Rmu_sc0003525.1_g000003

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003525.1
OG0012606
Physical Location & Seq
Forward (+)
16279 .. 21171
4893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003525.1_g000003.1.cds

Sequence Viewer

Length: 2364 bp
atggtaggatttggagcctcggaggagctgtccgaatcaggtcctagttctggaaaactcgggacgattcagtgggcaaacgagttcgacgactcgggaaaaaaaccgctgcacccggcgttagctcacgcgtcacggtgtgccgaggtgttggtaaagaatgacgcctcgagggagctgatgaccaaggacggtcatgaggcgcagctagcactggagttgtcgcttagtgaggctaggatctgtagatactggaatccgaaagatttgtccatggaaaattattacatgaatgaaaaggatttgagcacggaaaaacttctgagtgaaaaaaccaaggatttgagcacggaaaaacttccgagtgaaaaaaccaaggagattgctgacatggatcctgttaaagggcgcctagcttatctgcctgctctacttatcgccgccgccgagaaggttaacgattccgtcttggagttgcatgattcctattcggggggcaaggagaaggacactctctatgaacgtcttataagagaggctttgaccccgggaggccgtacaacgacaccgttgagggaggccaaaagcgcctccacggcgacggagggcgaaaattcggagagaaggaagctcgtgcttcgagagatagagctgcttcagctcttcggagctgttcctcagagcggtggtgaggacaagaaggtggcgaggaagctcgtgcttcgagagatagagctgcttcagctcttcggagctgttgctcagagcggtggtggtggtggtagggaaaagaaggtgacttcgccactcatccgtgcagctcaggtgaggccccactgttctcaatatgttggaaccaaatccttagctgtccagtatatgtcggaacagaaagaaacccccatctttttcgctgtgaataatgagagtgaagactgtgctgagcttcttatgacctgtggagccaatagtgaagtccttaatgtgcggcctttgcttgtgcatgtttatatgtttactctgttcatagtactcaagtttctactgcctttgaatgctagaaatgttaactcaagcaccgaggcaaaggttcataagtacttcgactccgactctcatcaaggatatgtcaaaggagttaagaagggagcatacccgagtcatttttgtgctgctaaacaactcaaacgcaaaatcttttttggaggacttccttcttcagtggactctgatgttttggtagctgagtttgaaaaaatgtcacctcaacaacaagaacaggagaagaattttcaatatcagcttccactgcagaagtacaacaagtatattatgggttcgtgtcatggaaccacaattttgtggattcagcttccaactgaactactagttggagtagattcacaacgtactcgaaagtatatagcaaaggacccaaagaacaagaggaaggcctatgagcttttggagagcgaaattgaagataagtttgtagaaatcatcaaaggagtgtatgcaactctttgcggagatggaaagaggtgcaatgaaatggttgagtttgtccgggatcaaatgaagcaattcatagatattggaggcatacctactcttgagcatgttggcaaggctgctacagcatattttcataagttctatccaatggaccgtgaaaaagatcttgaatctacagtcttcatatgtgcttggatgcctcatgaaaagaaatatgacgtcattgaagtgggggatgtgcctaaaaatgcgctcttccgacaaaataaggttttcggaagtggaagcggctccgtcaacatattaaccgagttaaaagcgttggaagcaccaatagacgtgaatgtagtaaagaataaattgataagagcaacactcacggatccttacactggtggacatcttcaagtttattctttgaaggatgggacatgtgtgtccaagtatgaaggaaatttgataaatgagctgcacaaccctgagtatgcagacatactttttgatggaaaaagtatgtttgttataattcaaacgagacatgccgcaatcttgagtccgcaagacttaatggaagtcctagaaagattcgatacaagtgttcatcatatccattggttatgctttgtcaagagctttctagtgtatcgagtgatactctcatcaccagaatgttgtcataactggtttggctcctgcaaagtgttcaaagaacctattcggcgtcaaagatattccatcaaagatggttcttgtgactattatcttggatatgctagtagtgagatactacatcgagcactgaagatggagtcatttgatgatttggcagaccctttaggattagaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

787

Amino Acids

88.51

Weight (kDa)

6.44

Isoelectric Point (pI)

48.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 530, 2039
AasI GACNNNNNNGTC 1 cut(s) 1951
AatII GACGTC 1 cut(s) 1737
AbsI CCTCGAGG 1 cut(s) 169
AccB1I GGYRCC 1 cut(s) 408
AccBSI CCGCTC 2 cut(s) 684, 768
AccII CGCG 1 cut(s) 131
AclWI GGATC 6 cut(s) 248, 389, 402, 1578, 1892, 1905
AcsI RAATTY 3 cut(s) 613, 1288, 1969
AcuI CTGAAG 4 cut(s) 641, 725, 1203, 2336
AcyI GRCGYC 4 cut(s) 165, 409, 1734, 2236
AdeI CACNNNGTG 1 cut(s) 140
AfaI GTAC 5 cut(s) 559, 1032, 1100, 1319, 1411
AfiI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1907
AflIII ACRYGT 2 cut(s) 129, 1946
AhlI ACTAGT 1 cut(s) 1387
AjiI CACGTC 1 cut(s) 1855
AjuI GAANNNNNNNTTGG 2 cut(s) 1374, 1406
Alw21I GWGCWC 3 cut(s) 311, 350, 2314
Alw26I GTCTC 1 cut(s) 2044
AlwI GGATC 6 cut(s) 248, 389, 402, 1578, 1892, 1905
Ama87I CYCGRG 5 cut(s) 59, 94, 169, 547, 1156
AoxI GGCC 5 cut(s) 553, 579, 830, 989, 1452
ApeKI GCWGC 8 cut(s) 109, 205, 652, 736, 818, 1172, 1631, 1984
ApoI RAATTY 3 cut(s) 613, 1288, 1969
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 1997, 2029
Asp700I GAANNNNTTC 4 cut(s) 318, 357, 1583, 2229
AspLEI GCGC 4 cut(s) 205, 411, 590, 1768
AspS9I GGNCC 4 cut(s) 41, 831, 1432, 1666
AsuC2I CCSGG 4 cut(s) 116, 548, 549, 1568
AsuHPI GGTGA 5 cut(s) 701, 808, 838, 1254, 2169
AsuNHI GCTAGC 1 cut(s) 208
AvaI CYCGRG 5 cut(s) 59, 94, 169, 547, 1156
AvaII GGWCC 3 cut(s) 41, 1432, 1666
BaeI ACNNNNGTAYC 2 cut(s) 2097, 2130
BamHI GGATCC 2 cut(s) 394, 1897
BanI GGYRCC 1 cut(s) 408
BarI GAAGNNNNNNTAC 2 cut(s) 1136, 1168
BauI CACGAG 2 cut(s) 632, 716
BbsI GAAGAC 2 cut(s) 939, 1687
Bbv12I GWGCWC 3 cut(s) 311, 350, 2314
BbvI GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1159, 1618, 1971
BccI CCATC 7 cut(s) 911, 1526, 1934, 2012, 2252, 2258, 2314
