Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007251

Physical Location & Seq

Genomic Coordinates Reverse (-)

34610613 .. 34616922

Gene Structure 6310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g41130.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGACGCGGTGGCGGAAGGGCTGTGGGGTCTGGCGGACTACCAGGAGCAGAGCGGCGAGATCGGAAAAGCCATAAAGTGCCTGGAAGCCATCTGCCAAAGCGACGTGTCGTTTTTCCCCATCGTCGAGGTCAAAACCCGTCTCCGAATCGCTACTCTCCTCCTCAAGCACTCCCACAACGTCAACCACGCCAGGGCTCACCTCGAGCGCGCGCAGCTCCTCCTCAAATCCATCCCTTCCTGCTTCGATTTGAAGTGCAGAGCTTACAGCCTCCTCAGCCAGTGTTACCATCTCGTCGGCTCTATTGCGCCTCAGAAACAGGTGCTCCACAAGGCCCTGGAGCTCACTGCTAGCGGATATGATATTGGGGTGAAGCTGTGGTCTTGCAACTTCAACTCTCAGCTGGCGAATGCGTTGATTATTGAGGGAGATTACCAGAGTTCGATTGCGGCATTGGATGCTGGATATGTTTGCGCTACTCAGATAGGTTATCCGGAGTTGCAGATGTTCTTTGCAACTTGTATGCTGCATGTACATCTTATGCACTGGGAGGATGAGAGTTCAGTTGAGCAAGCTGTTGCCAAATGTGATGAGGTCTGGGAGTTCCTTCACCCACAGAAAAGACAACAATGCCTTGGCTTATTCTTCTACAATGAACTGCTGCATATATTTTATCGTCTTCGAATATGTGACTACAAGAATGCTACACCACACATAGAAAGATTAGATGCTGCCATGAAGGCTGATTTGAAGAAAACGCAGCATCTGCAACAGTTGACTAAGGAATTTGATGCCTTAAATGAGAGTCTCACTCGCCCTGAACTACATCACAGGGAGAGGTTAGCATTGTCTGAGAAACAGTCTCGGATACAACACCAGCTAGCTTCTCTTACTACATTGAGTTCAACTAGCAAAGGAACTTTGGAACCAGCTTGTTTTGGAAATATGAAGCGCACTGATGGAGATAAGCTTGAGCTAGCCCCACCTCCTATTGATGGGGAATGGCTACCAAAAAGTGCAGTCTATGCTCTTGTTGATCTTATGATGGTTGTGTTGAGTCGTCCAAAAGGAAATTTTAAGGATTGTGGAAAGCGTATTCAATCTGGAATGGATACCATTCAAGAGGAGCTTTTGAAGCTTGGAATAACCGATGGTGTGAGAGAAGTGAATTTGCAGCACTCTGCCATTTGGATGGCTGGTGTGTATTTAATGCTCCTTATGCAGTTCTTTGAAAACAAAGTAGCCATGGAGTTGACACGATCTGAATTTGTAGAAGCACAAGAGGCGTTAGTGCAGATGAAGAATTGGTTTATACGATTTCCAACTATTTTACAGACATGTGAGAGCATCATTGAAATGCTCAGGGGGCAGTATGCTCATTCTGTTGGTTGTTATAGAGAGGCAGCTTTTCATTTCATTGAAGCTGTAAAGCTCACAGAGAGCAAATCGATGCAAGCGCTTTGCCAAATATATGCTGCCGTCTCCTACATATGCATTGGTGATTCTGAATCATCTACACAGGCACTTGACTTGATTGGACCAGTTTACAGAATGATGGATTCATTTGTTGGAGTTCGGGAGAAAACCAACTGCCTTTTTGCCTATGGTCTTTTATTGATGAAGCAACAAGATCTACAGGAAGCAAGAAACCGACTTGCCAAAGGTTTGCAAATGACACATAATCAGCTAGGGAACCTTCAACTTGTTTCACAGTATTTGACAGTCCTTGGGAGTTTGGCATTGGCGCTGCATGACACTGGACAAGCAAGAGAAATTTTGAGATCATCCTTGACATTGGCAAAGAAGCTTTCTGATATCCCCACACAGATATGGGTGCTCTCTGTTTTGACAGCTTTATATCAAGAAGTGGGTGAGAAGGGCAGTGAAATGGAGAATGTTGAGTTTCAGAAGAGTAGAATGGATGCTCTGCAACAGAAACTTGTAGATGCACATTCTTCCATTCACCACATTGAACTAATTGACACAGTTAAGATTGACGTCCAGCAATTTCATGAGCTTGGCAGTAATCGTTCAACCATGGGCCCACCCATGACCGCCAACCTTGACATTCCAGAATCTGTCGGCCTGTCTGCCCCATTGCCTGGTCATTCAACATCAAGGCTAGTAGATATAGACATAGGAAACATAGGAAGACGTGGGAAGAGGAAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000278 GO:0000280 GO:0000785 GO:0000819 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007064 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016043 GO:0022402 GO:0022414 GO:0032116 GO:0032501 GO:0032502 GO:0032991 GO:0034086 GO:0034088 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0071840 GO:0097159 GO:0098813 GO:0140014 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cohesin_load

Protein Analysis

725

Amino Acids

81.48

Weight (kDa)

6.3

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cohesin_load	PF10345	21 - 506	9.2e-26	Cohesin loading factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007251)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51340
fragaria_vesca	FvH4_3g41130 FvH4_3g41130 FvH4_3g41130 FvH4_3g41130 FvH4_3g41130
malus_domestica	MD03G1047100.v1.1
prunus_persica	Prupe.6G038300_v2.0.a1 Prupe.6G038300_v2.0.a1 Prupe.6G038300_v2.0.a1 Prupe.6G038300_v2.0.a1
pyrus_communis	pycom03g03710
rosa_chinensis	RchiOBHm_Chr5g0073921
rosa_laevigata	RLG00000036425
rosa_multiflora	Rmu_co8214482.1_g000001 Rmu_sc0000470.1_g000018 Rmu_sc0038496.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007450
rosa_rugosa	Rorug05G0427400 Rorug05G0427500
rosa_samantha	Rh5AG484400 Rh5BG505100 Rh5CG528900 Rh5DG517400
rosa_wichuraiana	Rw5G045030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2001
AccB7I	CCANNNNNTGG	1 cut(s)	2102
AccBSI	CCGCTC	1 cut(s)	54
AccII	CGCG	3 cut(s)	8, 210, 212
AccIII	TCCGGA	1 cut(s)	493
AciI	CCGC	7 cut(s)	8, 14, 35, 54, 354, 449, 2055
AcsI	RAATTY	5 cut(s)	785, 1072, 1168, 1265, 1773
AcyI	GRCGYC	1 cut(s)	1998
AfaI	GTAC	1 cut(s)	534
AfeI	AGCGCT	1 cut(s)	1458
AfiI	CCNNNNNNNGG	3 cut(s)	193, 995, 2102
AflIII	ACRYGT	2 cut(s)	105, 1337
