Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004581

Physical Location & Seq

Genomic Coordinates Reverse (-)

12355477 .. 12359997

Gene Structure 4521 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1158100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

ATGGGAGTTGAGAGAGAAGGTTCGAAAAGCAGAGCAGGTCATGTGGGCGGTTTCTTTCAGCTGTTTGACTGGAATGCAAAATCTCGAAAAACATTGTTCTCTGGCAATTCAGATTCACCAGAACGCTCAAAAGGAGGAAAGAAAAGCCAGGGGAACTCGCCAGTGACGCAACAGCATCTGGTGGTCGATGAGGATGAAACTAGGGTAGTTTCAAGTGTCAGACGTAGCAGCGATTATAGTTGTGCTTCATCAGTTACAGATGAAGAAGGATTTGGAGCGAAAGCCCCTAGTGTAGTAGCCAGGCTTATGGGATTAGACACCTTACCCACATCCAGTTTTTCTGAGCCATACTCTACCCCATATTTTGACAGTCAATCTCTCCAAGATGCTCATCACCACAGGAGAAACATTGAGTGCTCTCATGACAATCAGTTACAGTATTCTGGAAGTCTCATAAAAAGTAAGGAGCACCCTACCAGGAATTCTTTGAAGTCAAATCCCCAGAAGATGCAAAACAGGCCAATTGAGAGGTTTCAGACTGAAACATTGCCGCCTAGATCATCTAAGTCTATACCGATCACACACCATAAACTTTTGTCTCCCATTAAGAACCCCGGCTTTATTTCCACTAGGAATGCTGCTCACATAATGGAAGCTGCTGCAAAAATTATTGAGCCTGGACCTCCATCTACCGCCAAGGCCAAAATGCCTTTAGTAGGGGCCTCTTCAGAGCCCTTGAAGGTTCAGGCTCTCAAAGAAAAGATGGAGGCATCCCGAAAAGTTCCACTGGTTGGGTTTTCTTCAGAAACCTTGAAAGATCGAGATTTAAAAGATAAAGTTGAAGCTGCTTACAAGAAAACGAGGCCTTTTGAAGTGTCCCAAAAGCCTGTTGAGTCAAATGCTGCTAAGTCTCTTAAGGGACAGTCTTTGAATAAGAGCTGGAATGGATGTCTTGACTTATCATTCATGTCTTCTTCAGAGACAGAAGAAAGTAAGGGGAAGTCCATTTCTCTTGCAATCCAAGCAAAGGTCAATGTTCAGAAAAGAGGTCAGAATTTAAGTAAAAATAGAAGCTCGATAGGTCAGAGAGAACAGAATGAGGTCATCTCAAACCAGCCTTTCCGGAGCCAACCAAATGTTCAAAAGAATTTGCATAAGAAACCGTCTACACATAATGCTTCAGGTGCTCTTAAGCAGAATAATCAGAAACAAAATGGCATAGTTGATAAAGAGAAATTACCTTCAAAGCCTTTGGTTTCCAACTCGCAGGGTAGAAAAGTGCTGTCTGGGGATTCTTCTTCTGGTCGTCACAAAAGCTCAGTTCGCAGTAGTGGAAATTCCAAAATTGGATCCAGGAAGTTGGGCTCAGAGGCAATGGATAGTGAAAAAGAAGTGTCCTACTCAAACGAAAGGAATTATCCTAGGAAGAAACGCTCAATAGATGGAAACTTTCAATTTAATAAAGATCATGCTGTTGATGATATGTTGAGTGACAAAAATCAGAAGTCAGTCCAGTTGAATCCAGTTATTGACTGGCACTATAGTTGGGCTGAAGATAGCAGAAAGAAAGGCATGGATGTTGTTTCTTTTACATTCACAGCCCCACTTACACGATCACTGACTGGGACTGACATCTCAGCTCTGGTTGCGCAGAAGAGCAACAGTCTTTGCACAGATCACCGAGGTAAACGGTTGTTGCTTGACACAGACAGTATGAGGCCATCTTCAGTGGGTTACAATGTGGTAGCCGGTGATGCTTTGAGTGCACTTTTGGAACAAAAATTAAGGGAATTATCTTATGGGAGTGAATCTTCTAGTCATGAATCCGCAAAAGTACACTCAGCTTCAATTGCTTCAAATTTGGATGTGAAACCCAATTTTAATTCAGTTAGCTCCAAGCAAAGGTTAAATAAGCGGAGCGATCAACATCTGATTACAGAGAAACTGGGTGACCAATACGAAGCTGGCACTCCTCCTGCATTCAGATTGAAACAGAAGTTTCAGGGAGTCGATAAGGCAGACGAATATAGCAGCAGTCCTATTGAAGCTGGACAGATGCAGAGTTTGCGGCATCCTAGTCCAGTCTCTGTTCTGGAACCTTCTTTTTCAACTGATAGTGTTGATTCTTCGATTAGCACTGATAGTAACAGTACAGAAGTAAGCAGGTTGTGTTCATCCATTCAAGCTGAAGAAGTTAATGTTGTAAGTTCTTCCAAGAAGTTTCATTCCGTTGAAGCTGACACCGAGTTATCGGATTCCGCTTCTTCAACATCTATAGGAACTGTGGCAAGAAACCATACAGCTACGGTTCACATAAAAGAATCTTTGAGATCAAATGTGTGGGAATTGGAATATTTAAAGGAGACACTATGTAATGTGGAATTGATGTTTAAAGACTTCTCATTGGGCCGGGCTAGGGAGATTATAAACCCTCATCTCTTCAATCTGCTGGAGTGTCGAAGAGGACAGTTTGAAATTGATGGCGGCGAGTCCAGGCTAAGGCGAAAGGAACTATTTGATTGTACAAATGAATGGTTGGATTTGAGATGTAGCCGTTATGTGGGCGGGGGATACAGTTCATGGGTGAAAGGAGTAGCAGTGGTGAGGAGAAAGGCGTCTTTAGCTGAAGAAGTGTACAAGGAACTCTCGGGTTGGAGAGGCATGTGGGATTGCATGGTCGATGAGCTCGTGGTCAAGGACATGAGCAGCCCCTACGGCAGATGGCTGGACTTCGAAACCGATGTATTTGCAGTAGGAGTAGAGGTTGAGGGTCAAATATTTGATTCTTTGGTAGATGAAGTGGTTGCTGATATCTTGCAATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

942

Amino Acids

104.19

Weight (kDa)

8.98

Isoelectric Point (pI)

53.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	83 - 114	4.8e-14	DUF761-associated sequence motif
DUF4378	PF14309	782 - 933	5.2e-33	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004581)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05750 AT3G05750 AT3G05750 AT3G05750 AT3G58650 AT5G26910 AT5G26910 AT5G26910 AT5G26910
fragaria_vesca	FvH4_4g19300 FvH4_4g19300 FvH4_4g19300
malus_domestica	MD13G1158100.v1.1 MD16G1158900.v1.1
prunus_persica	Prupe.1G125400_v2.0.a1 Prupe.1G125400_v2.0.a1 Prupe.1G125400_v2.0.a1
pyrus_communis	pycom13g13520 pycom16g13380
rosa_chinensis	RchiOBHm_Chr4g0424321
rosa_laevigata	RLG00000007486
rosa_multiflora	Rmu_sc0002260.1_g000005
rosa_roxburghii	Rroxscaffold_5G00366270
rosa_rugosa	Rorug04G0195900 Rorug04G0195900
rosa_samantha	Rh4AG252700 Rh4BG258100 Rh4CG269000 Rh4DG252400 Rh4DG252500
rosa_wichuraiana	Rw4G021790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2426
Acc16I	TGCGCA	1 cut(s)	1650
Acc36I	ACCTGC	2 cut(s)	26, 2154
AccB7I	CCANNNNNTGG	1 cut(s)	791
AccI	GTMKAC	1 cut(s)	1166
AccIII	TCCGGA	1 cut(s)	1122
AciI	CCGC	9 cut(s)	48, 551, 693, 1827, 1915, 2068, 2259, 2484, 2565
AclWI	GGATC	2 cut(s)	1344, 1357
AcsI	RAATTY	5 cut(s)	481, 1054, 1147, 1336, 1858
AcuI	CTGAAG	8 cut(s)	711, 786, 960, 1164, 1572, 1710, 2208, 2646
AcyI	GRCGYC	1 cut(s)	2615
AfaI	GTAC	4 cut(s)	1836, 2152, 2524, 2636
AfiI	CCNNNNNNNGG	7 cut(s)	716, 791, 1027, 1902, 2416, 2499, 2560
AflII	CTTAAG	2 cut(s)	914, 1190
AjnI	CCWGG	6 cut(s)	147, 299, 476, 676, 1352, 2492
AjuI	GAANNNNNNNTTGG	4 cut(s)	255, 287, 1122, 1154
Alw21I	GWGCWC	5 cut(s)	419, 471, 1189, 1768, 2688
Alw26I	GTCTC	6 cut(s)	455, 603, 915, 974, 2089, 2357
Alw44I	GTGCAC	1 cut(s)	1764
AlwI	GGATC	2 cut(s)	1344, 1357
AlwNI	CAGNNNCTG	2 cut(s)	178, 2087
Ama87I	CYCGRG	1 cut(s)	2647
Aor13HI	TCCGGA	1 cut(s)	1122
AoxI	GGCC	6 cut(s)	518, 699, 720, 863, 1718, 2407
ApaLI	GTGCAC	1 cut(s)	1764
ApeKI	GCWGC	8 cut(s)	228, 638, 656, 659, 845, 902, 2031, 2706
ApoI	RAATTY	5 cut(s)	481, 1054, 1147, 1336, 1858
AspA2I	CCTAGG	1 cut(s)	1421
AspLEI	GCGC	1 cut(s)	1651
AspS9I	GGNCC	3 cut(s)	680, 720, 2407
AsuC2I	CCSGG	2 cut(s)	615, 2411
AsuHPI	GGTGA	7 cut(s)	108, 386, 1670, 1763, 1961, 2596, 2614
AsuII	TTCGAA	2 cut(s)	23, 2733
AvaI	CYCGRG	1 cut(s)	2647
AvaII	GGWCC	1 cut(s)	680
AvrII	CCTAGG	1 cut(s)	1421
BaeGI	GKGCMC	1 cut(s)	1768
BamHI	GGATCC	1 cut(s)	1349
BanII	GRGCYC	3 cut(s)	735, 1367, 2688
BauI	CACGAG	1 cut(s)	2687
BbsI	GAAGAC	1 cut(s)	963
Bbv12I	GWGCWC	5 cut(s)	419, 471, 1189, 1768, 2688
BbvI	GCAGC	8 cut(s)	240, 625, 643, 646, 832, 889, 2043, 2718
BccI	CCATC	6 cut(s)	694, 757, 1436, 1729, 2474, 2715
BceAI	ACGGC	2 cut(s)	2538, 2731
BcgI	CGANNNNNNTGC	2 cut(s)	2729, 2763
BciT130I	CCWGG	6 cut(s)	149, 301, 478, 678, 1354, 2494
BciVI	GTATCC	1 cut(s)	2564
BcnI	CCSGG	2 cut(s)	615, 2411
BcoDI	GTCTC	6 cut(s)	455, 603, 915, 974, 2089, 2357
BfaI	CTAG	8 cut(s)	201, 288, 555, 630, 1422, 1815, 2076, 2415
BfmI	CTRYAG	2 cut(s)	1540, 2274
BfrI	CTTAAG	2 cut(s)	914, 1190
BfuAI	ACCTGC	2 cut(s)	26, 2154
BfuI	GTATCC	1 cut(s)	2564
BglI	GCCNNNNNGGC	1 cut(s)	2715
BlnI	CCTAGG	1 cut(s)	1421
