f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26000 |
| fragaria_vesca | FvH4_4g24590 |
| malus_domestica | MD13G1110000.v1.1 MD16G1109900.v1.1 |
| prunus_persica | Prupe.1G234900_v2.0.a1 |
| pyrus_communis | pycom13g09570 pycom16g09340 |
| rosa_chinensis | RchiOBHm_Chr4g0431591 |
| rosa_laevigata | RLG00000006905 |
| rosa_multiflora | Rmu_sc0008423.1_g000001 Rmu_sc0035802.1_g000001 Rmu_sc0035803.1_g000001 Rmu_ssc0000203.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00373050 |
| rosa_rugosa | Rorug04G0251100 |
| rosa_samantha | Rh4AG307800 Rh4BG315400 Rh4CG330900 Rh4DG310300 |
| rosa_wichuraiana | Rw4G026680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 475 |
| Acc36I | ACCTGC | 2 cut(s) | 475, 529 |
| Acc65I | GGTACC | 1 cut(s) | 87 |
| AccB1I | GGYRCC | 1 cut(s) | 87 |
| AciI | CCGC | 3 cut(s) | 632, 1273, 1280 |
| AclWI | GGATC | 7 cut(s) | 158, 171, 441, 453, 466, 739, 858 |
| AcoI | YGGCCR | 1 cut(s) | 273 |
| AcsI | RAATTY | 6 cut(s) | 10, 659, 725, 1000, 1235, 1344 |
| AcuI | CTGAAG | 1 cut(s) | 1073 |
| AfaI | GTAC | 5 cut(s) | 89, 262, 846, 1098, 1108 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 599, 915, 1393 |
| AflII | CTTAAG | 1 cut(s) | 1141 |
| AgsI | TTSAA | 9 cut(s) | 10, 376, 529, 622, 675, 1067, 1226, 1234, 1343 |
| AjnI | CCWGG | 2 cut(s) | 1017, 1099 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1226, 1258 |
| AluBI | AGCT | 8 cut(s) | 192, 803, 815, 992, 1081, 1140, 1546, 1623 |
| AluI | AGCT | 8 cut(s) | 192, 803, 815, 992, 1081, 1140, 1546, 1623 |
| Alw21I | GWGCWC | 2 cut(s) | 994, 1465 |
| Alw26I | GTCTC | 2 cut(s) | 1105, 1560 |
| AlwI | GGATC | 7 cut(s) | 158, 171, 441, 453, 466, 739, 858 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1437 |
| AoxI | GGCC | 5 cut(s) | 3, 36, 134, 273, 1434 |
| ApeKI | GCWGC | 3 cut(s) | 189, 1261, 1543 |
| ApoI | RAATTY | 6 cut(s) | 10, 659, 725, 1000, 1235, 1344 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 969 |
| Asp718I | GGTACC | 1 cut(s) | 87 |
| AspS9I | GGNCC | 3 cut(s) | 37, 238, 1434 |
| AsuHPI | GGTGA | 7 cut(s) | 57, 499, 668, 704, 734, 914, 1283 |
| AsuII | TTCGAA | 2 cut(s) | 146, 209 |
| AvaII | GGWCC | 1 cut(s) | 238 |
| BaeGI | GKGCMC | 1 cut(s) | 1250 |
| BamHI | GGATCC | 2 cut(s) | 163, 458 |
| BanI | GGYRCC | 1 cut(s) | 87 |
| BanII | GRGCYC | 1 cut(s) | 994 |
| Bbv12I | GWGCWC | 2 cut(s) | 994, 1465 |
| BbvI | GCAGC | 3 cut(s) | 201, 1273, 1555 |
| BceAI | ACGGC | 2 cut(s) | 121, 288 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 131, 165 |
| BciT130I | CCWGG | 2 cut(s) | 1019, 1101 |
| BciVI | GTATCC | 1 cut(s) | 1564 |
| BcoDI | GTCTC | 2 cut(s) | 1105, 1560 |
| BfaI | CTAG | 2 cut(s) | 1353, 1639 |
| BfrI | CTTAAG | 1 cut(s) | 1141 |
| BfuAI | ACCTGC | 2 cut(s) | 475, 529 |