BceAI ACGGC 2 cut(s) 540, 612
BcnI CCSGG 4 cut(s) 116, 548, 549, 1568
BcoDI GTCTC 1 cut(s) 2044
BcuI ACTAGT 1 cut(s) 1387
BfaI CTAG 9 cut(s) 45, 209, 237, 413, 1059, 1388, 2093, 2153, 2289
BfmI CTRYAG 4 cut(s) 244, 1310, 1635, 1689
BfoI RGCGCY 2 cut(s) 412, 591
BglI GCCNNNNNGGC 1 cut(s) 596
BglII AGATCT 1 cut(s) 1678
BlpI GCTNAGC 1 cut(s) 942
BmcAI AGTACT 2 cut(s) 1032, 1100
Bme1390I CCNGG 4 cut(s) 116, 548, 549, 1568
Bme18I GGWCC 3 cut(s) 41, 1432, 1666
BmeT110I CYCGRG 5 cut(s) 59, 94, 169, 547, 1156
BmgBI CACGTC 1 cut(s) 1855
BmgT120I GGNCC 4 cut(s) 41, 831, 1432, 1666
BmrFI CCNGG 4 cut(s) 116, 548, 549, 1568
BmsI GCATC 1 cut(s) 1701
BmtI GCTAGC 1 cut(s) 212
BpiI GAAGAC 2 cut(s) 939, 1687
BplI GAGNNNNNCTC 4 cut(s) 1875, 1907, 2154, 2186
BpmI CTGGAG 1 cut(s) 236
Bpu10I CCTNAGC 2 cut(s) 822, 865
Bpu1102I GCTNAGC 1 cut(s) 942
BpuEI CTTGAG 4 cut(s) 1019, 1057, 1634, 2086
BpuMI CCSGG 4 cut(s) 116, 548, 549, 1568
BsaHI GRCGYC 4 cut(s) 165, 409, 1734, 2236
BsaXI ACNNNNNCTCC 4 cut(s) 14, 44, 1091, 1121
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1907
Bse1I ACTGG 5 cut(s) 219, 257, 874, 1912, 2201
Bse3DI GCAATG 1 cut(s) 1552
BseGI GGATG 4 cut(s) 810, 1716, 1756, 1945
BseLI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1907
BseMI GCAATG 1 cut(s) 1552
BseMII CTCAG 7 cut(s) 314, 692, 776, 836, 933, 1236, 1986
BseNI ACTGG 5 cut(s) 219, 257, 874, 1912, 2201
BseRI GAGGAG 1 cut(s) 38
BseXI GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1159, 1618, 1971
BsgI GTGCAG 3 cut(s) 95, 837, 1970
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 5 cut(s) 555, 581, 832, 991, 1454
BshNI GGYRCC 1 cut(s) 408
BsiHKAI GWGCWC 3 cut(s) 311, 350, 2314
BsiHKCI CYCGRG 5 cut(s) 59, 94, 169, 547, 1156
BsiSI CCGG 3 cut(s) 116, 548, 1567
BslFI GGGAC 2 cut(s) 76, 1957
BslI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1907
BsmAI GTCTC 1 cut(s) 2044
BsmFI GGGAC 2 cut(s) 76, 1957
BsmI GAATGC 1 cut(s) 1060
BsnI GGCC 5 cut(s) 555, 581, 832, 991, 1454
BsoBI CYCGRG 5 cut(s) 59, 94, 169, 547, 1156
Bsp1286I GDGCHC 3 cut(s) 311, 350, 2314
Bsp143I GATC 5 cut(s) 240, 394, 1570, 1678, 1897
Bsp1720I GCTNAGC 1 cut(s) 942
Bsp19I CCATGG 1 cut(s) 273
BspANI GGCC 5 cut(s) 555, 581, 832, 991, 1454
BspCNI CTCAG 7 cut(s) 315, 691, 775, 835, 934, 1237, 1987
