FvH4_4g12130

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0012606
Physical Location & Seq
Reverse (-)
15808479 .. 15816934
8456 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12130.t1

Sequence Viewer

Length: 2202 bp
ATGCAGCCACTAAGCATTGTTGTTATTGACGAGGCTGCACAACTAACCAAGTGTGAGTCAACAATATCCCTGCAACTTCCAGGTGTGAAGCATGCTGTTCTTGCTGGTGACGAATGTCAGTTACCAGCTACGGTAACAAGCAATGTTTATGCTGAAGCTGGTTTTGCAAGAAGTTCGTTTGAGAGGATCCTGGATGCTCCAAATGTAAAACGAAGAAGCCACGAGAAGCACTATCTTCCAGGAGCAATGTTTGGTCTGCGTTCTTTTATAAATGTGATTGGTGGAAGAGAGGAGAAAGATGAGGATGGTCATAGTCAGAAGAATATGGTGGAGGTTGCTAATATTTCAAAAATGCTGCTGAATCTGTACAAAGGATGGGTTGAATTGAAACAGAGACTCAGTATTGGTATAGTTTCTCCCTATGCTGCTCAAGTAGTCACAATCCAGGACAGAGTGGGTGAGAAATATAATAAGCTTGATGGCTTTGTAGTGAAGAAGTCAGTGCCACATCTTCTACTGAATCTTTCCAGTGGTTGGAGACCTAAGAAGCAAAATTTTGAGACTGTTTGTGGTAGCTCTTCCATGATCTTGAAGAAGTTTAAGGTTGAAGGGCTATACTCTGTTTGCACTAACGATACTGCAAAGGACTTGCACTATGTTCAAGTATTAAACATCTGGGACATCTTATTTCTGGAGGATATTCCAAAGTTGATAAACCGCCTGGATAGTATTTTCATCCAATATACTGATGACTTTATCAATCTTTGGAAGGAGAAATGTCTTGATGGTGATCTAGAGGTTCCAAAAAGCTGGCCACCCTCGTTGCAATATTCCCAGTTTAAGGATGTTAACATCAATGAAGCTCAGAGTGATTTTGTTGGTGACACTTCTGATTGTAGAAGCTATGTTGAGCATATTCCAAAGTTGATGAACTGCCGGGATAGTATTTTCCACAGATATACTGATGACTTTATTAGTCTTTGCAAGGAGAAATGTCTTGATGGTGATCTAGAGGTTCCAAAAAGCTGGCTACCCTTGTTGCAATATTCCCAGTTTAAGGATCTTAACATCAGTGAAGCTCAGAGTGATTTTGTCGGTGACACTTCTGATTGTAGAAGCTATGTTGAGCATGTAACAAGCACCGAGATTCCCAAATATTTTAAGGGTTTGTGGCATGGAACCACAATTCTGTGGGTTCGGCTTTCGGCAACTGAGCTAATAATTGGAGTTGATTCGCTGACGACTACTACATATATAGAGGATGACCCAAATGACCCAAATAACAGGAGGAAGTATGAGATTATGTGGAGTGAAGTTGAAGATAAATTTATAGAAATCATTCCAAAAGTCTATGCAACACTTAGTGGTGATGGGGAGAGGTGCTTGAAGATGGTTGAGCATGTTCGTGATAAAATGAAGGGACACAGAGACGATGGAGTCACACCTATTCTTGGATTGGTTGGCTTGGCTGCCACTGAATACTTTCGTCAAATCTGTCCTTTTAACCCTGATAAAGATAAACTCTCCACTGTCTTCTTATGTGCTTGGATTTCTCAATTAAAGGAGTATCATGTTATTGTGGTGGCGGATGTGCATGAAGCTCCGCTCCTAATAGAAGAGACAGTTTTCGGCAGTGGAAGTGGTTTCAGCCAAGCTGTATCTGAGTTAAGAGAGTTAACAACACCAATAGACGTACCTGTTGTAAAGGACAAAATGATAAGAGCAGAATGCAGAGATCCTCACACTGGTGGACGTATTCAAGTCATTTCTTTGAAGGATGAGAGATCCGTGTTGGAGTATCAAGGATATTTGTTGGACGAGCTTGATAACCCTGTTTATGCAGACATAGTTTTTGATAACAGAAATATGTTTGTTGTCATTCGTAAGAGAGATGAAAAATTCTTGAATTCGATAGACTTGGCGAGAGACCTAAAAAGATTTGACACCAATATTGCAAGAGATCAAATCCACTGGTTATTCCGTGGGAAGACATTTCTGGTGTACCTTGTTAAACTCTCATCATCAGATTGTTGTGATAGCTGGTACACTTCTTGTATGGATTACAAAAAGCCTTTCCGGTGTCAGCCATATTACAAAGAAGACCGTTCTAAAACTGACTATTATTACCTCACATATGCTAGTCGTAAGATACTTGATCGAGCACGGAGCATGAAGATCATTGATGATTTGGTAGACCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

734

Amino Acids

84.13

Weight (kDa)

5.6

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 4 - 47 5.6e-10 AAA domain
AAA_12 PF13087 65 - 158 1e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 269
AasI GACNNNNNNGTC 1 cut(s) 1436
AccB7I CCANNNNNTGG 1 cut(s) 534
AccBSI CCGCTC 1 cut(s) 1606
AccI GTMKAC 1 cut(s) 2193
AciI CCGC 3 cut(s) 718, 1586, 1604
AclWI GGATC 5 cut(s) 181, 194, 1068, 1730, 1779
AcoI YGGCCR 1 cut(s) 812
AcsI RAATTY 4 cut(s) 553, 1325, 1898, 1906
AcuI CTGAAG 1 cut(s) 174
AdeI CACNNNGTG 1 cut(s) 1364
AfaI GTAC 4 cut(s) 368, 1695, 2003, 2045
AfiI CCNNNNNNNGG 5 cut(s) 534, 841, 1057, 1451, 1745
AjnI CCWGG 5 cut(s) 79, 189, 238, 444, 720
AleI CACNNNNGTG 1 cut(s) 1746
Alw21I GWGCWC 1 cut(s) 2164
Alw26I GTCTC 6 cut(s) 388, 532, 554, 1422, 1613, 1920
AlwI GGATC 5 cut(s) 181, 194, 1068, 1730, 1779
AoxI GGCC 1 cut(s) 812
ApeKI GCWGC 5 cut(s) 4, 35, 355, 425, 1469
ApoI RAATTY 4 cut(s) 553, 1325, 1898, 1906
ArsI GACNNNNNNTTYG 2 cut(s) 1835, 1867
Asp700I GAANNNNTTC 2 cut(s) 1338, 1482
AsuC2I CCSGG 1 cut(s) 938
AsuHPI GGTGA 7 cut(s) 119, 470, 800, 893, 1016, 1109, 1379
BalI TGGCCA 1 cut(s) 814
BamHI GGATCC 1 cut(s) 186
BauI CACGAG 1 cut(s) 221
BbsI GAAGAC 3 cut(s) 1525, 1994, 2106
Bbv12I GWGCWC 1 cut(s) 2164
BbvI GCAGC 5 cut(s) 16, 22, 342, 412, 1456
BccI CCATC 8 cut(s) 299, 369, 473, 779, 995, 1364, 1384, 1427
BcgI CGANNNNNNTGC 2 cut(s) 156, 190
BciT130I CCWGG 5 cut(s) 81, 191, 240, 446, 722
BcnI CCSGG 1 cut(s) 938
BcoDI GTCTC 6 cut(s) 388, 532, 554, 1422, 1613, 1920
BfaI CTAG 3 cut(s) 794, 1010, 2139
BisI GCNGC 5 cut(s) 5, 36, 356, 426, 1470
BlsI GCNGC 5 cut(s) 6, 37, 357, 427, 1471
Bme1390I CCNGG 6 cut(s) 81, 191, 240, 446, 722, 938
BmiI GGNNCC 4 cut(s) 188, 801, 1017, 1180
