F-box FBD LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g17800 |
| rosa_chinensis | RchiOBHm_Chr1g0365081 |
| rosa_laevigata | RLG00000027446 |
| rosa_multiflora | Rmu_sc0022857.1_g000001 Rmu_sc0034521.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00291490 Rroxscaffold_4G00291940 |
| rosa_rugosa | Rorug01G0319400 |
| rosa_samantha | Rh1AG328400 Rh1DG321400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 427 |
| AccI | GTMKAC | 1 cut(s) | 162 |
| AcsI | RAATTY | 3 cut(s) | 210, 331, 454 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 427 |
| AflII | CTTAAG | 1 cut(s) | 35 |
| AgsI | TTSAA | 3 cut(s) | 200, 354, 386 |
| AjiI | CACGTC | 1 cut(s) | 16 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 201, 233 |
| ApoI | RAATTY | 3 cut(s) | 210, 331, 454 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 455 |
| AsuHPI | GGTGA | 4 cut(s) | 19, 39, 167, 323 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 150, 182 |
| BccI | CCATC | 1 cut(s) | 229 |
| BfaI | CTAG | 1 cut(s) | 206 |
| BfrI | CTTAAG | 1 cut(s) | 35 |
| BglII | AGATCT | 1 cut(s) | 173 |
| BmgBI | CACGTC | 1 cut(s) | 16 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 364, 396 |
| BpuEI | CTTGAG | 1 cut(s) | 389 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 39, 69, 79, 109 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 427 |
| Bse1I | ACTGG | 2 cut(s) | 263, 304 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 3 cut(s) | 336, 381, 476 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 427 |
| BseMII | CTCAG | 1 cut(s) | 184 |
| BseNI | ACTGG | 2 cut(s) | 263, 304 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 427 |
| Bsp143I | GATC | 1 cut(s) | 173 |
| BspCNI | CTCAG | 1 cut(s) | 183 |
| BspTI | CTTAAG | 1 cut(s) | 35 |
| BsrI | ACTGG | 2 cut(s) | 263, 304 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssMI | GATC | 1 cut(s) | 173 |
| Bst6I | CTCTTC | 3 cut(s) | 14, 201, 387 |
| BstAFI | CTTAAG | 1 cut(s) | 35 |
| BstDEI | CTNAG | 1 cut(s) | 170 |
| BstDSI | CCRYGG | 1 cut(s) | 142 |
| BstF5I | GGATG | 3 cut(s) | 336, 381, 476 |
| BstKTI | GATC | 1 cut(s) | 176 |
| BstMBI | GATC | 1 cut(s) | 173 |
| BstNSI | RCATGY | 1 cut(s) | 446 |
| BstX2I | RGATCY | 1 cut(s) | 173 |
| BstYI | RGATCY | 1 cut(s) | 173 |
| BtgI | CCRYGG | 1 cut(s) | 142 |
| BtrI | CACGTC | 1 cut(s) | 16 |
| BtsCI | GGATG | 3 cut(s) | 336, 381, 476 |
| CviAII | CATG | 1 cut(s) | 443 |
| DdeI | CTNAG | 1 cut(s) | 170 |
| DpnI | GATC | 1 cut(s) | 175 |
| DpnII | GATC | 1 cut(s) | 173 |
| DraI | TTTAAA | 1 cut(s) | 291 |
| Eam1104I | CTCTTC | 3 cut(s) | 14, 201, 387 |
| EarI | CTCTTC | 3 cut(s) | 14, 201, 387 |
| FaeI | CATG | 1 cut(s) | 446 |
| FaiI | YATR | 5 cut(s) | 10, 125, 179, 438, 444 |
| FatI | CATG | 1 cut(s) | 442 |
| FblI | GTMKAC | 1 cut(s) | 162 |
| FokI | GGATG | 3 cut(s) | 323, 388, 463 |
