Rmu_sc0000367.1_g000135

TPR and ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000367.1
OG0012606
Physical Location & Seq
Forward (+)
662559 .. 667451
4893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000367.1_g000135.1.cds

Sequence Viewer

Length: 2379 bp
atggtaggatttggagcctcggaggagctgtccgaatcaggtcctagttctggaaaactcgggacgattcagtgggcaaacgagttcgacgactcgggaaaaaaaccgctgcacccggcgttagctcacgcgtcacggtgtgccgaggtgttggtaaagaatgacgcctcgagggagctgatgaccaaggacggtcatgaggcgcagctagcactggagttgtcgcttagtgaggctaggatctgtagatactggaatccgaaagatttgtccatggaaaattattacatgaatgaaaaggatttgagcacggaaaaacttctgagtgaaaaaaccaaggatttgagcacggaaaaacttccgagtgaaaaaaccaaggagattgctgacatggatcctgttaaagggcgcctagcttatctgcctgctctacttatcgccgccgccgagaaggttaacgattccgtcttggagttgcatgattcctattcggggggcaaggagaaggacactctctatgaacgtcttataagagaggctttgaccccgggaggccgtacaacgacaccgttgagggaggccaaaagcgcctccacggcgacggagggcgaaaattcggagagaaggaagctcgtgcttcgagagatagagctgcttcagctcttcggagctgttcctcagagcggtggtgaggacaagaaggtggcgaggaagctcgtgcttcgagagatagagctgcttcagctcttcggagctgttgctcagagcggtggtggtggtggtagggaaaagaaggtgacttcgccactcatccgtgcagctcaggtgaggccccactgttctcaatatgttggaaccaaatccgttactgcattttggttagctgtccagtatatgtcggaacagaaagaaacccccatctttttcgctgtgaataatgagagtgaagactgtgctgagcttcttatgacctgtggagccaatagtgaagtccttaatgtgcggcctttgcttgtgcatgtttatatgtttactctgttcatagtactcaagtttctactgcctttgaatgctagaaatgttaactcaagcaccgaggcaaaggttcataagtacttcgactccgactctcatcaaggatatgtcaaaggagttaagaagggagcatacccgagtcatttttgtgctgctaaacaactcaaacgcaaaatcttttttggaggacttccttcttcagtggactctgatgttttggtagctgagtttgaaaaaatgtcacctcaacaacaagaacaggagaagaattttcaatatcagcttccactgcagaagtacaacaagtatattatgggttcgtgtcatggaaccacaattttgtggattcagcttccaactgaactactagttggagtagattcacaacgtactcgaaagtatatagcaaaggacccaaagaacaagaggaaggcctatgagcttttggagagcgaaattgaagataagtttgtagaaatcatcaaaggagtgtatgcaactctttgcggagatggaaagaggtgcaatgaaatggttgagtttgtccgggatcaaatgaagcaattcatagatattggaggcatacctactcttgagcatgttggcaaggctgctacagcatattttcataagttctatccaatggaccgtgaaaaagatcttgaatctacagtcttcatatgtgcttggatgcctcatgaaaagaaatatgacgtcattgaagtgggggatgtgcctaaaaatgcgctcttccgacaaaataaggttttcggaagtggaagcggctccgtcaacatattaaccgagttaaaagcgttggaagcaccaatagacgtgaatgtagtaaagaataaattgataagagcaacactcacggatccttacactggtggacatcttcaagtttattctttgaaggatgggacatgtgtgtccaagtatgaaggaaatttgataaatgagctgcacaaccctgagtatgcagacatactttttgatggaaaaagtatgtttgttataattcaaacgagacatgccgcaatcttgagtccgcaagacttaatggaagtcctagaaagattcgatacaagtgttcatcatatccattggttatgctttgtcaagagctttctagtgtatcgagtgatactctcatcaccagaatgttgtcataactggtttggctcctgcaaagtgttcaaagaacctattcggcgtcaaagatattccatcaaagatggttcttgtgactattatcttggatatgctagtagtgagatactacatcgagcactgaagatggagtcatttgatgatttggcagaccctttaggattagaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003678 