Rh5DG408700

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0012606
Physical Location & Seq
Forward (+)
64697290 .. 64716078
18789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG408700.1

Sequence Viewer

Length: 2004 bp
ATGGTAGGATTTGGAGCCTCGGAGGAGCTGTCCGAATCAGGTCCTAGTTCTGGAAAACTCGGGACGATTCAGTGGGCAAACGAGTTCGACGACTCGGGAAAAAAACCGCTGCACCCGGCGTTAGCTCACGCGTCACGGTGTGCCGAGGTGTTGGTAAAGAATGACGCCTCGAGGGAGCTGAGGACCAAGGACGGTCATGAGGCGCAGCTAGCACTGGAGTTGTCGCTTAGTGAGGCTAGGATCTGTAGATACTGGAATCCGAAAGATTTGTCCATGGAAAATTATTACATGAATGAAAAGGATTTGAGCACGGAAAAACTTCTGAGTGAAAAAACCAAGGATTTGAGCACGGAAAAACTTCCGAGTGAAAAAACCAAGGAGATTGCTGACATGGATCCTGTTAAAGGGCGCCTAGCTTATCTGCCTGCTCTACTTATCGCCGCCGCCGAGAAGGTTAACGATTCCGTCTTGGAGTTGCATGATTCCTATTCGGGGGGCAAGGAGAAGGACACTCTCTATGAATGTCTTATAAGAGAGGCTTTGACCCCGGGAGGCCGTACAACGACACCGTTGAGGGCGGCCAAAAGCGCCTCCACGGCGACGGAGGGCGAAAATTCGGAGAGAAGGAAGCTCGTGCTTCGAGAGATAGAGCTGCTTCAGCTCTTCGGAGCTGTTCCTCAGAGCGGTGGTGAGGACAAGAAGGTGGCGAGGAAGCTCGTGCTTCGAGAGATAGAGCTGCTTCAGCTCTTCGGAGCTGTTGCTCAGAGCGGTGGTGGTGGTGGTAGGGAAAAGAAGGTGACTTCGCCACTCATCCGTGCAGCTCAGGGAGGAGACAAAGCTGTTATCCGCCAGCTGCTTCTGAAGACAAATATAGATGTCAACGATGCTGATGCAGATGGAAATTCTGCTCTTCATTGGATACTTGGGTTGTCATGTCCACAACAGTTAAGAAATGTTAACTCAAGCACCGAGGCAAAGGTTCATAAGTACTTCGACTCCGACTCTCATCAAGGATATGTCAAAGGAGTTAAGAAGGGAGCATACCCGAGTCATTTTTGTGCTGCTAAACAACTCAAACGCAAAATCTTTTTTGGAGGACTTCCTTCTTCAGTGGACTCTGATGTTTTGGTAGCTGAGTTTGAAAAAATGTCACCTCAACAACAAGAACAGGAGAAGAATTTTCAATATCAGCTTCCACTGCAGAAGTACAACAAGTATATTATGGGTTCGTGTCATGGAACCACAATTTTGTGGATTCAGCTTCCAACTGAACTACTAGTTGGAGTAGATTCACAACGTACTCGAAAGTATATAGCAAAGGACCCAAAGAACAAGAGGAAGGCCTATGAGCTTTTGGAGAGCGAAATTGAAGATAAGTTTGTAGAAATCATCAAAGGAGTGTATGCAACTCTTTGCGGAGATGGAAAGAGGTGCAATGAAATGGTTGAGTTTGTCCGGGATCAAATGAAGCAATTCATAGATATTGGAGGCATACCTACTCTTGAGCATGTTGGCAAGGCTGCTACAGCATATTTTCATAAGTTCTATCCAATGGACCGTGAAAAAGATCTTGAATCTACAGTCTTCATATGTGCTTGGATGCCTCATGAAAAGAAATATGACGTCATTGAAGTGGGGGATGTGCCTAAAAATGCGCTCTTCCGACAAAATAAGGTTTTCGGAAGTGGAAGCGGCTCCGTCAACATATTAACCGAGTTAAAAGCGTTGGAAGCACCAATAGACGTGAATGTAGTAAAGAATAAATTGATAAGAGCAACACTCACGGATCCTTACACTGGTGGACATCTTCAAGTTTATTCTTTGAAGGATGGGACATGTGTGTCCAAGTATGAAGGAAATTTGATAAATGAGCTGCACAACCCTGAGTATGCAGACATACTTTTTGATGGAAAAAGTATGTTTGTTATAATTCAAACGAGACATGCCGCAATCTTGAGTCCGCAAGACTTAATGGAAGTCCTAGAAAGGACTGCAACTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