| FspBI | CTAG | 1 cut(s) | 206 |
| Hin1II | CATG | 1 cut(s) | 446 |
| HincII | GTYRAC | 1 cut(s) | 471 |
| HindII | GTYRAC | 1 cut(s) | 471 |
| HinfI | GANTC | 4 cut(s) | 4, 44, 314, 379 |
| HphI | GGTGA | 4 cut(s) | 19, 39, 167, 323 |
| Hpy166II | GTNNAC | 2 cut(s) | 163, 471 |
| Hpy188I | TCNGA | 3 cut(s) | 173, 319, 341 |
| Hpy188III | TCNNGA | 3 cut(s) | 200, 354, 494 |
| Hpy8I | GTNNAC | 2 cut(s) | 163, 471 |
| HpyAV | CCTTC | 3 cut(s) | 41, 399, 425 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 1 cut(s) | 267 |
| HpyF3I | CTNAG | 1 cut(s) | 170 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Hsp92II | CATG | 1 cut(s) | 446 |
| Kzo9I | GATC | 1 cut(s) | 173 |
| LpnPI | CCDG | 6 cut(s) | 120, 244, 285, 294, 375, 479 |
| MaeI | CTAG | 1 cut(s) | 206 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MaeIII | GTNAC | 2 cut(s) | 11, 25 |
| MalI | GATC | 1 cut(s) | 175 |
| MboI | GATC | 1 cut(s) | 173 |
| MboII | GAAGA | 5 cut(s) | 31, 188, 374, 384, 460 |
| MflI | RGATCY | 1 cut(s) | 173 |
| MluCI | AATT | 6 cut(s) | 59, 128, 210, 262, 331, 454 |
| MlyI | GAGTC | 1 cut(s) | 373 |
| MmeI | TCCRAC | 3 cut(s) | 65, 297, 408 |
| MnlI | CCTC | 3 cut(s) | 144, 199, 366 |
| MroXI | GAANNNNTTC | 1 cut(s) | 455 |
| MseI | TTAA | 7 cut(s) | 36, 66, 99, 131, 245, 290, 502 |
| MspCI | CTTAAG | 1 cut(s) | 35 |
| NdeII | GATC | 1 cut(s) | 173 |
| NlaIII | CATG | 1 cut(s) | 446 |
| NmuCI | GTSAC | 2 cut(s) | 11, 25 |
| NspI | RCATGY | 1 cut(s) | 446 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 79 |
| PdmI | GAANNNNTTC | 1 cut(s) | 455 |
| PfeI | GAWTC | 2 cut(s) | 44, 314 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 427 |
| PleI | GAGTC | 1 cut(s) | 373 |
| PpsI | GAGTC | 1 cut(s) | 373 |
| PsuI | RGATCY | 1 cut(s) | 173 |
| SaqAI | TTAA | 7 cut(s) | 36, 66, 99, 131, 245, 290, 502 |
| Sau3AI | GATC | 1 cut(s) | 173 |
| SchI | GAGTC | 1 cut(s) | 373 |
| SetI | ASST | 7 cut(s) | 18, 139, 191, 279, 364, 391, 436 |
| SmlI | CTYRAG | 2 cut(s) | 35, 368 |
| SmoI | CTYRAG | 2 cut(s) | 35, 368 |
| Sse9I | AATT | 6 cut(s) | 59, 128, 210, 262, 331, 454 |
| SspMI | CTAG | 1 cut(s) | 206 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TaqI | TCGA | 1 cut(s) | 73 |
| TasI | AATT | 6 cut(s) | 59, 128, 210, 262, 331, 454 |
| TfiI | GAWTC | 2 cut(s) | 44, 314 |
| Tru1I | TTAA | 7 cut(s) | 36, 66, 99, 131, 245, 290, 502 |
| Tru9I | TTAA | 7 cut(s) | 36, 66, 99, 131, 245, 290, 502 |
| TseFI | GTSAC | 2 cut(s) | 11, 25 |
| Tsp45I | GTSAC | 2 cut(s) | 11, 25 |
| TspDTI | ATGAA | 6 cut(s) | 140, 204, 325, 448, 465, 479 |
| TspGWI | ACGGA | 1 cut(s) | 131 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 427 |
| Vha464I | CTTAAG | 1 cut(s) | 35 |
| XapI | RAATTY | 3 cut(s) | 210, 331, 454 |
| XceI | RCATGY | 1 cut(s) | 446 |
| XmiI | GTMKAC | 1 cut(s) | 162 |
| XmnI | GAANNNNTTC | 1 cut(s) | 455 |
| XspI | CTAG | 1 cut(s) | 206 |