Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0009572

Physical Location & Seq

Genomic Coordinates Forward (+)

4300354 .. 4312440

Gene Structure 12087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g05000.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3435 bp

ATGTATTGGCTGGCCGCTCGAAACGGCGTCGTTGCTCTCCCTCGCTGCCGTCCTCTTGCTCTGCTTCTTCGCCCCCCTCCCCGTAAATGCAGCTCCGTCGTTCCCTCTCCGATTCTCATTGTAAACAGTGGCCAGTTTCGGAGGATTCGTTGTTTCAAAGACCAGAAGGTTTTACGAGGAAGCAGAAAAACTACCAAGAAACTTAGTGCCTTGACTAATTTTGTGGATGAAAGAGCTCTTTCTAACATACTGTGGTGGAAGGAGAGGATGCATATGTGCAGGAAGCCTTCAACTGTCCAACTGGTGAAAAGGCTTGATTATTCTAATTTGCTTGGCTTGGATGTGAACTTAAAAAATGGGAGTCTGAAAGAGGGAACACTCAATTGGGAGATCTTGCAGTTCAAGTCAAAGTTTCCACGCGAAGTTTTGCTCTGCAGAGTCGGTGACTTTTATGAAGCCTTAGGAATAGATGCTTGTGTGTTGGTTGAATATGCAGGTTTGAATCCTTTTGGGGGTCTGCGTTCAGATAGTATCCCTAGAGCTGGTTGTCCAGTTGTGAATCTTCGACAAACTTTGGATGATCTGACAAGGAATGGGTTTTCAGTGTGCATAGTGGAAGAAGTTCTGGGTCCAACACAAGCGCGTTCCCGTAAAGGTCGTTTTATATCTGGGCATGCACATCCTGGTAGTCCTTATGTTTTCGGACTTGTTGGGGTCGATCACGATCTTGACTTTCCAGAACCAATGCCTGTAGTTGGAATATCTCGTTCTGCAAGAGGTTACTGCATCAATTTTGTATTGGAAACCATGAAAACTTATTCGTCAGAGGATGGTTTGACTGAAGAGGCCTTGGTTGCTAAGCTCCGTACTTGTCGGTACCATCATTTATTCCTTCATGCATCATTGAGGAACAATTTCTCAGGCACTTGTCGTTGGGGTGAATTTGGTGAGGGAGGCCTTCTATGGGGAGAATGTAATGGTAGGCATTTTGAATGGTTTGAAGGCAATCCTGTGTCTGACCTTTTGTCTAAGGTTAGAGATTTATATGGTCTTGATAATGAAGTTACATTTAGGAATGTCACTGTGTCTTCGGAAAACAGACCCCAGCCTCTATCCCTAGGAACAGCAACTCAAATTGGTGCCATACCAACAGAGGGAATACCTTGTTTGTTGAAGGTGTTGCTACCTTCGAATTGCTCAGGCCTACCTGCACTGTATGTTAGAGATCTTCTTCTTAATCCTCCTCCTTATGATATATCTTCCACAATTCAAGCAACATGCAGACTTATGAGCAGTATTACTTGCTCGATTCCCGAGTTTACTTGTGTTTCCCCTGCAAAGCTGGTGAAACTTCTGGAACTCAGGGAGGCCAATCATATCGAGTTTTGCAGAATTAAAAATGTTCTTGATGAAATACTGCACATGCATAAAAATCCTGAGCTGGGTAAGATTCTGAAGTTGTTGATGGATCCTACATGGGTGGTGACTGGGCTGAAAATTGACTTCGAGACATTAGTTAATGAATGTGAATGTGCTTCTGATAGAATTGGTGAAATGATCTCTCTAGAAGGTGAACATGATCAAAACCTCAGTTCCTTTCATGTTGTTCCTAGCGATTTTTTCGAGGATATGGAGTGTTCTTGGAAAGGTCGTATAAAAAGAATCCATATAGAGGAGGCATTTGCAGAAGTGGAAAAGGCTGCTGAGGCGTTATCCATAGCAGTCACTGAAGATTTCGTGCCCATTCTATCTAGAATTAAGGCTACCTCAGCTCCACTTGGAGGCCCGAAGGGAGAAATATTATATGCGCGGGAACATGAAGCTGTTTGGTTTAAGGGAAAACGATTTGCCCCGACTGTTTGGGCTGGCACCCCTGGGGAAGAACAAATTAAACAGCTTAAACCTGCTATAGATTCAAAAGGTAGAAAGGTTGGAGAAGAGTGGTTTACTACAATGAAAGTGGAGGATGCTTTAACAAGGTACCATGAAGCAGGTGCAAAAGCAAAAACAAGGGTATTGGAGTTGTTGAGAGAACTTTCTTCTGACTTACAAGCAAAGATCAATATCCTTGTCTTCGCCTCAATGCTTCTAGTTATTGCGAAGGCATTATTTGCTCATGTGAGTGAAGGGAGAAGAAGGAAATGGGTTTTTCCTGCCCTTGGAGAGTCCAGTTGGTCTGAGAATGTGAAACCATTGAGGGGAGAAAATAGAATGGAGATAGTCGGTCTATCACCATACTGGTTGAATGTAGCAGAAGGCAGCGCTGTAAATAACACTGTGGATATGCAATCCTTGTTCCTTTTAACTGGCCCCAATGGTGGTGGTAAATCAAGTTTGCTACGATCAATTTGTGCTGCTGCATTACTTGGAGTTTGTGGGTTTATGGTGCCTGCGCAATCTGCCTCGATTCCTCATTTTGATTCTATTATGCTTCACATGAAATCTTATGACAGCCCTGCTGATGGGAAAAGTTCCTTTCAGGTGGAAATGGCAGAAATTCGGTCTATTGTTTCTGGAGCCACTAAAAGAAGCCTCATACTTGTAGATGAAATTTGTCGAGGAACAGAAACAGCTAAGGGAACATGTATTGCTGGTAGTATTGTTGAAACTCTTGATGCAATAGGATGTCTAGGTATCATATCTACTCACTTGCATGGGATATTTAGCTTGCCTCTTAATACAAAGAATACGGTGCACAAAGCAATGGGAACTGTATATGTTGATGGACAACCAAAACCAACCTGGAAACTGATGGACGGAATTTGTAGAGAAAGCCTTGCATTTGAAACGGCCAAGAGGGAAGGAATTCCTGAATCAATAATTGAAAGAGCTGAAGGTCTGTACCAATCAGTTTATGCGAATGAGGTGATCGGAGGAAAGATTGACACAAAACTAGAAGAGTTCTGTTCTACAGGTTTTAATAATTTTGATATGTCTTGTGCTCAATCAAGTAGTGGTAGAGTTGAAGCTGTCGATGGGACAGGGTCAGTGAACAATATGGAAGTCTTACAGAAGGAGGTTGAGAGTGCAATCACCTTGATTTGCCAAAAGACGCTGGTTGAGCTTGACAATGAAAAAGCATCAGGACTTGCTGATATACAGTGCGTTCCAATTCATGTCAGGGAACAACCACCTCCATCAACCGTAGGTGCTTCGTGTGTATATGTGATTTTCAGAGCCGATAGAAAACTATATGTTGGGCAGACGGATGATTTGGAAGGTCGAGTGCGCACACATCGTTCAAAGGAAGGAATGCAAAAGGTGTATTTCCTTTATTTCACTGTCCCAGGGAAGAGCTTGGCTTGCCAATTGGAGACTCTTCTCATCAACCAGCTCCCTAATCAGGGCTTTCATCTCAGTAATGTGGCTGATGGTAAGCATAGGAATTTTGGCACCTCCAACATTTCCTCCGAAGGTGTGACCGTTTGTCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000217 GO:0000404 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0008094 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009507 GO:0009536 GO:0009579 GO:0009628 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032042 GO:0032135 GO:0032300 GO:0032991 GO:0033554 GO:0034357 GO:0034641 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043570 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044436 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIY-YIG MutS_I MutS_V

Protein Analysis

1145

Amino Acids

126.45

Weight (kDa)

7.27

Isoelectric Point (pI)

