F-box FBD LRR-repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g17800 |
| rosa_chinensis | RchiOBHm_Chr1g0365081 |
| rosa_laevigata | RLG00000027446 |
| rosa_multiflora | Rmu_sc0022857.1_g000001 Rmu_sc0034521.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00291490 Rroxscaffold_4G00291940 |
| rosa_rugosa | Rorug01G0319400 |
| rosa_samantha | Rh1AG328400 Rh1DG321400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 333 |
| AccII | CGCG | 1 cut(s) | 670 |
| AcsI | RAATTY | 1 cut(s) | 803 |
| AcuI | CTGAAG | 1 cut(s) | 806 |
| AfaI | GTAC | 1 cut(s) | 858 |
| AflII | CTTAAG | 1 cut(s) | 746 |
| AflIII | ACRYGT | 1 cut(s) | 668 |
| AluBI | AGCT | 4 cut(s) | 282, 346, 682, 826 |
| AluI | AGCT | 4 cut(s) | 282, 346, 682, 826 |
| Alw26I | GTCTC | 3 cut(s) | 223, 372, 677 |
| AoxI | GGCC | 2 cut(s) | 325, 571 |
| ApeKI | GCWGC | 2 cut(s) | 279, 826 |
| ApoI | RAATTY | 1 cut(s) | 803 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 350, 382, 453, 485 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 119 |
| AspS9I | GGNCC | 3 cut(s) | 326, 571, 632 |
| AsuC2I | CCSGG | 1 cut(s) | 560 |
| AsuII | TTCGAA | 2 cut(s) | 92, 583 |
| AvaII | GGWCC | 1 cut(s) | 632 |
| BbsI | GAAGAC | 2 cut(s) | 79, 122 |
| BbvI | GCAGC | 2 cut(s) | 291, 813 |
| BccI | CCATC | 2 cut(s) | 58, 776 |
| BcnI | CCSGG | 1 cut(s) | 560 |
| BcoDI | GTCTC | 3 cut(s) | 223, 372, 677 |
| BfaI | CTAG | 2 cut(s) | 371, 378 |
| BfmI | CTRYAG | 1 cut(s) | 330 |
| BfrI | CTTAAG | 1 cut(s) | 746 |
| BisI | GCNGC | 2 cut(s) | 280, 827 |
| BlsI | GCNGC | 2 cut(s) | 281, 828 |
| Bme1390I | CCNGG | 1 cut(s) | 560 |
| Bme18I | GGWCC | 1 cut(s) | 632 |
| BmgT120I | GGNCC | 3 cut(s) | 326, 571, 632 |
| BmrFI | CCNGG | 1 cut(s) | 560 |
| BmsI | GCATC | 1 cut(s) | 595 |
| BpiI | GAAGAC | 2 cut(s) | 79, 122 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 619, 651, 637, 669 |
| BpmI | CTGGAG | 1 cut(s) | 781 |
| Bpu14I | TTCGAA | 2 cut(s) | 92, 583 |
| BpuEI | CTTGAG | 2 cut(s) | 585, 662 |
| BpuMI | CCSGG | 1 cut(s) | 560 |
| BsaBI | GATNNNNATC | 2 cut(s) | 82, 387 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 687, 717 |
| Bse1I | ACTGG | 2 cut(s) | 328, 798 |
| Bse8I | GATNNNNATC | 2 cut(s) | 82, 387 |
| BseJI | GATNNNNATC | 2 cut(s) | 82, 387 |
| BseMII | CTCAG | 2 cut(s) | 74, 692 |
| BseNI | ACTGG | 2 cut(s) | 328, 798 |
| BseXI | GCAGC | 2 cut(s) | 291, 813 |
| Bsh1236I | CGCG | 1 cut(s) | 670 |
| Bsh1285I | CGRYCG | 1 cut(s) | 80 |
| BshFI | GGCC | 2 cut(s) | 327, 573 |
| BsiEI | CGRYCG | 1 cut(s) | 80 |
| BsiSI | CCGG | 1 cut(s) | 559 |
| BslFI | GGGAC | 1 cut(s) | 806 |
| BsmAI | GTCTC | 3 cut(s) | 223, 372, 677 |
| BsmBI | CGTCTC | 1 cut(s) | 677 |
| BsmFI | GGGAC | 1 cut(s) | 806 |
| BsnI | GGCC | 2 cut(s) | 327, 573 |
| Bsp119I | TTCGAA | 2 cut(s) | 92, 583 |
| Bsp143I | GATC | 4 cut(s) | 37, 77, 388, 621 |
| BspANI | GGCC | 2 cut(s) | 327, 573 |
| BspCNI | CTCAG | 2 cut(s) | 73, 691 |
| BspFNI | CGCG | 1 cut(s) | 670 |
| BspT104I | TTCGAA | 2 cut(s) | 92, 583 |
