Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008803.1

Orthogroup ID

OG0009572

Physical Location & Seq

Genomic Coordinates Reverse (-)

1354 .. 10820

Gene Structure 9467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008803.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2952 bp

aatcttcgacaaactttggatgatctgactcggaatgggttttcagtgtgcatagtggaagaagttcagggtccaacacaagcgcgttcccgtaaaggtcgttttatatctgggcatgcacatcccggtagtccttacgtttttggacttgttggggtcgatcacgatcttgactttccagaaccaatgcctgtagttggaatatctcgttctgctagaggttattgcatcaactttgtattggaaaccatgaaaacttattcatcagaggatggtttgactgaagaagccttggttgctaagctccgtacttgtcggtaccatcatttattcctgcatacatcattgaggaacaatttctcaggcacttgtcgttggggtgaatttggtgagggaggccttctatggggagaatgtagcggtaggcattttgaatggtttgaaggcaatcctgtgtctgagcttttgtctaaggttaatgtatctcattttcatttggttaaagatttatatggtcttgataatgaagttacatttaggaatgtcactgtgtcttcagaaaacagaccccagcctctatccctaggaacagcgactcaaattggcgccataccaactgagggaataccttgtttgttgaaggtgttgcttccttcaaactgctcaggcctacctgtactgtatgttagagatcttcttcttaatcctcctccttatgatatatcttccacaattcaagcaacatgcagacttatgagcagcattacttgctcgattcctgagtttacttgtgtttcacctgcaaagctggtgaaacttctggaactcagggaggccaatcatattgagttttgcagaattaaaaatgttctcgatgaaatactgcacatgcataaacatcctgagctgggtaagattctgaagttgttgatggatcctacatgggtggcgactgggttgaaaattgacttcgagacattagttaatgaatgtgaatgcgcttctgatagaattggtgaaatgatctccctagatggtgaacatgatcaaaaccttagttcctttcctgttgttcctagtgattttttcgaggatatggagtgttcttggaaaggtcgtataaagagaatccatatagaggaggcctttgcagaagtggaaaaggctgctgaggcgttatccttagcagtcactgaagatttcatgcccatcgtatctagaataaaggctactacagctccacttggaggcccgaagggagaaatattatatgcgcgggagcatgaagctgtttggtttaaaggaaaacgatttgctccggctgtttgggctggcacccctggggaagaacaaattaaacagcttaaacctgctttagattcaaaaggtagaaaggtcggagaagagtggtttacgacaatgaaagtggaggatgctttaacaaggtaccatgaagcaggtgcgaaagcaaaaacaagggttttggagttgttgagagaactttcttctgacttacaagcaaagatcaatgtccttgtctttgcctcaatgcttctagttattgcaaaggcattatttgctcatgtgagtgaagggagaagaaggaaatgggtttttcctgcccttggagagtccagttggtctaagaatgtgaaaccattgatgggagaaaatagaatggagatagttggtctatcaccatactggttggacgtagcagaaggcagtgctgtaaataacactgtggatatgcaatcgttgttccttttaactggacccaatggtggtggtaaatcaagtctgctacgatcaatttgtgctgctgcattacttggagtttgtgggtttatggtgcctgcagagtctgcctcgattcctcattttgattctattatgcttcacatgaaatcttatgacagccccgctgatgggaaaagttcctttcaggtggaaatggcagaaattcggtctattgtttctggagcgactaaaagaagccttgttcttgtagatgaaatttgtcgaggaacagaaacagctaagggaacatgtattgctggtagtattgttgaaactcttgatgcaataggatgtcttggtatcatatctactcacttgcatgggatatttagcttgcctcttaatacaaagaatacggtgcataaagcaatgggaactgtatatgttgacagacaaccaaaaccaacctggaaattgatggacggcatatgtagagaaagccttgcatttgaaacggctaagaaggaaggaattcctgaaacaataattgaaagagctgaaggcctgtaccattcagtttatgcaaaggaggtgattcgaggaaagattgacccaaaactagattcagtttatgcaaaggaggtgattcgaggaaagattgacccaaaactagaagagttctgttccacaggttttaataattttgataggtctcatcctcaatcaagtagtgctagagttgaagctgtcgatgggacaggatcagtgaacaatatggaagtcttacagaaggaggttgagagtgcaatcaccttgatttgccaaaagaagctgattgagctcgacaataagaaaacatcagaacttactgatatacagtgtgttccaattcatgtcagggaacaaccacctccatcaaccgtaggtgcttcatgtgtatatgtgattttcagacccgataggaaactatatgttggacagacggatgatttggagggtcgggtgcgcacacatcgttcaaaggaaggaatgcaaaaggcaaattttctttatttcactgtcccggggaagagcttggcttgccaattagagactcttctcatcaaccagctccctaatcaaggcttccatctcagtaatgtggctgatggtaaacataggaattttggcacctccaacatttccttggaaggtgtgacggtttgtccataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000217 GO:0000404 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0008094 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009507 GO:0009536 GO:0009579 GO:0009628 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032042 GO:0032135 GO:0032300 GO:0032991 GO:0033554 GO:0034357 GO:0034641 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043570 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044436 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIY-YIG MutS_I MutS_V