| BfuI | GTATCC | 1 cut(s) | 1564 |
| BglII | AGATCT | 1 cut(s) | 878 |
| BisI | GCNGC | 4 cut(s) | 190, 1262, 1280, 1544 |
| BlsI | GCNGC | 4 cut(s) | 191, 1263, 1281, 1545 |
| Bme1390I | CCNGG | 2 cut(s) | 1019, 1101 |
| Bme18I | GGWCC | 1 cut(s) | 238 |
| BmgT120I | GGNCC | 3 cut(s) | 37, 238, 1434 |
| BmiI | GGNNCC | 5 cut(s) | 89, 165, 201, 240, 460 |
| BmrFI | CCNGG | 2 cut(s) | 1019, 1101 |
| BmsI | GCATC | 6 cut(s) | 685, 694, 707, 716, 1346, 1423 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1447, 1479 |
| BpmI | CTGGAG | 2 cut(s) | 311, 1535 |
| Bpu14I | TTCGAA | 2 cut(s) | 146, 209 |
| BpuEI | CTTGAG | 4 cut(s) | 978, 1033, 1387, 1535 |
| BsaJI | CCNNGG | 8 cut(s) | 137, 416, 463, 559, 718, 898, 1294, 1633 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 599, 915, 1393 |
| Bse1I | ACTGG | 2 cut(s) | 203, 309 |
| Bse3DI | GCAATG | 2 cut(s) | 352, 658 |
| BseBI | CCWGG | 2 cut(s) | 1019, 1101 |
| BseDI | CCNNGG | 8 cut(s) | 137, 416, 463, 559, 718, 898, 1294, 1633 |
| BseGI | GGATG | 6 cut(s) | 160, 334, 710, 1109, 1414, 1586 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 599, 915, 1393 |
| BseMI | GCAATG | 2 cut(s) | 352, 658 |
| BseMII | CTCAG | 6 cut(s) | 39, 1129, 1436, 1478, 1542, 1571 |
| BseNI | ACTGG | 2 cut(s) | 203, 309 |
| BseRI | GAGGAG | 1 cut(s) | 641 |
| BseSI | GKGCMC | 1 cut(s) | 1250 |
| BseXI | GCAGC | 3 cut(s) | 201, 1273, 1555 |
| BseYI | CCCAGC | 1 cut(s) | 1387 |
| BsgI | GTGCAG | 1 cut(s) | 1423 |
| BshFI | GGCC | 5 cut(s) | 5, 38, 136, 275, 1436 |
| BshNI | GGYRCC | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 2 cut(s) | 994, 1465 |
| BsiSI | CCGG | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 352 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 599, 915, 1393 |
| BsmAI | GTCTC | 2 cut(s) | 1105, 1560 |
| BsmFI | GGGAC | 1 cut(s) | 352 |
| BsmI | GAATGC | 2 cut(s) | 142, 1273 |
| BsnI | GGCC | 5 cut(s) | 5, 38, 136, 275, 1436 |
| Bsp119I | TTCGAA | 2 cut(s) | 146, 209 |
| Bsp1286I | GDGCHC | 3 cut(s) | 994, 1250, 1465 |
| Bsp143I | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| Bsp19I | CCATGG | 2 cut(s) | 559, 1633 |
| BspACI | CCGC | 3 cut(s) | 632, 1273, 1280 |
| BspANI | GGCC | 5 cut(s) | 5, 38, 136, 275, 1436 |
| BspCNI | CTCAG | 6 cut(s) | 40, 1128, 1435, 1477, 1541, 1570 |
| BspHI | TCATGA | 1 cut(s) | 805 |
| BspLI | GGNNCC | 5 cut(s) | 89, 165, 201, 240, 460 |
| BspMI | ACCTGC | 2 cut(s) | 475, 529 |
| BspPI | GGATC | 7 cut(s) | 158, 171, 441, 453, 466, 739, 858 |
| BspT104I | TTCGAA | 2 cut(s) | 146, 209 |
| BspT107I | GGYRCC | 1 cut(s) | 87 |
| BspTI | CTTAAG | 1 cut(s) | 1141 |
| BsrDI | GCAATG | 2 cut(s) | 352, 658 |
| BsrI | ACTGG | 2 cut(s) | 203, 309 |
| BssECI | CCNNGG | 8 cut(s) | 137, 416, 463, 559, 718, 898, 1294, 1633 |