39.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_I	PF01624	130 - 212	7.9e-09	MutS domain I
MutS_V	PF00488	730 - 912	3.9e-40	MutS domain V

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24320 AT3G24320
fragaria_vesca	FvH4_4g05000 FvH4_4g05000 FvH4_4g05000
malus_domestica	MD13G1223200.v1.1
prunus_persica	Prupe.1G050200_v2.0.a1
pyrus_communis	pycom13g19710
rosa_chinensis	RchiOBHm_Chr4g0395811
rosa_laevigata	RLG00000009591
rosa_multiflora	Rmu_sc0001103.1_g000036 Rmu_sc0008803.1_g000001
rosa_roxburghii	Rroxscaffold_5G00340650
rosa_rugosa	Rorug03G0354100 Rorug03G0354200
rosa_samantha	Rh4AG062500 Rh4AG063500 Rh4AG067100 Rh4BG062200 Rh4CG068500 Rh4DG057100
rosa_wichuraiana	Rw4G005140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1982
Acc16I	TGCGCA	2 cut(s)	2394, 3230
Acc36I	ACCTGC	4 cut(s)	485, 1216, 1912, 1982
Acc65I	GGTACC	2 cut(s)	876, 1980
AccB1I	GGYRCC	6 cut(s)	876, 1139, 1868, 1980, 2386, 3392
AccBSI	CCGCTC	1 cut(s)	17
AccII	CGCG	3 cut(s)	420, 643, 1810
AciI	CCGC	2 cut(s)	15, 1810
AclWI	GGATC	2 cut(s)	1463, 1476
AcoI	YGGCCR	3 cut(s)	12, 130, 2790
AcsI	RAATTY	6 cut(s)	941, 2496, 2550, 2760, 2805, 3385
AcuI	CTGAAG	4 cut(s)	861, 1475, 1749, 2853
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	4 cut(s)	868, 878, 1982, 2843
AfeI	AGCGCT	1 cut(s)	2263
AflIII	ACRYGT	1 cut(s)	2582
AhdI	GACNNNNNGTC	2 cut(s)	1024, 3426
AjnI	CCWGG	4 cut(s)	682, 1873, 2741, 3286
AjuI	GAANNNNNNNTTGG	2 cut(s)	367, 399
Alw21I	GWGCWC	3 cut(s)	238, 2697, 2944
Alw26I	GTCTC	2 cut(s)	1502, 3308
Alw44I	GTGCAC	1 cut(s)	2693
AlwI	GGATC	2 cut(s)	1463, 1476
AlwNI	CAGNNNCTG	1 cut(s)	1727
Ama87I	CYCGRG	1 cut(s)	1313
Aor51HI	AGCGCT	1 cut(s)	2263
AoxI	GGCC	9 cut(s)	12, 130, 846, 955, 1201, 1368, 1783, 2308, 2790
ApaLI	GTGCAC	1 cut(s)	2693
ApeKI	GCWGC	6 cut(s)	45, 90, 1700, 2259, 2354, 2357
ApoI	RAATTY	6 cut(s)	941, 2496, 2550, 2760, 2805, 3385
ArsI	GACNNNNNNTTYG	2 cut(s)	3196, 3228
Asp700I	GAANNNNTTC	3 cut(s)	621, 914, 2805
Asp718I	GGTACC	2 cut(s)	876, 1980
AspA2I	CCTAGG	1 cut(s)	1117
AspLEI	GCGC	5 cut(s)	643, 1810, 2264, 2395, 3231
AspS9I	GGNCC	3 cut(s)	629, 1784, 2309
AsuII	TTCGAA	1 cut(s)	1190
AvaI	CYCGRG	1 cut(s)	1313
AvaII	GGWCC	1 cut(s)	629
AvrII	CCTAGG	1 cut(s)	1117
AxyI	CCTNAGG	1 cut(s)	460
BaeGI	GKGCMC	2 cut(s)	1743, 2697
