FvH4_4g19300

DUF761-associated sequence motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0004581
Physical Location & Seq
Forward (+)
22995202 .. 23000394
5193 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g19300.t3

Sequence Viewer

Length: 2847 bp
ATGGGAGTTGAAAAGGAAGGTGTTAGAAATGGATCAGGACATGTGGGTGGTTTCTTTCAGCTGTTTGACTGGTCTTCAAAATCTCGAAAAAAGTTATTCTCTAGCAAGTCAGAATTACCAGAACGTTCAAAACAAGGAAAGAAAGGCTATGGGAACTTTCCAGTGATGCGGAATCATCCGGTTGATGAGGATGAAACTGGGGTAACGAGTTTCAAAGGTGGCAGTGACTATAGCTGTGCTTCATCGGTTACAGATGAAGAAGGATATGGATCTAAAGCCCCTAGTGTAGTTGCCAGGCTAATGGGGTTGGACTCATTACCCCCATCCAATGTTGTTGAGCCCTACTCTTCCCCATTTTTTGAAACTCAGTCTTTCCAAGATGCTCCTTACCACAGGAAAAATGTTGATTATTATCATGATCATCAGTTGATGTTTTCTGGAAACCTTCTTATGGAGGGCCCTACCAGGACTACTGTGGAGCCAAAGGCCCAGAAGGTGCATAGCAGACCAATCGAGAAGTTCCAAACTGAAATGTTGCCTCCTAGATCAGCCAAGTCTATCCCAATTACACACCATAAACTTTTGTCTCCTATTAAAAATCCCGGCTTTGTTCCCACTAAGACTGCTGCTCACATAATGGAAGCTGCTGCAAGAATGATTGAGCCTGGACCGCAAGCTAGTGTCAAGGCGAAAATGCCTCTAGTAGGGTCTTCTTCTGCACCATTAAAGGTTCAAGCTCTCAAGGAAAAGGCAGAGGCTTCTCGGAAAGTGACACTGGTTGGGTCATCTTCAGAAACCTTCAAAGTCCGAGATTCAACAGAGAAAGTGGATGGTACTTATAAGATATCTAGGCCTCCAGAAGTGTCTCAGAAGCCAGTTGAGTCAAATGCTTCTAAGTACCTTAAGGGTCAGTCTTTAAACAAGAGCTGGAATGGATCTATAGATATGTCCTTCAGAGCTCCGTCTGATACAGAAGAAGACACTTCAAAGAATAAAGGAAAGTCGATTTCTCTTGCAATACAAGCAAAAGTCAATGTGCAGAAAAGAGGTCAGAATTCAAGTAGAAATAGAAGCTTGGTGGGTCAGAGAGAACAAAATGAGGCCAGCTCAACCCAGTCCTTCAGGAGCCAACCAAATGTTCAAAAGAACTTACATAGGAAACCTTCTGCTCATAATGCTTCTGGAGCTCTTAAGCAGAACAATCAAAAACAAAATAGTCTAATGGATAAAGACAAATTACCTTCAAAACCTTTGGCTTCCAACTCGCAGGTCAGAAAAGCGCTTTCTGGTGATTCTTCTTCCGGGCGTCACAAAAGCTCAATTCGAAGTAGTGGAAACTCCAAAGTTGGATCGAGGAAGTTGAGCTTAGAGGCATCAGATAGTGCAAAAGAAGTTTCTTATTCAAATACAACGAGTTACACTCGGAAGAAGCGAACAATAGATGGGAACTTCCATTTTAATAAAGACTGCGTTGTTGATGATATGTTGAGTGACAAAAATCAGAAGCCAGTTCAATCTAATTCAGTTAATGACAGACAATATTGTTGGTCTGAAGATTGCAAAAAGAAAGGTGGTATGGATGTCGTTTCATTTACATTCACAGCCCCTCTTACACGATCATTTCCTGGGACTGAAATCCCTGTTCAGGTCACTCCGAAGAATAACAGTATTTGCATGGATCACCGTGGTAAAAGATTGTTGCTTGACACTGATAGTATGAAGCTATCTTCACTTGGTTACAATGTGATAGGAGGTGATGCTTTGAGTATGCTTTTGGAACAAAAGTTGAAAGAATTGTCTTATGGAACTGAATCTTCCTCTAGTCGCGACTCTGTGAAAATAGGATCAAGTTCAACTGTTTCTAATGGAGATGTGGACTCCTATTTTAATGCAGCTACTGCTAGGAAAAGAGTAAATGACGAGAGAGACCAACATCTGTTTGTTACAGACAAATTGGGTGGCCGGTATGACTCTGAATTTTCATCCACTGACACTGCTGCTTTCAGATCTAAAGACAAGTTTCAGGGAGTTGATAGGGTGGATGAGTATAGCAGCAGTCATATTGATTCTGGACAGATGCTTAGTTGCCGACACCCTAGTCCAGTCTCAATTTTGGAACCCTCTTTTTCATATGAAAGTTACGACTCGTCAGTTGGCAGCGATAGTAATAGCACAGAAGCAAGCAAGTTATGTTCTTCCATTCGAGCTCGAGAAGTTAATGGTTTAAGTTCTTCAAAGAAGTTCCATTCCATAGAAGCTGATACCGAGTTATCAGATTCTGCTTCTTCCACCGCCACTGGAACTGTGGGAAGACACCATGCAGCTACAGTACACATGCCAAATCCTTCGAGATCAGATGAGTGGGAGTTGGGGTACATAAAGGAGACACTGTGTAATGTGGAATTCATGTTTCAGGACTTCGCATTGGGTCGATCCCACGAGATCATAAACCCTCATCTGTTCAATCTGTTGGAGAGTCGAAGAGGACGTTTTGAAAAAGATGGTGGCAATTCCAAGCTAAGGCGAAAGGAATTATTTGATTGTACAAGTGAATGCTTGGACTTTCGATGCAGGCGTTATGTGGGTGGGGGATACAAAGCATGGGTGAAAGGCACAGCCATGGTGAGAAGAAAGGACATCTTAGCAGAAGAATTCTACAAAGAATTCTTAGCTTTAATGAGCATGGGGGATTGTATGGTGGACGAGCTCGTGAACAAGGACATGACCAGCCAGTATGTAAGATGGCTCGAATTTGAAGCTGATGAATTTGCAGTCGGAGTTGAGATTGAGGATCAAATTTTTAATTCTTTGGTCGATGAAGTGGTTGCTGATATCCTGAAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

949

Amino Acids

105.01

Weight (kDa)

8.86

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 690 - 840 9.1e-30 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 840, 2845
AasI GACNNNNNNGTC 1 cut(s) 2097
Acc36I ACCTGC 1 cut(s) 1258
AccII CGCG 1 cut(s) 1827
AciI CCGC 3 cut(s) 169, 671, 2292
AclI AACGTT 1 cut(s) 124
AclWI GGATC 8 cut(s) 40, 277, 943, 1357, 1686, 1852, 2427, 2799
AcoI YGGCCR 1 cut(s) 1960
AcsI RAATTY 8 cut(s) 1054, 1976, 2402, 2651, 2663, 2750, 2765, 2796
AcuI CTGAAG 4 cut(s) 774, 937, 1105, 1572
AcyI GRCGYC 1 cut(s) 1306
AfaI GTAC 5 cut(s) 835, 899, 2331, 2375, 2545
AfeI AGCGCT 1 cut(s) 1281
AfiI CCNNNNNNNGG 4 cut(s) 451, 704, 1645, 2520
AflII CTTAAG 2 cut(s) 902, 1190
AflIII ACRYGT 1 cut(s) 40
AjnI CCWGG 4 cut(s) 293, 464, 664, 1624
AjuI GAANNNNNNNTTGG 2 cut(s) 1122, 1154
Alw21I GWGCWC 4 cut(s) 961, 1189, 2209, 2709
Alw26I GTCTC 5 cut(s) 591, 870, 1920, 2110, 2378
AlwI GGATC 8 cut(s) 40, 277, 943, 1357, 1686, 1852, 2427, 2799
AlwNI CAGNNNCTG 2 cut(s) 1898, 2279
Ama87I CYCGRG 1 cut(s) 2208
Aor51HI AGCGCT 1 cut(s) 1281
AoxI GGCC 5 cut(s) 457, 486, 851, 1101, 1960
ApaI GGGCCC 1 cut(s) 461
ApeKI GCWGC 8 cut(s) 626, 644, 647, 1892, 1997, 2052, 2157, 2321
ApoI RAATTY 8 cut(s) 1054, 1976, 2402, 2651, 2663, 2750, 2765, 2796
AspLEI GCGC 1 cut(s) 1282
AspS9I GGNCC 4 cut(s) 457, 458, 487, 668
AsuC2I CCSGG 2 cut(s) 603, 1303
AsuHPI GGTGA 5 cut(s) 1301, 1673, 1766, 2617, 2635
AsuII TTCGAA 1 cut(s) 1324
AvaI CYCGRG 1 cut(s) 2208