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006353 GO:0006355 GO:0006357 GO:0006364 GO:0006366 GO:0006369 GO:0006378 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008033 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016180 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019904 GO:0022613 GO:0031123 GO:0031124 GO:0031126 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032574 GO:0032575 GO:0032774 GO:0032991 GO:0033554 GO:0033677 GO:0033678 GO:0033680 GO:0033682 GO:0034470 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035649 GO:0042254 GO:0042592 GO:0042623 GO:0043139 GO:0043141 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043618 GO:0043620 GO:0043628 GO:0043631 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045005 GO:0045454 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:1990248 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_11 AAA_12 AAA_19 UvrD-helicase

Protein Analysis

792

Amino Acids

89.11

Weight (kDa)

6.44

Isoelectric Point (pI)

48.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 530, 2054
AasI GACNNNNNNGTC 1 cut(s) 1966
AatII GACGTC 1 cut(s) 1752
AbsI CCTCGAGG 1 cut(s) 169
AccB1I GGYRCC 1 cut(s) 408
AccBSI CCGCTC 2 cut(s) 684, 768
AccII CGCG 1 cut(s) 131
AclWI GGATC 6 cut(s) 248, 389, 402, 1593, 1907, 1920
AcsI RAATTY 3 cut(s) 613, 1303, 1984
AcuI CTGAAG 4 cut(s) 641, 725, 1218, 2351
AcyI GRCGYC 4 cut(s) 165, 409, 1749, 2251
AdeI CACNNNGTG 1 cut(s) 140
AfaI GTAC 5 cut(s) 559, 1047, 1115, 1334, 1426
AfiI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1922
AflIII ACRYGT 2 cut(s) 129, 1961
AhlI ACTAGT 1 cut(s) 1402
AjiI CACGTC 1 cut(s) 1870
AjuI GAANNNNNNNTTGG 2 cut(s) 1389, 1421
Alw21I GWGCWC 3 cut(s) 311, 350, 2329
Alw26I GTCTC 1 cut(s) 2059
AlwI GGATC 6 cut(s) 248, 389, 402, 1593, 1907, 1920
Ama87I CYCGRG 5 cut(s) 59, 94, 169, 547, 1171
AoxI GGCC 5 cut(s) 553, 579, 830, 1004, 1467
ApeKI GCWGC 8 cut(s) 109, 205, 652, 736, 818, 1187, 1646, 1999
ApoI RAATTY 3 cut(s) 613, 1303, 1984
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 2012, 2044