BmrFI CCNGG 6 cut(s) 81, 191, 240, 446, 722, 938
BmrI ACTGGG 2 cut(s) 829, 1045
BmsI GCATC 1 cut(s) 184
BmuI ACTGGG 2 cut(s) 829, 1045
BoxI GACNNNNGTC 1 cut(s) 114
BpiI GAAGAC 3 cut(s) 1525, 1994, 2106
BpmI CTGGAG 1 cut(s) 713
BpuEI CTTGAG 1 cut(s) 414
BpuMI CCSGG 1 cut(s) 938
BsaBI GATNNNNATC 2 cut(s) 789, 1005
BsaI GGTCTC 2 cut(s) 532, 1920
BsaJI CCNNGG 1 cut(s) 1981
BsaWI WCCGGW 1 cut(s) 2076
Bsc4I CCNNNNNNNGG 5 cut(s) 534, 841, 1057, 1451, 1745
Bse1I ACTGG 5 cut(s) 528, 835, 1051, 1750, 1976
Bse3DI GCAATG 2 cut(s) 148, 252
Bse8I GATNNNNATC 2 cut(s) 789, 1005
BseBI CCWGG 5 cut(s) 81, 191, 240, 446, 722
BseDI CCNNGG 1 cut(s) 1981
BseGI GGATG 8 cut(s) 199, 310, 380, 735, 850, 1267, 1594, 1783
BseJI GATNNNNATC 2 cut(s) 789, 1005
BseLI CCNNNNNNNGG 5 cut(s) 534, 841, 1057, 1451, 1745
BseMI GCAATG 2 cut(s) 148, 252
BseMII CTCAG 5 cut(s) 412, 878, 1094, 1203, 1653
BseNI ACTGG 5 cut(s) 528, 835, 1051, 1750, 1976
BseRI GAGGAG 1 cut(s) 305
BseXI GCAGC 5 cut(s) 16, 22, 342, 412, 1456
BsgI GTGCAG 1 cut(s) 21
BshFI GGCC 1 cut(s) 814
BsiHKAI GWGCWC 1 cut(s) 2164
BsiSI CCGG 2 cut(s) 937, 2077
BslFI GGGAC 2 cut(s) 692, 1434
BslI CCNNNNNNNGG 5 cut(s) 534, 841, 1057, 1451, 1745
BsmAI GTCTC 6 cut(s) 388, 532, 554, 1422, 1613, 1920
BsmBI CGTCTC 1 cut(s) 1422
BsmFI GGGAC 2 cut(s) 692, 1434
BsmI GAATGC 1 cut(s) 1733
BsnI GGCC 1 cut(s) 814
Bso31I GGTCTC 2 cut(s) 532, 1920
Bsp1286I GDGCHC 1 cut(s) 2164
Bsp1407I TGTACA 1 cut(s) 366
BspACI CCGC 3 cut(s) 718, 1586, 1604
BspANI GGCC 1 cut(s) 814
BspCNI CTCAG 5 cut(s) 411, 877, 1093, 1204, 1654
BspLI GGNNCC 4 cut(s) 188, 801, 1017, 1180
BspPI GGATC 5 cut(s) 181, 194, 1068, 1730, 1779
BspQI GCTCTTC 1 cut(s) 583
BspTNI GGTCTC 2 cut(s) 532, 1920
BsrBI CCGCTC 1 cut(s) 1606
BsrDI GCAATG 2 cut(s) 148, 252
BsrGI TGTACA 1 cut(s) 366
BsrI ACTGG 5 cut(s) 528, 835, 1051, 1750, 1976
BssECI CCNNGG 1 cut(s) 1981
BssSI CACGAG 1 cut(s) 221
Bst2BI CACGAG 1 cut(s) 221
Bst2UI CCWGG 5 cut(s) 81, 191, 240, 446, 722
Bst4CI ACNGT 5 cut(s) 133, 565, 1531, 1624, 2105
Bst6I CTCTTC 3 cut(s) 280, 583, 1611
BstAUI TGTACA 1 cut(s) 366
BstC8I GCNNGC 3 cut(s) 93, 812, 1028
