Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0004581

Physical Location & Seq

Genomic Coordinates Forward (+)

48118331 .. 48123446

Gene Structure 5116 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00366270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2847 bp

ATGGGAGTTGAAAAAGAAGGTCTGAGAAATGGAGCAGGGCATGTGGGGGGTTTCTTTCAGCTGTTTGACTGGTCTTCAAAATCTCGAAAAAAATTATTTTCGAGCAAGTCAGATTTACCAGAGCATTCAAAACAAGGAAAGAAAGGCTATCGGAACTTTCCAGTGACACGGAATCATCCGGTTGATGAGGATGAAACTGGGGTAACAACGAGTGTCAAAGGTGGCAGTGACTATAGTTGTGCTTCATCAGTTACAGATGAAGAAGGATATGGATCTAAAGCCCCTAGTGTAGTTGCCAGGCTAATGGGTTTGGACTCTTTACCCACATCCAATCTTTCTGAGCCCTACTCTACCCCATTTTTTGACACCCAGTCTTTCCAAGATGCTCCTTACCACAGGAAAAACGTTGATTATTATCATGATCATCAGTTAATGTTTTCTGGAAACCTTCTCATGGAGGGCCCTACTAGGAATCCTGTGGAGCCAAAGCCCCAGAAGGTGCATAGCAGACCAATTGAGAAGTTCCAAACTGAAATGTTGCCTCCTAGATCAGCCAAGTCTATCCCAATTACACACCATAAGCTTTTGTCTCCTATTAAGAATCCTGGCTTTGTTCCCACTAAGACTGCTGCGCACATTATGGAAGCTGCTGCAAGAATGATTGAACCTGGACCGCAAGCTACTGTCAAGACTAAAATGCCTCTAGTAGGGTCTTCTTCTGCGCCTTTGAAGGTTCAGGCTCTCAAGGAAAAGGCAGAGGCTTCCCGGAAGGTGACATTGGTTGGGTCATCTTCAGAAACCTTCAAAGTCCGAGATTTAAAAGAGAAAGTGGAAGGTGCTTATAAGACAGCTAGGCCTCCAGAAGTCTCTCGCAAGCCAGTTGAGTCAAATGCTGCTAAGTACCTTAAGGGTCAGTCTTTGAACAAGAGCTGGAATGGATCTGTAGATATGCCCTTCAGAGCTTCATCTGATACAGAAGAAGATACTTCAAAGAATAAAGGAAAGTCCATTTCTCTTGCAGTACAAGCAAAGGTCAATGTTCAGAAAAGAGGTCAGAATTCAAGTAGAAATAGAAGCTTGGTGGGGCAGAGAGAACAGAATGAGGCCAGCTCAAGCCAGCCCTTCAGGAGCCAACCAAATGTTCAAAAGAACTTGCATAGGAAACCTTCTATTCATAATGCTTCTGGTGCCCTTAAGCAGAATAATCAGAAACAAAATTGTCTAATGGAAAAAGACAAATTACCTTCAAAATCTTTGGCTTCCAACTCGCAGGTCAGAAAAGCGCTTTCTGGGGATTCTTCTTCTGGGCGTCACAAAAGCTATATTCGAAGTAATGGAAACTCCAAAGTTGTATCAAGGAAGTTAGGCTTAGAGGCAACAGATAGTGCAAAAGAAGCTTCCTATTCTAATACAACGAATTACACCCGGAAGAAGCGAACAATAGATGGAAATTTCCATTTTAATAAAGACCGGGTTGTTGATGGTATGTCGAGTGACAAAAATCAGAAGCCAGGTCAATCTAAATTAGTTACTGACAGACAGTATAGTTGGTCTGAAGATTGCAAAAAGAAAGGTGGCATGGATGTCGTTTCGTTTACATTCACTGCCCCTCTTACACGATCATTTCCTGGGACTGAAATCCCGGTTCAGGTCACACCGAAGAATAACAGTATTTGCATGGATCACCGCGGTAAAAGATTGTTGCTTGACACTGATAGTATGAAGCTGTCTTCATTGGGTTACAATGTGATAGGAGGTGATGCTTTGAGTATGCTTCTGGAACAAAAGTTGAAAGAATTGTCTTATGGAACTGAATCTTCTAGTCACGACTCCATGAAAGTAGGATCAAGTTCAACTGCTTCTAATGTGGATGTGGACTCCAATTTTAATGCAGCCAGTGCTGTGAAAAGACTAAAGGAAGAGAGAGACCAACGTCTGTTTGTTTCAGACAAATTGGGTGGCCTGTATGACTCTGAATTGTCATCCACTGATCGTGCTGCTTTCAGATCTAAGCAGAAGTTTCAGGGAGTTGATAAGGTGGACGAGTATAGCATCAATCATATTGAATCTGGAAAGACGCTTAGTTGCCGACATCCTAGTCCAGTCTCAATTTTGGAACCCACTTTTTCAAATGAAAGTTACGACTCTTCAGTTAGCAGTGATAGTAATAGCACAGAAGCAAGCAAGTTATGTTCTTCGATTCGAGCTCAAGAAGTCGATGGTTTATGTTCTTCAAAGAAGTTCCACTCTGTAGAAGCTGATACCGAGTTATCAGATTCTGCTTCTTCCACCTCCACTGGAACTGTGGCAAGAAACCATGCAGCTACAGTATACATGCCGAATCCTTGGAGATCAGATGAATGGGAATTGGGTTACATAAAGGAGACACTGTGTAATGTGGAATTCATGTTTCAAGACTTGGCATTGGGTCGATCCCAGGAGATCATAAACCCTCATCTGTTCAATCTGTTGGAGAGTCAAAGAGGACGGTTTGAAAAAGATGGCAGCAAGTCCAGGCTAAGGCGAAAGGAATTATTTGATTGTACAAGTGAACGCTTGGACTTTCGATGCAGGCGTTATGTGGGTGGGGGATACAAAGCATGGGTTAAAGGCACAGCAATGGTGAGAAGAAAGGACATCTTAGCAGAAGAATTCGACAAAGAATTCTCAGCTTTGACTAGCATGGGGGATTGTATGGTGGATGAGCTCGTGGCCAAGGACATGACCAGCCAGTATGGAAGATGGCTCGAATTTGAAACTGATGAATTTTCACTCGGAGTTGAGATCGAGGGTCAAATATTTAATTCTTTGGTTGATGAAGTGGTTGCTGATATCCTGAAATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

948

Amino Acids

105.12

Weight (kDa)

9.1

Isoelectric Point (pI)

45.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	82 - 111	3.1e-16	DUF761-associated sequence motif
DUF4378	PF14309	790 - 940	5e-29	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004581)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05750 AT3G05750 AT3G05750 AT3G05750 AT3G58650 AT5G26910 AT5G26910 AT5G26910 AT5G26910
fragaria_vesca	FvH4_4g19300 FvH4_4g19300 FvH4_4g19300
malus_domestica	MD13G1158100.v1.1 MD16G1158900.v1.1
prunus_persica	Prupe.1G125400_v2.0.a1 Prupe.1G125400_v2.0.a1 Prupe.1G125400_v2.0.a1
pyrus_communis	pycom13g13520 pycom16g13380
rosa_chinensis	RchiOBHm_Chr4g0424321
rosa_laevigata	RLG00000007486
rosa_multiflora	Rmu_sc0002260.1_g000005
rosa_roxburghii	Rroxscaffold_5G00366270
rosa_rugosa	Rorug04G0195900 Rorug04G0195900
rosa_samantha	Rh4AG252700 Rh4BG258100 Rh4CG269000 Rh4DG252400 Rh4DG252500
rosa_wichuraiana	Rw4G021790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	843, 2845
AasI	GACNNNNNNGTC	1 cut(s)	2097
Acc16I	TGCGCA	1 cut(s)	633
Acc36I	ACCTGC	1 cut(s)	1261
AccB1I	GGYRCC	1 cut(s)	1187
AccI	GTMKAC	1 cut(s)	2331
AccII	CGCG	1 cut(s)	1689