Asp700I GAANNNNTTC 4 cut(s) 318, 357, 1598, 2244
AspLEI GCGC 4 cut(s) 205, 411, 590, 1783
AspS9I GGNCC 4 cut(s) 41, 831, 1447, 1681
AsuC2I CCSGG 4 cut(s) 116, 548, 549, 1583
AsuHPI GGTGA 5 cut(s) 701, 808, 838, 1269, 2184
AsuNHI GCTAGC 1 cut(s) 208
AvaI CYCGRG 5 cut(s) 59, 94, 169, 547, 1171
AvaII GGWCC 3 cut(s) 41, 1447, 1681
BaeI ACNNNNGTAYC 2 cut(s) 2112, 2145
BamHI GGATCC 2 cut(s) 394, 1912
BanI GGYRCC 1 cut(s) 408
BarI GAAGNNNNNNTAC 2 cut(s) 1151, 1183
BauI CACGAG 2 cut(s) 632, 716
BbsI GAAGAC 2 cut(s) 954, 1702
Bbv12I GWGCWC 3 cut(s) 311, 350, 2329
BbvI GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1174, 1633, 1986
BccI CCATC 7 cut(s) 926, 1541, 1949, 2027, 2267, 2273, 2329
BceAI ACGGC 2 cut(s) 540, 612
BcnI CCSGG 4 cut(s) 116, 548, 549, 1583
BcoDI GTCTC 1 cut(s) 2059
BcuI ACTAGT 1 cut(s) 1402
BfaI CTAG 9 cut(s) 45, 209, 237, 413, 1074, 1403, 2108, 2168, 2304
BfmI CTRYAG 4 cut(s) 244, 1325, 1650, 1704
BfoI RGCGCY 2 cut(s) 412, 591
BglI GCCNNNNNGGC 1 cut(s) 596
BglII AGATCT 1 cut(s) 1693
BlpI GCTNAGC 1 cut(s) 957
BmcAI AGTACT 2 cut(s) 1047, 1115
Bme1390I CCNGG 4 cut(s) 116, 548, 549, 1583
Bme18I GGWCC 3 cut(s) 41, 1447, 1681
BmeT110I CYCGRG 5 cut(s) 59, 94, 169, 547, 1171
BmgBI CACGTC 1 cut(s) 1870
BmgT120I GGNCC 4 cut(s) 41, 831, 1447, 1681
BmrFI CCNGG 4 cut(s) 116, 548, 549, 1583
BmsI GCATC 1 cut(s) 1716
BmtI GCTAGC 1 cut(s) 212
BpiI GAAGAC 2 cut(s) 954, 1702
BplI GAGNNNNNCTC 4 cut(s) 1890, 1922, 2169, 2201
BpmI CTGGAG 1 cut(s) 236
Bpu10I CCTNAGC 1 cut(s) 822
Bpu1102I GCTNAGC 1 cut(s) 957
BpuEI CTTGAG 4 cut(s) 1034, 1072, 1649, 2101
BpuMI CCSGG 4 cut(s) 116, 548, 549, 1583
BsaHI GRCGYC 4 cut(s) 165, 409, 1749, 2251
BsaXI ACNNNNNCTCC 4 cut(s) 14, 44, 1106, 1136
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1922
Bse1I ACTGG 5 cut(s) 219, 257, 889, 1927, 2216
Bse3DI GCAATG 1 cut(s) 1567
BseGI GGATG 4 cut(s) 810, 1731, 1771, 1960
BseLI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1922
BseMI GCAATG 1 cut(s) 1567
BseMII CTCAG 7 cut(s) 314, 692, 776, 836, 948, 1251, 2001
BseNI ACTGG 5 cut(s) 219, 257, 889, 1927, 2216
BseRI GAGGAG 1 cut(s) 38
BseXI GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1174, 1633, 1986
BsgI GTGCAG 3 cut(s) 95, 837, 1985
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 5 cut(s) 555, 581, 832, 1006, 1469
BshNI GGYRCC 1 cut(s) 408
BsiHKAI GWGCWC 3 cut(s) 311, 350, 2329
