Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0012849

Physical Location & Seq

Genomic Coordinates Reverse (-)

62726382 .. 62738512

Gene Structure 12131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0453800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGACAATGCGAATGCTAGTTCATCATCATATATTGGTATTCACTTTGGTGTTGTCCTTTACAGCAGAAGCATCAGATGATCAGTTGGCACCCTTGCCGATAGGAAAACCTGGGTGCAGAACAAATTGCAGCGGTGTTTCGATTCAATACCCTTTCGGAATTGGCCAATCCGGCGGTGAAGATTGCTTTTACGACGTGTGGTTCCAAATCGACTGCAACCAGTCCACCAGGTGGAAGCCCGTCCTGAGGCACACCCAAATGGAGATAGGGAACATTACCATTGCTGAAAATGCAGACAGGGTTCAGGTGTACAGCCCCGTTACTTCCTTGTGCCCCAATACTGAAGCAAAGCAACCAAGAGATTTCACGGGCAGCCCTTTCGTCTACTCTCAGAAATTCAATAGATTTACTGCAGTGAGTTGCGGCTTCCTTGCCGTCATTAGCTCCGATGAGTTAATCGTCGGTGGGTGCAGGTCAAGATGTCAAGAGAACGGCTACAGCGTTGACACGCCCTGTGACACTGGTAATAACTGCTGCCAAACTACTATTCCTTCATCTCTCACAGTTATCAATGCTAGTATACAGAGGGATCCAAATGGAAGCGCACCTGGTGATGCTGGTTGCAAAGACCGGGCGTTTCTGGTTGACCAAGATTGGTTTACTGCTACAAGTTACTATGCCATTGAGAACATGAGCAGCGTTCCTGTGGTGCTGGAATGGACTTTAAACAACGATCAAGCTACTTCTTCATTTCAACCCTTTCAATCTTTCCTAGAAGATACCGAGTGGTATTTCACGGATCCAACACCCTTTTGCTCGATTGACCAATCCATAAGCAATCGAACAAGAACAACATTCAGTTGTTACTGCAGTTCTGGCTTCGAAGGAAATCCGTACCTTCTCGCGCCTTGTCGTGACATTGATGAATGCGCAATTCAGCCCAGTGTGTGCTCACCGGGCAGCAAGTGTGTGAACCATCCTGCAATGTATTATTGTGGGGCCGATAGCCATGTTGTGAAATGGGTCCTCTTAGGTGTCGGCGGGTGCGTTGGGATGTTATTATTACTTACTGGTGCATGGTTGGTATACAAATACCTTCAGAAAAGGAAAAACAAAATACGCAAGGAGTTGTTTTTCAAGAGAAATGGTGGTTTACTATTACAACAACAATTATCGTCCGGTGAAGTTAACGTTGAGAAGATTAAGTTGTTTACATCTGAGGAGTTGGAGAAGTCTACTGACAAATTCAATATTGATAGAATCCTTGGCCAGGGAGGCCAAGGTACTGTTTACAAAGGCATGCTAACAGATGGAAGGATCGTGGCTATTAAGAAGTCTAAAATGGTGAGCGAAGGCCAACTTTCGGATTTCATCAATGAGGTTGTCATTCTTTCTCAAATCAACCACAGAAATATCGTTCAGCTATTGGGTTGTTGTTTAGAGAATGAAGTTCCTCTTCTAGTATATGAGTTCATACCAAACGGAACTCTTTCCAAGTATATCCAAGGTCAGATTGAGGAATTTCCACTTACATGGAAAATACGGTTACGAATTGCAACTGAAATTGCAGGAGCACTTTTCTACCTACACTCTGCAGCTTCATGTCCCATTTTTCACAGAGACATCAAGTCCACAAACATACTTCTAGATGAAAAATACAGGGCAAAAGTAGCTGACTTTGGAACTTCAAGATCCGTTGGCATTGACCAAACCCACCTGACCACATGTGTACTTGGTACGTTTGGTTATATGGACCCAGAATACTTTCATTCAAGTCAATTTACAGAGAAAAGTGATGTTTATAGCTTCGGAGTTATCCTTGTTGAGCTTTTGACTGGACAAAAACCAGTTTCTGCTGTAACAAAATCACAAGAAGAATTCAGGAATCTTGCCTCACATTTTGTTACTTCAATGCAAGAAGATAGTCTGTGTGAAATTCTCGATGCTCGAGTTCTGAAAGAGGGTTCTGAAACAGATATTAAGGTTGTTGCTAACCTTGCAAAAAGATGTTTAAATGTTAATGGAAGAAATCGCCCTACAATGAGAGAGGTGACAGCAGAGTTGGAGTCCATCCATATCCATACGTTTGCAGAAAAAGCGTCAAATGCTGATCAACGAAGTAAATCCATTGATAGTTGGGATGGAAGTTCAATAGGAACTGGGATAGCTTCTGATAGGTTTGGTGATGATGAGATCGACTTCATCACTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0036094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8

Protein Analysis

737

Amino Acids

81.92

Weight (kDa)

5.41

Isoelectric Point (pI)

39.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	39 - 97	2.9e-08	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	417 - 685	1.1e-50	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	417 - 688	1.9e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20820 AT5G12940
fragaria_vesca	FvH4_3g43270
malus_domestica	MD03G1023300.v1.1 MD11G1028200.v1.1
prunus_persica	Prupe.6G022400_v2.0.a1
pyrus_communis	pycom03g01990 pycom11g02190
rosa_chinensis	RchiOBHm_Chr5g0077331
rosa_laevigata	RLG00000036686
rosa_multiflora	Rmu_sc0000433.1_g000028
rosa_roxburghii	Rroxscaffold_1G00004580
rosa_rugosa	Rorug05G0453800
rosa_samantha	Rh5AG509000 Rh5BG530300 Rh5CG554700 Rh5DG542600
rosa_wichuraiana	Rw5G046840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	931
Acc36I	ACCTGC	1 cut(s)	462
AccB1I	GGYRCC	1 cut(s)	88
AccB7I	CCANNNNNTGG	1 cut(s)	231
AccI	GTMKAC	4 cut(s)	384, 580, 1086, 1235
AccII	CGCG	1 cut(s)	905
AciI	CCGC	4 cut(s)	132, 174, 423, 1041
AclI	AACGTT	1 cut(s)	1191
AclWI	GGATC	6 cut(s)	584, 597, 794, 807, 1325, 1686
AcoI	YGGCCR	2 cut(s)	163, 1267
AcsI	RAATTY	5 cut(s)	395, 1244, 1520, 1877, 1935
AcuI	CTGAAG	2 cut(s)	363, 1082
AdeI	CACNNNGTG	2 cut(s)	231, 611
AfaI	GTAC	5 cut(s)	311, 896, 1285, 1731, 1738
AfiI	CCNNNNNNNGG	4 cut(s)	231, 246, 1270, 1363
AflIII	ACRYGT	2 cut(s)	195, 1724
AhdI	GACNNNNNGTC	1 cut(s)	1627
AjiI	CACGTC	1 cut(s)	196
AjnI	CCWGG	4 cut(s)	109, 227, 607, 1269
AjuI	GAANNNNNNNTTGG	2 cut(s)	531, 563
AleI	CACNNNNGTG	1 cut(s)	47