667

Amino Acids

74.24

Weight (kDa)

6.48

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 530, 1928
AasI GACNNNNNNGTC 1 cut(s) 1840
AatII GACGTC 1 cut(s) 1626
AbsI CCTCGAGG 1 cut(s) 169
AccB1I GGYRCC 1 cut(s) 408
AccBSI CCGCTC 2 cut(s) 684, 768
AccII CGCG 1 cut(s) 131
AclWI GGATC 6 cut(s) 248, 389, 402, 1467, 1781, 1794
AcoI YGGCCR 1 cut(s) 579
AcsI RAATTY 4 cut(s) 613, 901, 1177, 1858
AcuI CTGAAG 4 cut(s) 641, 725, 881, 1092
AcyI GRCGYC 3 cut(s) 165, 409, 1623
AdeI CACNNNGTG 1 cut(s) 140
AfaI GTAC 4 cut(s) 559, 989, 1208, 1300
AfiI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1796
AflIII ACRYGT 2 cut(s) 129, 1835
AgsI TTSAA 8 cut(s) 1142, 1184, 1370, 1574, 1631, 1811, 1825, 1934
AhlI ACTAGT 1 cut(s) 1276
AjiI CACGTC 1 cut(s) 1744
AjuI GAANNNNNNNTTGG 2 cut(s) 1263, 1295
Alw21I GWGCWC 2 cut(s) 311, 350
Alw26I GTCTC 2 cut(s) 825, 1933
AlwI GGATC 6 cut(s) 248, 389, 402, 1467, 1781, 1794
Ama87I CYCGRG 5 cut(s) 59, 94, 169, 547, 1045
AoxI GGCC 3 cut(s) 553, 579, 1341
ApeKI GCWGC 9 cut(s) 109, 205, 652, 736, 818, 853, 1061, 1520, 1873
ApoI RAATTY 4 cut(s) 613, 901, 1177, 1858
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 1886, 1918
Asp700I GAANNNNTTC 3 cut(s) 318, 357, 1472
AspLEI GCGC 4 cut(s) 205, 411, 590, 1657
AspS9I GGNCC 4 cut(s) 41, 183, 1321, 1555
AsuC2I CCSGG 4 cut(s) 116, 548, 549, 1457
AsuHPI GGTGA 3 cut(s) 701, 808, 1143
AsuNHI GCTAGC 1 cut(s) 208
AvaI CYCGRG 5 cut(s) 59, 94, 169, 547, 1045
AvaII GGWCC 4 cut(s) 41, 183, 1321, 1555
BaeI ACNNNNGTAYC 2 cut(s) 911, 944
BamHI GGATCC 2 cut(s) 394, 1786
BanI GGYRCC 1 cut(s) 408
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
BauI CACGAG 2 cut(s) 632, 716
BbsI GAAGAC 2 cut(s) 869, 1576
Bbv12I GWGCWC 2 cut(s) 311, 350
BbvCI CCTCAGC 1 cut(s) 179
BbvI GCAGC 9 cut(s) 96, 217, 639, 723, 830, 840, 1048, 1507, 1860
BccI CCATC 4 cut(s) 890, 1415, 1823, 1901
BceAI ACGGC 2 cut(s) 540, 612
BcgI CGANNNNNNTGC 2 cut(s) 872, 906
BciVI GTATCC 1 cut(s) 912
BcnI CCSGG 4 cut(s) 116, 548, 549, 1457