BsiHKCI CYCGRG 5 cut(s) 59, 94, 169, 547, 1171
BsiSI CCGG 3 cut(s) 116, 548, 1582
BslFI GGGAC 2 cut(s) 76, 1972
BslI CCNNNNNNNGG 5 cut(s) 50, 404, 492, 683, 1922
BsmAI GTCTC 1 cut(s) 2059
BsmFI GGGAC 2 cut(s) 76, 1972
BsmI GAATGC 1 cut(s) 1075
BsnI GGCC 5 cut(s) 555, 581, 832, 1006, 1469
BsoBI CYCGRG 5 cut(s) 59, 94, 169, 547, 1171
Bsp1286I GDGCHC 3 cut(s) 311, 350, 2329
Bsp143I GATC 5 cut(s) 240, 394, 1585, 1693, 1912
Bsp1720I GCTNAGC 1 cut(s) 957
Bsp19I CCATGG 1 cut(s) 273
BspANI GGCC 5 cut(s) 555, 581, 832, 1006, 1469
BspCNI CTCAG 7 cut(s) 315, 691, 775, 835, 949, 1252, 2002
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 2 cut(s) 196, 1732
BspMAI CTGCAG 1 cut(s) 1329
BspOI GCTAGC 1 cut(s) 212
BspPI GGATC 6 cut(s) 248, 389, 402, 1593, 1907, 1920
BspQI GCTCTTC 3 cut(s) 668, 752, 1790
BspT107I GGYRCC 1 cut(s) 408
BsrBI CCGCTC 2 cut(s) 684, 768
BsrDI GCAATG 1 cut(s) 1567
BsrI ACTGG 5 cut(s) 219, 257, 889, 1927, 2216
BssMI GATC 5 cut(s) 240, 394, 1585, 1693, 1912
BssNI GRCGYC 4 cut(s) 165, 409, 1749, 2251
BssSI CACGAG 2 cut(s) 632, 716
BssT1I CCWWGG 4 cut(s) 186, 273, 336, 375
Bst2BI CACGAG 2 cut(s) 632, 716
Bst4CI ACNGT 7 cut(s) 138, 194, 570, 839, 953, 1685, 1708
Bst6I CTCTTC 3 cut(s) 668, 752, 1790
BstACI GRCGYC 4 cut(s) 165, 409, 1749, 2251
BstC8I GCNNGC 2 cut(s) 210, 426
BstDEI CTNAG 8 cut(s) 227, 323, 678, 762, 822, 957, 1260, 2010
BstDSI CCRYGG 2 cut(s) 273, 594
BstENI CCTNNNNNAGG 1 cut(s) 402
BstF5I GGATG 4 cut(s) 810, 1731, 1771, 1960
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 2 cut(s) 412, 591
BstHHI GCGC 4 cut(s) 205, 411, 590, 1783
BstKTI GATC 5 cut(s) 243, 397, 1588, 1696, 1915
BstMAI GTCTC 1 cut(s) 2059
BstMBI GATC 5 cut(s) 240, 394, 1585, 1693, 1912
BstMWI GCNNNNNNNGC 9 cut(s) 209, 587, 596, 658, 742, 1009, 1324, 1652, 1856
BstNSI RCATGY 4 cut(s) 1022, 1637, 1965, 2072
BstSCI CCNGG 4 cut(s) 114, 546, 547, 1581
BstSFI CTRYAG 4 cut(s) 244, 1325, 1650, 1704
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1174, 1633, 1986
BstV2I GAAGAC 2 cut(s) 954, 1702
BstX2I RGATCY 4 cut(s) 240, 394, 1693, 1912
BstYI RGATCY 4 cut(s) 240, 394, 1693, 1912
BsuRI GGCC 5 cut(s) 555, 581, 832, 1006, 1469
BtgI CCRYGG 2 cut(s) 273, 594
BtrI CACGTC 1 cut(s) 1870
BtsCI GGATG 4 cut(s) 810, 1731, 1771, 1960
BtsI GCAGTG 1 cut(s) 1322
BtsIMutI CAGTG 7 cut(s) 77, 212, 835, 1242, 1322, 1920, 2327
Cac8I GCNNGC 2 cut(s) 210, 426
CciI TCATGA 2 cut(s) 196, 1732