BalI	TGGCCA	1 cut(s)	132
BamHI	GGATCC	1 cut(s)	1468
BanI	GGYRCC	6 cut(s)	876, 1139, 1868, 1980, 2386, 3392
BanII	GRGCYC	1 cut(s)	238
BbsI	GAAGAC	2 cut(s)	1080, 2065
Bbv12I	GWGCWC	3 cut(s)	238, 2697, 2944
BbvCI	CCTCAGC	2 cut(s)	1704, 1768
BbvI	GCAGC	6 cut(s)	32, 102, 1687, 2271, 2341, 2344
BccI	CCATC	9 cut(s)	824, 888, 1459, 2456, 2717, 2746, 2969, 3145, 3365
BceAI	ACGGC	3 cut(s)	33, 40, 2805
BcgI	CGANNNNNNTGC	2 cut(s)	79, 113
BciT130I	CCWGG	4 cut(s)	684, 1875, 2743, 3288
BciVI	GTATCC	1 cut(s)	542
BclI	TGATCA	1 cut(s)	1579
BcoDI	GTCTC	2 cut(s)	1502, 3308
BfaI	CTAG	8 cut(s)	537, 1118, 1565, 1611, 1752, 2090, 2630, 2894
BfmI	CTRYAG	4 cut(s)	433, 750, 1908, 2910
BfoI	RGCGCY	1 cut(s)	2265
BfuAI	ACCTGC	4 cut(s)	485, 1216, 1912, 1982
BfuI	GTATCC	1 cut(s)	542
BglII	AGATCT	2 cut(s)	390, 1225
BisI	GCNGC	7 cut(s)	15, 46, 91, 1701, 2260, 2355, 2358
BlnI	CCTAGG	1 cut(s)	1117
BlpI	GCTNAGC	1 cut(s)	858
BlsI	GCNGC	7 cut(s)	16, 47, 92, 1702, 2261, 2356, 2359
Bme1390I	CCNGG	4 cut(s)	684, 1875, 2743, 3288
Bme18I	GGWCC	1 cut(s)	629
BmeRI	GACNNNNNGTC	2 cut(s)	1024, 3426
BmeT110I	CYCGRG	1 cut(s)	1313
BmgT120I	GGNCC	3 cut(s)	629, 1784, 2309
BmrFI	CCNGG	4 cut(s)	684, 1875, 2743, 3288
BmrI	ACTGGG	1 cut(s)	1497
BmsI	GCATC	7 cut(s)	258, 460, 795, 908, 1957, 2605, 3089
BmuI	ACTGGG	1 cut(s)	1497
BpiI	GAAGAC	2 cut(s)	1080, 2065
BpmI	CTGGAG	1 cut(s)	2535
Bpu10I	CCTNAGC	5 cut(s)	1198, 1437, 1704, 1768, 2574
Bpu1102I	GCTNAGC	1 cut(s)	858
Bpu14I	TTCGAA	1 cut(s)	1190
BsaBI	GATNNNNATC	2 cut(s)	723, 2063
BsaHI	GRCGYC	1 cut(s)	27
BsaJI	CCNNGG	7 cut(s)	849, 1117, 1873, 1874, 2158, 3286, 3287
BsaXI	ACNNNNNCTCC	6 cut(s)	133, 163, 1756, 1786, 3392, 3422
Bse1I	ACTGG	7 cut(s)	133, 306, 551, 1492, 2169, 2243, 2311
Bse21I	CCTNAGG	1 cut(s)	460
Bse3DI	GCAATG	1 cut(s)	2709
Bse8I	GATNNNNATC	2 cut(s)	723, 2063
BseBI	CCWGG	4 cut(s)	684, 1875, 2743, 3288
BseDI	CCNNGG	7 cut(s)	849, 1117, 1873, 1874, 2158, 3286, 3287
BseGI	GGATG	9 cut(s)	232, 273, 346, 583, 679, 835, 1972, 2630, 3214
BseJI	GATNNNNATC	2 cut(s)	723, 2063
BseMI	GCAATG	1 cut(s)	2709
BseMII	CTCAG	9 cut(s)	933, 1212, 1375, 1428, 1603, 1695, 1782, 2169, 3370
BseNI	ACTGG	7 cut(s)	133, 306, 551, 1492, 2169, 2243, 2311
BseRI	GAGGAG	2 cut(s)	1233, 1688