AjiI	CACGTC	2 cut(s)	106, 2156
AjnI	CCWGG	5 cut(s)	42, 81, 191, 336, 2101
Alw21I	GWGCWC	3 cut(s)	327, 345, 1839
Alw26I	GTCTC	4 cut(s)	146, 812, 867, 1486
AlwNI	CAGNNNCTG	2 cut(s)	766, 2078
Ama87I	CYCGRG	1 cut(s)	203
Aor13HI	TCCGGA	1 cut(s)	493
Aor51HI	AGCGCT	1 cut(s)	1458
AoxI	GGCC	3 cut(s)	333, 2041, 2083
ApaI	GGGCCC	1 cut(s)	2045
ApeKI	GCWGC	9 cut(s)	214, 526, 661, 731, 760, 1174, 1403, 1475, 1747
ApoI	RAATTY	5 cut(s)	785, 1072, 1168, 1265, 1773
AspLEI	GCGC	8 cut(s)	210, 212, 214, 310, 476, 954, 1459, 1747
AspS9I	GGNCC	4 cut(s)	334, 1538, 2041, 2042
AsuHPI	GGTGA	6 cut(s)	191, 382, 602, 1511, 1883, 1955
AsuII	TTCGAA	1 cut(s)	682
AsuNHI	GCTAGC	3 cut(s)	350, 880, 976
AvaI	CYCGRG	1 cut(s)	203
AvaII	GGWCC	1 cut(s)	1538
BaeGI	GKGCMC	1 cut(s)	2045
BanII	GRGCYC	3 cut(s)	199, 345, 2045
BbsI	GAAGAC	2 cut(s)	671, 2158
Bbv12I	GWGCWC	3 cut(s)	327, 345, 1839
BbvCI	CCTCAGC	1 cut(s)	275
BbvI	GCAGC	9 cut(s)	226, 513, 648, 718, 772, 1186, 1415, 1462, 1734
BceAI	ACGGC	1 cut(s)	1463
BciT130I	CCWGG	5 cut(s)	44, 83, 193, 338, 2103
BciVI	GTATCC	2 cut(s)	861, 1105
BcoDI	GTCTC	4 cut(s)	146, 812, 867, 1486
BfaI	CTAG	6 cut(s)	351, 881, 909, 977, 1688, 2123
BfmI	CTRYAG	1 cut(s)	1634
BfoI	RGCGCY	2 cut(s)	1460, 1748
BfuI	GTATCC	2 cut(s)	861, 1105
BglI	GCCNNNNNGGC	1 cut(s)	740
BglII	AGATCT	1 cut(s)	1630
Bme1390I	CCNGG	5 cut(s)	44, 83, 193, 338, 2103
Bme18I	GGWCC	1 cut(s)	1538
BmeT110I	CYCGRG	1 cut(s)	203
BmgBI	CACGTC	2 cut(s)	106, 2156
BmgT120I	GGNCC	4 cut(s)	334, 1538, 2041, 2042
BmiI	GGNNCC	3 cut(s)	927, 1694, 2043
BmrFI	CCNGG	5 cut(s)	44, 83, 193, 338, 2103
BmrI	ACTGGG	1 cut(s)	556
BmsI	GCATC	8 cut(s)	448, 718, 772, 781, 1356, 1440, 1912, 1936
BmtI	GCTAGC	3 cut(s)	354, 884, 980
BmuI	ACTGGG	1 cut(s)	556
BpiI	GAAGAC	2 cut(s)	671, 2158
BplI	GAGNNNNNCTC	2 cut(s)	796, 828
BpmI	CTGGAG	1 cut(s)	359
Bpu10I	CCTNAGC	2 cut(s)	275, 1361
Bpu14I	TTCGAA	1 cut(s)	682
BpuEI	CTTGAG	2 cut(s)	149, 992
Bsa29I	ATCGAT	1 cut(s)	1448
BsaHI	GRCGYC	1 cut(s)	1998
BsaJI	CCNNGG	6 cut(s)	192, 336, 634, 1245, 1726, 2037
BsaWI	WCCGGW	1 cut(s)	493
BsaXI	ACNNNNNCTCC	2 cut(s)	309, 339
Bsc4I	CCNNNNNNNGG	3 cut(s)	193, 995, 2102
Bse1I	ACTGG	4 cut(s)	280, 551, 1541, 1762
Bse3DI	GCAATG	1 cut(s)	2096
BseAI	TCCGGA	1 cut(s)	493
BseBI	CCWGG	5 cut(s)	44, 83, 193, 338, 2103
BseCI	ATCGAT	1 cut(s)	1448
BseDI	CCNNGG	6 cut(s)	192, 336, 634, 1245, 1726, 2037
BseGI	GGATG	6 cut(s)	231, 463, 559, 1197, 1784, 1927
BseLI	CCNNNNNNNGG	3 cut(s)	193, 995, 2102
BseMI	GCAATG	1 cut(s)	2096
BseMII	CTCAG	6 cut(s)	289, 326, 413, 494, 843, 1375
BseNI	ACTGG	4 cut(s)	280, 551, 1541, 1762
BsePI	GCGCGC	2 cut(s)	208, 210
BseRI	GAGGAG	6 cut(s)	149, 152, 209, 212, 263, 1139
BseSI	GKGCMC	1 cut(s)	2045
BseXI	GCAGC	9 cut(s)	226, 513, 648, 718, 772, 1186, 1415, 1462, 1734
BsgI	GTGCAG	3 cut(s)	277, 1038, 1313
Bsh1236I	CGCG	3 cut(s)	8, 210, 212
BshFI	GGCC	3 cut(s)	335, 2043, 2085
BshVI	ATCGAT	1 cut(s)	1448
BsiHKAI	GWGCWC	3 cut(s)	327, 345, 1839
BsiHKCI	CYCGRG	1 cut(s)	203
BsiSI	CCGG	1 cut(s)	494
BslI	CCNNNNNNNGG	3 cut(s)	193, 995, 2102
BsmAI	GTCTC	4 cut(s)	146, 812, 867, 1486
BsmBI	CGTCTC	2 cut(s)	146, 1486
BsmI	GAATGC	2 cut(s)	415, 706
BsnI	GGCC	3 cut(s)	335, 2043, 2085
BsoBI	CYCGRG	1 cut(s)	203
Bsp119I	TTCGAA	1 cut(s)	682
Bsp120I	GGGCCC	1 cut(s)	2041
Bsp1286I	GDGCHC	5 cut(s)	199, 327, 345, 1839, 2045
Bsp13I	TCCGGA	1 cut(s)	493
Bsp1407I	TGTACA	1 cut(s)	532
Bsp143I	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
Bsp19I	CCATGG	2 cut(s)	1245, 2037
BspACI	CCGC	7 cut(s)	8, 14, 35, 54, 354, 449, 2055
BspANI	GGCC	3 cut(s)	335, 2043, 2085
BspCNI	CTCAG	6 cut(s)	288, 325, 412, 493, 844, 1374
BspDI	ATCGAT	1 cut(s)	1448
BspEI	TCCGGA	1 cut(s)	493
BspFNI	CGCG	3 cut(s)	8, 210, 212
BspHI	TCATGA	1 cut(s)	2011
BspLI	GGNNCC	3 cut(s)	927, 1694, 2043
BspOI	GCTAGC	3 cut(s)	354, 884, 980
BspT104I	TTCGAA	1 cut(s)	682
BsrBI	CCGCTC	1 cut(s)	54
BsrDI	GCAATG	1 cut(s)	2096
BsrGI	TGTACA	1 cut(s)	532
BsrI	ACTGG	4 cut(s)	280, 551, 1541, 1762
BssECI	CCNNGG	6 cut(s)	192, 336, 634, 1245, 1726, 2037
BssHII	GCGCGC	2 cut(s)	208, 210
BssMI	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
BssNI	GRCGYC	1 cut(s)	1998
BssT1I	CCWWGG	4 cut(s)	634, 1245, 1726, 2037
Bst2UI	CCWGG	5 cut(s)	44, 83, 193, 338, 2103
Bst4CI	ACNGT	5 cut(s)	774, 861, 1713, 1723, 1987
Bst6I	CTCTTC	2 cut(s)	1904, 2156