AciI	CCGC	3 cut(s)	674, 1687, 1689
AclI	AACGTT	1 cut(s)	405
AclWI	GGATC	5 cut(s)	280, 946, 1689, 1852, 2427
AcoI	YGGCCR	1 cut(s)	2712
AcsI	RAATTY	7 cut(s)	1057, 1450, 2402, 2651, 2663, 2750, 2765
AcuI	CTGAAG	5 cut(s)	777, 940, 1108, 1575, 2133
AcyI	GRCGYC	1 cut(s)	1309
AfaI	GTAC	3 cut(s)	902, 1023, 2545
AfeI	AGCGCT	1 cut(s)	1284
AfiI	CCNNNNNNNGG	4 cut(s)	454, 707, 1648, 2520
AflII	CTTAAG	2 cut(s)	905, 1193
AhdI	GACNNNNNGTC	1 cut(s)	370
AjnI	CCWGG	7 cut(s)	296, 604, 667, 1510, 1627, 2436, 2513
AjuI	GAANNNNNNNTTGG	4 cut(s)	761, 793, 1125, 1157
Alw21I	GWGCWC	2 cut(s)	2209, 2709
Alw26I	GTCTC	5 cut(s)	594, 871, 1920, 2110, 2378
AlwI	GGATC	5 cut(s)	280, 946, 1689, 1852, 2427
AlwNI	CAGNNNCTG	1 cut(s)	2279
Aor51HI	AGCGCT	1 cut(s)	1284
AoxI	GGCC	5 cut(s)	460, 854, 1104, 1960, 2712
ApaI	GGGCCC	1 cut(s)	464
ApeKI	GCWGC	8 cut(s)	629, 647, 650, 893, 1892, 1997, 2321, 2505
ApoI	RAATTY	7 cut(s)	1057, 1450, 2402, 2651, 2663, 2750, 2765
AspLEI	GCGC	3 cut(s)	634, 724, 1285
AspS9I	GGNCC	3 cut(s)	460, 461, 671
AsuC2I	CCSGG	4 cut(s)	766, 1426, 1472, 1643
AsuHPI	GGTGA	4 cut(s)	784, 1676, 1769, 2635
AsuII	TTCGAA	1 cut(s)	1327
AvaII	GGWCC	1 cut(s)	671
BaeGI	GKGCMC	2 cut(s)	464, 1192
BalI	TGGCCA	1 cut(s)	2714
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	4 cut(s)	345, 464, 2209, 2709
BauI	CACGAG	1 cut(s)	2708
BbsI	GAAGAC	3 cut(s)	66, 705, 1722
Bbv12I	GWGCWC	2 cut(s)	2209, 2709
BbvI	GCAGC	8 cut(s)	616, 634, 637, 880, 1904, 1984, 2333, 2517
BccI	CCATC	5 cut(s)	1439, 1475, 2213, 2495, 2736
BcgI	CGANNNNNNTGC	2 cut(s)	1567, 1601
BciT130I	CCWGG	7 cut(s)	298, 606, 669, 1512, 1629, 2438, 2515
BciVI	GTATCC	1 cut(s)	2585
BclI	TGATCA	1 cut(s)	421
BcnI	CCSGG	4 cut(s)	766, 1426, 1472, 1643
BcoDI	GTCTC	5 cut(s)	594, 871, 1920, 2110, 2378
BfaI	CTAG	8 cut(s)	285, 468, 546, 704, 852, 1821, 2097, 2679
BfmI	CTRYAG	4 cut(s)	232, 942, 2250, 2325
BfoI	RGCGCY	1 cut(s)	1286
BfrI	CTTAAG	2 cut(s)	905, 1193
BfuAI	ACCTGC	1 cut(s)	1261
BfuI	GTATCC	1 cut(s)	2585
BglII	AGATCT	1 cut(s)	2006
BisI	GCNGC	8 cut(s)	630, 648, 651, 894, 1893, 1998, 2322, 2506
BlsI	GCNGC	8 cut(s)	631, 649, 652, 895, 1894, 1999, 2323, 2507
Bme18I	GGWCC	1 cut(s)	671
BmeRI	GACNNNNNGTC	1 cut(s)	370