BstDEI CTNAG 9 cut(s) 11, 398, 543, 864, 1080, 1212, 1361, 1662, 2199
BstDSI CCRYGG 1 cut(s) 1981
BstF5I GGATG 8 cut(s) 199, 310, 380, 735, 850, 1267, 1594, 1783
BstMAI GTCTC 6 cut(s) 388, 532, 554, 1422, 1613, 1920
BstMWI GCNNNNNNNGC 2 cut(s) 101, 164
BstNI CCWGG 5 cut(s) 81, 191, 240, 446, 722
BstNSI RCATGY 3 cut(s) 95, 1133, 1403
BstPAI GACNNNNGTC 1 cut(s) 114
BstSCI CCNGG 6 cut(s) 79, 189, 238, 444, 720, 936
BstV1I GCAGC 5 cut(s) 16, 22, 342, 412, 1456
BstV2I GAAGAC 3 cut(s) 1525, 1994, 2106
BstX2I RGATCY 4 cut(s) 186, 1060, 1735, 1784
BstXI CCANNNNNNTGG 2 cut(s) 810, 1026
BstYI RGATCY 4 cut(s) 186, 1060, 1735, 1784
BsuRI GGCC 1 cut(s) 814
BtgI CCRYGG 1 cut(s) 1981
BtsCI GGATG 8 cut(s) 199, 310, 380, 735, 850, 1267, 1594, 1783
BtsI GCAGTG 1 cut(s) 1639
BtsIMutI CAGTG 8 cut(s) 507, 535, 1078, 1473, 1527, 1639, 1743, 1969
Cac8I GCNNGC 3 cut(s) 93, 812, 1028
Csp6I GTAC 4 cut(s) 367, 1694, 2002, 2044
CspCI CAANNNNNGTGG 2 cut(s) 804, 839
CviAII CATG 8 cut(s) 92, 583, 1130, 1175, 1400, 1571, 1595, 2170
CviQI GTAC 4 cut(s) 367, 1694, 2002, 2044
DdeI CTNAG 9 cut(s) 11, 398, 543, 864, 1080, 1212, 1361, 1662, 2199
DraIII CACNNNGTG 1 cut(s) 1364
DrdI GACNNNNNNGTC 1 cut(s) 1436
DseDI GACNNNNNNGTC 1 cut(s) 1436
EaeI YGGCCR 1 cut(s) 812
Eam1104I CTCTTC 3 cut(s) 280, 583, 1611
EarI CTCTTC 3 cut(s) 280, 583, 1611
EciI GGCGGA 1 cut(s) 1601
Eco31I GGTCTC 2 cut(s) 532, 1920
Eco57I CTGAAG 1 cut(s) 174
EcoRI GAATTC 1 cut(s) 1906
EcoRII CCWGG 5 cut(s) 79, 189, 238, 444, 720
Esp3I CGTCTC 1 cut(s) 1422
FaeI CATG 8 cut(s) 95, 586, 1133, 1178, 1403, 1574, 1598, 2173
FaqI GGGAC 2 cut(s) 692, 1434
FatI CATG 8 cut(s) 91, 582, 1129, 1174, 1399, 1570, 1594, 2169
FauNDI CATATG 1 cut(s) 2134
FblI GTMKAC 1 cut(s) 2193
Fnu4HI GCNGC 5 cut(s) 5, 36, 356, 426, 1470
FokI GGATG 8 cut(s) 206, 317, 387, 722, 857, 1274, 1601, 1790
Fsp4HI GCNGC 5 cut(s) 5, 36, 356, 426, 1470
FspBI CTAG 3 cut(s) 794, 1010, 2139
GluI GCNGC 5 cut(s) 5, 36, 356, 426, 1470
GsuI CTGGAG 1 cut(s) 713
HaeIII GGCC 1 cut(s) 814
HapII CCGG 2 cut(s) 937, 2077
Hin1II CATG 8 cut(s) 95, 586, 1133, 1178, 1403, 1574, 1598, 2173