| BspTI | CTTAAG | 1 cut(s) | 746 |
| BsrI | ACTGG | 2 cut(s) | 328, 798 |
| BssMI | GATC | 4 cut(s) | 37, 77, 388, 621 |
| Bst4CI | ACNGT | 2 cut(s) | 274, 595 |
| Bst6I | CTCTTC | 3 cut(s) | 94, 580, 642 |
| BstAFI | CTTAAG | 1 cut(s) | 746 |
| BstBI | TTCGAA | 2 cut(s) | 92, 583 |
| BstDEI | CTNAG | 2 cut(s) | 60, 678 |
| BstFNI | CGCG | 1 cut(s) | 670 |
| BstKTI | GATC | 4 cut(s) | 40, 80, 391, 624 |
| BstMAI | GTCTC | 3 cut(s) | 223, 372, 677 |
| BstMBI | GATC | 4 cut(s) | 37, 77, 388, 621 |
| BstMCI | CGRYCG | 1 cut(s) | 80 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 605 |
| BstSCI | CCNGG | 1 cut(s) | 558 |
| BstSFI | CTRYAG | 1 cut(s) | 330 |
| BstUI | CGCG | 1 cut(s) | 670 |
| BstV1I | GCAGC | 2 cut(s) | 291, 813 |
| BstV2I | GAAGAC | 2 cut(s) | 79, 122 |
| BsuRI | GGCC | 2 cut(s) | 327, 573 |
| BtsI | GCAGTG | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 4 cut(s) | 204, 321, 600, 805 |
| Cfr13I | GGNCC | 3 cut(s) | 326, 571, 632 |
| CseI | GACGC | 2 cut(s) | 344, 659 |
| Csp6I | GTAC | 1 cut(s) | 857 |
| CviAII | CATG | 2 cut(s) | 225, 305 |
| CviQI | GTAC | 1 cut(s) | 857 |
| DdeI | CTNAG | 2 cut(s) | 60, 678 |
| DpnI | GATC | 4 cut(s) | 39, 79, 390, 623 |
| DpnII | GATC | 4 cut(s) | 37, 77, 388, 621 |
| Eam1104I | CTCTTC | 3 cut(s) | 94, 580, 642 |
| EarI | CTCTTC | 3 cut(s) | 94, 580, 642 |
| Eco32I | GATATC | 1 cut(s) | 57 |
| Eco47I | GGWCC | 1 cut(s) | 632 |
| Eco57I | CTGAAG | 1 cut(s) | 806 |
| EcoO109I | RGGNCCY | 1 cut(s) | 571 |
| EcoRI | GAATTC | 1 cut(s) | 803 |
| EcoRV | GATATC | 1 cut(s) | 57 |
| Esp3I | CGTCTC | 1 cut(s) | 677 |
| FaeI | CATG | 2 cut(s) | 228, 308 |
| FaqI | GGGAC | 1 cut(s) | 806 |
| FatI | CATG | 2 cut(s) | 224, 304 |
| FblI | GTMKAC | 1 cut(s) | 333 |
| Fnu4HI | GCNGC | 2 cut(s) | 280, 827 |
| Fsp4HI | GCNGC | 2 cut(s) | 280, 827 |
| FspBI | CTAG | 2 cut(s) | 371, 378 |
| GluI | GCNGC | 2 cut(s) | 280, 827 |
| GsuI | CTGGAG | 1 cut(s) | 781 |
| HaeIII | GGCC | 2 cut(s) | 327, 573 |
| HapII | CCGG | 1 cut(s) | 559 |
| HgaI | GACGC | 2 cut(s) | 344, 659 |
| Hin1II | CATG | 2 cut(s) | 228, 308 |
| HindIII | AAGCTT | 1 cut(s) | 344 |
| HinfI | GANTC | 4 cut(s) | 502, 652, 700, 794 |
| HpaII | CCGG | 1 cut(s) | 559 |
| Hpy166II | GTNNAC | 2 cut(s) | 334, 543 |
| Hpy188I | TCNGA | 2 cut(s) | 63, 743 |
| Hpy188III | TCNNGA | 6 cut(s) | 371, 494, 602, 625, 641, 734 |
| Hpy8I | GTNNAC | 2 cut(s) | 334, 543 |
| HpyAV | CCTTC | 2 cut(s) | 562, 584 |
| HpyCH4III | ACNGT | 2 cut(s) | 274, 595 |
| HpyCH4IV | ACGT | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 4 cut(s) | 184, 356, 519, 695 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 605 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 678 |
| HpySE526I | ACGT | 1 cut(s) | 119 |
| Hsp92II | CATG | 2 cut(s) | 228, 308 |
| Kzo9I | GATC | 4 cut(s) | 37, 77, 388, 621 |
| LmnI | GCTCC | 1 cut(s) | 287 |
| LpnPI | CCDG | 5 cut(s) | 309, 342, 572, 719, 811 |
| Lsp1109I | GCAGC | 2 cut(s) | 291, 813 |
| LweI | GCATC | 1 cut(s) | 595 |
| MaeI | CTAG | 2 cut(s) | 371, 378 |