Bme1390I	CCNGG	8 cut(s)	149, 301, 478, 615, 678, 1354, 2411, 2494
Bme18I	GGWCC	1 cut(s)	680
BmeT110I	CYCGRG	1 cut(s)	2647
BmgT120I	GGNCC	3 cut(s)	680, 720, 2407
BmiI	GGNNCC	4 cut(s)	721, 1127, 1351, 2097
BmrFI	CCNGG	8 cut(s)	149, 301, 478, 615, 678, 1354, 2411, 2494
BmrI	ACTGGG	2 cut(s)	1632, 1955
BmsI	GCATC	7 cut(s)	184, 376, 498, 779, 1744, 2046, 2080
BmuI	ACTGGG	2 cut(s)	1632, 1955
BpiI	GAAGAC	1 cut(s)	963
BplI	GAGNNNNNCTC	4 cut(s)	335, 367, 1091, 1123
BpmI	CTGGAG	1 cut(s)	2471
Bpu10I	CCTNAGC	1 cut(s)	2498
Bpu14I	TTCGAA	2 cut(s)	23, 2733
BpuMI	CCSGG	2 cut(s)	615, 2411
BsaBI	GATNNNNATC	2 cut(s)	390, 1926
BsaHI	GRCGYC	1 cut(s)	2615
BsaJI	CCNNGG	5 cut(s)	148, 613, 696, 1421, 1681
BsaWI	WCCGGW	1 cut(s)	1122
BsaXI	ACNNNNNCTCC	4 cut(s)	2583, 2613, 2748, 2778
Bsc4I	CCNNNNNNNGG	7 cut(s)	716, 791, 1027, 1902, 2416, 2499, 2560
Bse118I	RCCGGY	1 cut(s)	1748
Bse3DI	GCAATG	2 cut(s)	545, 1380
Bse8I	GATNNNNATC	2 cut(s)	390, 1926
BseAI	TCCGGA	1 cut(s)	1122
BseBI	CCWGG	6 cut(s)	149, 301, 478, 678, 1354, 2494
BseDI	CCNNGG	5 cut(s)	148, 613, 696, 1421, 1681
BseGI	GGATG	8 cut(s)	199, 329, 770, 953, 1582, 1870, 2071, 2174
BseJI	GATNNNNATC	2 cut(s)	390, 1926
BseLI	CCNNNNNNNGG	7 cut(s)	716, 791, 1027, 1902, 2416, 2499, 2560
BseMI	GCAATG	2 cut(s)	545, 1380
BseMII	CTCAG	5 cut(s)	333, 1332, 1380, 1650, 1854
BseRI	GAGGAG	2 cut(s)	1962, 2620
BseSI	GKGCMC	1 cut(s)	1768
BseXI	GCAGC	8 cut(s)	240, 625, 643, 646, 832, 889, 2043, 2718
BshFI	GGCC	6 cut(s)	520, 701, 722, 865, 1720, 2409
BsiHKAI	GWGCWC	5 cut(s)	419, 471, 1189, 1768, 2688
BsiHKCI	CYCGRG	1 cut(s)	2647
BsiSI	CCGG	4 cut(s)	615, 1123, 1749, 2410
BslFI	GGGAC	3 cut(s)	862, 933, 1639
BslI	CCNNNNNNNGG	7 cut(s)	716, 791, 1027, 1902, 2416, 2499, 2560
BsmAI	GTCTC	6 cut(s)	455, 603, 915, 974, 2089, 2357
BsmFI	GGGAC	3 cut(s)	862, 933, 1639
BsmI	GAATGC	3 cut(s)	79, 640, 1979
BsnI	GGCC	6 cut(s)	520, 701, 722, 865, 1720, 2409
BsoBI	CYCGRG	1 cut(s)	2647
Bsp119I	TTCGAA	2 cut(s)	23, 2733
Bsp1286I	GDGCHC	7 cut(s)	419, 471, 735, 1189, 1367, 1768, 2688
Bsp13I	TCCGGA	1 cut(s)	1122
Bsp1407I	TGTACA	2 cut(s)	2522, 2634
Bsp143I	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
