DNA-damage-repair toleration protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20820 AT5G12940 |
| fragaria_vesca | FvH4_3g43270 |
| malus_domestica | MD03G1023300.v1.1 MD11G1028200.v1.1 |
| prunus_persica | Prupe.6G022400_v2.0.a1 |
| pyrus_communis | pycom03g01990 pycom11g02190 |
| rosa_chinensis | RchiOBHm_Chr5g0077331 |
| rosa_laevigata | RLG00000036686 |
| rosa_multiflora | Rmu_sc0000433.1_g000028 |
| rosa_roxburghii | Rroxscaffold_1G00004580 |
| rosa_rugosa | Rorug05G0453800 |
| rosa_samantha | Rh5AG509000 Rh5BG530300 Rh5CG554700 Rh5DG542600 |
| rosa_wichuraiana | Rw5G046840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 949 |
| Acc65I | GGTACC | 2 cut(s) | 281, 500 |
| AccB1I | GGYRCC | 3 cut(s) | 149, 281, 500 |
| AccI | GTMKAC | 1 cut(s) | 941 |
| AccII | CGCG | 1 cut(s) | 615 |
| AccIII | TCCGGA | 1 cut(s) | 393 |
| AciI | CCGC | 9 cut(s) | 26, 68, 83, 199, 304, 451, 553, 581, 613 |
| AclWI | GGATC | 2 cut(s) | 391, 404 |
| AcoI | YGGCCR | 3 cut(s) | 294, 448, 744 |
| AfaI | GTAC | 6 cut(s) | 30, 43, 173, 283, 502, 914 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AflII | CTTAAG | 1 cut(s) | 835 |
| AflIII | ACRYGT | 1 cut(s) | 870 |
| AgeI | ACCGGT | 1 cut(s) | 278 |
| AgsI | TTSAA | 6 cut(s) | 100, 136, 592, 832, 1037, 1057 |
| AhlI | ACTAGT | 1 cut(s) | 44 |
| AjnI | CCWGG | 1 cut(s) | 189 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 371, 403 |
| AluBI | AGCT | 3 cut(s) | 183, 421, 1088 |
| AluI | AGCT | 3 cut(s) | 183, 421, 1088 |
| Alw26I | GTCTC | 2 cut(s) | 519, 683 |
| AlwI | GGATC | 2 cut(s) | 391, 404 |
| Ama87I | CYCGRG | 2 cut(s) | 509, 799 |
| Aor13HI | TCCGGA | 1 cut(s) | 393 |
| AoxI | GGCC | 6 cut(s) | 51, 84, 294, 448, 726, 744 |
| ApeKI | GCWGC | 2 cut(s) | 159, 183 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 230, 262, 515, 547, 661, 693, 732, 764 |
| AsiGI | ACCGGT | 1 cut(s) | 278 |
| Asp718I | GGTACC | 2 cut(s) | 281, 500 |
| AspLEI | GCGC | 2 cut(s) | 462, 617 |
| AspS9I | GGNCC | 7 cut(s) | 51, 85, 238, 428, 644, 716, 878 |
| AsuC2I | CCSGG | 2 cut(s) | 80, 367 |
| AsuHPI | GGTGA | 5 cut(s) | 319, 415, 457, 775, 1011 |
| AsuII | TTCGAA | 1 cut(s) | 249 |
| AvaI | CYCGRG | 2 cut(s) | 509, 799 |
| AvaII | GGWCC | 5 cut(s) | 238, 428, 644, 716, 878 |
| BamHI | GGATCC | 1 cut(s) | 396 |
| BanI | GGYRCC | 3 cut(s) | 149, 281, 500 |
| BanII | GRGCYC | 1 cut(s) | 120 |
| BauI | CACGAG | 1 cut(s) | 113 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| BbvI | GCAGC | 2 cut(s) | 146, 170 |
| BccI | CCATC | 8 cut(s) | 79, 293, 305, 338, 512, 656, 953, 999 |