BseSI	GKGCMC	2 cut(s)	1743, 2697
BseXI	GCAGC	6 cut(s)	32, 102, 1687, 2271, 2341, 2344
BseYI	CCCAGC	2 cut(s)	1104, 1441
BsgI	GTGCAG	3 cut(s)	298, 1194, 1403
Bsh1236I	CGCG	3 cut(s)	420, 643, 1810
BshFI	GGCC	9 cut(s)	14, 132, 848, 957, 1203, 1370, 1785, 2310, 2792
BshNI	GGYRCC	6 cut(s)	876, 1139, 1868, 1980, 2386, 3392
BsiHKAI	GWGCWC	3 cut(s)	238, 2697, 2944
BsiHKCI	CYCGRG	1 cut(s)	1313
BslFI	GGGAC	2 cut(s)	2992, 3269
BsmAI	GTCTC	2 cut(s)	1502, 3308
BsmFI	GGGAC	2 cut(s)	2992, 3269
BsmI	GAATGC	1 cut(s)	3258
BsnI	GGCC	9 cut(s)	14, 132, 848, 957, 1203, 1370, 1785, 2310, 2792
BsoBI	CYCGRG	1 cut(s)	1313
Bsp119I	TTCGAA	1 cut(s)	1190
Bsp1286I	GDGCHC	4 cut(s)	238, 1743, 2697, 2944
Bsp1720I	GCTNAGC	1 cut(s)	858
BspACI	CCGC	2 cut(s)	15, 1810
BspANI	GGCC	9 cut(s)	14, 132, 848, 957, 1203, 1370, 1785, 2310, 2792
BspCNI	CTCAG	9 cut(s)	932, 1211, 1374, 1429, 1602, 1696, 1781, 2170, 3369
BspFNI	CGCG	3 cut(s)	420, 643, 1810
BspMAI	CTGCAG	1 cut(s)	437
BspMI	ACCTGC	4 cut(s)	485, 1216, 1912, 1982
BspPI	GGATC	2 cut(s)	1463, 1476
BspQI	GCTCTTC	1 cut(s)	3287
BspT104I	TTCGAA	1 cut(s)	1190
BspT107I	GGYRCC	6 cut(s)	876, 1139, 1868, 1980, 2386, 3392
BsrBI	CCGCTC	1 cut(s)	17
BsrDI	GCAATG	1 cut(s)	2709
BsrI	ACTGG	7 cut(s)	133, 306, 551, 1492, 2169, 2243, 2311
BssECI	CCNNGG	7 cut(s)	849, 1117, 1873, 1874, 2158, 3286, 3287
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	3 cut(s)	849, 1117, 2158
Bst2UI	CCWGG	4 cut(s)	684, 1875, 2743, 3288
Bst6I	CTCTTC	5 cut(s)	837, 1932, 2892, 3287, 3324
BstACI	GRCGYC	1 cut(s)	27
BstAPI	GCANNNNNTGC	1 cut(s)	2111
BstBI	TTCGAA	1 cut(s)	1190
BstC8I	GCNNGC	6 cut(s)	12, 675, 1867, 2391, 2669, 3304
BstF5I	GGATG	9 cut(s)	232, 273, 346, 583, 679, 835, 1972, 2630, 3214
BstFNI	CGCG	3 cut(s)	420, 643, 1810
BstH2I	RGCGCY	1 cut(s)	2265
BstHHI	GCGC	5 cut(s)	643, 1810, 2264, 2395, 3231
BstMAI	GTCTC	2 cut(s)	1502, 3308
BstMWI	GCNNNNNNNGC	7 cut(s)	854, 1706, 1769, 2111, 2399, 3061, 3303
BstNI	CCWGG	4 cut(s)	684, 1875, 2743, 3288
BstNSI	RCATGY	4 cut(s)	677, 1281, 1426, 2586
BstSCI	CCNGG	4 cut(s)	682, 1873, 2741, 3286
BstSFI	CTRYAG	4 cut(s)	433, 750, 1908, 2910
BstSLI	GKGCMC	2 cut(s)	1743, 2697
BstUI	CGCG	3 cut(s)	420, 643, 1810
BstV1I	GCAGC	6 cut(s)	32, 102, 1687, 2271, 2341, 2344
