cut(s)	118, 844, 1228, 1377
Hpy188I	TCNGA	6 cut(s)	209, 301, 602, 675, 682, 689
Hpy188III	TCNNGA	5 cut(s)	152, 444, 1322, 1388, 1465
Hpy8I	GTNNAC	4 cut(s)	118, 844, 1228, 1377
HpyAV	CCTTC	2 cut(s)	132, 680
HpyCH4III	ACNGT	5 cut(s)	182, 330, 630, 929, 1405
HpyCH4IV	ACGT	8 cut(s)	240, 250, 303, 313, 459, 855, 1230, 1234
HpyCH4V	TGCA	3 cut(s)	498, 548, 1037
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 168, 929, 1113, 1136
HpyF3I	CTNAG	8 cut(s)	81, 167, 298, 361, 762, 816, 1140, 1157
HpySE526I	ACGT	8 cut(s)	240, 250, 303, 313, 459, 855, 1230, 1234
Hsp92I	GRCGYC	2 cut(s)	68, 303
Hsp92II	CATG	5 cut(s)	141, 571, 1072, 1168, 1295
HspAI	GCGC	1 cut(s)	559
KroI	GCCGGC	1 cut(s)	86
KroNI	GCCGGC	1 cut(s)	88
Ksp22I	TGATCA	1 cut(s)	714
Kzo9I	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
LmnI	GCTCC	4 cut(s)	167, 522, 617, 1337
Lsp1109I	GCAGC	2 cut(s)	770, 847
LweI	GCATC	2 cut(s)	712, 1011
MaeI	CTAG	4 cut(s)	467, 581, 585, 1415
MaeII	ACGT	8 cut(s)	240, 250, 303, 313, 459, 855, 1230, 1234
MaeIII	GTNAC	3 cut(s)	1150, 1314, 1439
MalI	GATC	9 cut(s)	105, 686, 716, 821, 920, 953, 976, 1290, 1469
MboI	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
MboII	GAAGA	2 cut(s)	257, 585
MfeI	CAATTG	3 cut(s)	491, 540, 981
MflI	RGATCY	1 cut(s)	103
MhlI	GDGCHC	2 cut(s)	666, 1334
MlyI	GAGTC	4 cut(s)	1103, 1127, 1342, 1347
MmeI	TCCRAC	1 cut(s)	201
MroNI	GCCGGC	1 cut(s)	86
MroXI	GAANNNNTTC	1 cut(s)	592
MseI	TTAA	5 cut(s)	237, 411, 425, 1307, 1476
MslI	CAYNNNNRTG	1 cut(s)	1242
MspI	CCGG	5 cut(s)	87, 615, 638, 909, 956
MspR9I	CCNGG	5 cut(s)	785, 910, 956, 1328, 1345
MunI	CAATTG	3 cut(s)	491, 540, 981
Mva1269I	GAATGC	2 cut(s)	519, 548
MvaI	CCWGG	3 cut(s)	785, 1328, 1345
MwoI	GCNNNNNNNGC	5 cut(s)	155, 168, 929, 1113, 1136
NaeI	GCCGGC	1 cut(s)	88
NciI	CCSGG	2 cut(s)	910, 956
NcoI	CCATGG	1 cut(s)	567
NdeII	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
NgoMIV	GCCGGC	1 cut(s)	86
NlaIII	CATG	5 cut(s)	141, 571, 1072, 1168, 1295
NlaIV	GGNNCC	2 cut(s)	163, 1333
NmuCI	GTSAC	2 cut(s)	1314, 1439
NsbI	TGCGCA	1 cut(s)	560
NspV	TTCGAA	1 cut(s)	53
PaeR7I	CTCGAG	1 cut(s)	150
PcsI	WCGNNNNNNNCGW	1 cut(s)	256
PctI	GAATGC	2 cut(s)	519, 548
PdiI	GCCGGC	1 cut(s)	88
PdmI	GAANNNNTTC	1 cut(s)	592
PfeI	GAWTC	2 cut(s)	418, 603
Pfl23II	CGTACG	1 cut(s)	1231
PflMI	CCANNNNNTGG	1 cut(s)	1213
PfoI	TCCNGGA	3 cut(s)	908, 954, 1343
PkrI	GCNGC	2 cut(s)	760, 837