AluBI	AGCT	8 cut(s)	444, 740, 1423, 1598, 1673, 1806, 1828, 2168
AluI	AGCT	8 cut(s)	444, 740, 1423, 1598, 1673, 1806, 1828, 2168
Alw21I	GWGCWC	2 cut(s)	953, 1576
Alw26I	GTCTC	1 cut(s)	1614
AlwI	GGATC	6 cut(s)	584, 597, 794, 807, 1325, 1686
AlwNI	CAGNNNCTG	1 cut(s)	1853
Ama87I	CYCGRG	1 cut(s)	1947
AoxI	GGCC	5 cut(s)	163, 999, 1267, 1276, 1354
ApeKI	GCWGC	6 cut(s)	129, 372, 534, 696, 960, 1595
ApoI	RAATTY	5 cut(s)	395, 1244, 1520, 1877, 1935
Asp700I	GAANNNNTTC	2 cut(s)	1489, 1764
AspLEI	GCGC	3 cut(s)	605, 907, 932
AspS9I	GGNCC	3 cut(s)	999, 1024, 1753
AsuC2I	CCSGG	2 cut(s)	632, 957
AsuHPI	GGTGA	7 cut(s)	188, 623, 945, 1193, 1357, 2062, 2195
AsuII	TTCGAA	1 cut(s)	882
AvaI	CYCGRG	1 cut(s)	1947
AvaII	GGWCC	2 cut(s)	1024, 1753
AxyI	CCTNAGG	1 cut(s)	245
BaeGI	GKGCMC	1 cut(s)	335
BalI	TGGCCA	2 cut(s)	165, 1269
BamHI	GGATCC	2 cut(s)	589, 799
BanI	GGYRCC	1 cut(s)	88
Bbv12I	GWGCWC	2 cut(s)	953, 1576
BbvI	GCAGC	6 cut(s)	141, 384, 521, 708, 972, 1607
BccI	CCATC	4 cut(s)	984, 1304, 2078, 2135
BceAI	ACGGC	2 cut(s)	419, 508
BcgI	CGANNNNNNTGC	2 cut(s)	361, 395
BciT130I	CCWGG	4 cut(s)	111, 229, 609, 1271
BclI	TGATCA	2 cut(s)	79, 2110
BcnI	CCSGG	2 cut(s)	632, 957
BcoDI	GTCTC	1 cut(s)	1614
BfaI	CTAG	5 cut(s)	17, 576, 773, 1460, 1646
BfmI	CTRYAG	4 cut(s)	411, 496, 868, 1593
BfuAI	ACCTGC	1 cut(s)	462
BglI	GCCNNNNNGGC	2 cut(s)	171, 1275
BisI	GCNGC	7 cut(s)	130, 373, 424, 535, 697, 961, 1596
BlsI	GCNGC	7 cut(s)	131, 374, 425, 536, 698, 962, 1597
Bme1390I	CCNGG	6 cut(s)	111, 229, 609, 632, 957, 1271
Bme18I	GGWCC	2 cut(s)	1024, 1753
BmeRI	GACNNNNNGTC	1 cut(s)	1627
BmeT110I	CYCGRG	1 cut(s)	1947
BmgBI	CACGTC	1 cut(s)	196
BmgT120I	GGNCC	3 cut(s)	999, 1024, 1753
BmiI	GGNNCC	7 cut(s)	90, 203, 591, 801, 1000, 1025, 1755
BmrFI	CCNGG	6 cut(s)	111, 229, 609, 632, 957, 1271
BmrI	ACTGGG	2 cut(s)	936, 2169
BmsI	GCATC	3 cut(s)	80, 604, 1933
BmuI	ACTGGG	2 cut(s)	936, 2169
Bpu14I	TTCGAA	1 cut(s)	882
BpuMI	CCSGG	2 cut(s)	632, 957
BsaJI	CCNNGG	5 cut(s)	110, 1264, 1270, 1279, 1504
BsaWI	WCCGGW	1 cut(s)	1178
Bsc4I	CCNNNNNNNGG	4 cut(s)	231, 246, 1270, 1363