| MaeII | ACGT | 1 cut(s) | 119 |
| MaeIII | GTNAC | 3 cut(s) | 413, 589, 659 |
| MalI | GATC | 4 cut(s) | 39, 79, 390, 623 |
| MboI | GATC | 4 cut(s) | 37, 77, 388, 621 |
| MfeI | CAATTG | 2 cut(s) | 520, 777 |
| MluCI | AATT | 8 cut(s) | 294, 440, 520, 707, 777, 803, 849, 864 |
| MluI | ACGCGT | 1 cut(s) | 668 |
| MlyI | GAGTC | 3 cut(s) | 496, 646, 788 |
| MmeI | TCCRAC | 2 cut(s) | 108, 591 |
| MnlI | CCTC | 6 cut(s) | 97, 187, 262, 546, 645, 716 |
| MroXI | GAANNNNTTC | 1 cut(s) | 119 |
| MseI | TTAA | 4 cut(s) | 23, 714, 747, 852 |
| MspA1I | CMGCKG | 1 cut(s) | 826 |
| MspCI | CTTAAG | 1 cut(s) | 746 |
| MspI | CCGG | 1 cut(s) | 559 |
| MspR9I | CCNGG | 1 cut(s) | 560 |
| MunI | CAATTG | 2 cut(s) | 520, 777 |
| MvnI | CGCG | 1 cut(s) | 670 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 605 |
| NciI | CCSGG | 1 cut(s) | 560 |
| NdeII | GATC | 4 cut(s) | 37, 77, 388, 621 |
| NlaIII | CATG | 2 cut(s) | 228, 308 |
| NmuCI | GTSAC | 1 cut(s) | 659 |
| NspV | TTCGAA | 2 cut(s) | 92, 583 |
| PdmI | GAANNNNTTC | 1 cut(s) | 119 |
| PfeI | GAWTC | 1 cut(s) | 700 |
| PkrI | GCNGC | 2 cut(s) | 281, 828 |
| Ple19I | CGATCG | 1 cut(s) | 80 |
| PleI | GAGTC | 3 cut(s) | 496, 646, 788 |
| PpsI | GAGTC | 3 cut(s) | 496, 646, 788 |
| PspPI | GGNCC | 3 cut(s) | 326, 571, 632 |
| PvuI | CGATCG | 1 cut(s) | 80 |
| PvuII | CAGCTG | 1 cut(s) | 826 |
| RsaI | GTAC | 1 cut(s) | 858 |
| RsaNI | GTAC | 1 cut(s) | 857 |
| SaqAI | TTAA | 4 cut(s) | 23, 714, 747, 852 |
| SatI | GCNGC | 2 cut(s) | 280, 827 |
| Sau3AI | GATC | 4 cut(s) | 37, 77, 388, 621 |
| Sau96I | GGNCC | 3 cut(s) | 326, 571, 632 |
| SchI | GAGTC | 3 cut(s) | 496, 646, 788 |
| ScrFI | CCNGG | 1 cut(s) | 560 |
| SetI | ASST | 9 cut(s) | 122, 284, 348, 364, 538, 684, 727, 828, 858 |
| SfaNI | GCATC | 1 cut(s) | 595 |
| SfcI | CTRYAG | 1 cut(s) | 330 |
| SfuI | TTCGAA | 2 cut(s) | 92, 583 |
| SinI | GGWCC | 1 cut(s) | 632 |
| SmlI | CTYRAG | 3 cut(s) | 600, 641, 746 |
| SmoI | CTYRAG | 3 cut(s) | 600, 641, 746 |
| Sse9I | AATT | 8 cut(s) | 294, 440, 520, 707, 777, 803, 849, 864 |
| SspMI | CTAG | 2 cut(s) | 371, 378 |
| StyD4I | CCNGG | 1 cut(s) | 558 |
| TaaI | ACNGT | 2 cut(s) | 274, 595 |
| TaiI | ACGT | 1 cut(s) | 122 |
| TaqI | TCGA | 7 cut(s) | 36, 80, 92, 218, 410, 583, 624 |
| TasI | AATT | 8 cut(s) | 294, 440, 520, 707, 777, 803, 849, 864 |
| TfiI | GAWTC | 1 cut(s) | 700 |
| Tru1I | TTAA | 4 cut(s) | 23, 714, 747, 852 |
| Tru9I | TTAA | 4 cut(s) | 23, 714, 747, 852 |
| TscAI | CASTG | 4 cut(s) | 204, 328, 600, 805 |
| TseFI | GTSAC | 1 cut(s) | 659 |
| TseI | GCWGC | 2 cut(s) | 279, 826 |
| Tsp45I | GTSAC | 1 cut(s) | 659 |
| TspDTI | ATGAA | 1 cut(s) | 566 |
| TspGWI | ACGGA | 1 cut(s) | 528 |
| TspRI | CASTG | 4 cut(s) | 204, 328, 600, 805 |
| Vha464I | CTTAAG | 1 cut(s) | 746 |
| VpaK11BI | GGWCC | 1 cut(s) | 632 |
| XapI | RAATTY | 1 cut(s) | 803 |
| XbaI | TCTAGA | 1 cut(s) | 370 |
| XmiI | GTMKAC | 1 cut(s) | 333 |
| XmnI | GAANNNNTTC | 1 cut(s) | 119 |
| XspI | CTAG | 2 cut(s) | 371, 378 |