| BceAI | ACGGC | 3 cut(s) | 38, 186, 731 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 313, 347 |
| BciT130I | CCWGG | 1 cut(s) | 191 |
| BcnI | CCSGG | 2 cut(s) | 80, 367 |
| BcoDI | GTCTC | 2 cut(s) | 519, 683 |
| BcuI | ACTAGT | 1 cut(s) | 44 |
| BfaI | CTAG | 4 cut(s) | 39, 45, 734, 767 |
| BfoI | RGCGCY | 1 cut(s) | 463 |
| BfrI | CTTAAG | 1 cut(s) | 835 |
| BglII | AGATCT | 2 cut(s) | 525, 884 |
| BisI | GCNGC | 7 cut(s) | 84, 160, 184, 304, 451, 581, 613 |
| BlpI | GCTNAGC | 2 cut(s) | 608, 623 |
| BlsI | GCNGC | 7 cut(s) | 85, 161, 185, 305, 452, 582, 614 |
| BmcAI | AGTACT | 1 cut(s) | 43 |
| Bme1390I | CCNGG | 3 cut(s) | 80, 191, 367 |
| Bme18I | GGWCC | 5 cut(s) | 238, 428, 644, 716, 878 |
| BmeT110I | CYCGRG | 2 cut(s) | 509, 799 |
| BmgT120I | GGNCC | 7 cut(s) | 51, 85, 238, 428, 644, 716, 878 |
| BmiI | GGNNCC | 8 cut(s) | 151, 196, 240, 283, 398, 502, 646, 718 |
| BmrFI | CCNGG | 3 cut(s) | 80, 191, 367 |
| BmsI | GCATC | 4 cut(s) | 138, 333, 357, 1049 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| BpmI | CTGGAG | 2 cut(s) | 304, 440 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 608, 623 |
| Bpu14I | TTCGAA | 1 cut(s) | 249 |
| BpuMI | CCSGG | 2 cut(s) | 80, 367 |
| BsaBI | GATNNNNATC | 1 cut(s) | 690 |
| BsaJI | CCNNGG | 5 cut(s) | 190, 223, 234, 365, 853 |
| BsaWI | WCCGGW | 7 cut(s) | 278, 393, 425, 569, 713, 785, 1009 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 375, 405, 695, 725 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| Bse118I | RCCGGY | 2 cut(s) | 278, 292 |
| Bse1I | ACTGG | 4 cut(s) | 151, 271, 344, 646 |
| Bse8I | GATNNNNATC | 1 cut(s) | 690 |
| BseAI | TCCGGA | 1 cut(s) | 393 |
| BseBI | CCWGG | 1 cut(s) | 191 |
| BseDI | CCNNGG | 5 cut(s) | 190, 223, 234, 365, 853 |
| BseGI | GGATG | 2 cut(s) | 504, 648 |
| BseJI | GATNNNNATC | 1 cut(s) | 690 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 3 cut(s) | 510, 622, 637 |
| BseNI | ACTGG | 4 cut(s) | 151, 271, 344, 646 |
| BseX3I | CGGCCG | 1 cut(s) | 448 |
| BseXI | GCAGC | 2 cut(s) | 146, 170 |
| Bsh1236I | CGCG | 1 cut(s) | 615 |
| Bsh1285I | CGRYCG | 2 cut(s) | 451, 1014 |
| BshFI | GGCC | 6 cut(s) | 53, 86, 296, 450, 728, 746 |
| BshNI | GGYRCC | 3 cut(s) | 149, 281, 500 |
| BshTI | ACCGGT | 1 cut(s) | 278 |
| BsiEI | CGRYCG | 2 cut(s) | 451, 1014 |
| BsiHKCI | CYCGRG | 2 cut(s) | 509, 799 |
| BslFI | GGGAC | 3 cut(s) | 517, 630, 702 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BsmAI | GTCTC | 2 cut(s) | 519, 683 |