Bse1I	ACTGG	7 cut(s)	220, 526, 942, 1075, 1840, 1847, 2164
Bse21I	CCTNAGG	1 cut(s)	245
Bse3DI	GCAATG	2 cut(s)	279, 990
BseBI	CCWGG	4 cut(s)	111, 229, 609, 1271
BseDI	CCNNGG	5 cut(s)	110, 1264, 1270, 1279, 1504
BseGI	GGATG	4 cut(s)	976, 1059, 2070, 2146
BseLI	CCNNNNNNNGG	4 cut(s)	231, 246, 1270, 1363
BseMI	GCAATG	2 cut(s)	279, 990
BseMII	CTCAG	3 cut(s)	236, 404, 1209
BseNI	ACTGG	7 cut(s)	220, 526, 942, 1075, 1840, 1847, 2164
BseRI	GAGGAG	1 cut(s)	1235
BseSI	GKGCMC	1 cut(s)	335
BseXI	GCAGC	6 cut(s)	141, 384, 521, 708, 972, 1607
BsgI	GTGCAG	2 cut(s)	136, 490
Bsh1236I	CGCG	1 cut(s)	905
BshFI	GGCC	5 cut(s)	165, 1001, 1269, 1278, 1356
BshNI	GGYRCC	1 cut(s)	88
BsiHKAI	GWGCWC	2 cut(s)	953, 1576
BsiHKCI	CYCGRG	1 cut(s)	1947
BsiSI	CCGG	4 cut(s)	171, 631, 956, 1179
BslFI	GGGAC	1 cut(s)	1590
BslI	CCNNNNNNNGG	4 cut(s)	231, 246, 1270, 1363
BsmAI	GTCTC	1 cut(s)	1614
BsmFI	GGGAC	1 cut(s)	1590
BsmI	GAATGC	2 cut(s)	18, 932
BsnI	GGCC	5 cut(s)	165, 1001, 1269, 1278, 1356
BsoBI	CYCGRG	1 cut(s)	1947
Bsp119I	TTCGAA	1 cut(s)	882
Bsp1286I	GDGCHC	3 cut(s)	335, 953, 1576
Bsp1407I	TGTACA	1 cut(s)	309
Bsp143I	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
BspACI	CCGC	4 cut(s)	132, 174, 423, 1041
BspANI	GGCC	5 cut(s)	165, 1001, 1269, 1278, 1356
BspCNI	CTCAG	3 cut(s)	237, 403, 1210
BspFNI	CGCG	1 cut(s)	905
BspLI	GGNNCC	7 cut(s)	90, 203, 591, 801, 1000, 1025, 1755
BspMAI	CTGCAG	3 cut(s)	415, 872, 1597
BspMI	ACCTGC	1 cut(s)	462
BspPI	GGATC	6 cut(s)	584, 597, 794, 807, 1325, 1686
BspT104I	TTCGAA	1 cut(s)	882
BspT107I	GGYRCC	1 cut(s)	88
BsrDI	GCAATG	2 cut(s)	279, 990
BsrGI	TGTACA	1 cut(s)	309
BsrI	ACTGG	7 cut(s)	220, 526, 942, 1075, 1840, 1847, 2164
BssECI	CCNNGG	5 cut(s)	110, 1264, 1270, 1279, 1504
BssMI	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
BssNAI	GTATAC	2 cut(s)	581, 1087
BssT1I	CCWWGG	3 cut(s)	1264, 1279, 1504
Bst1107I	GTATAC	2 cut(s)	581, 1087
Bst2UI	CCWGG	4 cut(s)	111, 229, 609, 1271
Bst4CI	ACNGT	3 cut(s)	565, 1288, 1545
Bst6I	CTCTTC	1 cut(s)	1461
BstAUI	TGTACA	1 cut(s)	309
BstBI	TTCGAA	1 cut(s)	882
BstC8I	GCNNGC	1 cut(s)	1301
BstDEI	CTNAG	4 cut(s)	245, 390, 1030, 1218