Protein Analysis

983

Amino Acids

108.63

Weight (kDa)

6.28

Isoelectric Point (pI)

37.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24320 AT3G24320
fragaria_vesca	FvH4_4g05000 FvH4_4g05000 FvH4_4g05000
malus_domestica	MD13G1223200.v1.1
prunus_persica	Prupe.1G050200_v2.0.a1
pyrus_communis	pycom13g19710
rosa_chinensis	RchiOBHm_Chr4g0395811
rosa_laevigata	RLG00000009591
rosa_multiflora	Rmu_sc0001103.1_g000036 Rmu_sc0008803.1_g000001
rosa_roxburghii	Rroxscaffold_5G00340650
rosa_rugosa	Rorug03G0354100 Rorug03G0354200
rosa_samantha	Rh4AG062500 Rh4AG063500 Rh4AG067100 Rh4BG062200 Rh4CG068500 Rh4DG057100
rosa_wichuraiana	Rw4G005140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	808, 1448
Acc16I	TGCGCA	1 cut(s)	2747
Acc36I	ACCTGC	3 cut(s)	808, 1378, 1448
Acc65I	GGTACC	2 cut(s)	318, 1446
AccB1I	GGYRCC	6 cut(s)	318, 605, 1334, 1446, 1852, 2909
AccII	CGCG	2 cut(s)	85, 1276
AciI	CCGC	3 cut(s)	420, 1276, 1923
AclWI	GGATC	3 cut(s)	929, 942, 2509
AcsI	RAATTY	6 cut(s)	383, 1962, 2016, 2271, 2782, 2902
AcuI	CTGAAG	5 cut(s)	303, 540, 941, 1215, 2319
AcyI	GRCGYC	1 cut(s)	606
AfaI	GTAC	5 cut(s)	310, 320, 678, 1448, 2309
AflIII	ACRYGT	1 cut(s)	2048
AhdI	GACNNNNNGTC	1 cut(s)	2943
AjnI	CCWGG	2 cut(s)	1339, 2207
AjuI	GAANNNNNNNTTGG	2 cut(s)	2347, 2379
Alw21I	GWGCWC	1 cut(s)	2583
Alw26I	GTCTC	3 cut(s)	968, 2457, 2825
AlwI	GGATC	3 cut(s)	929, 942, 2509
AlwNI	CAGNNNCTG	2 cut(s)	1193, 1865
Ama87I	CYCGRG	1 cut(s)	2803
AoxI	GGCC	6 cut(s)	397, 667, 834, 1143, 1249, 2302
ApeKI	GCWGC	4 cut(s)	759, 1166, 1820, 1823
ApoI	RAATTY	6 cut(s)	383, 1962, 2016, 2271, 2782, 2902
ArsI	GACNNNNNNTTYG	2 cut(s)	2713, 2745
Asp700I	GAANNNNTTC	3 cut(s)	63, 356, 2271
Asp718I	GGTACC	2 cut(s)	318, 1446
AspA2I	CCTAGG	1 cut(s)	583
AspLEI	GCGC	5 cut(s)	85, 608, 1001, 1276, 2748
AspS9I	GGNCC	3 cut(s)	71, 1250, 1775
AsuC2I	CCSGG	3 cut(s)	126, 2804, 2805
AvaI	CYCGRG	1 cut(s)	2803
AvaII	GGWCC	2 cut(s)	71, 1775
AvrII	CCTAGG	1 cut(s)	583
BamHI	GGATCC	1 cut(s)	934
BanI	GGYRCC	6 cut(s)	318, 605, 1334, 1446, 1852, 2909
BanII	GRGCYC	1 cut(s)	2583
BbsI	GAAGAC	1 cut(s)	546
Bbv12I	GWGCWC	1 cut(s)	2583
BbvCI	CCTCAGC	1 cut(s)	1170
BbvI	GCAGC	4 cut(s)	771, 1153, 1807, 1810