BcoDI GTCTC 2 cut(s) 825, 1933
BcuI ACTAGT 1 cut(s) 1276
BfaI CTAG 6 cut(s) 45, 209, 237, 413, 1277, 1982
BfmI CTRYAG 4 cut(s) 244, 1199, 1524, 1578
BfoI RGCGCY 2 cut(s) 412, 591
BfuI GTATCC 1 cut(s) 912
BglI GCCNNNNNGGC 1 cut(s) 596
BglII AGATCT 1 cut(s) 1567
BmcAI AGTACT 1 cut(s) 989
Bme1390I CCNGG 4 cut(s) 116, 548, 549, 1457
Bme18I GGWCC 4 cut(s) 41, 183, 1321, 1555
BmeT110I CYCGRG 5 cut(s) 59, 94, 169, 547, 1045
BmgBI CACGTC 1 cut(s) 1744
BmgT120I GGNCC 4 cut(s) 41, 183, 1321, 1555
BmiI GGNNCC 7 cut(s) 16, 396, 410, 1240, 1323, 1696, 1788
BmrFI CCNGG 4 cut(s) 116, 548, 549, 1457
BmsI GCATC 3 cut(s) 874, 880, 1590
BmtI GCTAGC 1 cut(s) 212
BpiI GAAGAC 2 cut(s) 869, 1576
BplI GAGNNNNNCTC 2 cut(s) 1764, 1796
BpmI CTGGAG 1 cut(s) 236
Bpu10I CCTNAGC 2 cut(s) 179, 822
BpuEI CTTGAG 3 cut(s) 946, 1523, 1975
BpuMI CCSGG 4 cut(s) 116, 548, 549, 1457
BsaHI GRCGYC 3 cut(s) 165, 409, 1623
BsaXI ACNNNNNCTCC 4 cut(s) 14, 44, 980, 1010
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1796
Bse1I ACTGG 3 cut(s) 219, 257, 1801
Bse3DI GCAATG 1 cut(s) 1441
BseGI GGATG 4 cut(s) 810, 1605, 1645, 1834
BseLI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1796
BseMI GCAATG 1 cut(s) 1441
BseMII CTCAG 7 cut(s) 170, 314, 692, 776, 836, 1125, 1875
BseNI ACTGG 3 cut(s) 219, 257, 1801
BseRI GAGGAG 2 cut(s) 38, 843
BseXI GCAGC 9 cut(s) 96, 217, 639, 723, 830, 840, 1048, 1507, 1860
BsgI GTGCAG 3 cut(s) 95, 837, 1859
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 3 cut(s) 555, 581, 1343
BshNI GGYRCC 1 cut(s) 408
BsiHKAI GWGCWC 2 cut(s) 311, 350
BsiHKCI CYCGRG 5 cut(s) 59, 94, 169, 547, 1045
BsiSI CCGG 3 cut(s) 116, 548, 1456
BslFI GGGAC 2 cut(s) 76, 1846
BslI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1796
BsmAI GTCTC 2 cut(s) 825, 1933
BsmFI GGGAC 2 cut(s) 76, 1846
BsnI GGCC 3 cut(s) 555, 581, 1343
BsoBI CYCGRG 5 cut(s) 59, 94, 169, 547, 1045
Bsp1286I GDGCHC 2 cut(s) 311, 350
Bsp143I GATC 5 cut(s) 240, 394, 1459, 1567, 1786
Bsp19I CCATGG 1 cut(s) 273
BspANI GGCC 3 cut(s) 555, 581, 1343
BspCNI CTCAG 7 cut(s) 171, 315, 691, 775, 835, 1126, 1876
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 2 cut(s) 196, 1606