BstV2I	GAAGAC	2 cut(s)	1080, 2065
BstX2I	RGATCY	3 cut(s)	390, 1225, 1468
BstYI	RGATCY	3 cut(s)	390, 1225, 1468
Bsu36I	CCTNAGG	1 cut(s)	460
BsuI	GTATCC	1 cut(s)	542
BsuRI	GGCC	9 cut(s)	14, 132, 848, 957, 1203, 1370, 1785, 2310, 2792
BtsCI	GGATG	9 cut(s)	232, 273, 346, 583, 679, 835, 1972, 2630, 3214
BtsIMutI	CAGTG	9 cut(s)	133, 609, 1080, 1211, 1725, 2274, 2994, 3107, 3279
BveI	ACCTGC	4 cut(s)	485, 1216, 1912, 1982
Cac8I	GCNNGC	6 cut(s)	12, 675, 1867, 2391, 2669, 3304
CaiI	CAGNNNCTG	1 cut(s)	1727
CfoI	GCGC	5 cut(s)	643, 1810, 2264, 2395, 3231
Cfr13I	GGNCC	3 cut(s)	629, 1784, 2309
CseI	GACGC	2 cut(s)	16, 3061
Csp6I	GTAC	4 cut(s)	867, 877, 1981, 2842
CspCI	CAANNNNNGTGG	4 cut(s)	1941, 1976, 2302, 2337
CviQI	GTAC	4 cut(s)	867, 877, 1981, 2842
DriI	GACNNNNNGTC	2 cut(s)	1024, 3426
EaeI	YGGCCR	3 cut(s)	12, 130, 2790
Eam1104I	CTCTTC	5 cut(s)	837, 1932, 2892, 3287, 3324
Eam1105I	GACNNNNNGTC	2 cut(s)	1024, 3426
EarI	CTCTTC	5 cut(s)	837, 1932, 2892, 3287, 3324
Ecl136II	GAGCTC	1 cut(s)	236
Eco130I	CCWWGG	3 cut(s)	849, 1117, 2158
Eco147I	AGGCCT	3 cut(s)	848, 957, 1203
Eco24I	GRGCYC	1 cut(s)	238
Eco47I	GGWCC	1 cut(s)	629
Eco47III	AGCGCT	1 cut(s)	2263
Eco53kI	GAGCTC	1 cut(s)	236
Eco57I	CTGAAG	4 cut(s)	861, 1475, 1749, 2853
Eco81I	CCTNAGG	1 cut(s)	460
Eco88I	CYCGRG	1 cut(s)	1313
EcoICRI	GAGCTC	1 cut(s)	236
EcoRI	GAATTC	1 cut(s)	2805
EcoRII	CCWGG	4 cut(s)	682, 1873, 2741, 3286
EcoT14I	CCWWGG	3 cut(s)	849, 1117, 2158
EcoT22I	ATGCAT	3 cut(s)	273, 901, 1428
EcoT38I	GRGCYC	1 cut(s)	238
ErhI	CCWWGG	3 cut(s)	849, 1117, 2158
FaqI	GGGAC	2 cut(s)	2992, 3269
FauI	CCCGC	1 cut(s)	1803
FauNDI	CATATG	1 cut(s)	273
FbaI	TGATCA	1 cut(s)	1579
Fnu4HI	GCNGC	7 cut(s)	15, 46, 91, 1701, 2260, 2355, 2358
FokI	GGATG	9 cut(s)	239, 280, 353, 590, 666, 842, 1979, 2637, 3221
FriOI	GRGCYC	1 cut(s)	238
Fsp4HI	GCNGC	7 cut(s)	15, 46, 91, 1701, 2260, 2355, 2358
FspAI	RTGCGCAY	1 cut(s)	3230
FspBI	CTAG	8 cut(s)	537, 1118, 1565, 1611, 1752, 2090, 2630, 2894
FspI	TGCGCA	2 cut(s)	2394, 3230
GlaI	GCGC	5 cut(s)	642, 1809, 2263, 2394, 3230
GluI	GCNGC	7 cut(s)	15, 46, 91, 1701, 2260, 2355, 2358
GsaI	CCCAGC	2 cut(s)	1108, 1445
GsuI	CTGGAG	1 cut(s)	2535
HaeII	RGCGCY	1 cut(s)	2265