AvaII GGWCC 1 cut(s) 668
BaeGI GKGCMC 1 cut(s) 461
BanII GRGCYC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
BauI CACGAG 2 cut(s) 2438, 2708
BbsI GAAGAC 4 cut(s) 66, 702, 984, 2317
Bbv12I GWGCWC 4 cut(s) 961, 1189, 2209, 2709
BbvI GCAGC 8 cut(s) 613, 631, 634, 1904, 1984, 2064, 2169, 2333
BccI CCATC 5 cut(s) 331, 824, 1436, 2495, 2736
BcgI CGANNNNNNTGC 2 cut(s) 493, 527
BciT130I CCWGG 4 cut(s) 295, 466, 666, 1626
BciVI GTATCC 1 cut(s) 2585
BclI TGATCA 1 cut(s) 418
BcnI CCSGG 2 cut(s) 603, 1303
BcoDI GTCTC 5 cut(s) 591, 870, 1920, 2110, 2378
BfaI CTAG 9 cut(s) 102, 282, 543, 678, 701, 849, 1821, 1902, 2097
BfmI CTRYAG 3 cut(s) 229, 939, 2325
BfoI RGCGCY 1 cut(s) 1283
BfrI CTTAAG 2 cut(s) 902, 1190
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 1 cut(s) 2585
BglII AGATCT 1 cut(s) 2006
BisI GCNGC 8 cut(s) 627, 645, 648, 1893, 1998, 2053, 2158, 2322
BlsI GCNGC 8 cut(s) 628, 646, 649, 1894, 1999, 2054, 2159, 2323
Bme1390I CCNGG 6 cut(s) 295, 466, 603, 666, 1303, 1626
Bme18I GGWCC 1 cut(s) 668
BmeT110I CYCGRG 1 cut(s) 2208
BmgT120I GGNCC 4 cut(s) 457, 458, 487, 668
BmiI GGNNCC 4 cut(s) 459, 480, 1127, 2118
BmrFI CCNGG 6 cut(s) 295, 466, 603, 666, 1303, 1626
BmrI ACTGGG 2 cut(s) 207, 1108
BmsI GCATC 6 cut(s) 156, 370, 1382, 1747, 2067, 2558
BmuI ACTGGG 2 cut(s) 207, 1108
BpiI GAAGAC 4 cut(s) 66, 702, 984, 2317
BplI GAGNNNNNCTC 6 cut(s) 329, 361, 1091, 1123, 1405, 1437
BpmI CTGGAG 2 cut(s) 840, 1203
Bpu10I CCTNAGC 1 cut(s) 2519
Bpu14I TTCGAA 1 cut(s) 1324
BpuEI CTTGAG 1 cut(s) 725
BpuMI CCSGG 2 cut(s) 603, 1303
BsaBI GATNNNNATC 2 cut(s) 268, 411
BsaHI GRCGYC 1 cut(s) 1306
BsaI GGTCTC 1 cut(s) 1920
BsaJI CCNNGG 3 cut(s) 1625, 1684, 2619
BsaWI WCCGGW 1 cut(s) 178
BsaXI ACNNNNNCTCC 4 cut(s) 2357, 2375, 2387, 2405
Bsc4I CCNNNNNNNGG 4 cut(s) 451, 704, 1645, 2520
Bse118I RCCGGY 1 cut(s) 1962
Bse8I GATNNNNATC 2 cut(s) 268, 411
BseBI CCWGG 4 cut(s) 295, 466, 666, 1626
BseDI CCNNGG 3 cut(s) 1625, 1684, 2619
BseGI GGATG 7 cut(s) 175, 196, 323, 835, 1585, 1982, 2047
BseJI GATNNNNATC 2 cut(s) 268, 411
BseLI CCNNNNNNNGG 4 cut(s) 451, 704, 1645, 2520
BseMII CTCAG 2 cut(s) 380, 881
BseSI GKGCMC 1 cut(s) 461
BseXI GCAGC 8 cut(s) 613, 631, 634, 1904, 1984, 2064, 2169, 2333
BsgI GTGCAG 2 cut(s) 702, 1058
Bsh1236I CGCG 1 cut(s) 1827
BshFI GGCC 5 cut(s) 459, 488, 853, 1103, 1962