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 2 cut(s) 196, 1717
BspMAI CTGCAG 1 cut(s) 1314
BspOI GCTAGC 1 cut(s) 212
BspPI GGATC 6 cut(s) 248, 389, 402, 1578, 1892, 1905
BspQI GCTCTTC 3 cut(s) 668, 752, 1775
BspT107I GGYRCC 1 cut(s) 408
BsrBI CCGCTC 2 cut(s) 684, 768
BsrDI GCAATG 1 cut(s) 1552
BsrI ACTGG 5 cut(s) 219, 257, 874, 1912, 2201
BssMI GATC 5 cut(s) 240, 394, 1570, 1678, 1897
BssNI GRCGYC 4 cut(s) 165, 409, 1734, 2236
BssSI CACGAG 2 cut(s) 632, 716
BssT1I CCWWGG 4 cut(s) 186, 273, 336, 375
Bst2BI CACGAG 2 cut(s) 632, 716
Bst4CI ACNGT 7 cut(s) 138, 194, 570, 839, 938, 1670, 1693
Bst6I CTCTTC 3 cut(s) 668, 752, 1775
BstACI GRCGYC 4 cut(s) 165, 409, 1734, 2236
BstC8I GCNNGC 2 cut(s) 210, 426
BstDEI CTNAG 9 cut(s) 227, 323, 678, 762, 822, 865, 942, 1245, 1995
BstDSI CCRYGG 2 cut(s) 273, 594
BstENI CCTNNNNNAGG 1 cut(s) 402
BstF5I GGATG 4 cut(s) 810, 1716, 1756, 1945
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 2 cut(s) 412, 591
BstHHI GCGC 4 cut(s) 205, 411, 590, 1768
BstKTI GATC 5 cut(s) 243, 397, 1573, 1681, 1900
BstMAI GTCTC 1 cut(s) 2044
BstMBI GATC 5 cut(s) 240, 394, 1570, 1678, 1897
BstMWI GCNNNNNNNGC 9 cut(s) 209, 587, 596, 658, 742, 994, 1309, 1637, 1841
BstNSI RCATGY 4 cut(s) 1007, 1622, 1950, 2057
BstSCI CCNGG 4 cut(s) 114, 546, 547, 1566
BstSFI CTRYAG 4 cut(s) 244, 1310, 1635, 1689
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1159, 1618, 1971
BstV2I GAAGAC 2 cut(s) 939, 1687
BstX2I RGATCY 4 cut(s) 240, 394, 1678, 1897
BstYI RGATCY 4 cut(s) 240, 394, 1678, 1897
BsuRI GGCC 5 cut(s) 555, 581, 832, 991, 1454
BtgI CCRYGG 2 cut(s) 273, 594
BtrI CACGTC 1 cut(s) 1855
BtsCI GGATG 4 cut(s) 810, 1716, 1756, 1945
BtsI GCAGTG 1 cut(s) 1307
BtsIMutI CAGTG 7 cut(s) 77, 212, 835, 1227, 1307, 1905, 2312
Cac8I GCNNGC 2 cut(s) 210, 426
CciI TCATGA 2 cut(s) 196, 1717
CfoI GCGC 4 cut(s) 205, 411, 590, 1768
Cfr13I GGNCC 4 cut(s) 41, 831, 1432, 1666
Cfr9I CCCGGG 1 cut(s) 547
CseI GACGC 3 cut(s) 120, 173, 2225
Csp6I GTAC 5 cut(s) 558, 1031, 1099, 1318, 1410
CviQI GTAC 5 cut(s) 558, 1031, 1099, 1318, 1410
DdeI CTNAG 9 cut(s) 227, 323, 678, 762, 822, 865, 942, 1245, 1995
DinI GGCGCC 1 cut(s) 410
DpnI GATC 5 cut(s) 242, 396, 1572, 1680, 1899
DpnII GATC 5 cut(s) 240, 394, 1570, 1678, 1897