HaeIII	GGCC	9 cut(s)	14, 132, 848, 957, 1203, 1370, 1785, 2310, 2792
HgaI	GACGC	2 cut(s)	16, 3061
HhaI	GCGC	5 cut(s)	643, 1810, 2264, 2395, 3231
Hin1I	GRCGYC	1 cut(s)	27
Hin6I	GCGC	5 cut(s)	641, 1808, 2262, 2393, 3229
HinP1I	GCGC	5 cut(s)	641, 1808, 2262, 2393, 3229
Hpy166II	GTNNAC	7 cut(s)	124, 346, 1320, 1574, 1947, 2695, 2992
Hpy8I	GTNNAC	7 cut(s)	124, 346, 1320, 1574, 1947, 2695, 2992
Hpy99I	CGWCG	2 cut(s)	32, 101
HpyF10VI	GCNNNNNNNGC	7 cut(s)	854, 1706, 1769, 2111, 2399, 3061, 3303
Hsp92I	GRCGYC	1 cut(s)	27
HspAI	GCGC	5 cut(s)	641, 1808, 2262, 2393, 3229
KpnI	GGTACC	2 cut(s)	880, 1984
Ksp22I	TGATCA	1 cut(s)	1579
LguI	GCTCTTC	1 cut(s)	3287
LmnI	GCTCC	5 cut(s)	98, 867, 1777, 2516, 3339
Lsp1109I	GCAGC	6 cut(s)	32, 102, 1687, 2271, 2341, 2344
LweI	GCATC	7 cut(s)	258, 460, 795, 908, 1957, 2605, 3089
MaeI	CTAG	8 cut(s)	537, 1118, 1565, 1611, 1752, 2090, 2630, 2894
MaeIII	GTNAC	7 cut(s)	443, 779, 1063, 1078, 1483, 1723, 3418
MbiI	CCGCTC	1 cut(s)	17
MfeI	CAATTG	2 cut(s)	382, 3308
MflI	RGATCY	3 cut(s)	390, 1225, 1468
MhlI	GDGCHC	4 cut(s)	238, 1743, 2697, 2944
MlsI	TGGCCA	1 cut(s)	132
MluNI	TGGCCA	1 cut(s)	132
MlyI	GAGTC	4 cut(s)	370, 447, 2174, 3310
MmeI	TCCRAC	5 cut(s)	322, 656, 736, 1912, 3423
Mox20I	TGGCCA	1 cut(s)	132
Mph1103I	ATGCAT	3 cut(s)	273, 901, 1428
MroXI	GAANNNNTTC	3 cut(s)	621, 914, 2805
MscI	TGGCCA	1 cut(s)	132
MslI	CAYNNNNRTG	2 cut(s)	2121, 2652
Msp20I	TGGCCA	1 cut(s)	132
MspR9I	CCNGG	4 cut(s)	684, 1875, 2743, 3288
MunI	CAATTG	2 cut(s)	382, 3308
Mva1269I	GAATGC	1 cut(s)	3258
MvaI	CCWGG	4 cut(s)	684, 1875, 2743, 3288
MvnI	CGCG	3 cut(s)	420, 643, 1810
MwoI	GCNNNNNNNGC	7 cut(s)	854, 1706, 1769, 2111, 2399, 3061, 3303
NdeI	CATATG	1 cut(s)	273
NmuCI	GTSAC	5 cut(s)	443, 1078, 1483, 1723, 3418
NsbI	TGCGCA	2 cut(s)	2394, 3230
NsiI	ATGCAT	3 cut(s)	273, 901, 1428
NspI	RCATGY	4 cut(s)	677, 1281, 1426, 2586
NspV	TTCGAA	1 cut(s)	1190
PaeI	GCATGC	1 cut(s)	677
PaqCI	CACCTGC	1 cut(s)	1982
PasI	CCCWGGG	2 cut(s)	1874, 3287
PceI	AGGCCT	3 cut(s)	848, 957, 1203
PciI	ACATGT	1 cut(s)	2582
PciSI	GCTCTTC	1 cut(s)	3287
PcsI	WCGNNNNNNNCGW	1 cut(s)	145
PctI	GAATGC	1 cut(s)	3258
PdmI	GAANNNNTTC	3 cut(s)	621, 914, 2805
PflFI	GACNNNGTC	1 cut(s)	2983
PkrI	GCNGC	7 cut(s)	16, 47, 92, 1702, 2261, 2356, 2359