| BsmBI | CGTCTC | 1 cut(s) | 683 |
| BsmFI | GGGAC | 3 cut(s) | 517, 630, 702 |
| BsnI | GGCC | 6 cut(s) | 53, 86, 296, 450, 728, 746 |
| BsoBI | CYCGRG | 2 cut(s) | 509, 799 |
| Bsp119I | TTCGAA | 1 cut(s) | 249 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| Bsp13I | TCCGGA | 1 cut(s) | 393 |
| Bsp143I | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 608, 623 |
| Bsp19I | CCATGG | 1 cut(s) | 853 |
| BspACI | CCGC | 9 cut(s) | 26, 68, 83, 199, 304, 451, 553, 581, 613 |
| BspANI | GGCC | 6 cut(s) | 53, 86, 296, 450, 728, 746 |
| BspCNI | CTCAG | 3 cut(s) | 509, 621, 636 |
| BspEI | TCCGGA | 1 cut(s) | 393 |
| BspFNI | CGCG | 1 cut(s) | 615 |
| BspLI | GGNNCC | 8 cut(s) | 151, 196, 240, 283, 398, 502, 646, 718 |
| BspPI | GGATC | 2 cut(s) | 391, 404 |
| BspT104I | TTCGAA | 1 cut(s) | 249 |
| BspT107I | GGYRCC | 3 cut(s) | 149, 281, 500 |
| BspTI | CTTAAG | 1 cut(s) | 835 |
| BsrFI | RCCGGY | 2 cut(s) | 278, 292 |
| BsrI | ACTGG | 4 cut(s) | 151, 271, 344, 646 |
| BssAI | RCCGGY | 2 cut(s) | 278, 292 |
| BssECI | CCNNGG | 5 cut(s) | 190, 223, 234, 365, 853 |
| BssMI | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| BssSI | CACGAG | 1 cut(s) | 113 |
| BssT1I | CCWWGG | 1 cut(s) | 853 |
| Bst2BI | CACGAG | 1 cut(s) | 113 |
| Bst2UI | CCWGG | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 6 cut(s) | 176, 469, 677, 773, 898, 1023 |
| BstAFI | CTTAAG | 1 cut(s) | 835 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 156 |
| BstBI | TTCGAA | 1 cut(s) | 249 |
| BstC8I | GCNNGC | 5 cut(s) | 60, 93, 106, 294, 1090 |
| BstDEI | CTNAG | 5 cut(s) | 124, 496, 608, 623, 1082 |
| BstDSI | CCRYGG | 2 cut(s) | 223, 853 |
| BstF5I | GGATG | 2 cut(s) | 504, 648 |
| BstFNI | CGCG | 1 cut(s) | 615 |
| BstH2I | RGCGCY | 1 cut(s) | 463 |
| BstHHI | GCGC | 2 cut(s) | 462, 617 |
| BstKTI | GATC | 5 cut(s) | 399, 528, 688, 694, 887 |
| BstMAI | GTCTC | 2 cut(s) | 519, 683 |
| BstMBI | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| BstMCI | CGRYCG | 2 cut(s) | 451, 1014 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 59, 92, 101, 156, 312, 321, 354, 459, 752 |
| BstNI | CCWGG | 1 cut(s) | 191 |
| BstNSI | RCATGY | 2 cut(s) | 66, 637 |
| BstSCI | CCNGG | 3 cut(s) | 78, 189, 365 |
| BstUI | CGCG | 1 cut(s) | 615 |
| BstV1I | GCAGC | 2 cut(s) | 146, 170 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstX2I | RGATCY | 3 cut(s) | 396, 525, 884 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 998 |
| BstYI | RGATCY | 3 cut(s) | 396, 525, 884 |
| BstZI | CGGCCG | 1 cut(s) | 448 |