BstACI	GRCGYC	1 cut(s)	1998
BstAPI	GCANNNNNTGC	3 cut(s)	458, 766, 1025
BstAUI	TGTACA	1 cut(s)	532
BstBI	TTCGAA	1 cut(s)	682
BstC8I	GCNNGC	8 cut(s)	210, 212, 352, 405, 573, 882, 978, 1455
BstDEI	CTNAG	7 cut(s)	275, 312, 399, 480, 780, 852, 1361
BstDSI	CCRYGG	2 cut(s)	1245, 2037
BstF5I	GGATG	6 cut(s)	231, 463, 559, 1197, 1784, 1927
BstFNI	CGCG	3 cut(s)	8, 210, 212
BstH2I	RGCGCY	2 cut(s)	1460, 1748
BstHHI	GCGC	8 cut(s)	210, 212, 214, 310, 476, 954, 1459, 1747
BstKTI	GATC	5 cut(s)	63, 1039, 1262, 1633, 1784
BstMAI	GTCTC	4 cut(s)	146, 812, 867, 1486
BstMBI	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
BstNI	CCWGG	5 cut(s)	44, 83, 193, 338, 2103
BstNSI	RCATGY	2 cut(s)	533, 1341
BstSCI	CCNGG	5 cut(s)	42, 81, 191, 336, 2101
BstSFI	CTRYAG	1 cut(s)	1634
BstSLI	GKGCMC	1 cut(s)	2045
BstUI	CGCG	3 cut(s)	8, 210, 212
BstV1I	GCAGC	9 cut(s)	226, 513, 648, 718, 772, 1186, 1415, 1462, 1734
BstV2I	GAAGAC	2 cut(s)	671, 2158
BstX2I	RGATCY	1 cut(s)	1630
BstXI	CCANNNNNNTGG	1 cut(s)	1192
BstYI	RGATCY	1 cut(s)	1630
Bsu15I	ATCGAT	1 cut(s)	1448
BsuI	GTATCC	2 cut(s)	861, 1105
BsuRI	GGCC	3 cut(s)	335, 2043, 2085
BsuTUI	ATCGAT	1 cut(s)	1448
BtgI	CCRYGG	2 cut(s)	1245, 2037
BtrI	CACGTC	2 cut(s)	106, 2156
BtsCI	GGATG	6 cut(s)	231, 463, 559, 1197, 1784, 1927
BtsI	GCAGTG	2 cut(s)	345, 1888
BtsIMutI	CAGTG	6 cut(s)	287, 345, 544, 954, 1755, 1888
Cac8I	GCNNGC	8 cut(s)	210, 212, 352, 405, 573, 882, 978, 1455
CaiI	CAGNNNCTG	2 cut(s)	766, 2078
CciI	TCATGA	1 cut(s)	2011
CfoI	GCGC	8 cut(s)	210, 212, 214, 310, 476, 954, 1459, 1747
Cfr13I	GGNCC	4 cut(s)	334, 1538, 2041, 2042
ClaI	ATCGAT	1 cut(s)	1448
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	1 cut(s)	533
CviAII	CATG	8 cut(s)	530, 736, 1246, 1338, 1751, 2012, 2038, 2050
CviQI	GTAC	1 cut(s)	533
DdeI	CTNAG	7 cut(s)	275, 312, 399, 480, 780, 852, 1361
DpnI	GATC	5 cut(s)	62, 1038, 1261, 1632, 1783
DpnII	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
Eam1104I	CTCTTC	2 cut(s)	1904, 2156
EarI	CTCTTC	2 cut(s)	1904, 2156
EciI	GGCGGA	2 cut(s)	29, 50
Ecl136II	GAGCTC	1 cut(s)	343
Eco130I	CCWWGG	4 cut(s)	634, 1245, 1726, 2037