CfoI GCGC 4 cut(s) 205, 411, 590, 1783
Cfr13I GGNCC 4 cut(s) 41, 831, 1447, 1681
Cfr9I CCCGGG 1 cut(s) 547
CseI GACGC 3 cut(s) 120, 173, 2240
Csp6I GTAC 5 cut(s) 558, 1046, 1114, 1333, 1425
CviQI GTAC 5 cut(s) 558, 1046, 1114, 1333, 1425
DdeI CTNAG 8 cut(s) 227, 323, 678, 762, 822, 957, 1260, 2010
DinI GGCGCC 1 cut(s) 410
DpnI GATC 5 cut(s) 242, 396, 1587, 1695, 1914
DpnII GATC 5 cut(s) 240, 394, 1585, 1693, 1912
DraIII CACNNNGTG 1 cut(s) 140
DrdI GACNNNNNNGTC 1 cut(s) 1966
DseDI GACNNNNNNGTC 1 cut(s) 1966
Eam1104I CTCTTC 3 cut(s) 668, 752, 1790
EarI CTCTTC 3 cut(s) 668, 752, 1790
Eco130I CCWWGG 4 cut(s) 186, 273, 336, 375
Eco147I AGGCCT 1 cut(s) 1469
Eco47I GGWCC 3 cut(s) 41, 1447, 1681
Eco57I CTGAAG 4 cut(s) 641, 725, 1218, 2351
Eco88I CYCGRG 5 cut(s) 59, 94, 169, 547, 1171
EcoNI CCTNNNNNAGG 1 cut(s) 402
EcoO109I RGGNCCY 3 cut(s) 41, 831, 1447
EcoT14I CCWWGG 4 cut(s) 186, 273, 336, 375
EgeI GGCGCC 1 cut(s) 410
EheI GGCGCC 1 cut(s) 410
ErhI CCWWGG 4 cut(s) 186, 273, 336, 375
FalI AAGNNNNNCTT 2 cut(s) 523, 555
FaqI GGGAC 2 cut(s) 76, 1972
FauNDI CATATG 1 cut(s) 1715
FokI GGATG 4 cut(s) 797, 1738, 1778, 1967
FspBI CTAG 9 cut(s) 45, 209, 237, 413, 1074, 1403, 2108, 2168, 2304
GlaI GCGC 4 cut(s) 204, 410, 589, 1782
GsuI CTGGAG 1 cut(s) 236
HaeII RGCGCY 2 cut(s) 412, 591
HaeIII GGCC 5 cut(s) 555, 581, 832, 1006, 1469
HapII CCGG 3 cut(s) 116, 548, 1582
HgaI GACGC 3 cut(s) 120, 173, 2240
HhaI GCGC 4 cut(s) 205, 411, 590, 1783
Hin1I GRCGYC 4 cut(s) 165, 409, 1749, 2251
Hin6I GCGC 4 cut(s) 203, 409, 588, 1781
HinP1I GCGC 4 cut(s) 203, 409, 588, 1781
HincII GTYRAC 3 cut(s) 457, 1084, 1828
HindII GTYRAC 3 cut(s) 457, 1084, 1828
HpaI GTTAAC 2 cut(s) 457, 1084
HpaII CCGG 3 cut(s) 116, 548, 1582
HphI GGTGA 5 cut(s) 701, 808, 838, 1269, 2184
Hpy166II GTNNAC 6 cut(s) 457, 1032, 1084, 1240, 1828, 1928
Hpy8I GTNNAC 6 cut(s) 457, 1032, 1084, 1240, 1828, 1928
Hpy99I CGWCG 2 cut(s) 92, 604
HpyCH4III ACNGT 7 cut(s) 138, 194, 570, 839, 953, 1685, 1708
HpyCH4IV ACGT 4 cut(s) 523, 1423, 1749, 1869
HpyF10VI GCNNNNNNNGC 9 cut(s) 209, 587, 596, 658, 742, 1009, 1324, 1652, 1856
HpyF3I CTNAG 8 cut(s) 227, 323, 678, 762, 822, 957, 1260, 2010
HpySE526I ACGT 4 cut(s) 523, 1423, 1749, 1869
Hsp92I GRCGYC 4 cut(s) 165, 409, 1749, 2251
HspAI GCGC 4 cut(s) 203, 409, 588, 1781
KasI GGCGCC 1 cut(s) 408
KspAI GTTAAC 2 cut(s) 457, 1084
Kzo9I GATC 5 cut(s) 240, 394, 1585, 1693, 1912