| BsuRI | GGCC | 6 cut(s) | 53, 86, 296, 450, 728, 746 |
| BtgI | CCRYGG | 2 cut(s) | 223, 853 |
| BtgZI | GCGATG | 1 cut(s) | 316 |
| BtsCI | GGATG | 2 cut(s) | 504, 648 |
| BtsIMutI | CAGTG | 2 cut(s) | 639, 894 |
| Cac8I | GCNNGC | 5 cut(s) | 60, 93, 106, 294, 1090 |
| CfoI | GCGC | 2 cut(s) | 462, 617 |
| Cfr10I | RCCGGY | 2 cut(s) | 278, 292 |
| Cfr13I | GGNCC | 7 cut(s) | 51, 85, 238, 428, 644, 716, 878 |
| Csp6I | GTAC | 6 cut(s) | 29, 42, 172, 282, 501, 913 |
| CspAI | ACCGGT | 1 cut(s) | 278 |
| CviAII | CATG | 6 cut(s) | 63, 141, 274, 538, 634, 854 |
| CviQI | GTAC | 6 cut(s) | 29, 42, 172, 282, 501, 913 |
| DdeI | CTNAG | 5 cut(s) | 124, 496, 608, 623, 1082 |
| DpnI | GATC | 5 cut(s) | 398, 527, 687, 693, 886 |
| DpnII | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 949 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 949 |
| EaeI | YGGCCR | 3 cut(s) | 294, 448, 744 |
| EagI | CGGCCG | 1 cut(s) | 448 |
| EciI | GGCGGA | 1 cut(s) | 57 |
| EclXI | CGGCCG | 1 cut(s) | 448 |
| Eco130I | CCWWGG | 1 cut(s) | 853 |
| Eco24I | GRGCYC | 1 cut(s) | 120 |
| Eco47I | GGWCC | 5 cut(s) | 238, 428, 644, 716, 878 |
| Eco52I | CGGCCG | 1 cut(s) | 448 |
| Eco88I | CYCGRG | 2 cut(s) | 509, 799 |
| EcoO109I | RGGNCCY | 1 cut(s) | 238 |
| EcoRII | CCWGG | 1 cut(s) | 189 |
| EcoT14I | CCWWGG | 1 cut(s) | 853 |
| EcoT38I | GRGCYC | 1 cut(s) | 120 |
| ErhI | CCWWGG | 1 cut(s) | 853 |
| Esp3I | CGTCTC | 1 cut(s) | 683 |
| FaeI | CATG | 6 cut(s) | 66, 144, 277, 541, 637, 857 |
| FaqI | GGGAC | 3 cut(s) | 517, 630, 702 |
| FatI | CATG | 6 cut(s) | 62, 140, 273, 537, 633, 853 |
| FauI | CCCGC | 1 cut(s) | 206 |
| FblI | GTMKAC | 1 cut(s) | 941 |
| Fnu4HI | GCNGC | 7 cut(s) | 84, 160, 184, 304, 451, 581, 613 |
| FokI | GGATG | 2 cut(s) | 491, 635 |
| FriOI | GRGCYC | 1 cut(s) | 120 |
| Fsp4HI | GCNGC | 7 cut(s) | 84, 160, 184, 304, 451, 581, 613 |
| FspBI | CTAG | 4 cut(s) | 39, 45, 734, 767 |
| GlaI | GCGC | 2 cut(s) | 461, 616 |
| GluI | GCNGC | 7 cut(s) | 84, 160, 184, 304, 451, 581, 613 |
| GsuI | CTGGAG | 2 cut(s) | 304, 440 |
| HaeII | RGCGCY | 1 cut(s) | 463 |
| HaeIII | GGCC | 6 cut(s) | 53, 86, 296, 450, 728, 746 |
| HhaI | GCGC | 2 cut(s) | 462, 617 |
| Hin1II | CATG | 6 cut(s) | 66, 144, 277, 541, 637, 857 |
| Hin6I | GCGC | 2 cut(s) | 460, 615 |
| HinP1I | GCGC | 2 cut(s) | 460, 615 |
| HincII | GTYRAC | 1 cut(s) | 942 |
| HindII | GTYRAC | 1 cut(s) | 942 |
| HinfI | GANTC | 4 cut(s) | 230, 361, 512, 1006 |
| HphI | GGTGA | 5 cut(s) | 319, 415, 457, 775, 1011 |
| Hpy166II | GTNNAC | 3 cut(s) | 942, 1019, 1050 |