BsiHKAI GWGCWC 4 cut(s) 961, 1189, 2209, 2709
BsiHKCI CYCGRG 1 cut(s) 2208
BsiSI CCGG 4 cut(s) 179, 603, 1302, 1963
BslFI GGGAC 1 cut(s) 1642
BslI CCNNNNNNNGG 4 cut(s) 451, 704, 1645, 2520
BsmAI GTCTC 5 cut(s) 591, 870, 1920, 2110, 2378
BsmFI GGGAC 1 cut(s) 1642
BsmI GAATGC 1 cut(s) 2558
BsnI GGCC 5 cut(s) 459, 488, 853, 1103, 1962
Bso31I GGTCTC 1 cut(s) 1920
BsoBI CYCGRG 1 cut(s) 2208
Bsp119I TTCGAA 1 cut(s) 1324
Bsp120I GGGCCC 1 cut(s) 457
Bsp1286I GDGCHC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
Bsp1407I TGTACA 1 cut(s) 2543
Bsp19I CCATGG 1 cut(s) 2619
Bsp68I TCGCGA 1 cut(s) 1827
BspACI CCGC 3 cut(s) 169, 671, 2292
BspANI GGCC 5 cut(s) 459, 488, 853, 1103, 1962
BspCNI CTCAG 2 cut(s) 379, 880
BspFNI CGCG 1 cut(s) 1827
BspHI TCATGA 1 cut(s) 415
BspLI GGNNCC 4 cut(s) 459, 480, 1127, 2118
BspMI ACCTGC 1 cut(s) 1258
BspPI GGATC 8 cut(s) 40, 277, 943, 1357, 1686, 1852, 2427, 2799
BspT104I TTCGAA 1 cut(s) 1324
BspTI CTTAAG 2 cut(s) 902, 1190
BspTNI GGTCTC 1 cut(s) 1920
BsrFI RCCGGY 1 cut(s) 1962
BsrGI TGTACA 1 cut(s) 2543
BssAI RCCGGY 1 cut(s) 1962
BssECI CCNNGG 3 cut(s) 1625, 1684, 2619
BssNI GRCGYC 1 cut(s) 1306
BssSI CACGAG 2 cut(s) 2438, 2708
BssT1I CCWWGG 1 cut(s) 2619
Bst2BI CACGAG 2 cut(s) 2438, 2708
Bst2UI CCWGG 4 cut(s) 295, 466, 666, 1626
Bst4CI ACNGT 7 cut(s) 475, 1667, 1685, 1858, 2305, 2329, 2391
Bst6I CTCTTC 2 cut(s) 352, 2476
BstACI GRCGYC 1 cut(s) 1306
BstAFI CTTAAG 2 cut(s) 902, 1190
BstAPI GCANNNNNTGC 1 cut(s) 1898
BstAUI TGTACA 1 cut(s) 2543
BstBI TTCGAA 1 cut(s) 1324
BstC8I GCNNGC 4 cut(s) 675, 1105, 2182, 2573
BstDEI CTNAG 9 cut(s) 366, 618, 867, 894, 1366, 2081, 2519, 2641, 2668
BstDSI CCRYGG 2 cut(s) 1684, 2619
BstENI CCTNNNNNAGG 1 cut(s) 702
BstF5I GGATG 7 cut(s) 175, 196, 323, 835, 1585, 1982, 2047
BstFNI CGCG 1 cut(s) 1827
BstH2I RGCGCY 1 cut(s) 1283
BstHHI GCGC 1 cut(s) 1282
BstMAI GTCTC 5 cut(s) 591, 870, 1920, 2110, 2378
BstMWI GCNNNNNNNGC 5 cut(s) 670, 1022, 1175, 1184, 1898
BstNI CCWGG 4 cut(s) 295, 466, 666, 1626
BstNSI RCATGY 2 cut(s) 44, 2338
BstSCI CCNGG 6 cut(s) 293, 464, 601, 664, 1301, 1624
BstSFI CTRYAG 3 cut(s) 229, 939, 2325
BstSLI GKGCMC 1 cut(s) 461
BstUI CGCG 1 cut(s) 1827
BstV1I GCAGC 8 cut(s) 613, 631, 634, 1904, 1984, 2064, 2169, 2333
BstV2I GAAGAC 4 cut(s) 66, 702, 984, 2317
BstX2I RGATCY 3 cut(s) 269, 935, 2006
BstXI CCANNNNNNTGG 1 cut(s) 301