DraIII CACNNNGTG 1 cut(s) 140
DrdI GACNNNNNNGTC 1 cut(s) 1951
DseDI GACNNNNNNGTC 1 cut(s) 1951
Eam1104I CTCTTC 3 cut(s) 668, 752, 1775
EarI CTCTTC 3 cut(s) 668, 752, 1775
Eco130I CCWWGG 4 cut(s) 186, 273, 336, 375
Eco147I AGGCCT 1 cut(s) 1454
Eco47I GGWCC 3 cut(s) 41, 1432, 1666
Eco57I CTGAAG 4 cut(s) 641, 725, 1203, 2336
Eco88I CYCGRG 5 cut(s) 59, 94, 169, 547, 1156
EcoNI CCTNNNNNAGG 1 cut(s) 402
EcoO109I RGGNCCY 3 cut(s) 41, 831, 1432
EcoT14I CCWWGG 4 cut(s) 186, 273, 336, 375
EgeI GGCGCC 1 cut(s) 410
EheI GGCGCC 1 cut(s) 410
ErhI CCWWGG 4 cut(s) 186, 273, 336, 375
FalI AAGNNNNNCTT 2 cut(s) 523, 555
FaqI GGGAC 2 cut(s) 76, 1957
FauNDI CATATG 1 cut(s) 1700
FokI GGATG 4 cut(s) 797, 1723, 1763, 1952
FspBI CTAG 9 cut(s) 45, 209, 237, 413, 1059, 1388, 2093, 2153, 2289
GlaI GCGC 4 cut(s) 204, 410, 589, 1767
GsuI CTGGAG 1 cut(s) 236
HaeII RGCGCY 2 cut(s) 412, 591
HaeIII GGCC 5 cut(s) 555, 581, 832, 991, 1454
HapII CCGG 3 cut(s) 116, 548, 1567
HgaI GACGC 3 cut(s) 120, 173, 2225
HhaI GCGC 4 cut(s) 205, 411, 590, 1768
Hin1I GRCGYC 4 cut(s) 165, 409, 1734, 2236
Hin6I GCGC 4 cut(s) 203, 409, 588, 1766
HinP1I GCGC 4 cut(s) 203, 409, 588, 1766
HincII GTYRAC 3 cut(s) 457, 1069, 1813
HindII GTYRAC 3 cut(s) 457, 1069, 1813
HpaI GTTAAC 2 cut(s) 457, 1069
HpaII CCGG 3 cut(s) 116, 548, 1567
HphI GGTGA 5 cut(s) 701, 808, 838, 1254, 2169
Hpy166II GTNNAC 6 cut(s) 457, 1017, 1069, 1225, 1813, 1913
Hpy8I GTNNAC 6 cut(s) 457, 1017, 1069, 1225, 1813, 1913
Hpy99I CGWCG 2 cut(s) 92, 604
HpyCH4III ACNGT 7 cut(s) 138, 194, 570, 839, 938, 1670, 1693
HpyCH4IV ACGT 4 cut(s) 523, 1408, 1734, 1854
HpyF10VI GCNNNNNNNGC 9 cut(s) 209, 587, 596, 658, 742, 994, 1309, 1637, 1841
HpyF3I CTNAG 9 cut(s) 227, 323, 678, 762, 822, 865, 942, 1245, 1995
HpySE526I ACGT 4 cut(s) 523, 1408, 1734, 1854
Hsp92I GRCGYC 4 cut(s) 165, 409, 1734, 2236
HspAI GCGC 4 cut(s) 203, 409, 588, 1766
KasI GGCGCC 1 cut(s) 408
KspAI GTTAAC 2 cut(s) 457, 1069
Kzo9I GATC 5 cut(s) 240, 394, 1570, 1678, 1897
LguI GCTCTTC 3 cut(s) 668, 752, 1775
LmnI GCTCC 9 cut(s) 14, 25, 175, 668, 752, 962, 1148, 1811, 2210
Lsp1109I GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1159, 1618, 1971
LweI GCATC 1 cut(s) 1701
MaeI CTAG 9 cut(s) 45, 209, 237, 413, 1059, 1388, 2093, 2153, 2289