BstENI	CCTNNNNNAGG	1 cut(s)	1268
BstF5I	GGATG	4 cut(s)	976, 1059, 2070, 2146
BstFNI	CGCG	1 cut(s)	905
BstHHI	GCGC	3 cut(s)	605, 907, 932
BstKTI	GATC	8 cut(s)	82, 592, 736, 802, 1320, 1694, 2113, 2196
BstMAI	GTCTC	1 cut(s)	1614
BstMBI	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
BstMWI	GCNNNNNNNGC	9 cut(s)	171, 290, 876, 957, 1275, 1670, 1997, 2096, 2105
BstNI	CCWGG	4 cut(s)	111, 229, 609, 1271
BstNSI	RCATGY	2 cut(s)	1303, 1728
BstSCI	CCNGG	6 cut(s)	109, 227, 607, 630, 955, 1269
BstSFI	CTRYAG	4 cut(s)	411, 496, 868, 1593
BstSLI	GKGCMC	1 cut(s)	335
BstUI	CGCG	1 cut(s)	905
BstV1I	GCAGC	6 cut(s)	141, 384, 521, 708, 972, 1607
BstX2I	RGATCY	3 cut(s)	589, 799, 1691
BstXI	CCANNNNNNTGG	1 cut(s)	1533
BstYI	RGATCY	3 cut(s)	589, 799, 1691
BstZ17I	GTATAC	2 cut(s)	581, 1087
Bsu36I	CCTNAGG	1 cut(s)	245
BsuRI	GGCC	5 cut(s)	165, 1001, 1269, 1278, 1356
BtrI	CACGTC	1 cut(s)	196
BtsCI	GGATG	4 cut(s)	976, 1059, 2070, 2146
BtsI	GCAGTG	1 cut(s)	420
BtsIMutI	CAGTG	3 cut(s)	420, 519, 949
BveI	ACCTGC	1 cut(s)	462
Cac8I	GCNNGC	1 cut(s)	1301
CaiI	CAGNNNCTG	1 cut(s)	1853
CfoI	GCGC	3 cut(s)	605, 907, 932
Cfr13I	GGNCC	3 cut(s)	999, 1024, 1753
CseI	GACGC	1 cut(s)	2088
CsiI	ACCWGGT	2 cut(s)	227, 607
Csp6I	GTAC	5 cut(s)	310, 895, 1284, 1730, 1737
CviAII	CATG	7 cut(s)	691, 1010, 1077, 1300, 1533, 1602, 1725
CviQI	GTAC	5 cut(s)	310, 895, 1284, 1730, 1737
DdeI	CTNAG	4 cut(s)	245, 390, 1030, 1218
DpnI	GATC	8 cut(s)	81, 591, 735, 801, 1319, 1693, 2112, 2195
DpnII	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
DraI	TTTAAA	2 cut(s)	726, 2013
DraIII	CACNNNGTG	2 cut(s)	231, 611
DriI	GACNNNNNGTC	1 cut(s)	1627
EaeI	YGGCCR	2 cut(s)	163, 1267
Eam1104I	CTCTTC	1 cut(s)	1461
Eam1105I	GACNNNNNGTC	1 cut(s)	1627
EarI	CTCTTC	1 cut(s)	1461
Eco130I	CCWWGG	3 cut(s)	1264, 1279, 1504
Eco47I	GGWCC	2 cut(s)	1024, 1753
Eco57I	CTGAAG	2 cut(s)	363, 1082
Eco81I	CCTNAGG	1 cut(s)	245
Eco88I	CYCGRG	1 cut(s)	1947
EcoNI	CCTNNNNNAGG	1 cut(s)	1268
EcoO109I	RGGNCCY	1 cut(s)	1024
EcoRI	GAATTC	1 cut(s)	1877
EcoRII	CCWGG	4 cut(s)	109, 227, 607, 1269
EcoT14I	CCWWGG	3 cut(s)	1264, 1279, 1504