BspACI	CCGC	9 cut(s)	48, 551, 693, 1827, 1915, 2068, 2259, 2484, 2565
BspANI	GGCC	6 cut(s)	520, 701, 722, 865, 1720, 2409
BspCNI	CTCAG	5 cut(s)	334, 1331, 1379, 1649, 1853
BspEI	TCCGGA	1 cut(s)	1122
BspHI	TCATGA	2 cut(s)	421, 1819
BspLI	GGNNCC	4 cut(s)	721, 1127, 1351, 2097
BspMI	ACCTGC	2 cut(s)	26, 2154
BspPI	GGATC	2 cut(s)	1344, 1357
BspQI	GCTCTTC	1 cut(s)	1649
BspT104I	TTCGAA	2 cut(s)	23, 2733
BspTI	CTTAAG	2 cut(s)	914, 1190
BsrDI	GCAATG	2 cut(s)	545, 1380
BsrFI	RCCGGY	1 cut(s)	1748
BsrGI	TGTACA	2 cut(s)	2522, 2634
BssAI	RCCGGY	1 cut(s)	1748
BssECI	CCNNGG	5 cut(s)	148, 613, 696, 1421, 1681
BssMI	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
BssNI	GRCGYC	1 cut(s)	2615
BssSI	CACGAG	1 cut(s)	2687
BssT1I	CCWWGG	2 cut(s)	696, 1421
Bst2BI	CACGAG	1 cut(s)	2687
Bst2UI	CCWGG	6 cut(s)	149, 301, 478, 678, 1354, 2494
Bst6I	CTCTTC	4 cut(s)	730, 1649, 2444, 2455
BstACI	GRCGYC	1 cut(s)	2615
BstAFI	CTTAAG	2 cut(s)	914, 1190
BstAPI	GCANNNNNTGC	1 cut(s)	2065
BstAUI	TGTACA	2 cut(s)	2522, 2634
BstBI	TTCGAA	2 cut(s)	23, 2733
BstC8I	GCNNGC	1 cut(s)	1966
BstDEI	CTNAG	8 cut(s)	342, 564, 906, 1318, 1366, 1636, 1840, 2498
BstEII	GGTNACC	1 cut(s)	1949
BstENI	CCTNNNNNAGG	1 cut(s)	714
BstF5I	GGATG	8 cut(s)	199, 329, 770, 953, 1582, 1870, 2071, 2174
BstHHI	GCGC	1 cut(s)	1651
BstKTI	GATC	9 cut(s)	560, 579, 820, 1352, 1468, 1616, 1678, 1924, 2333
BstMAI	GTCTC	6 cut(s)	455, 603, 915, 974, 2089, 2357
BstMBI	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
BstNI	CCWGG	6 cut(s)	149, 301, 478, 678, 1354, 2494
BstNSI	RCATGY	1 cut(s)	2665
BstPI	GGTNACC	1 cut(s)	1949
BstSCI	CCNGG	8 cut(s)	147, 299, 476, 613, 676, 1352, 2409, 2492
BstSFI	CTRYAG	2 cut(s)	1540, 2274
BstSLI	GKGCMC	1 cut(s)	1768
BstV1I	GCAGC	8 cut(s)	240, 625, 643, 646, 832, 889, 2043, 2718
BstV2I	GAAGAC	1 cut(s)	963
BstX2I	RGATCY	1 cut(s)	1349
BstXI	CCANNNNNNTGG	2 cut(s)	307, 1360
BstYI	RGATCY	1 cut(s)	1349
BsuI	GTATCC	1 cut(s)	2564
BsuRI	GGCC	6 cut(s)	520, 701, 722, 865, 1720, 2409
BtsCI	GGATG	8 cut(s)	199, 329, 770, 953, 1582, 1870, 2071, 2174
BtsI	GCAGTG	1 cut(s)	2604
BtsIMutI	CAGTG	6 cut(s)	168, 785, 1616, 1734, 2136, 2604