BceAI	ACGGC	2 cut(s)	2239, 2271
BciT130I	CCWGG	2 cut(s)	1341, 2209
BclI	TGATCA	1 cut(s)	1045
BcnI	CCSGG	3 cut(s)	126, 2804, 2805
BcoDI	GTCTC	3 cut(s)	968, 2457, 2825
BfaI	CTAG	9 cut(s)	216, 584, 1031, 1077, 1218, 1556, 2360, 2411, 2475
BfmI	CTRYAG	3 cut(s)	192, 1233, 1857
BfoI	RGCGCY	1 cut(s)	609
BfuAI	ACCTGC	3 cut(s)	808, 1378, 1448
BglII	AGATCT	1 cut(s)	691
BisI	GCNGC	4 cut(s)	760, 1167, 1821, 1824
BlnI	CCTAGG	1 cut(s)	583
BlpI	GCTNAGC	1 cut(s)	300
BlsI	GCNGC	4 cut(s)	761, 1168, 1822, 1825
Bme1390I	CCNGG	5 cut(s)	126, 1341, 2209, 2804, 2805
Bme18I	GGWCC	2 cut(s)	71, 1775
BmeRI	GACNNNNNGTC	1 cut(s)	2943
BmeT110I	CYCGRG	1 cut(s)	2803
BmgT120I	GGNCC	3 cut(s)	71, 1250, 1775
BmiI	GGNNCC	9 cut(s)	72, 320, 607, 936, 1336, 1448, 1777, 1854, 2911
BmrFI	CCNGG	5 cut(s)	126, 1341, 2209, 2804, 2805
BmrI	ACTGGG	1 cut(s)	963
BmsI	GCATC	3 cut(s)	237, 1423, 2071
BmuI	ACTGGG	1 cut(s)	963
BpiI	GAAGAC	1 cut(s)	546
BplI	GAGNNNNNCTC	2 cut(s)	1853, 1885
BpmI	CTGGAG	1 cut(s)	2001
Bpu10I	CCTNAGC	5 cut(s)	664, 903, 1170, 1183, 2040
Bpu1102I	GCTNAGC	1 cut(s)	300
BpuMI	CCSGG	3 cut(s)	126, 2804, 2805
BsaBI	GATNNNNATC	1 cut(s)	165
BsaHI	GRCGYC	1 cut(s)	606
BsaI	GGTCTC	1 cut(s)	2457
BsaJI	CCNNGG	8 cut(s)	291, 583, 1339, 1340, 1624, 2803, 2804, 2925
BsaXI	ACNNNNNCTCC	2 cut(s)	1222, 1252
Bse1I	ACTGG	4 cut(s)	958, 1635, 1709, 1777
Bse3DI	GCAATG	1 cut(s)	2175
Bse8I	GATNNNNATC	1 cut(s)	165
BseBI	CCWGG	2 cut(s)	1341, 2209
BseDI	CCNNGG	8 cut(s)	291, 583, 1339, 1340, 1624, 2803, 2804, 2925
BseGI	GGATG	8 cut(s)	25, 121, 277, 898, 1438, 2096, 2455, 2731
BseJI	GATNNNNATC	1 cut(s)	165
BseMI	GCAATG	1 cut(s)	2175
BseMII	CTCAG	9 cut(s)	375, 450, 609, 678, 771, 841, 894, 1161, 2887
BseNI	ACTGG	4 cut(s)	958, 1635, 1709, 1777
BseRI	GAGGAG	2 cut(s)	699, 1154
BseXI	GCAGC	4 cut(s)	771, 1153, 1807, 1810
BseYI	CCCAGC	2 cut(s)	570, 907
BsgI	GTGCAG	1 cut(s)	869
Bsh1236I	CGCG	2 cut(s)	85, 1276
BshFI	GGCC	6 cut(s)	399, 669, 836, 1145, 1251, 2304
BshNI	GGYRCC	6 cut(s)	318, 605, 1334, 1446, 1852, 2909
BsiHKAI	GWGCWC	1 cut(s)	2583
BsiHKCI	CYCGRG	1 cut(s)	2803
BsiSI	CCGG	3 cut(s)	126, 1319, 2804
BslFI	GGGAC	2 cut(s)	2509, 2786
BsmAI	GTCTC	3 cut(s)	968, 2457, 2825
BsmFI	GGGAC	2 cut(s)	2509, 2786