HincII GTYRAC 3 cut(s) 60, 850, 1677
HindII GTYRAC 3 cut(s) 60, 850, 1677
HindIII AAGCTT 1 cut(s) 473
HinfI GANTC 7 cut(s) 56, 361, 396, 520, 1147, 1232, 1437
HpaI GTTAAC 2 cut(s) 850, 1677
HpaII CCGG 2 cut(s) 937, 2077
HphI GGTGA 7 cut(s) 119, 470, 800, 893, 1016, 1109, 1379
Hpy166II GTNNAC 7 cut(s) 60, 850, 1677, 1751, 2002, 2046, 2194
Hpy188I TCNGA 7 cut(s) 318, 867, 892, 1083, 1108, 1663, 2026
Hpy188III TCNNGA 8 cut(s) 589, 692, 782, 794, 998, 1010, 1406, 1903
Hpy8I GTNNAC 7 cut(s) 60, 850, 1677, 1751, 2002, 2046, 2194
HpyAV CCTTC 4 cut(s) 602, 763, 1411, 1768
HpyCH4III ACNGT 5 cut(s) 133, 565, 1531, 1624, 2105
HpyCH4IV ACGT 2 cut(s) 1692, 1753
HpyF10VI GCNNNNNNNGC 2 cut(s) 101, 164
HpyF3I CTNAG 9 cut(s) 11, 398, 543, 864, 1080, 1212, 1361, 1662, 2199
HpySE526I ACGT 2 cut(s) 1692, 1753
Hsp92II CATG 8 cut(s) 95, 586, 1133, 1178, 1403, 1574, 1598, 2173
KspAI GTTAAC 2 cut(s) 850, 1677
LguI GCTCTTC 1 cut(s) 583
LmnI GCTCC 5 cut(s) 202, 242, 1606, 1611, 2166
Lsp1109I GCAGC 5 cut(s) 16, 22, 342, 412, 1456
LweI GCATC 1 cut(s) 184
MaeI CTAG 3 cut(s) 794, 1010, 2139
MaeII ACGT 2 cut(s) 1692, 1753
MaeIII GTNAC 8 cut(s) 107, 120, 133, 436, 881, 1097, 1132, 1438
MbiI CCGCTC 1 cut(s) 1606
MflI RGATCY 4 cut(s) 186, 1060, 1735, 1784
MhlI GDGCHC 1 cut(s) 2164
MlsI TGGCCA 1 cut(s) 814
MluCI AATT 8 cut(s) 383, 553, 1185, 1221, 1325, 1556, 1898, 1906
MluNI TGGCCA 1 cut(s) 814
MlyI GAGTC 3 cut(s) 65, 390, 1446
MmeI TCCRAC 3 cut(s) 515, 1773, 1794
Mox20I TGGCCA 1 cut(s) 814
MroXI GAANNNNTTC 2 cut(s) 1338, 1482
MscI TGGCCA 1 cut(s) 814
MslI CAYNNNNRTG 2 cut(s) 1404, 1746
Msp20I TGGCCA 1 cut(s) 814
MspI CCGG 2 cut(s) 937, 2077
MspR9I CCNGG 6 cut(s) 81, 191, 240, 446, 722, 938
Mva1269I GAATGC 1 cut(s) 1733
MvaI CCWGG 5 cut(s) 81, 191, 240, 446, 722
MwoI GCNNNNNNNGC 2 cut(s) 101, 164
NciI CCSGG 1 cut(s) 938
NdeI CATATG 1 cut(s) 2134
NlaIII CATG 8 cut(s) 95, 586, 1133, 1178, 1403, 1574, 1598, 2173
NlaIV GGNNCC 4 cut(s) 188, 801, 1017, 1180
NmuCI GTSAC 5 cut(s) 107, 436, 881, 1097, 1438
NspI RCATGY 3 cut(s) 95, 1133, 1403
OliI CACNNNNGTG 1 cut(s) 1746
PaeI GCATGC 1 cut(s) 95