BmgT120I	GGNCC	3 cut(s)	460, 461, 671
BmiI	GGNNCC	5 cut(s)	462, 483, 1130, 1189, 2118
BmrI	ACTGGG	2 cut(s)	207, 364
BmsI	GCATC	4 cut(s)	373, 1750, 2061, 2558
BmuI	ACTGGG	2 cut(s)	207, 364
BoxI	GACNNNNGTC	1 cut(s)	1932
BpiI	GAAGAC	3 cut(s)	66, 705, 1722
BplI	GAGNNNNNCTC	4 cut(s)	332, 364, 1094, 1126
BpmI	CTGGAG	1 cut(s)	843
Bpu10I	CCTNAGC	1 cut(s)	2519
Bpu14I	TTCGAA	1 cut(s)	1327
BpuEI	CTTGAG	3 cut(s)	728, 1096, 2193
BpuMI	CCSGG	4 cut(s)	766, 1426, 1472, 1643
BsaBI	GATNNNNATC	2 cut(s)	271, 414
BsaHI	GRCGYC	1 cut(s)	1309
BsaI	GGTCTC	1 cut(s)	1920
BsaJI	CCNNGG	5 cut(s)	1628, 1687, 2345, 2436, 2715
BsaWI	WCCGGW	1 cut(s)	178
BsaXI	ACNNNNNCTCC	2 cut(s)	2375, 2405
Bsc4I	CCNNNNNNNGG	4 cut(s)	454, 707, 1648, 2520
Bse1I	ACTGG	9 cut(s)	74, 161, 202, 370, 878, 1896, 2102, 2302, 2731
Bse3DI	GCAATG	1 cut(s)	2625
Bse8I	GATNNNNATC	2 cut(s)	271, 414
BseBI	CCWGG	7 cut(s)	298, 606, 669, 1512, 1629, 2438, 2515
BseDI	CCNNGG	5 cut(s)	1628, 1687, 2345, 2436, 2715
BseGI	GGATG	8 cut(s)	175, 196, 326, 1588, 1876, 1982, 2092, 2707
BseJI	GATNNNNATC	2 cut(s)	271, 414
BseLI	CCNNNNNNNGG	4 cut(s)	454, 707, 1648, 2520
BseMI	GCAATG	1 cut(s)	2625
BseMII	CTCAG	3 cut(s)	14, 330, 2682
BseNI	ACTGG	9 cut(s)	74, 161, 202, 370, 878, 1896, 2102, 2302, 2731
BseSI	GKGCMC	2 cut(s)	464, 1192
BseXI	GCAGC	8 cut(s)	616, 634, 637, 880, 1904, 1984, 2333, 2517
Bsh1236I	CGCG	1 cut(s)	1689
BshFI	GGCC	5 cut(s)	462, 856, 1106, 1962, 2714
BshNI	GGYRCC	1 cut(s)	1187
BsiHKAI	GWGCWC	2 cut(s)	2209, 2709
BsiSI	CCGG	5 cut(s)	179, 766, 1426, 1471, 1643
BslFI	GGGAC	1 cut(s)	1645
BslI	CCNNNNNNNGG	4 cut(s)	454, 707, 1648, 2520
BsmAI	GTCTC	5 cut(s)	594, 871, 1920, 2110, 2378
BsmFI	GGGAC	1 cut(s)	1645
BsmI	GAATGC	1 cut(s)	124
BsnI	GGCC	5 cut(s)	462, 856, 1106, 1962, 2714
Bso31I	GGTCTC	1 cut(s)	1920
Bsp119I	TTCGAA	1 cut(s)	1327
Bsp120I	GGGCCC	1 cut(s)	460
Bsp1286I	GDGCHC	5 cut(s)	345, 464, 1192, 2209, 2709
Bsp1407I	TGTACA	1 cut(s)	2543
BspACI	CCGC	3 cut(s)	674, 1687, 1689
BspANI	GGCC	5 cut(s)	462, 856, 1106, 1962, 2714
BspCNI	CTCAG	3 cut(s)	15, 331, 2681
BspFNI	CGCG	1 cut(s)	1689
BspHI	TCATGA	1 cut(s)	418
BspLI	GGNNCC	5 cut(s)	462, 483, 1130, 1189, 2118
BspMI	ACCTGC	1 cut(s)	1261
BspPI	GGATC	5 cut(s)	280, 946, 1689, 1852, 2427