BsmI	GAATGC	2 cut(s)	1001, 2775
BsnI	GGCC	6 cut(s)	399, 669, 836, 1145, 1251, 2304
Bso31I	GGTCTC	1 cut(s)	2457
BsoBI	CYCGRG	1 cut(s)	2803
Bsp1286I	GDGCHC	1 cut(s)	2583
Bsp1720I	GCTNAGC	1 cut(s)	300
BspACI	CCGC	3 cut(s)	420, 1276, 1923
BspANI	GGCC	6 cut(s)	399, 669, 836, 1145, 1251, 2304
BspCNI	CTCAG	9 cut(s)	374, 451, 610, 677, 772, 840, 895, 1162, 2886
BspFNI	CGCG	2 cut(s)	85, 1276
BspLI	GGNNCC	9 cut(s)	72, 320, 607, 936, 1336, 1448, 1777, 1854, 2911
BspMAI	CTGCAG	1 cut(s)	1861
BspMI	ACCTGC	3 cut(s)	808, 1378, 1448
BspPI	GGATC	3 cut(s)	929, 942, 2509
BspQI	GCTCTTC	1 cut(s)	2804
BspT107I	GGYRCC	6 cut(s)	318, 605, 1334, 1446, 1852, 2909
BspTNI	GGTCTC	1 cut(s)	2457
BsrDI	GCAATG	1 cut(s)	2175
BsrI	ACTGG	4 cut(s)	958, 1635, 1709, 1777
BssECI	CCNNGG	8 cut(s)	291, 583, 1339, 1340, 1624, 2803, 2804, 2925
BssNI	GRCGYC	1 cut(s)	606
BssT1I	CCWWGG	4 cut(s)	291, 583, 1624, 2925
Bst2UI	CCWGG	2 cut(s)	1341, 2209
Bst4CI	ACNGT	9 cut(s)	550, 681, 1744, 2158, 2179, 2619, 2662, 2800, 2941
Bst6I	CTCTTC	4 cut(s)	1398, 2409, 2804, 2841
BstACI	GRCGYC	1 cut(s)	606
BstAPI	GCANNNNNTGC	3 cut(s)	768, 1577, 1865
BstC8I	GCNNGC	5 cut(s)	117, 1333, 1857, 2135, 2821
BstENI	CCTNNNNNAGG	1 cut(s)	2859
BstF5I	GGATG	8 cut(s)	25, 121, 277, 898, 1438, 2096, 2455, 2731
BstFNI	CGCG	2 cut(s)	85, 1276
BstH2I	RGCGCY	1 cut(s)	609
BstHHI	GCGC	5 cut(s)	85, 608, 1001, 1276, 2748
BstMAI	GTCTC	3 cut(s)	968, 2457, 2825
BstMWI	GCNNNNNNNGC	9 cut(s)	296, 768, 1172, 1235, 1328, 1577, 1865, 2578, 2820
BstNI	CCWGG	2 cut(s)	1341, 2209
BstNSI	RCATGY	4 cut(s)	119, 747, 892, 2052
BstSCI	CCNGG	5 cut(s)	124, 1339, 2207, 2802, 2803
BstSFI	CTRYAG	3 cut(s)	192, 1233, 1857
BstUI	CGCG	2 cut(s)	85, 1276
BstV1I	GCAGC	4 cut(s)	771, 1153, 1807, 1810
BstV2I	GAAGAC	1 cut(s)	546
BstX2I	RGATCY	2 cut(s)	691, 934
BstYI	RGATCY	2 cut(s)	691, 934
BsuRI	GGCC	6 cut(s)	399, 669, 836, 1145, 1251, 2304
BtsCI	GGATG	8 cut(s)	25, 121, 277, 898, 1438, 2096, 2455, 2731
BtsI	GCAGTG	1 cut(s)	1732
BtsIMutI	CAGTG	8 cut(s)	51, 546, 1191, 1732, 1740, 2511, 2624, 2796
BveI	ACCTGC	3 cut(s)	808, 1378, 1448
Cac8I	GCNNGC	5 cut(s)	117, 1333, 1857, 2135, 2821
CaiI	CAGNNNCTG	2 cut(s)	1193, 1865