| BssMI | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| BssT1I | CCWWGG | 3 cut(s) | 559, 718, 1633 |
| Bst2UI | CCWGG | 2 cut(s) | 1019, 1101 |
| Bst4CI | ACNGT | 3 cut(s) | 871, 895, 1490 |
| Bst6I | CTCTTC | 2 cut(s) | 471, 1221 |
| BstAFI | CTTAAG | 1 cut(s) | 1141 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 704, 1437, 1446 |
| BstBI | TTCGAA | 2 cut(s) | 146, 209 |
| BstC8I | GCNNGC | 5 cut(s) | 134, 1273, 1277, 1438, 1442 |
| BstDEI | CTNAG | 8 cut(s) | 48, 514, 830, 1115, 1422, 1464, 1528, 1557 |
| BstDSI | CCRYGG | 5 cut(s) | 137, 463, 559, 898, 1633 |
| BstEII | GGTNACC | 1 cut(s) | 902 |
| BstF5I | GGATG | 6 cut(s) | 160, 334, 710, 1109, 1414, 1586 |
| BstKTI | GATC | 8 cut(s) | 166, 226, 436, 461, 734, 853, 881, 937 |
| BstMAI | GTCTC | 2 cut(s) | 1105, 1560 |
| BstMBI | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 704, 1437, 1446, 1629 |
| BstNI | CCWGG | 2 cut(s) | 1019, 1101 |
| BstPI | GGTNACC | 1 cut(s) | 902 |
| BstSCI | CCNGG | 2 cut(s) | 1017, 1099 |
| BstSLI | GKGCMC | 1 cut(s) | 1250 |
| BstV1I | GCAGC | 3 cut(s) | 201, 1273, 1555 |
| BstX2I | RGATCY | 4 cut(s) | 163, 458, 850, 878 |
| BstYI | RGATCY | 4 cut(s) | 163, 458, 850, 878 |
| BsuI | GTATCC | 1 cut(s) | 1564 |
| BsuRI | GGCC | 5 cut(s) | 5, 38, 136, 275, 1436 |
| BtgI | CCRYGG | 5 cut(s) | 137, 463, 559, 898, 1633 |
| BtsCI | GGATG | 6 cut(s) | 160, 334, 710, 1109, 1414, 1586 |
| BtsIMutI | CAGTG | 3 cut(s) | 1248, 1472, 1495 |
| BveI | ACCTGC | 2 cut(s) | 475, 529 |
| Cac8I | GCNNGC | 5 cut(s) | 134, 1273, 1277, 1438, 1442 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1437 |
| CciI | TCATGA | 1 cut(s) | 805 |
| Cfr13I | GGNCC | 3 cut(s) | 37, 238, 1434 |
| Csp6I | GTAC | 5 cut(s) | 88, 261, 845, 1097, 1107 |
| CviAII | CATG | 6 cut(s) | 250, 560, 599, 806, 1607, 1634 |
| CviQI | GTAC | 5 cut(s) | 88, 261, 845, 1097, 1107 |
| DdeI | CTNAG | 8 cut(s) | 48, 514, 830, 1115, 1422, 1464, 1528, 1557 |
| DpnI | GATC | 8 cut(s) | 165, 225, 435, 460, 733, 852, 880, 936 |
| DpnII | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| EaeI | YGGCCR | 1 cut(s) | 273 |
| Eam1104I | CTCTTC | 2 cut(s) | 471, 1221 |
| EarI | CTCTTC | 2 cut(s) | 471, 1221 |
| Ecl136II | GAGCTC | 1 cut(s) | 992 |
| Eco130I | CCWWGG | 3 cut(s) | 559, 718, 1633 |
| Eco24I | GRGCYC | 1 cut(s) | 994 |
| Eco47I | GGWCC | 1 cut(s) | 238 |
| Eco53kI | GAGCTC | 1 cut(s) | 992 |
| Eco57I | CTGAAG | 1 cut(s) | 1073 |
| Eco91I | GGTNACC | 1 cut(s) | 902 |
| EcoICRI | GAGCTC | 1 cut(s) | 992 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1434 |
| EcoO65I | GGTNACC | 1 cut(s) | 902 |
| EcoRI | GAATTC | 1 cut(s) | 659 |
| EcoRII | CCWGG | 2 cut(s) | 1017, 1099 |
| EcoT14I | CCWWGG | 3 cut(s) | 559, 718, 1633 |