BspT104I	TTCGAA	1 cut(s)	1327
BspT107I	GGYRCC	1 cut(s)	1187
BspTI	CTTAAG	2 cut(s)	905, 1193
BspTNI	GGTCTC	1 cut(s)	1920
BsrDI	GCAATG	1 cut(s)	2625
BsrGI	TGTACA	1 cut(s)	2543
BsrI	ACTGG	9 cut(s)	74, 161, 202, 370, 878, 1896, 2102, 2302, 2731
BssECI	CCNNGG	5 cut(s)	1628, 1687, 2345, 2436, 2715
BssNAI	GTATAC	1 cut(s)	2332
BssNI	GRCGYC	1 cut(s)	1309
BssSI	CACGAG	1 cut(s)	2708
BssT1I	CCWWGG	2 cut(s)	2345, 2715
Bst1107I	GTATAC	1 cut(s)	2332
Bst2BI	CACGAG	1 cut(s)	2708
Bst2UI	CCWGG	7 cut(s)	298, 606, 669, 1512, 1629, 2438, 2515
Bst4CI	ACNGT	7 cut(s)	685, 1542, 1670, 2305, 2329, 2391, 2490
Bst6I	CTCTTC	2 cut(s)	1914, 2152
BstACI	GRCGYC	1 cut(s)	1309
BstAFI	CTTAAG	2 cut(s)	905, 1193
BstAPI	GCANNNNNTGC	1 cut(s)	1898
BstAUI	TGTACA	1 cut(s)	2543
BstBI	TTCGAA	1 cut(s)	1327
BstC8I	GCNNGC	6 cut(s)	678, 875, 1108, 1118, 2182, 2573
BstDSI	CCRYGG	1 cut(s)	1687
BstENI	CCTNNNNNAGG	1 cut(s)	705
BstF5I	GGATG	8 cut(s)	175, 196, 326, 1588, 1876, 1982, 2092, 2707
BstFNI	CGCG	1 cut(s)	1689
BstH2I	RGCGCY	1 cut(s)	1286
BstHHI	GCGC	3 cut(s)	634, 724, 1285
BstMAI	GTCTC	5 cut(s)	594, 871, 1920, 2110, 2378
BstMWI	GCNNNNNNNGC	4 cut(s)	1025, 1187, 1394, 1898
BstNI	CCWGG	7 cut(s)	298, 606, 669, 1512, 1629, 2438, 2515
BstNSI	RCATGY	2 cut(s)	44, 2338
BstPAI	GACNNNNGTC	1 cut(s)	1932
BstSFI	CTRYAG	4 cut(s)	232, 942, 2250, 2325
BstSLI	GKGCMC	2 cut(s)	464, 1192
BstUI	CGCG	1 cut(s)	1689
BstV1I	GCAGC	8 cut(s)	616, 634, 637, 880, 1904, 1984, 2333, 2517
BstV2I	GAAGAC	3 cut(s)	66, 705, 1722
BstX2I	RGATCY	3 cut(s)	272, 938, 2006
BstXI	CCANNNNNNTGG	1 cut(s)	304
BstYI	RGATCY	3 cut(s)	272, 938, 2006
BstZ17I	GTATAC	1 cut(s)	2332
BsuI	GTATCC	1 cut(s)	2585
BsuRI	GGCC	5 cut(s)	462, 856, 1106, 1962, 2714
BtgI	CCRYGG	1 cut(s)	1687
BtsCI	GGATG	8 cut(s)	175, 196, 326, 1588, 1876, 1982, 2092, 2707
BtsI	GCAGTG	3 cut(s)	232, 1602, 2164
BtsIMutI	CAGTG	9 cut(s)	168, 232, 1602, 1710, 1903, 1986, 2164, 2295, 2387
BveI	ACCTGC	1 cut(s)	1261
Cac8I	GCNNGC	6 cut(s)	678, 875, 1108, 1118, 2182, 2573
CaiI	CAGNNNCTG	1 cut(s)	2279
CciI	TCATGA	1 cut(s)	418
CfoI	GCGC	3 cut(s)	634, 724, 1285
Cfr13I	GGNCC	3 cut(s)	460, 461, 671
Cfr42I	CCGCGG	1 cut(s)	1690
CseI	GACGC	2 cut(s)	1298, 2086
Csp6I	GTAC	3 cut(s)	901, 1022, 2544