CfoI	GCGC	5 cut(s)	85, 608, 1001, 1276, 2748
Cfr13I	GGNCC	3 cut(s)	71, 1250, 1775
Cfr9I	CCCGGG	1 cut(s)	2803
Csp6I	GTAC	5 cut(s)	309, 319, 677, 1447, 2308
CspCI	CAANNNNNGTGG	4 cut(s)	1407, 1442, 1768, 1803
CviQI	GTAC	5 cut(s)	309, 319, 677, 1447, 2308
DinI	GGCGCC	1 cut(s)	607
DraI	TTTAAA	1 cut(s)	1300
DriI	GACNNNNNGTC	1 cut(s)	2943
Eam1104I	CTCTTC	4 cut(s)	1398, 2409, 2804, 2841
Eam1105I	GACNNNNNGTC	1 cut(s)	2943
EarI	CTCTTC	4 cut(s)	1398, 2409, 2804, 2841
Ecl136II	GAGCTC	1 cut(s)	2581
Eco130I	CCWWGG	4 cut(s)	291, 583, 1624, 2925
Eco147I	AGGCCT	4 cut(s)	399, 669, 1145, 2304
Eco24I	GRGCYC	1 cut(s)	2583
Eco31I	GGTCTC	1 cut(s)	2457
Eco47I	GGWCC	2 cut(s)	71, 1775
Eco53kI	GAGCTC	1 cut(s)	2581
Eco57I	CTGAAG	5 cut(s)	303, 540, 941, 1215, 2319
Eco88I	CYCGRG	1 cut(s)	2803
EcoICRI	GAGCTC	1 cut(s)	2581
EcoNI	CCTNNNNNAGG	1 cut(s)	2859
EcoRI	GAATTC	1 cut(s)	2271
EcoRII	CCWGG	2 cut(s)	1339, 2207
EcoT14I	CCWWGG	4 cut(s)	291, 583, 1624, 2925
EcoT22I	ATGCAT	1 cut(s)	894
EcoT38I	GRGCYC	1 cut(s)	2583
EgeI	GGCGCC	1 cut(s)	607
EheI	GGCGCC	1 cut(s)	607
ErhI	CCWWGG	4 cut(s)	291, 583, 1624, 2925
FaqI	GGGAC	2 cut(s)	2509, 2786
FauI	CCCGC	2 cut(s)	1269, 1930
FauNDI	CATATG	1 cut(s)	2228
FbaI	TGATCA	1 cut(s)	1045
Fnu4HI	GCNGC	4 cut(s)	760, 1167, 1821, 1824
FokI	GGATG	8 cut(s)	32, 108, 284, 885, 1445, 2103, 2442, 2738
FriOI	GRGCYC	1 cut(s)	2583
Fsp4HI	GCNGC	4 cut(s)	760, 1167, 1821, 1824
FspAI	RTGCGCAY	1 cut(s)	2747
FspBI	CTAG	9 cut(s)	216, 584, 1031, 1077, 1218, 1556, 2360, 2411, 2475
FspI	TGCGCA	1 cut(s)	2747
GlaI	GCGC	5 cut(s)	84, 607, 1000, 1275, 2747
GluI	GCNGC	4 cut(s)	760, 1167, 1821, 1824
GsaI	CCCAGC	2 cut(s)	574, 911
GsuI	CTGGAG	1 cut(s)	2001
HaeII	RGCGCY	1 cut(s)	609
HaeIII	GGCC	6 cut(s)	399, 669, 836, 1145, 1251, 2304
HapII	CCGG	3 cut(s)	126, 1319, 2804
HhaI	GCGC	5 cut(s)	85, 608, 1001, 1276, 2748
Hin1I	GRCGYC	1 cut(s)	606
Hin6I	GCGC	5 cut(s)	83, 606, 999, 1274, 2746
HinP1I	GCGC	5 cut(s)	83, 606, 999, 1274, 2746
HincII	GTYRAC	1 cut(s)	2188
HindII	GTYRAC	1 cut(s)	2188
HpaII	CCGG	3 cut(s)	126, 1319, 2804
Hpy166II	GTNNAC	6 cut(s)	786, 1040, 1413, 2188, 2509, 2894
Hpy8I	GTNNAC	6 cut(s)	786, 1040, 1413, 2188, 2509, 2894
HpyCH4III	ACNGT	9 cut(s)	550, 681, 1744, 2158, 2179, 2619, 2662, 2800, 2941