BveI	ACCTGC	2 cut(s)	26, 2154
Cac8I	GCNNGC	1 cut(s)	1966
CaiI	CAGNNNCTG	2 cut(s)	178, 2087
CciI	TCATGA	2 cut(s)	421, 1819
CfoI	GCGC	1 cut(s)	1651
Cfr10I	RCCGGY	1 cut(s)	1748
Cfr13I	GGNCC	3 cut(s)	680, 720, 2407
CseI	GACGC	2 cut(s)	175, 2604
Csp6I	GTAC	4 cut(s)	1835, 2151, 2523, 2635
CviQI	GTAC	4 cut(s)	1835, 2151, 2523, 2635
DdeI	CTNAG	8 cut(s)	342, 564, 906, 1318, 1366, 1636, 1840, 2498
DpnI	GATC	9 cut(s)	559, 578, 819, 1351, 1467, 1615, 1677, 1923, 2332
DpnII	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
DraI	TTTAAA	3 cut(s)	828, 2358, 2392
Eam1104I	CTCTTC	4 cut(s)	730, 1649, 2444, 2455
EarI	CTCTTC	4 cut(s)	730, 1649, 2444, 2455
Ecl136II	GAGCTC	1 cut(s)	2686
Eco130I	CCWWGG	2 cut(s)	696, 1421
Eco147I	AGGCCT	1 cut(s)	865
Eco24I	GRGCYC	3 cut(s)	735, 1367, 2688
Eco32I	GATATC	1 cut(s)	2812
Eco47I	GGWCC	1 cut(s)	680
Eco53kI	GAGCTC	1 cut(s)	2686
Eco57I	CTGAAG	8 cut(s)	711, 786, 960, 1164, 1572, 1710, 2208, 2646
Eco88I	CYCGRG	1 cut(s)	2647
Eco91I	GGTNACC	1 cut(s)	1949
EcoICRI	GAGCTC	1 cut(s)	2686
EcoNI	CCTNNNNNAGG	1 cut(s)	714
EcoO109I	RGGNCCY	1 cut(s)	720
EcoO65I	GGTNACC	1 cut(s)	1949
EcoRI	GAATTC	1 cut(s)	481
EcoRII	CCWGG	6 cut(s)	147, 299, 476, 676, 1352, 2492
EcoRV	GATATC	1 cut(s)	2812
EcoT14I	CCWWGG	2 cut(s)	696, 1421
EcoT38I	GRGCYC	3 cut(s)	735, 1367, 2688
ErhI	CCWWGG	2 cut(s)	696, 1421
FaqI	GGGAC	3 cut(s)	862, 933, 1639
FauI	CCCGC	1 cut(s)	2558
FblI	GTMKAC	1 cut(s)	1166
FokI	GGATG	8 cut(s)	206, 316, 757, 960, 1589, 1877, 2058, 2161
FriOI	GRGCYC	3 cut(s)	735, 1367, 2688
FspBI	CTAG	8 cut(s)	201, 288, 555, 630, 1422, 1815, 2076, 2415
FspI	TGCGCA	1 cut(s)	1650
GlaI	GCGC	1 cut(s)	1650
GsuI	CTGGAG	1 cut(s)	2471
HaeIII	GGCC	6 cut(s)	520, 701, 722, 865, 1720, 2409
HapII	CCGG	4 cut(s)	615, 1123, 1749, 2410
HgaI	GACGC	2 cut(s)	175, 2604
HhaI	GCGC	1 cut(s)	1651
Hin1I	GRCGYC	1 cut(s)	2615
Hin6I	GCGC	1 cut(s)	1649
HinP1I	GCGC	1 cut(s)	1649
HpaII	CCGG	4 cut(s)	615, 1123, 1749, 2410
HphI	GGTGA	7 cut(s)	108, 386, 1670, 1763, 1961, 2596, 2614
Hpy166II	GTNNAC	6 cut(s)	1167, 1688, 1766, 1837, 2311, 2635
Hpy188III	TCNNGA	9 cut(s)	84, 422, 444, 774, 821, 953, 1123, 1820, 2093