BspLI GGNNCC 7 cut(s) 16, 396, 410, 1240, 1323, 1696, 1788
BspMAI CTGCAG 1 cut(s) 1203
BspOI GCTAGC 1 cut(s) 212
BspPI GGATC 6 cut(s) 248, 389, 402, 1467, 1781, 1794
BspQI GCTCTTC 4 cut(s) 668, 752, 915, 1664
BspT107I GGYRCC 1 cut(s) 408
BsrBI CCGCTC 2 cut(s) 684, 768
BsrDI GCAATG 1 cut(s) 1441
BsrI ACTGG 3 cut(s) 219, 257, 1801
BssMI GATC 5 cut(s) 240, 394, 1459, 1567, 1786
BssNI GRCGYC 3 cut(s) 165, 409, 1623
BssSI CACGAG 2 cut(s) 632, 716
BssT1I CCWWGG 4 cut(s) 186, 273, 336, 375
Bst2BI CACGAG 2 cut(s) 632, 716
Bst4CI ACNGT 6 cut(s) 138, 194, 570, 945, 1559, 1582
Bst6I CTCTTC 4 cut(s) 668, 752, 915, 1664
BstACI GRCGYC 3 cut(s) 165, 409, 1623
BstC8I GCNNGC 3 cut(s) 210, 426, 851
BstDEI CTNAG 8 cut(s) 179, 227, 323, 678, 762, 822, 1134, 1884
BstDSI CCRYGG 2 cut(s) 273, 594
BstENI CCTNNNNNAGG 1 cut(s) 402
BstF5I GGATG 4 cut(s) 810, 1605, 1645, 1834
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 2 cut(s) 412, 591
BstHHI GCGC 4 cut(s) 205, 411, 590, 1657
BstKTI GATC 5 cut(s) 243, 397, 1462, 1570, 1789
BstMAI GTCTC 2 cut(s) 825, 1933
BstMBI GATC 5 cut(s) 240, 394, 1459, 1567, 1786
BstMWI GCNNNNNNNGC 8 cut(s) 209, 587, 596, 658, 742, 1198, 1526, 1730
BstNSI RCATGY 3 cut(s) 1511, 1839, 1946
BstSCI CCNGG 4 cut(s) 114, 546, 547, 1455
BstSFI CTRYAG 4 cut(s) 244, 1199, 1524, 1578
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 9 cut(s) 96, 217, 639, 723, 830, 840, 1048, 1507, 1860
BstV2I GAAGAC 2 cut(s) 869, 1576
BstX2I RGATCY 4 cut(s) 240, 394, 1567, 1786
BstYI RGATCY 4 cut(s) 240, 394, 1567, 1786
BsuI GTATCC 1 cut(s) 912
BsuRI GGCC 3 cut(s) 555, 581, 1343
BtgI CCRYGG 2 cut(s) 273, 594
BtrI CACGTC 1 cut(s) 1744
BtsCI GGATG 4 cut(s) 810, 1605, 1645, 1834
BtsI GCAGTG 1 cut(s) 1196
BtsIMutI CAGTG 5 cut(s) 77, 212, 1116, 1196, 1794
Cac8I GCNNGC 3 cut(s) 210, 426, 851
CciI TCATGA 2 cut(s) 196, 1606
CfoI GCGC 4 cut(s) 205, 411, 590, 1657
Cfr13I GGNCC 4 cut(s) 41, 183, 1321, 1555
Cfr9I CCCGGG 1 cut(s) 547
CseI GACGC 2 cut(s) 120, 173
Csp6I GTAC 4 cut(s) 558, 988, 1207, 1299
CviQI GTAC 4 cut(s) 558, 988, 1207, 1299
DdeI CTNAG 8 cut(s) 179, 227, 323, 678, 762, 822, 1134, 1884
DinI GGCGCC 1 cut(s) 410