Ple19I	CGATCG	1 cut(s)	921
PleI	GAGTC	4 cut(s)	1102, 1126, 1342, 1347
PpsI	GAGTC	4 cut(s)	1102, 1126, 1342, 1347
Ppu21I	YACGTR	3 cut(s)	251, 314, 856
PshBI	ATTAAT	1 cut(s)	411
PsiI	TTATAA	1 cut(s)	1275
Psp124BI	GAGCTC	1 cut(s)	666
Psp6I	CCWGG	3 cut(s)	783, 1326, 1343
PspEI	GGTNACC	1 cut(s)	1439
PspGI	CCWGG	3 cut(s)	783, 1326, 1343
PspLI	CGTACG	1 cut(s)	1231
PspN4I	GGNNCC	2 cut(s)	163, 1333
PspPI	GGNCC	4 cut(s)	326, 622, 844, 962
PsuI	RGATCY	1 cut(s)	103
PvuI	CGATCG	1 cut(s)	921
RgaI	GCGATCGC	1 cut(s)	921
RsaI	GTAC	1 cut(s)	1233
RsaNI	GTAC	1 cut(s)	1232
RseI	CAYNNNNRTG	1 cut(s)	1242
SacI	GAGCTC	1 cut(s)	666
SaqAI	TTAA	5 cut(s)	237, 411, 425, 1307, 1476
SatI	GCNGC	2 cut(s)	759, 836
Sau3AI	GATC	9 cut(s)	103, 684, 714, 819, 918, 951, 974, 1288, 1467
Sau96I	GGNCC	4 cut(s)	326, 622, 844, 962
SchI	GAGTC	4 cut(s)	1103, 1127, 1342, 1347
ScrFI	CCNGG	5 cut(s)	785, 910, 956, 1328, 1345
SduI	GDGCHC	2 cut(s)	666, 1334
SfaAI	GCGATCGC	1 cut(s)	921
SfaNI	GCATC	2 cut(s)	712, 1011
Sfr274I	CTCGAG	1 cut(s)	150
SfuI	TTCGAA	1 cut(s)	53
SgfI	GCGATCGC	1 cut(s)	921
SinI	GGWCC	2 cut(s)	326, 844
SlaI	CTCGAG	1 cut(s)	150
SmiMI	CAYNNNNRTG	1 cut(s)	1242
SmlI	CTYRAG	2 cut(s)	150, 269
SmoI	CTYRAG	2 cut(s)	150, 269
SnaBI	TACGTA	1 cut(s)	314
SsiI	CCGC	3 cut(s)	509, 968, 1196
SspI	AATATT	1 cut(s)	404
SspMI	CTAG	4 cut(s)	467, 581, 585, 1415
SstI	GAGCTC	1 cut(s)	666
StyD4I	CCNGG	5 cut(s)	783, 908, 954, 1326, 1343
StyI	CCWWGG	2 cut(s)	38, 567
TaaI	ACNGT	5 cut(s)	182, 330, 630, 929, 1405
TaiI	ACGT	8 cut(s)	243, 253, 306, 316, 462, 858, 1233, 1237
TaqI	TCGA	4 cut(s)	53, 151, 1351, 1389
TfiI	GAWTC	2 cut(s)	418, 603
Tru1I	TTAA	5 cut(s)	237, 411, 425, 1307, 1476
Tru9I	TTAA	5 cut(s)	237, 411, 425, 1307, 1476
TscAI	CASTG	2 cut(s)	846, 1118
TseFI	GTSAC	2 cut(s)	1314, 1439
TseI	GCWGC	2 cut(s)	758, 835
Tsp45I	GTSAC	2 cut(s)	1314, 1439
TspDTI	ATGAA	7 cut(s)	126, 192, 310, 380, 595, 1153, 1266
TspGWI	ACGGA	4 cut(s)	61, 180, 248, 1346
TspRI	CASTG	2 cut(s)	846, 1118
Van91I	CCANNNNNTGG	1 cut(s)	1213
VpaK11BI	GGWCC	2 cut(s)	326, 844
VspI	ATTAAT	1 cut(s)	411
XapI	RAATTY	4 cut(s)	11, 353, 588, 1063
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1452
XhoI	CTCGAG	1 cut(s)	150
XmiI	GTMKAC	1 cut(s)	117
XmnI	GAANNNNTTC	1 cut(s)	592
XspI	CTAG	4 cut(s)	467, 581, 585, 1415
ZraI	GACGTC	1 cut(s)	304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.