BstYI RGATCY 3 cut(s) 269, 935, 2006
BsuI GTATCC 1 cut(s) 2585
BsuRI GGCC 5 cut(s) 459, 488, 853, 1103, 1962
BtgI CCRYGG 2 cut(s) 1684, 2619
BtsCI GGATG 7 cut(s) 175, 196, 323, 835, 1585, 1982, 2047
BtsI GCAGTG 2 cut(s) 229, 1992
BtsIMutI CAGTG 8 cut(s) 168, 229, 773, 1707, 1986, 1992, 2295, 2387
BtuMI TCGCGA 1 cut(s) 1827
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 4 cut(s) 675, 1105, 2182, 2573
CaiI CAGNNNCTG 2 cut(s) 1898, 2279
CciI TCATGA 1 cut(s) 415
CfoI GCGC 1 cut(s) 1282
Cfr10I RCCGGY 1 cut(s) 1962
Cfr13I GGNCC 4 cut(s) 457, 458, 487, 668
CseI GACGC 1 cut(s) 1295
Csp6I GTAC 5 cut(s) 834, 898, 2330, 2374, 2544
CspCI CAANNNNNGTGG 2 cut(s) 1939, 1974
CviQI GTAC 5 cut(s) 834, 898, 2330, 2374, 2544
DdeI CTNAG 9 cut(s) 366, 618, 867, 894, 1366, 2081, 2519, 2641, 2668
DraI TTTAAA 1 cut(s) 918
DrdI GACNNNNNNGTC 1 cut(s) 2097
DseDI GACNNNNNNGTC 1 cut(s) 2097
EaeI YGGCCR 1 cut(s) 1960
Eam1104I CTCTTC 2 cut(s) 352, 2476
EarI CTCTTC 2 cut(s) 352, 2476
Ecl136II GAGCTC 4 cut(s) 959, 1187, 2207, 2707
Eco130I CCWWGG 1 cut(s) 2619
Eco147I AGGCCT 1 cut(s) 853
Eco24I GRGCYC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
Eco31I GGTCTC 1 cut(s) 1920
Eco32I GATATC 2 cut(s) 846, 2833
Eco47I GGWCC 1 cut(s) 668
Eco47III AGCGCT 1 cut(s) 1281
Eco53kI GAGCTC 4 cut(s) 959, 1187, 2207, 2707
Eco57I CTGAAG 4 cut(s) 774, 937, 1105, 1572
Eco88I CYCGRG 1 cut(s) 2208
EcoICRI GAGCTC 4 cut(s) 959, 1187, 2207, 2707
EcoNI CCTNNNNNAGG 1 cut(s) 702
EcoO109I RGGNCCY 2 cut(s) 457, 458
EcoRI GAATTC 4 cut(s) 1054, 2402, 2651, 2663
EcoRII CCWGG 4 cut(s) 293, 464, 664, 1624
EcoRV GATATC 2 cut(s) 846, 2833
EcoT14I CCWWGG 1 cut(s) 2619
EcoT38I GRGCYC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
ErhI CCWWGG 1 cut(s) 2619
FalI AAGNNNNNCTT 4 cut(s) 1349, 1381, 2624, 2656
FaqI GGGAC 1 cut(s) 1642
FauNDI CATATG 1 cut(s) 2131
FbaI TGATCA 1 cut(s) 418
Fnu4HI GCNGC 8 cut(s) 627, 645, 648, 1893, 1998, 2053, 2158, 2322
FokI GGATG 7 cut(s) 162, 203, 310, 842, 1592, 1969, 2054
FriOI GRGCYC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
Fsp4HI GCNGC 8 cut(s) 627, 645, 648, 1893, 1998, 2053, 2158, 2322
FspBI CTAG 9 cut(s) 102, 282, 543, 678, 701, 849, 1821, 1902, 2097
GlaI GCGC 1 cut(s) 1281
GluI GCNGC 8 cut(s) 627, 645, 648, 1893, 1998, 2053, 2158, 2322
GsuI CTGGAG 2 cut(s) 840, 1203