Eco24I	GRGCYC	3 cut(s)	199, 345, 2045
Eco32I	GATATC	1 cut(s)	1816
Eco47I	GGWCC	1 cut(s)	1538
Eco47III	AGCGCT	1 cut(s)	1458
Eco53kI	GAGCTC	1 cut(s)	343
Eco88I	CYCGRG	1 cut(s)	203
EcoICRI	GAGCTC	1 cut(s)	343
EcoO109I	RGGNCCY	1 cut(s)	334
EcoRII	CCWGG	5 cut(s)	42, 81, 191, 336, 2101
EcoRV	GATATC	1 cut(s)	1816
EcoT14I	CCWWGG	4 cut(s)	634, 1245, 1726, 2037
EcoT22I	ATGCAT	1 cut(s)	1496
EcoT38I	GRGCYC	3 cut(s)	199, 345, 2045
ErhI	CCWWGG	4 cut(s)	634, 1245, 1726, 2037
Esp3I	CGTCTC	2 cut(s)	146, 1486
FaeI	CATG	8 cut(s)	533, 739, 1249, 1341, 1754, 2015, 2041, 2053
FalI	AAGNNNNNCTT	2 cut(s)	1113, 1145
FatI	CATG	8 cut(s)	529, 735, 1245, 1337, 1750, 2011, 2037, 2049
FauNDI	CATATG	1 cut(s)	1490
FokI	GGATG	6 cut(s)	218, 470, 566, 1204, 1771, 1934
FriOI	GRGCYC	3 cut(s)	199, 345, 2045
FspBI	CTAG	6 cut(s)	351, 881, 909, 977, 1688, 2123
GlaI	GCGC	8 cut(s)	209, 211, 213, 309, 475, 953, 1458, 1746
GsuI	CTGGAG	1 cut(s)	359
HaeII	RGCGCY	2 cut(s)	1460, 1748
HaeIII	GGCC	3 cut(s)	335, 2043, 2085
HapII	CCGG	1 cut(s)	494
HgaI	GACGC	1 cut(s)	14
HhaI	GCGC	8 cut(s)	210, 212, 214, 310, 476, 954, 1459, 1747
Hin1I	GRCGYC	1 cut(s)	1998
Hin1II	CATG	8 cut(s)	533, 739, 1249, 1341, 1754, 2015, 2041, 2053
Hin6I	GCGC	8 cut(s)	208, 210, 212, 308, 474, 952, 1457, 1745
HinP1I	GCGC	8 cut(s)	208, 210, 212, 308, 474, 952, 1457, 1745
HincII	GTYRAC	3 cut(s)	184, 777, 1254
HindII	GTYRAC	3 cut(s)	184, 777, 1254
HindIII	AAGCTT	3 cut(s)	968, 1136, 1805
HinfI	GANTC	7 cut(s)	147, 805, 1057, 1502, 1508, 1559, 2075
HpaII	CCGG	1 cut(s)	494
HphI	GGTGA	6 cut(s)	191, 382, 602, 1511, 1883, 1955
Hpy166II	GTNNAC	4 cut(s)	184, 777, 1254, 1546
Hpy188III	TCNNGA	7 cut(s)	494, 1104, 1121, 1577, 1862, 2012, 2072
Hpy8I	GTNNAC	4 cut(s)	184, 777, 1254, 1546
Hpy99I	CGWCG	3 cut(s)	107, 128, 299
HpyAV	CCTTC	6 cut(s)	11, 246, 617, 733, 1706, 1870
HpyCH4III	ACNGT	5 cut(s)	774, 861, 1713, 1723, 1987
HpyCH4IV	ACGT	4 cut(s)	105, 180, 1998, 2155
HpyF3I	CTNAG	7 cut(s)	275, 312, 399, 480, 780, 852, 1361
HpySE526I	ACGT	4 cut(s)	105, 180, 1998, 2155
Hsp92I	GRCGYC	1 cut(s)	1998
Hsp92II	CATG	8 cut(s)	533, 739, 1249, 1341, 1754, 2015, 2041, 2053