CspCI	CAANNNNNGTGG	2 cut(s)	1939, 1974
CviQI	GTAC	3 cut(s)	901, 1022, 2544
DraI	TTTAAA	1 cut(s)	819
DrdI	GACNNNNNNGTC	1 cut(s)	2097
DriI	GACNNNNNGTC	1 cut(s)	370
DseDI	GACNNNNNNGTC	1 cut(s)	2097
EaeI	YGGCCR	1 cut(s)	2712
Eam1104I	CTCTTC	2 cut(s)	1914, 2152
Eam1105I	GACNNNNNGTC	1 cut(s)	370
EarI	CTCTTC	2 cut(s)	1914, 2152
Ecl136II	GAGCTC	2 cut(s)	2207, 2707
Eco130I	CCWWGG	2 cut(s)	2345, 2715
Eco147I	AGGCCT	1 cut(s)	856
Eco24I	GRGCYC	4 cut(s)	345, 464, 2209, 2709
Eco31I	GGTCTC	1 cut(s)	1920
Eco32I	GATATC	1 cut(s)	2833
Eco47I	GGWCC	1 cut(s)	671
Eco47III	AGCGCT	1 cut(s)	1284
Eco53kI	GAGCTC	2 cut(s)	2207, 2707
Eco57I	CTGAAG	5 cut(s)	777, 940, 1108, 1575, 2133
EcoICRI	GAGCTC	2 cut(s)	2207, 2707
EcoNI	CCTNNNNNAGG	1 cut(s)	705
EcoO109I	RGGNCCY	2 cut(s)	460, 461
EcoRI	GAATTC	4 cut(s)	1057, 2402, 2651, 2663
EcoRII	CCWGG	7 cut(s)	296, 604, 667, 1510, 1627, 2436, 2513
EcoRV	GATATC	1 cut(s)	2833
EcoT14I	CCWWGG	2 cut(s)	2345, 2715
EcoT38I	GRGCYC	4 cut(s)	345, 464, 2209, 2709
ErhI	CCWWGG	2 cut(s)	2345, 2715
FalI	AAGNNNNNCTT	4 cut(s)	1352, 1384, 2624, 2656
FaqI	GGGAC	1 cut(s)	1645
FbaI	TGATCA	1 cut(s)	421
FblI	GTMKAC	1 cut(s)	2331
Fnu4HI	GCNGC	8 cut(s)	630, 648, 651, 894, 1893, 1998, 2322, 2506
FokI	GGATG	8 cut(s)	162, 203, 313, 1595, 1883, 1969, 2079, 2714
FriOI	GRGCYC	4 cut(s)	345, 464, 2209, 2709
Fsp4HI	GCNGC	8 cut(s)	630, 648, 651, 894, 1893, 1998, 2322, 2506
FspBI	CTAG	8 cut(s)	285, 468, 546, 704, 852, 1821, 2097, 2679
FspI	TGCGCA	1 cut(s)	633
GlaI	GCGC	3 cut(s)	633, 723, 1284
GluI	GCNGC	8 cut(s)	630, 648, 651, 894, 1893, 1998, 2322, 2506
GsuI	CTGGAG	1 cut(s)	843
HaeII	RGCGCY	1 cut(s)	1286
HaeIII	GGCC	5 cut(s)	462, 856, 1106, 1962, 2714
HapII	CCGG	5 cut(s)	179, 766, 1426, 1471, 1643
HgaI	GACGC	2 cut(s)	1298, 2086
HhaI	GCGC	3 cut(s)	634, 724, 1285
Hin1I	GRCGYC	1 cut(s)	1309
Hin6I	GCGC	3 cut(s)	632, 722, 1283
HinP1I	GCGC	3 cut(s)	632, 722, 1283
HindIII	AAGCTT	3 cut(s)	581, 1075, 1395
HpaII	CCGG	5 cut(s)	179, 766, 1426, 1471, 1643
HphI	GGTGA	4 cut(s)	784, 1676, 1769, 2635
Hpy166II	GTNNAC	5 cut(s)	1596, 1876, 2041, 2332, 2552
Hpy8I	GTNNAC	5 cut(s)	1596, 1876, 2041, 2332, 2552
HpyCH4III	ACNGT	7 cut(s)	685, 1542, 1670, 2305, 2329, 2391, 2490