DpnI GATC 5 cut(s) 242, 396, 1461, 1569, 1788
DpnII GATC 5 cut(s) 240, 394, 1459, 1567, 1786
DraIII CACNNNGTG 1 cut(s) 140
DrdI GACNNNNNNGTC 1 cut(s) 1840
DseDI GACNNNNNNGTC 1 cut(s) 1840
EaeI YGGCCR 1 cut(s) 579
Eam1104I CTCTTC 4 cut(s) 668, 752, 915, 1664
EarI CTCTTC 4 cut(s) 668, 752, 915, 1664
EciI GGCGGA 1 cut(s) 836
Eco130I CCWWGG 4 cut(s) 186, 273, 336, 375
Eco147I AGGCCT 1 cut(s) 1343
Eco47I GGWCC 4 cut(s) 41, 183, 1321, 1555
Eco57I CTGAAG 4 cut(s) 641, 725, 881, 1092
Eco88I CYCGRG 5 cut(s) 59, 94, 169, 547, 1045
EcoNI CCTNNNNNAGG 1 cut(s) 402
EcoO109I RGGNCCY 2 cut(s) 41, 1321
EcoT14I CCWWGG 4 cut(s) 186, 273, 336, 375
EgeI GGCGCC 1 cut(s) 410
EheI GGCGCC 1 cut(s) 410
ErhI CCWWGG 4 cut(s) 186, 273, 336, 375
FalI AAGNNNNNCTT 2 cut(s) 523, 555
FaqI GGGAC 2 cut(s) 76, 1846
FauNDI CATATG 1 cut(s) 1589
FokI GGATG 4 cut(s) 797, 1612, 1652, 1841
FspBI CTAG 6 cut(s) 45, 209, 237, 413, 1277, 1982
GlaI GCGC 4 cut(s) 204, 410, 589, 1656
GsuI CTGGAG 1 cut(s) 236
HaeII RGCGCY 2 cut(s) 412, 591
HaeIII GGCC 3 cut(s) 555, 581, 1343
HapII CCGG 3 cut(s) 116, 548, 1456
HgaI GACGC 2 cut(s) 120, 173
HhaI GCGC 4 cut(s) 205, 411, 590, 1657
Hin1I GRCGYC 3 cut(s) 165, 409, 1623
Hin6I GCGC 4 cut(s) 203, 409, 588, 1655
HinP1I GCGC 4 cut(s) 203, 409, 588, 1655
HincII GTYRAC 4 cut(s) 457, 880, 958, 1702
HindII GTYRAC 4 cut(s) 457, 880, 958, 1702
HpaI GTTAAC 2 cut(s) 457, 958
HpaII CCGG 3 cut(s) 116, 548, 1456
HphI GGTGA 3 cut(s) 701, 808, 1143
Hpy166II GTNNAC 7 cut(s) 457, 880, 938, 958, 1114, 1702, 1802
Hpy8I GTNNAC 7 cut(s) 457, 880, 938, 958, 1114, 1702, 1802
Hpy99I CGWCG 2 cut(s) 92, 604
HpyCH4III ACNGT 6 cut(s) 138, 194, 570, 945, 1559, 1582
HpyCH4IV ACGT 3 cut(s) 1297, 1623, 1743
HpyF10VI GCNNNNNNNGC 8 cut(s) 209, 587, 596, 658, 742, 1198, 1526, 1730
HpyF3I CTNAG 8 cut(s) 179, 227, 323, 678, 762, 822, 1134, 1884
HpySE526I ACGT 3 cut(s) 1297, 1623, 1743
Hsp92I GRCGYC 3 cut(s) 165, 409, 1623
HspAI GCGC 4 cut(s) 203, 409, 588, 1655
KasI GGCGCC 1 cut(s) 408
KspAI GTTAAC 2 cut(s) 457, 958
Kzo9I GATC 5 cut(s) 240, 394, 1459, 1567, 1786
LguI GCTCTTC 4 cut(s) 668, 752, 915, 1664
LmnI GCTCC 7 cut(s) 14, 25, 175, 668, 752, 1037, 1700