LguI GCTCTTC 3 cut(s) 668, 752, 1790
LmnI GCTCC 9 cut(s) 14, 25, 175, 668, 752, 977, 1163, 1826, 2225
Lsp1109I GCAGC 8 cut(s) 96, 217, 639, 723, 830, 1174, 1633, 1986
LweI GCATC 1 cut(s) 1716
MaeI CTAG 9 cut(s) 45, 209, 237, 413, 1074, 1403, 2108, 2168, 2304
MaeII ACGT 4 cut(s) 523, 1423, 1749, 1869
MaeIII GTNAC 5 cut(s) 132, 796, 865, 1275, 2282
MalI GATC 5 cut(s) 242, 396, 1587, 1695, 1914
MbiI CCGCTC 2 cut(s) 684, 768
MboI GATC 5 cut(s) 240, 394, 1585, 1693, 1912
MflI RGATCY 4 cut(s) 240, 394, 1693, 1912
MhlI GDGCHC 3 cut(s) 311, 350, 2329
MluCI AATT 9 cut(s) 280, 613, 1303, 1371, 1491, 1598, 1889, 1984, 2055
MluI ACGCGT 1 cut(s) 129
Mly113I GGCGCC 1 cut(s) 409
MlyI GAGTC 7 cut(s) 86, 1115, 1121, 1183, 1235, 2092, 2348
MmeI TCCRAC 7 cut(s) 832, 879, 1149, 1387, 1415, 1813, 1833
MroXI GAANNNNTTC 4 cut(s) 318, 357, 1598, 2244
MseI TTAA 8 cut(s) 402, 456, 996, 1083, 1155, 1835, 1844, 2096
MslI CAYNNNNRTG 3 cut(s) 1182, 1757, 2197
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 3 cut(s) 116, 548, 1582
MspR9I CCNGG 4 cut(s) 116, 548, 549, 1583
Mva1269I GAATGC 1 cut(s) 1075
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 9 cut(s) 209, 587, 596, 658, 742, 1009, 1324, 1652, 1856
NarI GGCGCC 1 cut(s) 409
NciI CCSGG 4 cut(s) 116, 548, 549, 1583
NcoI CCATGG 1 cut(s) 273
NdeI CATATG 1 cut(s) 1715
NdeII GATC 5 cut(s) 240, 394, 1585, 1693, 1912
NheI GCTAGC 1 cut(s) 208
NmeAIII GCCGAG 2 cut(s) 169, 472
NmuCI GTSAC 4 cut(s) 132, 796, 1275, 2282
NspI RCATGY 4 cut(s) 1022, 1637, 1965, 2072
PaeR7I CTCGAG 1 cut(s) 169
PagI TCATGA 2 cut(s) 196, 1732
PceI AGGCCT 1 cut(s) 1469
PciI ACATGT 1 cut(s) 1961
PciSI GCTCTTC 3 cut(s) 668, 752, 1790
PcsI WCGNNNNNNNCGW 2 cut(s) 87, 444
PctI GAATGC 1 cut(s) 1075
PdmI GAANNNNTTC 4 cut(s) 318, 357, 1598, 2244
PfeI GAWTC 9 cut(s) 35, 67, 256, 461, 482, 1381, 1415, 1700, 2115
PfoI TCCNGGA 1 cut(s) 1581
PleI GAGTC 7 cut(s) 86, 1115, 1121, 1182, 1235, 2091, 2347
PluTI GGCGCC 1 cut(s) 412
PpsI GAGTC 7 cut(s) 86, 1115, 1121, 1182, 1235, 2091, 2347
PpuMI RGGWCCY 2 cut(s) 41, 1447
PscI ACATGT 1 cut(s) 1961
PsiI TTATAA 2 cut(s) 530, 2054
Psp5II RGGWCCY 2 cut(s) 41, 1447
PspPI GGNCC 4 cut(s) 41, 831, 1447, 1681
PspPPI RGGWCCY 2 cut(s) 41, 1447
PspXI VCTCGAGB 1 cut(s) 169
PstI CTGCAG 1 cut(s) 1329
PsuI RGATCY 4 cut(s) 240, 394, 1693, 1912
RsaI GTAC 5 cut(s) 559, 1047, 1115, 1334, 1426
RsaNI GTAC 5 cut(s) 558, 1046, 1114, 1333, 1425