MaeII ACGT 4 cut(s) 523, 1408, 1734, 1854
MaeIII GTNAC 4 cut(s) 132, 796, 1260, 2267
MalI GATC 5 cut(s) 242, 396, 1572, 1680, 1899
MbiI CCGCTC 2 cut(s) 684, 768
MboI GATC 5 cut(s) 240, 394, 1570, 1678, 1897
MflI RGATCY 4 cut(s) 240, 394, 1678, 1897
MhlI GDGCHC 3 cut(s) 311, 350, 2314
MluCI AATT 9 cut(s) 280, 613, 1288, 1356, 1476, 1583, 1874, 1969, 2040
MluI ACGCGT 1 cut(s) 129
Mly113I GGCGCC 1 cut(s) 409
MlyI GAGTC 7 cut(s) 86, 1100, 1106, 1168, 1220, 2077, 2333
MmeI TCCRAC 7 cut(s) 832, 864, 1134, 1372, 1400, 1798, 1818
MroXI GAANNNNTTC 4 cut(s) 318, 357, 1583, 2229
MseI TTAA 8 cut(s) 402, 456, 981, 1068, 1140, 1820, 1829, 2081
MslI CAYNNNNRTG 3 cut(s) 1167, 1742, 2182
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 3 cut(s) 116, 548, 1567
MspR9I CCNGG 4 cut(s) 116, 548, 549, 1568
Mva1269I GAATGC 1 cut(s) 1060
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 9 cut(s) 209, 587, 596, 658, 742, 994, 1309, 1637, 1841
NarI GGCGCC 1 cut(s) 409
NciI CCSGG 4 cut(s) 116, 548, 549, 1568
NcoI CCATGG 1 cut(s) 273
NdeI CATATG 1 cut(s) 1700
NdeII GATC 5 cut(s) 240, 394, 1570, 1678, 1897
NheI GCTAGC 1 cut(s) 208
NmeAIII GCCGAG 2 cut(s) 169, 472
NmuCI GTSAC 4 cut(s) 132, 796, 1260, 2267
NspI RCATGY 4 cut(s) 1007, 1622, 1950, 2057
PaeR7I CTCGAG 1 cut(s) 169
PagI TCATGA 2 cut(s) 196, 1717
PceI AGGCCT 1 cut(s) 1454
PciI ACATGT 1 cut(s) 1946
PciSI GCTCTTC 3 cut(s) 668, 752, 1775
PcsI WCGNNNNNNNCGW 2 cut(s) 87, 444
PctI GAATGC 1 cut(s) 1060
PdmI GAANNNNTTC 4 cut(s) 318, 357, 1583, 2229
PfeI GAWTC 9 cut(s) 35, 67, 256, 461, 482, 1366, 1400, 1685, 2100
PfoI TCCNGGA 1 cut(s) 1566
PleI GAGTC 7 cut(s) 86, 1100, 1106, 1167, 1220, 2076, 2332
PluTI GGCGCC 1 cut(s) 412
PpsI GAGTC 7 cut(s) 86, 1100, 1106, 1167, 1220, 2076, 2332
PpuMI RGGWCCY 2 cut(s) 41, 1432
PscI ACATGT 1 cut(s) 1946
PsiI TTATAA 2 cut(s) 530, 2039
Psp5II RGGWCCY 2 cut(s) 41, 1432
PspPI GGNCC 4 cut(s) 41, 831, 1432, 1666
PspPPI RGGWCCY 2 cut(s) 41, 1432
PspXI VCTCGAGB 1 cut(s) 169
PstI CTGCAG 1 cut(s) 1314
PsuI RGATCY 4 cut(s) 240, 394, 1678, 1897
RsaI GTAC 5 cut(s) 559, 1032, 1100, 1319, 1411
RsaNI GTAC 5 cut(s) 558, 1031, 1099, 1318, 1410
RseI CAYNNNNRTG 3 cut(s) 1167, 1742, 2182
SapI GCTCTTC 3 cut(s) 668, 752, 1775
SaqAI TTAA 8 cut(s) 402, 456, 981, 1068, 1140, 1820, 1829, 2081