PleI	GAGTC	4 cut(s)	369, 446, 2173, 3310
PpsI	GAGTC	4 cut(s)	369, 446, 2173, 3310
PscI	ACATGT	1 cut(s)	2582
Psp124BI	GAGCTC	1 cut(s)	238
Psp6I	CCWGG	4 cut(s)	682, 1873, 2741, 3286
PspFI	CCCAGC	2 cut(s)	1104, 1441
PspGI	CCWGG	4 cut(s)	682, 1873, 2741, 3286
PspPI	GGNCC	3 cut(s)	629, 1784, 2309
PstI	CTGCAG	1 cut(s)	437
PstNI	CAGNNNCTG	1 cut(s)	1727
PsuI	RGATCY	3 cut(s)	390, 1225, 1468
PsyI	GACNNNGTC	1 cut(s)	2983
RsaI	GTAC	4 cut(s)	868, 878, 1982, 2843
RsaNI	GTAC	4 cut(s)	867, 877, 1981, 2842
RseI	CAYNNNNRTG	2 cut(s)	2121, 2652
SacI	GAGCTC	1 cut(s)	238
SapI	GCTCTTC	1 cut(s)	3287
SatI	GCNGC	7 cut(s)	15, 46, 91, 1701, 2260, 2355, 2358
Sau96I	GGNCC	3 cut(s)	629, 1784, 2309
SchI	GAGTC	4 cut(s)	370, 447, 2174, 3310
ScrFI	CCNGG	4 cut(s)	684, 1875, 2743, 3288
SduI	GDGCHC	4 cut(s)	238, 1743, 2697, 2944
SfaNI	GCATC	7 cut(s)	258, 460, 795, 908, 1957, 2605, 3089
SfcI	CTRYAG	4 cut(s)	433, 750, 1908, 2910
SfuI	TTCGAA	1 cut(s)	1190
SinI	GGWCC	1 cut(s)	629
SmiMI	CAYNNNNRTG	2 cut(s)	2121, 2652
SphI	GCATGC	1 cut(s)	677
SseBI	AGGCCT	3 cut(s)	848, 957, 1203
SsiI	CCGC	2 cut(s)	15, 1810
SspI	AATATT	1 cut(s)	1800
SspMI	CTAG	8 cut(s)	537, 1118, 1565, 1611, 1752, 2090, 2630, 2894
SstI	GAGCTC	1 cut(s)	238
StuI	AGGCCT	3 cut(s)	848, 957, 1203
StyD4I	CCNGG	4 cut(s)	682, 1873, 2741, 3286
StyI	CCWWGG	3 cut(s)	849, 1117, 2158
TaqII	GACCGA	2 cut(s)	2213, 2490
TauI	GCSGC	1 cut(s)	17
TscAI	CASTG	9 cut(s)	133, 609, 1087, 1218, 1732, 2281, 2994, 3107, 3286
TseFI	GTSAC	5 cut(s)	443, 1078, 1483, 1723, 3418
TseI	GCWGC	6 cut(s)	45, 90, 1700, 2259, 2354, 2357
Tsp45I	GTSAC	5 cut(s)	443, 1078, 1483, 1723, 3418
TspGWI	ACGGA	4 cut(s)	85, 854, 2772, 3221
TspRI	CASTG	9 cut(s)	133, 609, 1087, 1218, 1732, 2281, 2994, 3107, 3286
Tth111I	GACNNNGTC	1 cut(s)	2983
VneI	GTGCAC	1 cut(s)	2693
VpaK11BI	GGWCC	1 cut(s)	629
XapI	RAATTY	6 cut(s)	941, 2496, 2550, 2760, 2805, 3385
XbaI	TCTAGA	2 cut(s)	1564, 1751
XceI	RCATGY	4 cut(s)	677, 1281, 1426, 2586
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2739
XmaJI	CCTAGG	1 cut(s)	1117
XmnI	GAANNNNTTC	3 cut(s)	621, 914, 2805
XspI	CTAG	8 cut(s)	537, 1118, 1565, 1611, 1752, 2090, 2630, 2894
Zsp2I	ATGCAT	3 cut(s)	273, 901, 1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.