HaeII RGCGCY 1 cut(s) 1283
HaeIII GGCC 5 cut(s) 459, 488, 853, 1103, 1962
HapII CCGG 4 cut(s) 179, 603, 1302, 1963
HgaI GACGC 1 cut(s) 1295
HhaI GCGC 1 cut(s) 1282
Hin1I GRCGYC 1 cut(s) 1306
Hin6I GCGC 1 cut(s) 1280
HinP1I GCGC 1 cut(s) 1280
HindIII AAGCTT 1 cut(s) 1072
HpaII CCGG 4 cut(s) 179, 603, 1302, 1963
HphI GGTGA 5 cut(s) 1301, 1673, 1766, 2617, 2635
Hpy166II GTNNAC 4 cut(s) 1876, 2332, 2701, 2713
Hpy8I GTNNAC 4 cut(s) 1876, 2332, 2701, 2713
HpyCH4III ACNGT 7 cut(s) 475, 1667, 1685, 1858, 2305, 2329, 2391
HpyCH4IV ACGT 2 cut(s) 124, 2488
HpyF10VI GCNNNNNNNGC 5 cut(s) 670, 1022, 1175, 1184, 1898
HpyF3I CTNAG 9 cut(s) 366, 618, 867, 894, 1366, 2081, 2519, 2641, 2668
HpySE526I ACGT 2 cut(s) 124, 2488
Hsp92I GRCGYC 1 cut(s) 1306
HspAI GCGC 1 cut(s) 1280
Ksp22I TGATCA 1 cut(s) 418
LmnI GCTCC 5 cut(s) 388, 478, 964, 1125, 1184
Lsp1109I GCAGC 8 cut(s) 613, 631, 634, 1904, 1984, 2064, 2169, 2333
LweI GCATC 6 cut(s) 156, 370, 1382, 1747, 2067, 2558
MaeI CTAG 9 cut(s) 102, 282, 543, 678, 701, 849, 1821, 1902, 2097
MaeII ACGT 2 cut(s) 124, 2488
MflI RGATCY 3 cut(s) 269, 935, 2006
MhlI GDGCHC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
MlyI GAGTC 7 cut(s) 305, 890, 1823, 1871, 1964, 2138, 2485
MmeI TCCRAC 5 cut(s) 288, 1284, 1327, 2451, 2755
MslI CAYNNNNRTG 2 cut(s) 45, 2618
MspA1I CMGCKG 1 cut(s) 61
MspCI CTTAAG 2 cut(s) 902, 1190
MspI CCGG 4 cut(s) 179, 603, 1302, 1963
MspR9I CCNGG 6 cut(s) 295, 466, 603, 666, 1303, 1626
Mva1269I GAATGC 1 cut(s) 2558
MvaI CCWGG 4 cut(s) 295, 466, 666, 1626
MvnI CGCG 1 cut(s) 1827
MwoI GCNNNNNNNGC 5 cut(s) 670, 1022, 1175, 1184, 1898
NciI CCSGG 2 cut(s) 603, 1303
NcoI CCATGG 1 cut(s) 2619
NdeI CATATG 1 cut(s) 2131
NlaIV GGNNCC 4 cut(s) 459, 480, 1127, 2118
NmuCI GTSAC 5 cut(s) 224, 769, 1307, 1490, 1648
NruI TCGCGA 1 cut(s) 1827
NspI RCATGY 2 cut(s) 44, 2338
NspV TTCGAA 1 cut(s) 1324
PaeR7I CTCGAG 1 cut(s) 2208
PagI TCATGA 1 cut(s) 415
PceI AGGCCT 1 cut(s) 853
PciI ACATGT 1 cut(s) 40
PcsI WCGNNNNNNNCGW 3 cut(s) 1429, 2485, 2572
PctI GAATGC 1 cut(s) 2558
PfeI GAWTC 6 cut(s) 172, 812, 1292, 1811, 2066, 2276
PkrI GCNGC 8 cut(s) 628, 646, 649, 1894, 1999, 2054, 2159, 2323
PleI GAGTC 7 cut(s) 305, 889, 1823, 1871, 1964, 2138, 2484
PpsI GAGTC 7 cut(s) 305, 889, 1823, 1871, 1964, 2138, 2484
PscI ACATGT 1 cut(s) 40
PsiI TTATAA 2 cut(s) 840, 2845