ErhI	CCWWGG	3 cut(s)	1264, 1279, 1504
FaeI	CATG	7 cut(s)	694, 1013, 1080, 1303, 1536, 1605, 1728
FalI	AAGNNNNNCTT	4 cut(s)	1344, 1376, 1440, 1472
FaqI	GGGAC	1 cut(s)	1590
FatI	CATG	7 cut(s)	690, 1009, 1076, 1299, 1532, 1601, 1724
FauI	CCCGC	1 cut(s)	1034
FbaI	TGATCA	2 cut(s)	79, 2110
FblI	GTMKAC	4 cut(s)	384, 580, 1086, 1235
Fnu4HI	GCNGC	7 cut(s)	130, 373, 424, 535, 697, 961, 1596
FokI	GGATG	4 cut(s)	963, 1066, 2057, 2153
Fsp4HI	GCNGC	7 cut(s)	130, 373, 424, 535, 697, 961, 1596
FspBI	CTAG	5 cut(s)	17, 576, 773, 1460, 1646
FspI	TGCGCA	1 cut(s)	931
GlaI	GCGC	3 cut(s)	604, 906, 931
GluI	GCNGC	7 cut(s)	130, 373, 424, 535, 697, 961, 1596
HaeIII	GGCC	5 cut(s)	165, 1001, 1269, 1278, 1356
HapII	CCGG	4 cut(s)	171, 631, 956, 1179
HgaI	GACGC	1 cut(s)	2088
HhaI	GCGC	3 cut(s)	605, 907, 932
Hin1II	CATG	7 cut(s)	694, 1013, 1080, 1303, 1536, 1605, 1728
Hin6I	GCGC	3 cut(s)	603, 905, 930
HinP1I	GCGC	3 cut(s)	603, 905, 930
HincII	GTYRAC	3 cut(s)	505, 646, 1189
HindII	GTYRAC	3 cut(s)	505, 646, 1189
HinfI	GANTC	4 cut(s)	142, 1260, 1885, 2066
HpaI	GTTAAC	1 cut(s)	1189
HpaII	CCGG	4 cut(s)	171, 631, 956, 1179
HphI	GGTGA	7 cut(s)	188, 623, 945, 1193, 1357, 2062, 2195
Hpy188III	TCNNGA	9 cut(s)	244, 477, 485, 914, 1138, 1646, 1689, 1882, 1940
Hpy99I	CGWCG	2 cut(s)	197, 464
HpyAV	CCTTC	6 cut(s)	561, 878, 908, 1106, 1308, 1346
HpyCH4III	ACNGT	3 cut(s)	565, 1288, 1545
HpyCH4IV	ACGT	4 cut(s)	195, 1191, 1739, 2084
HpyF10VI	GCNNNNNNNGC	9 cut(s)	171, 290, 876, 957, 1275, 1670, 1997, 2096, 2105
HpyF3I	CTNAG	4 cut(s)	245, 390, 1030, 1218
HpySE526I	ACGT	4 cut(s)	195, 1191, 1739, 2084
Hsp92II	CATG	7 cut(s)	694, 1013, 1080, 1303, 1536, 1605, 1728
HspAI	GCGC	3 cut(s)	603, 905, 930
Ksp22I	TGATCA	2 cut(s)	79, 2110
KspAI	GTTAAC	1 cut(s)	1189
Kzo9I	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
LmnI	GCTCC	2 cut(s)	449, 1571
Lsp1109I	GCAGC	6 cut(s)	141, 384, 521, 708, 972, 1607
LweI	GCATC	3 cut(s)	80, 604, 1933
MabI	ACCWGGT	2 cut(s)	227, 607
MaeI	CTAG	5 cut(s)	17, 576, 773, 1460, 1646
MaeII	ACGT	4 cut(s)	195, 1191, 1739, 2084