HspAI	GCGC	8 cut(s)	208, 210, 212, 308, 474, 952, 1457, 1745
Kpn2I	TCCGGA	1 cut(s)	493
Kzo9I	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
LmnI	GCTCC	6 cut(s)	46, 222, 330, 340, 1126, 1218
Lsp1109I	GCAGC	9 cut(s)	226, 513, 648, 718, 772, 1186, 1415, 1462, 1734
LweI	GCATC	8 cut(s)	448, 718, 772, 781, 1356, 1440, 1912, 1936
MaeI	CTAG	6 cut(s)	351, 881, 909, 977, 1688, 2123
MaeII	ACGT	4 cut(s)	105, 180, 1998, 2155
MaeIII	GTNAC	2 cut(s)	284, 689
MalI	GATC	5 cut(s)	62, 1038, 1261, 1632, 1783
MbiI	CCGCTC	1 cut(s)	54
MboI	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
MboII	GAAGA	8 cut(s)	637, 671, 763, 1312, 1921, 1947, 2163, 2173
MflI	RGATCY	1 cut(s)	1630
MhlI	GDGCHC	5 cut(s)	199, 327, 345, 1839, 2045
MluCI	AATT	8 cut(s)	785, 1072, 1168, 1265, 1303, 1773, 1977, 2006
MlyI	GAGTC	2 cut(s)	814, 1066
MmeI	TCCRAC	2 cut(s)	1346, 1549
Mph1103I	ATGCAT	1 cut(s)	1496
MroI	TCCGGA	1 cut(s)	493
MseI	TTAA	4 cut(s)	797, 1077, 1208, 1989
MslI	CAYNNNNRTG	3 cut(s)	1190, 1355, 1828
MspA1I	CMGCKG	1 cut(s)	403
MspI	CCGG	1 cut(s)	494
MspR9I	CCNGG	5 cut(s)	44, 83, 193, 338, 2103
Mva1269I	GAATGC	2 cut(s)	415, 706
MvaI	CCWGG	5 cut(s)	44, 83, 193, 338, 2103
MvnI	CGCG	3 cut(s)	8, 210, 212
NcoI	CCATGG	2 cut(s)	1245, 2037
NdeI	CATATG	1 cut(s)	1490
NdeII	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
NheI	GCTAGC	3 cut(s)	350, 880, 976
NlaIII	CATG	8 cut(s)	533, 739, 1249, 1341, 1754, 2015, 2041, 2053
NlaIV	GGNNCC	3 cut(s)	927, 1694, 2043
NmuCI	GTSAC	1 cut(s)	689
NsiI	ATGCAT	1 cut(s)	1496
NspI	RCATGY	2 cut(s)	533, 1341
NspV	TTCGAA	1 cut(s)	682
PaeR7I	CTCGAG	1 cut(s)	203
PagI	TCATGA	1 cut(s)	2011
PauI	GCGCGC	2 cut(s)	208, 210
PciI	ACATGT	1 cut(s)	1337
PctI	GAATGC	2 cut(s)	415, 706
PfeI	GAWTC	5 cut(s)	147, 1502, 1508, 1559, 2075
PflMI	CCANNNNNTGG	1 cut(s)	2102
PleI	GAGTC	2 cut(s)	813, 1065
PpsI	GAGTC	2 cut(s)	813, 1065
PscI	ACATGT	1 cut(s)	1337
Psp124BI	GAGCTC	1 cut(s)	345
Psp6I	CCWGG	5 cut(s)	42, 81, 191, 336, 2101
PspGI	CCWGG	5 cut(s)	42, 81, 191, 336, 2101
PspN4I	GGNNCC	3 cut(s)	927, 1694, 2043
PspOMI	GGGCCC	1 cut(s)	2041
PspPI	GGNCC	4 cut(s)	334, 1538, 2041, 2042
PspXI	VCTCGAGB	1 cut(s)	203
PstNI	CAGNNNCTG	2 cut(s)	766, 2078