Lsp1109I GCAGC 9 cut(s) 96, 217, 639, 723, 830, 840, 1048, 1507, 1860
LweI GCATC 3 cut(s) 874, 880, 1590
MaeI CTAG 6 cut(s) 45, 209, 237, 413, 1277, 1982
MaeII ACGT 3 cut(s) 1297, 1623, 1743
MaeIII GTNAC 3 cut(s) 132, 796, 1149
MalI GATC 5 cut(s) 242, 396, 1461, 1569, 1788
MbiI CCGCTC 2 cut(s) 684, 768
MboI GATC 5 cut(s) 240, 394, 1459, 1567, 1786
MflI RGATCY 4 cut(s) 240, 394, 1567, 1786
MhlI GDGCHC 2 cut(s) 311, 350
MluI ACGCGT 1 cut(s) 129
Mly113I GGCGCC 1 cut(s) 409
MlyI GAGTC 6 cut(s) 86, 989, 995, 1057, 1109, 1966
MmeI TCCRAC 5 cut(s) 1023, 1261, 1289, 1687, 1707
MroXI GAANNNNTTC 3 cut(s) 318, 357, 1472
MseI TTAA 8 cut(s) 402, 456, 947, 957, 1029, 1709, 1718, 1970
MslI CAYNNNNRTG 2 cut(s) 1056, 1631
MspA1I CMGCKG 2 cut(s) 109, 853
MspI CCGG 3 cut(s) 116, 548, 1456
MspR9I CCNGG 4 cut(s) 116, 548, 549, 1457
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 8 cut(s) 209, 587, 596, 658, 742, 1198, 1526, 1730
NarI GGCGCC 1 cut(s) 409
NciI CCSGG 4 cut(s) 116, 548, 549, 1457
NcoI CCATGG 1 cut(s) 273
NdeI CATATG 1 cut(s) 1589
NdeII GATC 5 cut(s) 240, 394, 1459, 1567, 1786
NheI GCTAGC 1 cut(s) 208
NlaIV GGNNCC 7 cut(s) 16, 396, 410, 1240, 1323, 1696, 1788
NmeAIII GCCGAG 2 cut(s) 169, 472
NmuCI GTSAC 3 cut(s) 132, 796, 1149
NspI RCATGY 3 cut(s) 1511, 1839, 1946
PaeR7I CTCGAG 1 cut(s) 169
PagI TCATGA 2 cut(s) 196, 1606
PceI AGGCCT 1 cut(s) 1343
PciI ACATGT 1 cut(s) 1835
PciSI GCTCTTC 4 cut(s) 668, 752, 915, 1664
PcsI WCGNNNNNNNCGW 2 cut(s) 87, 444
PdmI GAANNNNTTC 3 cut(s) 318, 357, 1472
PfeI GAWTC 8 cut(s) 35, 67, 256, 461, 482, 1255, 1289, 1574
PfoI TCCNGGA 1 cut(s) 1455
PleI GAGTC 6 cut(s) 86, 989, 995, 1056, 1109, 1965
PluTI GGCGCC 1 cut(s) 412
PpsI GAGTC 6 cut(s) 86, 989, 995, 1056, 1109, 1965
PpuMI RGGWCCY 2 cut(s) 41, 1321
PscI ACATGT 1 cut(s) 1835
PsiI TTATAA 2 cut(s) 530, 1928
Psp5II RGGWCCY 2 cut(s) 41, 1321
PspN4I GGNNCC 7 cut(s) 16, 396, 410, 1240, 1323, 1696, 1788
PspPI GGNCC 4 cut(s) 41, 183, 1321, 1555
PspPPI RGGWCCY 2 cut(s) 41, 1321
PspXI VCTCGAGB 1 cut(s) 169
PstI CTGCAG 1 cut(s) 1203
PsuI RGATCY 4 cut(s) 240, 394, 1567, 1786
PvuII CAGCTG 1 cut(s) 853
RsaI GTAC 4 cut(s) 559, 989, 1208, 1300