Hpy8I	GTNNAC	6 cut(s)	1167, 1688, 1766, 1837, 2311, 2635
HpyAV	CCTTC	5 cut(s)	11, 260, 733, 1251, 2109
HpyCH4IV	ACGT	1 cut(s)	223
HpyF3I	CTNAG	8 cut(s)	342, 564, 906, 1318, 1366, 1636, 1840, 2498
HpySE526I	ACGT	1 cut(s)	223
Hsp92I	GRCGYC	1 cut(s)	2615
HspAI	GCGC	1 cut(s)	1649
Kpn2I	TCCGGA	1 cut(s)	1122
Kzo9I	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
LguI	GCTCTTC	1 cut(s)	1649
LmnI	GCTCC	5 cut(s)	275, 466, 1125, 1898, 1917
Lsp1109I	GCAGC	8 cut(s)	240, 625, 643, 646, 832, 889, 2043, 2718
LweI	GCATC	7 cut(s)	184, 376, 498, 779, 1744, 2046, 2080
MaeI	CTAG	8 cut(s)	201, 288, 555, 630, 1422, 1815, 2076, 2415
MaeII	ACGT	1 cut(s)	223
MaeIII	GTNAC	8 cut(s)	163, 253, 432, 1307, 1490, 1733, 1949, 2144
MalI	GATC	9 cut(s)	559, 578, 819, 1351, 1467, 1615, 1677, 1923, 2332
MboI	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
MfeI	CAATTG	3 cut(s)	522, 1848, 2819
MflI	RGATCY	1 cut(s)	1349
MhlI	GDGCHC	7 cut(s)	419, 471, 735, 1189, 1367, 1768, 2688
MlyI	GAGTC	3 cut(s)	902, 2016, 2498
MmeI	TCCRAC	3 cut(s)	1284, 2517, 2633
MroI	TCCGGA	1 cut(s)	1122
MspA1I	CMGCKG	1 cut(s)	61
MspCI	CTTAAG	2 cut(s)	914, 1190
MspI	CCGG	4 cut(s)	615, 1123, 1749, 2410
MspR9I	CCNGG	8 cut(s)	149, 301, 478, 615, 678, 1354, 2411, 2494
MunI	CAATTG	3 cut(s)	522, 1848, 2819
Mva1269I	GAATGC	3 cut(s)	79, 640, 1979
MvaI	CCWGG	6 cut(s)	149, 301, 478, 678, 1354, 2494
NciI	CCSGG	2 cut(s)	615, 2411
NdeII	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
NlaIV	GGNNCC	4 cut(s)	721, 1127, 1351, 2097
NmuCI	GTSAC	4 cut(s)	163, 1307, 1490, 1949
NsbI	TGCGCA	1 cut(s)	1650
NspI	RCATGY	1 cut(s)	2665
NspV	TTCGAA	2 cut(s)	23, 2733
PagI	TCATGA	2 cut(s)	421, 1819
PceI	AGGCCT	1 cut(s)	865
PciSI	GCTCTTC	1 cut(s)	1649
PcsI	WCGNNNNNNNCGW	1 cut(s)	2685
PctI	GAATGC	3 cut(s)	79, 640, 1979
PfeI	GAWTC	9 cut(s)	113, 1292, 1519, 1808, 1823, 2123, 2255, 2321, 2783
PflMI	CCANNNNNTGG	1 cut(s)	791
PfoI	TCCNGGA	1 cut(s)	1352
PleI	GAGTC	3 cut(s)	901, 2015, 2497
PpsI	GAGTC	3 cut(s)	901, 2015, 2497
PsiI	TTATAA	1 cut(s)	2426
Psp124BI	GAGCTC	1 cut(s)	2688
Psp6I	CCWGG	6 cut(s)	147, 299, 476, 676, 1352, 2492