HpyCH4IV	ACGT	2 cut(s)	138, 1713
HpyF10VI	GCNNNNNNNGC	9 cut(s)	296, 768, 1172, 1235, 1328, 1577, 1865, 2578, 2820
HpySE526I	ACGT	2 cut(s)	138, 1713
Hsp92I	GRCGYC	1 cut(s)	606
HspAI	GCGC	5 cut(s)	83, 606, 999, 1274, 2746
KasI	GGCGCC	1 cut(s)	605
KpnI	GGTACC	2 cut(s)	322, 1450
Ksp22I	TGATCA	1 cut(s)	1045
LguI	GCTCTTC	1 cut(s)	2804
LmnI	GCTCC	6 cut(s)	309, 1243, 1279, 1321, 1982, 2856
Lsp1109I	GCAGC	4 cut(s)	771, 1153, 1807, 1810
LweI	GCATC	3 cut(s)	237, 1423, 2071
MaeI	CTAG	9 cut(s)	216, 584, 1031, 1077, 1218, 1556, 2360, 2411, 2475
MaeII	ACGT	2 cut(s)	138, 1713
MaeIII	GTNAC	4 cut(s)	529, 544, 1189, 2935
MflI	RGATCY	2 cut(s)	691, 934
MhlI	GDGCHC	1 cut(s)	2583
Mly113I	GGCGCC	1 cut(s)	606
MlyI	GAGTC	5 cut(s)	22, 589, 1640, 1871, 2827
MmeI	TCCRAC	6 cut(s)	98, 178, 1378, 1689, 2695, 2940
Mph1103I	ATGCAT	1 cut(s)	894
MroXI	GAANNNNTTC	3 cut(s)	63, 356, 2271
MslI	CAYNNNNRTG	2 cut(s)	1587, 2118
MspA1I	CMGCKG	1 cut(s)	1925
MspI	CCGG	3 cut(s)	126, 1319, 2804
MspR9I	CCNGG	5 cut(s)	126, 1341, 2209, 2804, 2805
Mva1269I	GAATGC	2 cut(s)	1001, 2775
MvaI	CCWGG	2 cut(s)	1341, 2209
MvnI	CGCG	2 cut(s)	85, 1276
MwoI	GCNNNNNNNGC	9 cut(s)	296, 768, 1172, 1235, 1328, 1577, 1865, 2578, 2820
NarI	GGCGCC	1 cut(s)	606
NciI	CCSGG	3 cut(s)	126, 2804, 2805
NdeI	CATATG	1 cut(s)	2228
NlaIV	GGNNCC	9 cut(s)	72, 320, 607, 936, 1336, 1448, 1777, 1854, 2911
NmuCI	GTSAC	3 cut(s)	544, 1189, 2935
NsbI	TGCGCA	1 cut(s)	2747
NsiI	ATGCAT	1 cut(s)	894
NspI	RCATGY	4 cut(s)	119, 747, 892, 2052
PaeI	GCATGC	1 cut(s)	119
PaqCI	CACCTGC	2 cut(s)	808, 1448
PasI	CCCWGGG	1 cut(s)	1340
PceI	AGGCCT	4 cut(s)	399, 669, 1145, 2304
PciI	ACATGT	1 cut(s)	2048
PciSI	GCTCTTC	1 cut(s)	2804
PctI	GAATGC	2 cut(s)	1001, 2775
PdmI	GAANNNNTTC	3 cut(s)	63, 356, 2271
PfeI	GAWTC	9 cut(s)	775, 916, 1128, 1379, 1873, 1886, 2335, 2363, 2386
PkrI	GCNGC	4 cut(s)	761, 1168, 1822, 1825
PleI	GAGTC	5 cut(s)	22, 589, 1639, 1870, 2827
PluTI	GGCGCC	1 cut(s)	609
PpsI	GAGTC	5 cut(s)	22, 589, 1639, 1870, 2827
PscI	ACATGT	1 cut(s)	2048
Psp124BI	GAGCTC	1 cut(s)	2583
Psp6I	CCWGG	2 cut(s)	1339, 2207
PspFI	CCCAGC	2 cut(s)	570, 907
PspGI	CCWGG	2 cut(s)	1339, 2207