MaeIII	GTNAC	9 cut(s)	319, 515, 671, 863, 914, 1545, 1858, 1903, 2050
MalI	GATC	8 cut(s)	81, 591, 735, 801, 1319, 1693, 2112, 2195
MboI	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
MboII	GAAGA	8 cut(s)	191, 738, 788, 1210, 1448, 1886, 1931, 2037
MflI	RGATCY	3 cut(s)	589, 799, 1691
MhlI	GDGCHC	3 cut(s)	335, 953, 1576
MlsI	TGGCCA	2 cut(s)	165, 1269
MluNI	TGGCCA	2 cut(s)	165, 1269
MlyI	GAGTC	1 cut(s)	2075
MmeI	TCCRAC	3 cut(s)	827, 1206, 2043
Mox20I	TGGCCA	2 cut(s)	165, 1269
MroXI	GAANNNNTTC	2 cut(s)	1489, 1764
MscI	TGGCCA	2 cut(s)	165, 1269
MseI	TTAA	8 cut(s)	455, 725, 1188, 1203, 1329, 1980, 2012, 2019
MslI	CAYNNNNRTG	3 cut(s)	47, 257, 1531
Msp20I	TGGCCA	2 cut(s)	165, 1269
MspA1I	CMGCKG	1 cut(s)	132
MspI	CCGG	4 cut(s)	171, 631, 956, 1179
MspR9I	CCNGG	6 cut(s)	111, 229, 609, 632, 957, 1271
Mva1269I	GAATGC	2 cut(s)	18, 932
MvaI	CCWGG	4 cut(s)	111, 229, 609, 1271
MvnI	CGCG	1 cut(s)	905
MwoI	GCNNNNNNNGC	9 cut(s)	171, 290, 876, 957, 1275, 1670, 1997, 2096, 2105
NciI	CCSGG	2 cut(s)	632, 957
NdeII	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
NlaIII	CATG	7 cut(s)	694, 1013, 1080, 1303, 1536, 1605, 1728
NlaIV	GGNNCC	7 cut(s)	90, 203, 591, 801, 1000, 1025, 1755
NmuCI	GTSAC	3 cut(s)	515, 914, 2050
NsbI	TGCGCA	1 cut(s)	931
NspI	RCATGY	2 cut(s)	1303, 1728
NspV	TTCGAA	1 cut(s)	882
OliI	CACNNNNGTG	1 cut(s)	47
PaeI	GCATGC	1 cut(s)	1303
PaeR7I	CTCGAG	1 cut(s)	1947
PciI	ACATGT	1 cut(s)	1724
PcsI	WCGNNNNNNNCGW	2 cut(s)	498, 1044
PctI	GAATGC	2 cut(s)	18, 932
PdmI	GAANNNNTTC	2 cut(s)	1489, 1764
PfeI	GAWTC	3 cut(s)	142, 1260, 1885
PflMI	CCANNNNNTGG	1 cut(s)	231
PkrI	GCNGC	7 cut(s)	131, 374, 425, 536, 698, 962, 1597
PleI	GAGTC	1 cut(s)	2074
PpsI	GAGTC	1 cut(s)	2074
PpuMI	RGGWCCY	1 cut(s)	1024
PscI	ACATGT	1 cut(s)	1724
Psp1406I	AACGTT	1 cut(s)	1191
Psp5II	RGGWCCY	1 cut(s)	1024
Psp6I	CCWGG	4 cut(s)	109, 227, 607, 1269
PspGI	CCWGG	4 cut(s)	109, 227, 607, 1269
PspN4I	GGNNCC	7 cut(s)	90, 203, 591, 801, 1000, 1025, 1755
PspPI	GGNCC	3 cut(s)	999, 1024, 1753
PspPPI	RGGWCCY	1 cut(s)	1024
PspXI	VCTCGAGB	1 cut(s)	1947
PstI	CTGCAG	3 cut(s)	415, 872, 1597
PstNI	CAGNNNCTG	1 cut(s)	1853