RseI CAYNNNNRTG 3 cut(s) 1182, 1757, 2197
SapI GCTCTTC 3 cut(s) 668, 752, 1790
SaqAI TTAA 8 cut(s) 402, 456, 996, 1083, 1155, 1835, 1844, 2096
Sau3AI GATC 5 cut(s) 240, 394, 1585, 1693, 1912
Sau96I GGNCC 4 cut(s) 41, 831, 1447, 1681
ScaI AGTACT 2 cut(s) 1047, 1115
SchI GAGTC 7 cut(s) 86, 1115, 1121, 1183, 1235, 2092, 2348
ScrFI CCNGG 4 cut(s) 116, 548, 549, 1583
SduI GDGCHC 3 cut(s) 311, 350, 2329
SfaNI GCATC 1 cut(s) 1716
SfcI CTRYAG 4 cut(s) 244, 1325, 1650, 1704
SfoI GGCGCC 1 cut(s) 410
Sfr274I CTCGAG 1 cut(s) 169
SinI GGWCC 3 cut(s) 41, 1447, 1681
SlaI CTCGAG 1 cut(s) 169
SmaI CCCGGG 1 cut(s) 549
SmiMI CAYNNNNRTG 3 cut(s) 1182, 1757, 2197
SmlI CTYRAG 5 cut(s) 169, 1049, 1087, 1628, 2080
SmoI CTYRAG 5 cut(s) 169, 1049, 1087, 1628, 2080
SpeI ACTAGT 1 cut(s) 1402
Sse9I AATT 9 cut(s) 280, 613, 1303, 1371, 1491, 1598, 1889, 1984, 2055
SseBI AGGCCT 1 cut(s) 1469
SspDI GGCGCC 1 cut(s) 408
SspMI CTAG 9 cut(s) 45, 209, 237, 413, 1074, 1403, 2108, 2168, 2304
StuI AGGCCT 1 cut(s) 1469
StyD4I CCNGG 4 cut(s) 114, 546, 547, 1581
StyI CCWWGG 4 cut(s) 186, 273, 336, 375
TaaI ACNGT 7 cut(s) 138, 194, 570, 839, 953, 1685, 1708
TaiI ACGT 4 cut(s) 526, 1426, 1752, 1872
TaqI TCGA 9 cut(s) 87, 170, 640, 724, 1119, 1429, 2118, 2176, 2323
TasI AATT 9 cut(s) 280, 613, 1303, 1371, 1491, 1598, 1889, 1984, 2055
TatI WGTACW 3 cut(s) 1045, 1113, 1332
TauI GCSGC 5 cut(s) 443, 446, 1006, 1821, 2075
TfiI GAWTC 9 cut(s) 35, 67, 256, 461, 482, 1381, 1415, 1700, 2115
Tru1I TTAA 8 cut(s) 402, 456, 996, 1083, 1155, 1835, 1844, 2096
Tru9I TTAA 8 cut(s) 402, 456, 996, 1083, 1155, 1835, 1844, 2096
TscAI CASTG 7 cut(s) 77, 219, 842, 1242, 1329, 1927, 2334
TseFI GTSAC 4 cut(s) 132, 796, 1275, 2282
TseI GCWGC 8 cut(s) 109, 205, 652, 736, 818, 1187, 1646, 1999
Tsp45I GTSAC 4 cut(s) 132, 796, 1275, 2282
TspGWI ACGGA 8 cut(s) 326, 365, 454, 617, 803, 853, 1813, 1925
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 7 cut(s) 77, 219, 842, 1242, 1329, 1927, 2334
VpaK11BI GGWCC 3 cut(s) 41, 1447, 1681
XagI CCTNNNNNAGG 1 cut(s) 402
XapI RAATTY 3 cut(s) 613, 1303, 1984
XceI RCATGY 4 cut(s) 1022, 1637, 1965, 2072
XhoI CTCGAG 1 cut(s) 169
XmaI CCCGGG 1 cut(s) 547
XmnI GAANNNNTTC 4 cut(s) 318, 357, 1598, 2244
XspI CTAG 9 cut(s) 45, 209, 237, 413, 1074, 1403, 2108, 2168, 2304
ZraI GACGTC 1 cut(s) 1750
ZrmI AGTACT 2 cut(s) 1047, 1115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.