RsaNI GTAC 4 cut(s) 558, 988, 1207, 1299
RseI CAYNNNNRTG 2 cut(s) 1056, 1631
SapI GCTCTTC 4 cut(s) 668, 752, 915, 1664
SaqAI TTAA 8 cut(s) 402, 456, 947, 957, 1029, 1709, 1718, 1970
Sau3AI GATC 5 cut(s) 240, 394, 1459, 1567, 1786
Sau96I GGNCC 4 cut(s) 41, 183, 1321, 1555
ScaI AGTACT 1 cut(s) 989
SchI GAGTC 6 cut(s) 86, 989, 995, 1057, 1109, 1966
ScrFI CCNGG 4 cut(s) 116, 548, 549, 1457
SduI GDGCHC 2 cut(s) 311, 350
SfaNI GCATC 3 cut(s) 874, 880, 1590
SfcI CTRYAG 4 cut(s) 244, 1199, 1524, 1578
SfoI GGCGCC 1 cut(s) 410
Sfr274I CTCGAG 1 cut(s) 169
SinI GGWCC 4 cut(s) 41, 183, 1321, 1555
SlaI CTCGAG 1 cut(s) 169
SmaI CCCGGG 1 cut(s) 549
SmiMI CAYNNNNRTG 2 cut(s) 1056, 1631
SmlI CTYRAG 4 cut(s) 169, 961, 1502, 1954
SmoI CTYRAG 4 cut(s) 169, 961, 1502, 1954
SpeI ACTAGT 1 cut(s) 1276
SseBI AGGCCT 1 cut(s) 1343
SspDI GGCGCC 1 cut(s) 408
SspMI CTAG 6 cut(s) 45, 209, 237, 413, 1277, 1982
StuI AGGCCT 1 cut(s) 1343
StyD4I CCNGG 4 cut(s) 114, 546, 547, 1455
StyI CCWWGG 4 cut(s) 186, 273, 336, 375
TaaI ACNGT 6 cut(s) 138, 194, 570, 945, 1559, 1582
TaiI ACGT 3 cut(s) 1300, 1626, 1746
TaqI TCGA 6 cut(s) 87, 170, 640, 724, 993, 1303
TatI WGTACW 2 cut(s) 987, 1206
TauI GCSGC 5 cut(s) 443, 446, 581, 1695, 1949
TfiI GAWTC 8 cut(s) 35, 67, 256, 461, 482, 1255, 1289, 1574
Tru1I TTAA 8 cut(s) 402, 456, 947, 957, 1029, 1709, 1718, 1970
Tru9I TTAA 8 cut(s) 402, 456, 947, 957, 1029, 1709, 1718, 1970
TscAI CASTG 5 cut(s) 77, 219, 1116, 1203, 1801
TseFI GTSAC 3 cut(s) 132, 796, 1149
TseI GCWGC 9 cut(s) 109, 205, 652, 736, 818, 853, 1061, 1520, 1873
Tsp45I GTSAC 3 cut(s) 132, 796, 1149
TspGWI ACGGA 7 cut(s) 326, 365, 454, 617, 803, 1687, 1799
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 5 cut(s) 77, 219, 1116, 1203, 1801
VpaK11BI GGWCC 4 cut(s) 41, 183, 1321, 1555
XagI CCTNNNNNAGG 1 cut(s) 402
XapI RAATTY 4 cut(s) 613, 901, 1177, 1858
XceI RCATGY 3 cut(s) 1511, 1839, 1946
XhoI CTCGAG 1 cut(s) 169
XmaI CCCGGG 1 cut(s) 547
XmnI GAANNNNTTC 3 cut(s) 318, 357, 1472
XspI CTAG 6 cut(s) 45, 209, 237, 413, 1277, 1982
ZraI GACGTC 1 cut(s) 1624
ZrmI AGTACT 1 cut(s) 989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.