PciSI GCTCTTC 1 cut(s) 583
PctI GAATGC 1 cut(s) 1733
PdmI GAANNNNTTC 2 cut(s) 1338, 1482
PfeI GAWTC 4 cut(s) 361, 520, 1147, 1232
PflMI CCANNNNNTGG 1 cut(s) 534
PfoI TCCNGGA 3 cut(s) 189, 238, 444
PkrI GCNGC 5 cut(s) 6, 37, 357, 427, 1471
PleI GAGTC 3 cut(s) 64, 390, 1445
PpsI GAGTC 3 cut(s) 64, 390, 1445
PshAI GACNNNNGTC 1 cut(s) 114
PsiI TTATAA 1 cut(s) 269
Psp6I CCWGG 5 cut(s) 79, 189, 238, 444, 720
PspGI CCWGG 5 cut(s) 79, 189, 238, 444, 720
PspN4I GGNNCC 4 cut(s) 188, 801, 1017, 1180
PsuI RGATCY 4 cut(s) 186, 1060, 1735, 1784
RsaI GTAC 4 cut(s) 368, 1695, 2003, 2045
RsaNI GTAC 4 cut(s) 367, 1694, 2002, 2044
RseI CAYNNNNRTG 2 cut(s) 1404, 1746
SapI GCTCTTC 1 cut(s) 583
SatI GCNGC 5 cut(s) 5, 36, 356, 426, 1470
SchI GAGTC 3 cut(s) 65, 390, 1446
ScrFI CCNGG 6 cut(s) 81, 191, 240, 446, 722, 938
SduI GDGCHC 1 cut(s) 2164
SfaNI GCATC 1 cut(s) 184
SmiMI CAYNNNNRTG 2 cut(s) 1404, 1746
SmlI CTYRAG 1 cut(s) 429
SmoI CTYRAG 1 cut(s) 429
SphI GCATGC 1 cut(s) 95
Sse9I AATT 8 cut(s) 383, 553, 1185, 1221, 1325, 1556, 1898, 1906
SsiI CCGC 3 cut(s) 718, 1586, 1604
SspI AATATT 5 cut(s) 343, 830, 1046, 1157, 1951
SspMI CTAG 3 cut(s) 794, 1010, 2139
StyD4I CCNGG 6 cut(s) 79, 189, 238, 444, 720, 936
TaaI ACNGT 5 cut(s) 133, 565, 1531, 1624, 2105
TaiI ACGT 2 cut(s) 1695, 1756
TaqI TCGA 2 cut(s) 1910, 2158
TasI AATT 8 cut(s) 383, 553, 1185, 1221, 1325, 1556, 1898, 1906
TatI WGTACW 1 cut(s) 366
TfiI GAWTC 4 cut(s) 361, 520, 1147, 1232
TscAI CASTG 8 cut(s) 507, 535, 1078, 1480, 1534, 1639, 1750, 1976
TseFI GTSAC 5 cut(s) 107, 436, 881, 1097, 1438
TseI GCWGC 5 cut(s) 4, 35, 355, 425, 1469
Tsp45I GTSAC 5 cut(s) 107, 436, 881, 1097, 1438
TspDTI ATGAA 7 cut(s) 724, 873, 944, 1430, 1611, 1908, 2186
TspGWI ACGGA 3 cut(s) 1777, 1970, 2179
TspRI CASTG 8 cut(s) 507, 535, 1078, 1480, 1534, 1639, 1750, 1976
Van91I CCANNNNNTGG 1 cut(s) 534
XapI RAATTY 4 cut(s) 553, 1325, 1898, 1906
XbaI TCTAGA 2 cut(s) 793, 1009
XceI RCATGY 3 cut(s) 95, 1133, 1403
XmiI GTMKAC 1 cut(s) 2193
XmnI GAANNNNTTC 2 cut(s) 1338, 1482
XspI CTAG 3 cut(s) 794, 1010, 2139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.