PsuI	RGATCY	1 cut(s)	1630
PteI	GCGCGC	2 cut(s)	208, 210
PvuII	CAGCTG	1 cut(s)	403
RsaI	GTAC	1 cut(s)	534
RsaNI	GTAC	1 cut(s)	533
RseI	CAYNNNNRTG	3 cut(s)	1190, 1355, 1828
SacI	GAGCTC	1 cut(s)	345
SaqAI	TTAA	4 cut(s)	797, 1077, 1208, 1989
Sau3AI	GATC	5 cut(s)	60, 1036, 1259, 1630, 1781
Sau96I	GGNCC	4 cut(s)	334, 1538, 2041, 2042
SchI	GAGTC	2 cut(s)	814, 1066
ScrFI	CCNGG	5 cut(s)	44, 83, 193, 338, 2103
SduI	GDGCHC	5 cut(s)	199, 327, 345, 1839, 2045
SfaNI	GCATC	8 cut(s)	448, 718, 772, 781, 1356, 1440, 1912, 1936
SfcI	CTRYAG	1 cut(s)	1634
Sfr274I	CTCGAG	1 cut(s)	203
SfuI	TTCGAA	1 cut(s)	682
SinI	GGWCC	1 cut(s)	1538
SlaI	CTCGAG	1 cut(s)	203
SmiMI	CAYNNNNRTG	3 cut(s)	1190, 1355, 1828
SmlI	CTYRAG	3 cut(s)	164, 203, 971
SmoI	CTYRAG	3 cut(s)	164, 203, 971
Sse9I	AATT	8 cut(s)	785, 1072, 1168, 1265, 1303, 1773, 1977, 2006
SsiI	CCGC	7 cut(s)	8, 14, 35, 54, 354, 449, 2055
SspMI	CTAG	6 cut(s)	351, 881, 909, 977, 1688, 2123
SstI	GAGCTC	1 cut(s)	345
StyD4I	CCNGG	5 cut(s)	42, 81, 191, 336, 2101
StyI	CCWWGG	4 cut(s)	634, 1245, 1726, 2037
TaaI	ACNGT	5 cut(s)	774, 861, 1713, 1723, 1987
TaiI	ACGT	4 cut(s)	108, 183, 2001, 2158
TaqI	TCGA	6 cut(s)	126, 204, 246, 443, 682, 1448
TasI	AATT	8 cut(s)	785, 1072, 1168, 1265, 1303, 1773, 1977, 2006
TatI	WGTACW	1 cut(s)	532
TauI	GCSGC	2 cut(s)	57, 452
TfiI	GAWTC	5 cut(s)	147, 1502, 1508, 1559, 2075
Tru1I	TTAA	4 cut(s)	797, 1077, 1208, 1989
Tru9I	TTAA	4 cut(s)	797, 1077, 1208, 1989
TscAI	CASTG	6 cut(s)	287, 352, 551, 961, 1762, 1888
TseFI	GTSAC	1 cut(s)	689
TseI	GCWGC	9 cut(s)	214, 526, 661, 731, 760, 1174, 1403, 1475, 1747
Tsp45I	GTSAC	1 cut(s)	689
TspDTI	ATGAA	9 cut(s)	669, 752, 962, 1313, 1400, 1405, 1551, 1634, 2000
TspRI	CASTG	6 cut(s)	287, 352, 551, 961, 1762, 1888
Van91I	CCANNNNNTGG	1 cut(s)	2102
VpaK11BI	GGWCC	1 cut(s)	1538
XapI	RAATTY	5 cut(s)	785, 1072, 1168, 1265, 1773
XceI	RCATGY	2 cut(s)	533, 1341
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XhoI	CTCGAG	1 cut(s)	203
XspI	CTAG	6 cut(s)	351, 881, 909, 977, 1688, 2123
ZraI	GACGTC	1 cut(s)	1999
Zsp2I	ATGCAT	1 cut(s)	1496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.