Sau3AI GATC 5 cut(s) 240, 394, 1570, 1678, 1897
Sau96I GGNCC 4 cut(s) 41, 831, 1432, 1666
ScaI AGTACT 2 cut(s) 1032, 1100
SchI GAGTC 7 cut(s) 86, 1100, 1106, 1168, 1220, 2077, 2333
ScrFI CCNGG 4 cut(s) 116, 548, 549, 1568
SduI GDGCHC 3 cut(s) 311, 350, 2314
SfaNI GCATC 1 cut(s) 1701
SfcI CTRYAG 4 cut(s) 244, 1310, 1635, 1689
SfoI GGCGCC 1 cut(s) 410
Sfr274I CTCGAG 1 cut(s) 169
SinI GGWCC 3 cut(s) 41, 1432, 1666
SlaI CTCGAG 1 cut(s) 169
SmaI CCCGGG 1 cut(s) 549
SmiMI CAYNNNNRTG 3 cut(s) 1167, 1742, 2182
SmlI CTYRAG 5 cut(s) 169, 1034, 1072, 1613, 2065
SmoI CTYRAG 5 cut(s) 169, 1034, 1072, 1613, 2065
SpeI ACTAGT 1 cut(s) 1387
Sse9I AATT 9 cut(s) 280, 613, 1288, 1356, 1476, 1583, 1874, 1969, 2040
SseBI AGGCCT 1 cut(s) 1454
SspDI GGCGCC 1 cut(s) 408
SspMI CTAG 9 cut(s) 45, 209, 237, 413, 1059, 1388, 2093, 2153, 2289
StuI AGGCCT 1 cut(s) 1454
StyD4I CCNGG 4 cut(s) 114, 546, 547, 1566
StyI CCWWGG 4 cut(s) 186, 273, 336, 375
TaaI ACNGT 7 cut(s) 138, 194, 570, 839, 938, 1670, 1693
TaiI ACGT 4 cut(s) 526, 1411, 1737, 1857
TaqI TCGA 9 cut(s) 87, 170, 640, 724, 1104, 1414, 2103, 2161, 2308
TasI AATT 9 cut(s) 280, 613, 1288, 1356, 1476, 1583, 1874, 1969, 2040
TatI WGTACW 3 cut(s) 1030, 1098, 1317
TauI GCSGC 5 cut(s) 443, 446, 991, 1806, 2060
TfiI GAWTC 9 cut(s) 35, 67, 256, 461, 482, 1366, 1400, 1685, 2100
Tru1I TTAA 8 cut(s) 402, 456, 981, 1068, 1140, 1820, 1829, 2081
Tru9I TTAA 8 cut(s) 402, 456, 981, 1068, 1140, 1820, 1829, 2081
TscAI CASTG 7 cut(s) 77, 219, 842, 1227, 1314, 1912, 2319
TseFI GTSAC 4 cut(s) 132, 796, 1260, 2267
TseI GCWGC 8 cut(s) 109, 205, 652, 736, 818, 1172, 1631, 1984
Tsp45I GTSAC 4 cut(s) 132, 796, 1260, 2267
TspGWI ACGGA 7 cut(s) 326, 365, 454, 617, 803, 1798, 1910
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 7 cut(s) 77, 219, 842, 1227, 1314, 1912, 2319
VpaK11BI GGWCC 3 cut(s) 41, 1432, 1666
XagI CCTNNNNNAGG 1 cut(s) 402
XapI RAATTY 3 cut(s) 613, 1288, 1969
XceI RCATGY 4 cut(s) 1007, 1622, 1950, 2057
XhoI CTCGAG 1 cut(s) 169
XmaI CCCGGG 1 cut(s) 547
XmnI GAANNNNTTC 4 cut(s) 318, 357, 1583, 2229
XspI CTAG 9 cut(s) 45, 209, 237, 413, 1059, 1388, 2093, 2153, 2289
ZraI GACGTC 1 cut(s) 1735
ZrmI AGTACT 2 cut(s) 1032, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.