HpyCH4IV	ACGT	2 cut(s)	405, 1933
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1025, 1187, 1394, 1898
HpySE526I	ACGT	2 cut(s)	405, 1933
Hsp92I	GRCGYC	1 cut(s)	1309
HspAI	GCGC	3 cut(s)	632, 722, 1283
Ksp22I	TGATCA	1 cut(s)	421
KspI	CCGCGG	1 cut(s)	1690
LmnI	GCTCC	4 cut(s)	32, 391, 481, 1128
Lsp1109I	GCAGC	8 cut(s)	616, 634, 637, 880, 1904, 1984, 2333, 2517
LweI	GCATC	4 cut(s)	373, 1750, 2061, 2558
MaeI	CTAG	8 cut(s)	285, 468, 546, 704, 852, 1821, 2097, 2679
MaeII	ACGT	2 cut(s)	405, 1933
MfeI	CAATTG	1 cut(s)	513
MflI	RGATCY	3 cut(s)	272, 938, 2006
MhlI	GDGCHC	5 cut(s)	345, 464, 1192, 2209, 2709
MlsI	TGGCCA	1 cut(s)	2714
MluNI	TGGCCA	1 cut(s)	2714
MlyI	GAGTC	7 cut(s)	308, 893, 1823, 1871, 1964, 2138, 2485
MmeI	TCCRAC	2 cut(s)	1287, 2451
Mox20I	TGGCCA	1 cut(s)	2714
MscI	TGGCCA	1 cut(s)	2714
MseI	TTAA	9 cut(s)	431, 597, 818, 906, 1194, 1461, 1887, 2607, 2802
MslI	CAYNNNNRTG	1 cut(s)	2618
Msp20I	TGGCCA	1 cut(s)	2714
MspA1I	CMGCKG	2 cut(s)	61, 1689
MspCI	CTTAAG	2 cut(s)	905, 1193
MspI	CCGG	5 cut(s)	179, 766, 1426, 1471, 1643
MunI	CAATTG	1 cut(s)	513
Mva1269I	GAATGC	1 cut(s)	124
MvaI	CCWGG	7 cut(s)	298, 606, 669, 1512, 1629, 2438, 2515
MvnI	CGCG	1 cut(s)	1689
MwoI	GCNNNNNNNGC	4 cut(s)	1025, 1187, 1394, 1898
NciI	CCSGG	4 cut(s)	766, 1426, 1472, 1643
NlaIV	GGNNCC	5 cut(s)	462, 483, 1130, 1189, 2118
NmuCI	GTSAC	7 cut(s)	163, 227, 772, 1310, 1493, 1651, 1823
NsbI	TGCGCA	1 cut(s)	633
NspI	RCATGY	2 cut(s)	44, 2338
NspV	TTCGAA	1 cut(s)	1327
PagI	TCATGA	1 cut(s)	418
PceI	AGGCCT	1 cut(s)	856
PcsI	WCGNNNNNNNCGW	1 cut(s)	2572
PctI	GAATGC	1 cut(s)	124
PfeI	GAWTC	9 cut(s)	172, 472, 601, 1295, 1814, 2066, 2200, 2276, 2341
PfoI	TCCNGGA	1 cut(s)	764
PkrI	GCNGC	8 cut(s)	631, 649, 652, 895, 1894, 1999, 2323, 2507
PleI	GAGTC	7 cut(s)	308, 892, 1823, 1871, 1964, 2138, 2484
PpsI	GAGTC	7 cut(s)	308, 892, 1823, 1871, 1964, 2138, 2484
PshAI	GACNNNNGTC	1 cut(s)	1932
PsiI	TTATAA	2 cut(s)	843, 2845
Psp124BI	GAGCTC	2 cut(s)	2209, 2709
Psp1406I	AACGTT	1 cut(s)	405
Psp6I	CCWGG	7 cut(s)	296, 604, 667, 1510, 1627, 2436, 2513
PspGI	CCWGG	7 cut(s)	296, 604, 667, 1510, 1627, 2436, 2513
PspN4I	GGNNCC	5 cut(s)	462, 483, 1130, 1189, 2118
PspOMI	GGGCCC	1 cut(s)	460