PspN4I	GGNNCC	9 cut(s)	72, 320, 607, 936, 1336, 1448, 1777, 1854, 2911
PspPI	GGNCC	3 cut(s)	71, 1250, 1775
PstI	CTGCAG	1 cut(s)	1861
PstNI	CAGNNNCTG	2 cut(s)	1193, 1865
PsuI	RGATCY	2 cut(s)	691, 934
RsaI	GTAC	5 cut(s)	310, 320, 678, 1448, 2309
RsaNI	GTAC	5 cut(s)	309, 319, 677, 1447, 2308
RseI	CAYNNNNRTG	2 cut(s)	1587, 2118
SacI	GAGCTC	1 cut(s)	2583
SapI	GCTCTTC	1 cut(s)	2804
SatI	GCNGC	4 cut(s)	760, 1167, 1821, 1824
Sau96I	GGNCC	3 cut(s)	71, 1250, 1775
SchI	GAGTC	5 cut(s)	22, 589, 1640, 1871, 2827
ScrFI	CCNGG	5 cut(s)	126, 1341, 2209, 2804, 2805
SduI	GDGCHC	1 cut(s)	2583
SfaNI	GCATC	3 cut(s)	237, 1423, 2071
SfcI	CTRYAG	3 cut(s)	192, 1233, 1857
SfoI	GGCGCC	1 cut(s)	607
SinI	GGWCC	2 cut(s)	71, 1775
SmaI	CCCGGG	1 cut(s)	2805
SmiMI	CAYNNNNRTG	2 cut(s)	1587, 2118
SphI	GCATGC	1 cut(s)	119
SseBI	AGGCCT	4 cut(s)	399, 669, 1145, 2304
SsiI	CCGC	3 cut(s)	420, 1276, 1923
SspDI	GGCGCC	1 cut(s)	605
SspI	AATATT	1 cut(s)	1266
SspMI	CTAG	9 cut(s)	216, 584, 1031, 1077, 1218, 1556, 2360, 2411, 2475
SstI	GAGCTC	1 cut(s)	2583
StuI	AGGCCT	4 cut(s)	399, 669, 1145, 2304
StyD4I	CCNGG	5 cut(s)	124, 1339, 2207, 2802, 2803
StyI	CCWWGG	4 cut(s)	291, 583, 1624, 2925
TaaI	ACNGT	9 cut(s)	550, 681, 1744, 2158, 2179, 2619, 2662, 2800, 2941
TaiI	ACGT	2 cut(s)	141, 1716
TaqII	GACCGA	1 cut(s)	1956
TatI	WGTACW	1 cut(s)	676
TfiI	GAWTC	9 cut(s)	775, 916, 1128, 1379, 1873, 1886, 2335, 2363, 2386
TscAI	CASTG	8 cut(s)	51, 553, 1198, 1732, 1747, 2511, 2624, 2803
TseFI	GTSAC	3 cut(s)	544, 1189, 2935
TseI	GCWGC	4 cut(s)	759, 1166, 1820, 1823
Tsp45I	GTSAC	3 cut(s)	544, 1189, 2935
TspGWI	ACGGA	2 cut(s)	296, 2738
TspMI	CCCGGG	1 cut(s)	2803
TspRI	CASTG	8 cut(s)	51, 553, 1198, 1732, 1747, 2511, 2624, 2803
VpaK11BI	GGWCC	2 cut(s)	71, 1775
XagI	CCTNNNNNAGG	1 cut(s)	2859
XapI	RAATTY	6 cut(s)	383, 1962, 2016, 2271, 2782, 2902
XbaI	TCTAGA	1 cut(s)	1217
XceI	RCATGY	4 cut(s)	119, 747, 892, 2052
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2205, 2923
XmaI	CCCGGG	1 cut(s)	2803
XmaJI	CCTAGG	1 cut(s)	583
XmnI	GAANNNNTTC	3 cut(s)	63, 356, 2271
XspI	CTAG	9 cut(s)	216, 584, 1031, 1077, 1218, 1556, 2360, 2411, 2475
Zsp2I	ATGCAT	1 cut(s)	894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.