PsuI	RGATCY	3 cut(s)	589, 799, 1691
RsaI	GTAC	5 cut(s)	311, 896, 1285, 1731, 1738
RsaNI	GTAC	5 cut(s)	310, 895, 1284, 1730, 1737
RseI	CAYNNNNRTG	3 cut(s)	47, 257, 1531
SaqAI	TTAA	8 cut(s)	455, 725, 1188, 1203, 1329, 1980, 2012, 2019
SatI	GCNGC	7 cut(s)	130, 373, 424, 535, 697, 961, 1596
Sau3AI	GATC	8 cut(s)	79, 589, 733, 799, 1317, 1691, 2110, 2193
Sau96I	GGNCC	3 cut(s)	999, 1024, 1753
SchI	GAGTC	1 cut(s)	2075
ScrFI	CCNGG	6 cut(s)	111, 229, 609, 632, 957, 1271
SduI	GDGCHC	3 cut(s)	335, 953, 1576
SexAI	ACCWGGT	2 cut(s)	227, 607
SfaNI	GCATC	3 cut(s)	80, 604, 1933
SfcI	CTRYAG	4 cut(s)	411, 496, 868, 1593
SfiI	GGCCNNNNNGGCC	1 cut(s)	1275
Sfr274I	CTCGAG	1 cut(s)	1947
SfuI	TTCGAA	1 cut(s)	882
SinI	GGWCC	2 cut(s)	1024, 1753
SlaI	CTCGAG	1 cut(s)	1947
SmiMI	CAYNNNNRTG	3 cut(s)	47, 257, 1531
SmlI	CTYRAG	1 cut(s)	1947
SmoI	CTYRAG	1 cut(s)	1947
SphI	GCATGC	1 cut(s)	1303
SsiI	CCGC	4 cut(s)	132, 174, 423, 1041
SspI	AATATT	1 cut(s)	1252
SspMI	CTAG	5 cut(s)	17, 576, 773, 1460, 1646
StyD4I	CCNGG	6 cut(s)	109, 227, 607, 630, 955, 1269
StyI	CCWWGG	3 cut(s)	1264, 1279, 1504
TaaI	ACNGT	3 cut(s)	565, 1288, 1545
TaiI	ACGT	4 cut(s)	198, 1194, 1742, 2087
TaqI	TCGA	8 cut(s)	140, 210, 818, 841, 882, 1941, 1948, 2196
TatI	WGTACW	2 cut(s)	309, 1729
TauI	GCSGC	1 cut(s)	426
TfiI	GAWTC	3 cut(s)	142, 1260, 1885
Tru1I	TTAA	8 cut(s)	455, 725, 1188, 1203, 1329, 1980, 2012, 2019
Tru9I	TTAA	8 cut(s)	455, 725, 1188, 1203, 1329, 1980, 2012, 2019
TscAI	CASTG	3 cut(s)	420, 526, 949
TseFI	GTSAC	3 cut(s)	515, 914, 2050
TseI	GCWGC	6 cut(s)	129, 372, 534, 696, 960, 1595
Tsp45I	GTSAC	3 cut(s)	515, 914, 2050
TspGWI	ACGGA	4 cut(s)	812, 882, 1497, 1684
TspRI	CASTG	3 cut(s)	420, 526, 949
Van91I	CCANNNNNTGG	1 cut(s)	231
VpaK11BI	GGWCC	2 cut(s)	1024, 1753
XagI	CCTNNNNNAGG	1 cut(s)	1268
XapI	RAATTY	5 cut(s)	395, 1244, 1520, 1877, 1935
XbaI	TCTAGA	1 cut(s)	1645
XceI	RCATGY	2 cut(s)	1303, 1728
XhoI	CTCGAG	1 cut(s)	1947
XmiI	GTMKAC	4 cut(s)	384, 580, 1086, 1235
XmnI	GAANNNNTTC	2 cut(s)	1489, 1764
XspI	CTAG	5 cut(s)	17, 576, 773, 1460, 1646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.