| Hpy188I | TCNGA | 5 cut(s) | 76, 235, 413, 442, 882 |
| Hpy188III | TCNNGA | 2 cut(s) | 394, 689 |
| Hpy8I | GTNNAC | 3 cut(s) | 942, 1019, 1050 |
| Hpy99I | CGWCG | 5 cut(s) | 482, 943, 955, 968, 1048 |
| HpyAV | CCTTC | 2 cut(s) | 337, 447 |
| HpyCH4III | ACNGT | 6 cut(s) | 176, 469, 677, 773, 898, 1023 |
| HpyCH4IV | ACGT | 3 cut(s) | 253, 477, 870 |
| HpyCH4V | TGCA | 1 cut(s) | 541 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 59, 92, 101, 156, 312, 321, 354, 459, 752 |
| HpyF3I | CTNAG | 5 cut(s) | 124, 496, 608, 623, 1082 |
| HpySE526I | ACGT | 3 cut(s) | 253, 477, 870 |
| Hsp92II | CATG | 6 cut(s) | 66, 144, 277, 541, 637, 857 |
| HspAI | GCGC | 2 cut(s) | 460, 615 |
| Kpn2I | TCCGGA | 1 cut(s) | 393 |
| KpnI | GGTACC | 2 cut(s) | 285, 504 |
| KroI | GCCGGC | 1 cut(s) | 292 |
| KroNI | GCCGGC | 1 cut(s) | 294 |
| Kzo9I | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| Lsp1109I | GCAGC | 2 cut(s) | 146, 170 |
| LweI | GCATC | 4 cut(s) | 138, 333, 357, 1049 |
| MaeI | CTAG | 4 cut(s) | 39, 45, 734, 767 |
| MaeII | ACGT | 3 cut(s) | 253, 477, 870 |
| MaeIII | GTNAC | 2 cut(s) | 773, 968 |
| MalI | GATC | 5 cut(s) | 398, 527, 687, 693, 886 |
| MboI | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| MboII | GAAGA | 4 cut(s) | 16, 124, 535, 1015 |
| MflI | RGATCY | 3 cut(s) | 396, 525, 884 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MlyI | GAGTC | 1 cut(s) | 521 |
| MmeI | TCCRAC | 1 cut(s) | 402 |
| MroI | TCCGGA | 1 cut(s) | 393 |
| MroNI | GCCGGC | 1 cut(s) | 292 |
| MseI | TTAA | 2 cut(s) | 702, 836 |
| MslI | CAYNNNNRTG | 1 cut(s) | 996 |
| MspA1I | CMGCKG | 1 cut(s) | 183 |
| MspCI | CTTAAG | 1 cut(s) | 835 |
| MspR9I | CCNGG | 3 cut(s) | 80, 191, 367 |
| MvaI | CCWGG | 1 cut(s) | 191 |
| MvnI | CGCG | 1 cut(s) | 615 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 59, 92, 101, 156, 312, 321, 354, 459, 752 |
| NaeI | GCCGGC | 1 cut(s) | 294 |
| NciI | CCSGG | 2 cut(s) | 80, 367 |
| NcoI | CCATGG | 1 cut(s) | 853 |
| NdeII | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| NgoMIV | GCCGGC | 1 cut(s) | 292 |
| NlaIII | CATG | 6 cut(s) | 66, 144, 277, 541, 637, 857 |
| NlaIV | GGNNCC | 8 cut(s) | 151, 196, 240, 283, 398, 502, 646, 718 |
| NmuCI | GTSAC | 1 cut(s) | 968 |
| NspI | RCATGY | 2 cut(s) | 66, 637 |
| NspV | TTCGAA | 1 cut(s) | 249 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 527, 947, 956 |
| PdiI | GCCGGC | 1 cut(s) | 294 |
| PfeI | GAWTC | 3 cut(s) | 230, 361, 1006 |
| PinAI | ACCGGT | 1 cut(s) | 278 |