PspEI	GGTNACC	1 cut(s)	1949
PspGI	CCWGG	6 cut(s)	147, 299, 476, 676, 1352, 2492
PspN4I	GGNNCC	4 cut(s)	721, 1127, 1351, 2097
PspPI	GGNCC	3 cut(s)	680, 720, 2407
PstNI	CAGNNNCTG	2 cut(s)	178, 2087
PsuI	RGATCY	1 cut(s)	1349
PvuII	CAGCTG	1 cut(s)	61
RsaI	GTAC	4 cut(s)	1836, 2152, 2524, 2636
RsaNI	GTAC	4 cut(s)	1835, 2151, 2523, 2635
SacI	GAGCTC	1 cut(s)	2688
SapI	GCTCTTC	1 cut(s)	1649
Sau3AI	GATC	9 cut(s)	557, 576, 817, 1349, 1465, 1613, 1675, 1921, 2330
Sau96I	GGNCC	3 cut(s)	680, 720, 2407
SchI	GAGTC	3 cut(s)	902, 2016, 2498
ScrFI	CCNGG	8 cut(s)	149, 301, 478, 615, 678, 1354, 2411, 2494
SduI	GDGCHC	7 cut(s)	419, 471, 735, 1189, 1367, 1768, 2688
SfaNI	GCATC	7 cut(s)	184, 376, 498, 779, 1744, 2046, 2080
SfcI	CTRYAG	2 cut(s)	1540, 2274
SfuI	TTCGAA	2 cut(s)	23, 2733
SinI	GGWCC	1 cut(s)	680
SmlI	CTYRAG	2 cut(s)	914, 1190
SmoI	CTYRAG	2 cut(s)	914, 1190
SseBI	AGGCCT	1 cut(s)	865
SsiI	CCGC	9 cut(s)	48, 551, 693, 1827, 1915, 2068, 2259, 2484, 2565
SspI	AATATT	2 cut(s)	2354, 2778
SspMI	CTAG	8 cut(s)	201, 288, 555, 630, 1422, 1815, 2076, 2415
SstI	GAGCTC	1 cut(s)	2688
StuI	AGGCCT	1 cut(s)	865
StyD4I	CCNGG	8 cut(s)	147, 299, 476, 613, 676, 1352, 2409, 2492
StyI	CCWWGG	2 cut(s)	696, 1421
TaiI	ACGT	1 cut(s)	226
TatI	WGTACW	4 cut(s)	1834, 2150, 2522, 2634
TauI	GCSGC	3 cut(s)	553, 2071, 2487
TfiI	GAWTC	9 cut(s)	113, 1292, 1519, 1808, 1823, 2123, 2255, 2321, 2783
TscAI	CASTG	6 cut(s)	168, 792, 1623, 1734, 2143, 2604
TseFI	GTSAC	4 cut(s)	163, 1307, 1490, 1949
TseI	GCWGC	8 cut(s)	228, 638, 656, 659, 845, 902, 2031, 2706
Tsp45I	GTSAC	4 cut(s)	163, 1307, 1490, 1949
TspGWI	ACGGA	1 cut(s)	2218
TspRI	CASTG	6 cut(s)	168, 792, 1623, 1734, 2143, 2604
Van91I	CCANNNNNTGG	1 cut(s)	791
Vha464I	CTTAAG	2 cut(s)	914, 1190
VneI	GTGCAC	1 cut(s)	1764
VpaK11BI	GGWCC	1 cut(s)	680
XagI	CCTNNNNNAGG	1 cut(s)	714
XapI	RAATTY	5 cut(s)	481, 1054, 1147, 1336, 1858
XceI	RCATGY	1 cut(s)	2665
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1530, 1961
XmaJI	CCTAGG	1 cut(s)	1421
XmiI	GTMKAC	1 cut(s)	1166
XspI	CTAG	8 cut(s)	201, 288, 555, 630, 1422, 1815, 2076, 2415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.