Psp124BI GAGCTC 4 cut(s) 961, 1189, 2209, 2709
Psp1406I AACGTT 1 cut(s) 124
Psp6I CCWGG 4 cut(s) 293, 464, 664, 1624
PspGI CCWGG 4 cut(s) 293, 464, 664, 1624
PspN4I GGNNCC 4 cut(s) 459, 480, 1127, 2118
PspOMI GGGCCC 1 cut(s) 457
PspPI GGNCC 4 cut(s) 457, 458, 487, 668
PstNI CAGNNNCTG 2 cut(s) 1898, 2279
PsuI RGATCY 3 cut(s) 269, 935, 2006
PvuII CAGCTG 1 cut(s) 61
RruI TCGCGA 1 cut(s) 1827
RsaI GTAC 5 cut(s) 835, 899, 2331, 2375, 2545
RsaNI GTAC 5 cut(s) 834, 898, 2330, 2374, 2544
RseI CAYNNNNRTG 2 cut(s) 45, 2618
SacI GAGCTC 4 cut(s) 961, 1189, 2209, 2709
SatI GCNGC 8 cut(s) 627, 645, 648, 1893, 1998, 2053, 2158, 2322
Sau96I GGNCC 4 cut(s) 457, 458, 487, 668
SchI GAGTC 7 cut(s) 305, 890, 1823, 1871, 1964, 2138, 2485
ScrFI CCNGG 6 cut(s) 295, 466, 603, 666, 1303, 1626
SduI GDGCHC 6 cut(s) 342, 461, 961, 1189, 2209, 2709
SfaNI GCATC 6 cut(s) 156, 370, 1382, 1747, 2067, 2558
SfcI CTRYAG 3 cut(s) 229, 939, 2325
Sfr274I CTCGAG 1 cut(s) 2208
SfuI TTCGAA 1 cut(s) 1324
SinI GGWCC 1 cut(s) 668
SlaI CTCGAG 1 cut(s) 2208
SmiMI CAYNNNNRTG 2 cut(s) 45, 2618
SmlI CTYRAG 4 cut(s) 740, 902, 1190, 2208
SmoI CTYRAG 4 cut(s) 740, 902, 1190, 2208
SseBI AGGCCT 1 cut(s) 853
SsiI CCGC 3 cut(s) 169, 671, 2292
SspI AATATT 1 cut(s) 1541
SspMI CTAG 9 cut(s) 102, 282, 543, 678, 701, 849, 1821, 1902, 2097
SstI GAGCTC 4 cut(s) 961, 1189, 2209, 2709
StuI AGGCCT 1 cut(s) 853
StyD4I CCNGG 6 cut(s) 293, 464, 601, 664, 1301, 1624
StyI CCWWGG 1 cut(s) 2619
TaaI ACNGT 7 cut(s) 475, 1667, 1685, 1858, 2305, 2329, 2391
TaiI ACGT 2 cut(s) 127, 2491
TatI WGTACW 2 cut(s) 2329, 2543
TfiI GAWTC 6 cut(s) 172, 812, 1292, 1811, 2066, 2276
TscAI CASTG 8 cut(s) 168, 229, 780, 1714, 1993, 1999, 2302, 2394
TseFI GTSAC 5 cut(s) 224, 769, 1307, 1490, 1648
TseI GCWGC 8 cut(s) 626, 644, 647, 1892, 1997, 2052, 2157, 2321
Tsp45I GTSAC 5 cut(s) 224, 769, 1307, 1490, 1648
TspGWI ACGGA 1 cut(s) 951
TspRI CASTG 8 cut(s) 168, 229, 780, 1714, 1993, 1999, 2302, 2394
Vha464I CTTAAG 2 cut(s) 902, 1190
VpaK11BI GGWCC 1 cut(s) 668
XagI CCTNNNNNAGG 1 cut(s) 702
XapI RAATTY 8 cut(s) 1054, 1976, 2402, 2651, 2663, 2750, 2765, 2796
XceI RCATGY 2 cut(s) 44, 2338
XcmI CCANNNNNNNNNTGG 2 cut(s) 472, 2302
XhoI CTCGAG 1 cut(s) 2208
XspI CTAG 9 cut(s) 102, 282, 543, 678, 701, 849, 1821, 1902, 2097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.