| PkrI | GCNGC | 7 cut(s) | 85, 161, 185, 305, 452, 582, 614 |
| PleI | GAGTC | 1 cut(s) | 520 |
| PpsI | GAGTC | 1 cut(s) | 520 |
| PpuMI | RGGWCCY | 1 cut(s) | 238 |
| Psp5II | RGGWCCY | 1 cut(s) | 238 |
| Psp6I | CCWGG | 1 cut(s) | 189 |
| PspGI | CCWGG | 1 cut(s) | 189 |
| PspN4I | GGNNCC | 8 cut(s) | 151, 196, 240, 283, 398, 502, 646, 718 |
| PspPI | GGNCC | 7 cut(s) | 51, 85, 238, 428, 644, 716, 878 |
| PspPPI | RGGWCCY | 1 cut(s) | 238 |
| PsuI | RGATCY | 3 cut(s) | 396, 525, 884 |
| PvuII | CAGCTG | 1 cut(s) | 183 |
| RsaI | GTAC | 6 cut(s) | 30, 43, 173, 283, 502, 914 |
| RsaNI | GTAC | 6 cut(s) | 29, 42, 172, 282, 501, 913 |
| RseI | CAYNNNNRTG | 1 cut(s) | 996 |
| SalI | GTCGAC | 1 cut(s) | 940 |
| SaqAI | TTAA | 2 cut(s) | 702, 836 |
| SatI | GCNGC | 7 cut(s) | 84, 160, 184, 304, 451, 581, 613 |
| Sau3AI | GATC | 5 cut(s) | 396, 525, 685, 691, 884 |
| Sau96I | GGNCC | 7 cut(s) | 51, 85, 238, 428, 644, 716, 878 |
| ScaI | AGTACT | 1 cut(s) | 43 |
| SchI | GAGTC | 1 cut(s) | 521 |
| ScrFI | CCNGG | 3 cut(s) | 80, 191, 367 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SfaNI | GCATC | 4 cut(s) | 138, 333, 357, 1049 |
| SfuI | TTCGAA | 1 cut(s) | 249 |
| SinI | GGWCC | 5 cut(s) | 238, 428, 644, 716, 878 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 996 |
| SmlI | CTYRAG | 1 cut(s) | 835 |
| SmoI | CTYRAG | 1 cut(s) | 835 |
| SpeI | ACTAGT | 1 cut(s) | 44 |
| SsiI | CCGC | 9 cut(s) | 26, 68, 83, 199, 304, 451, 553, 581, 613 |
| SspI | AATATT | 1 cut(s) | 934 |
| SspMI | CTAG | 4 cut(s) | 39, 45, 734, 767 |
| StyD4I | CCNGG | 3 cut(s) | 78, 189, 365 |
| StyI | CCWWGG | 1 cut(s) | 853 |
| TaaI | ACNGT | 6 cut(s) | 176, 469, 677, 773, 898, 1023 |
| TaiI | ACGT | 3 cut(s) | 256, 480, 873 |
| TaqI | TCGA | 4 cut(s) | 249, 546, 941, 1026 |
| TaqII | GACCGA | 1 cut(s) | 956 |
| TatI | WGTACW | 1 cut(s) | 41 |
| TauI | GCSGC | 5 cut(s) | 86, 306, 453, 583, 615 |
| TfiI | GAWTC | 3 cut(s) | 230, 361, 1006 |
| Tru1I | TTAA | 2 cut(s) | 702, 836 |
| Tru9I | TTAA | 2 cut(s) | 702, 836 |
| TscAI | CASTG | 2 cut(s) | 646, 901 |
| TseFI | GTSAC | 1 cut(s) | 968 |
| TseI | GCWGC | 2 cut(s) | 159, 183 |
| Tsp45I | GTSAC | 1 cut(s) | 968 |
| TspDTI | ATGAA | 2 cut(s) | 17, 850 |
| TspGWI | ACGGA | 2 cut(s) | 212, 927 |
| TspRI | CASTG | 2 cut(s) | 646, 901 |
| Vha464I | CTTAAG | 1 cut(s) | 835 |
| VpaK11BI | GGWCC | 5 cut(s) | 238, 428, 644, 716, 878 |
| XceI | RCATGY | 2 cut(s) | 66, 637 |
| XmiI | GTMKAC | 1 cut(s) | 941 |
| XspI | CTAG | 4 cut(s) | 39, 45, 734, 767 |
| ZrmI | AGTACT | 1 cut(s) | 43 |