PspPI	GGNCC	3 cut(s)	460, 461, 671
PstNI	CAGNNNCTG	1 cut(s)	2279
PsuI	RGATCY	3 cut(s)	272, 938, 2006
PvuII	CAGCTG	1 cut(s)	61
RsaI	GTAC	3 cut(s)	902, 1023, 2545
RsaNI	GTAC	3 cut(s)	901, 1022, 2544
RseI	CAYNNNNRTG	1 cut(s)	2618
SacI	GAGCTC	2 cut(s)	2209, 2709
SacII	CCGCGG	1 cut(s)	1690
SaqAI	TTAA	9 cut(s)	431, 597, 818, 906, 1194, 1461, 1887, 2607, 2802
SatI	GCNGC	8 cut(s)	630, 648, 651, 894, 1893, 1998, 2322, 2506
Sau96I	GGNCC	3 cut(s)	460, 461, 671
SchI	GAGTC	7 cut(s)	308, 893, 1823, 1871, 1964, 2138, 2485
SduI	GDGCHC	5 cut(s)	345, 464, 1192, 2209, 2709
SfaNI	GCATC	4 cut(s)	373, 1750, 2061, 2558
SfcI	CTRYAG	4 cut(s)	232, 942, 2250, 2325
Sfr303I	CCGCGG	1 cut(s)	1690
SfuI	TTCGAA	1 cut(s)	1327
SgrBI	CCGCGG	1 cut(s)	1690
SinI	GGWCC	1 cut(s)	671
SmiMI	CAYNNNNRTG	1 cut(s)	2618
SmlI	CTYRAG	5 cut(s)	743, 905, 1111, 1193, 2208
SmoI	CTYRAG	5 cut(s)	743, 905, 1111, 1193, 2208
SseBI	AGGCCT	1 cut(s)	856
SsiI	CCGC	3 cut(s)	674, 1687, 1689
SspI	AATATT	1 cut(s)	2799
SspMI	CTAG	8 cut(s)	285, 468, 546, 704, 852, 1821, 2097, 2679
SstI	GAGCTC	2 cut(s)	2209, 2709
StuI	AGGCCT	1 cut(s)	856
StyI	CCWWGG	2 cut(s)	2345, 2715
TaaI	ACNGT	7 cut(s)	685, 1542, 1670, 2305, 2329, 2391, 2490
TaiI	ACGT	2 cut(s)	408, 1936
TatI	WGTACW	2 cut(s)	1021, 2543
TfiI	GAWTC	9 cut(s)	172, 472, 601, 1295, 1814, 2066, 2200, 2276, 2341
Tru1I	TTAA	9 cut(s)	431, 597, 818, 906, 1194, 1461, 1887, 2607, 2802
Tru9I	TTAA	9 cut(s)	431, 597, 818, 906, 1194, 1461, 1887, 2607, 2802
TscAI	CASTG	9 cut(s)	168, 232, 1609, 1717, 1903, 1993, 2164, 2302, 2394
TseFI	GTSAC	7 cut(s)	163, 227, 772, 1310, 1493, 1651, 1823
TseI	GCWGC	8 cut(s)	629, 647, 650, 893, 1892, 1997, 2321, 2505
Tsp45I	GTSAC	7 cut(s)	163, 227, 772, 1310, 1493, 1651, 1823
TspGWI	ACGGA	1 cut(s)	184
TspRI	CASTG	9 cut(s)	168, 232, 1609, 1717, 1903, 1993, 2164, 2302, 2394
Vha464I	CTTAAG	2 cut(s)	905, 1193
VpaK11BI	GGWCC	1 cut(s)	671
XagI	CCTNNNNNAGG	1 cut(s)	705
XapI	RAATTY	7 cut(s)	1057, 1450, 2402, 2651, 2663, 2750, 2765
XceI	RCATGY	2 cut(s)	44, 2338
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2302
XmiI	GTMKAC	1 cut(s)	2331
XspI	CTAG	8 cut(s)	285, 468, 546, 704, 852, 1821, 2097, 2679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.