| EcoT22I | ATGCAT | 3 cut(s) | 700, 709, 1451 |
| EcoT38I | GRGCYC | 1 cut(s) | 994 |
| ErhI | CCWWGG | 3 cut(s) | 559, 718, 1633 |
| FaeI | CATG | 6 cut(s) | 253, 563, 602, 809, 1610, 1637 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 250, 282, 1268, 1300 |
| FaqI | GGGAC | 1 cut(s) | 352 |
| FatI | CATG | 6 cut(s) | 249, 559, 598, 805, 1606, 1633 |
| FauI | CCCGC | 1 cut(s) | 1280 |
| Fnu4HI | GCNGC | 4 cut(s) | 190, 1262, 1280, 1544 |
| FokI | GGATG | 6 cut(s) | 167, 341, 697, 1116, 1401, 1573 |
| FriOI | GRGCYC | 1 cut(s) | 994 |
| Fsp4HI | GCNGC | 4 cut(s) | 190, 1262, 1280, 1544 |
| FspBI | CTAG | 2 cut(s) | 1353, 1639 |
| GluI | GCNGC | 4 cut(s) | 190, 1262, 1280, 1544 |
| GsaI | CCCAGC | 1 cut(s) | 1391 |
| GsuI | CTGGAG | 2 cut(s) | 311, 1535 |
| HaeIII | GGCC | 5 cut(s) | 5, 38, 136, 275, 1436 |
| HapII | CCGG | 1 cut(s) | 35 |
| Hin1II | CATG | 6 cut(s) | 253, 563, 602, 809, 1610, 1637 |
| HincII | GTYRAC | 1 cut(s) | 547 |
| HindII | GTYRAC | 1 cut(s) | 547 |
| HindIII | AAGCTT | 1 cut(s) | 1079 |
| HinfI | GANTC | 6 cut(s) | 76, 148, 402, 641, 1113, 1615 |
| HpaII | CCGG | 1 cut(s) | 35 |
| HphI | GGTGA | 7 cut(s) | 57, 499, 668, 704, 734, 914, 1283 |
| Hpy166II | GTNNAC | 2 cut(s) | 547, 1097 |
| Hpy188I | TCNGA | 8 cut(s) | 49, 109, 238, 420, 703, 1032, 1053, 1531 |
| Hpy188III | TCNNGA | 7 cut(s) | 152, 406, 473, 584, 806, 1514, 1559 |
| Hpy8I | GTNNAC | 2 cut(s) | 547, 1097 |
| HpyAV | CCTTC | 3 cut(s) | 243, 676, 724 |
| HpyCH4III | ACNGT | 3 cut(s) | 871, 895, 1490 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 704, 1437, 1446, 1629 |
| HpyF3I | CTNAG | 8 cut(s) | 48, 514, 830, 1115, 1422, 1464, 1528, 1557 |
| Hsp92II | CATG | 6 cut(s) | 253, 563, 602, 809, 1610, 1637 |
| KpnI | GGTACC | 1 cut(s) | 91 |
| Kzo9I | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| LmnI | GCTCC | 3 cut(s) | 199, 812, 1411 |
| Lsp1109I | GCAGC | 3 cut(s) | 201, 1273, 1555 |
| LweI | GCATC | 6 cut(s) | 685, 694, 707, 716, 1346, 1423 |
| MaeI | CTAG | 2 cut(s) | 1353, 1639 |
| MaeIII | GTNAC | 6 cut(s) | 63, 470, 491, 902, 1207, 1328 |
| MalI | GATC | 8 cut(s) | 165, 225, 435, 460, 733, 852, 880, 936 |
| MboI | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| MboII | GAAGA | 4 cut(s) | 488, 962, 1045, 1238 |
| MfeI | CAATTG | 1 cut(s) | 977 |
| MflI | RGATCY | 4 cut(s) | 163, 458, 850, 878 |
| MhlI | GDGCHC | 3 cut(s) | 994, 1250, 1465 |
| MlyI | GAGTC | 1 cut(s) | 1107 |
| MmeI | TCCRAC | 4 cut(s) | 769, 1442, 1517, 1614 |
| Mph1103I | ATGCAT | 3 cut(s) | 700, 709, 1451 |
| MroXI | GAANNNNTTC | 1 cut(s) | 969 |
| MseI | TTAA | 3 cut(s) | 1142, 1152, 1482 |
| MspCI | CTTAAG | 1 cut(s) | 1141 |
| MspI | CCGG | 1 cut(s) | 35 |
| MspR9I | CCNGG | 2 cut(s) | 1019, 1101 |
| MunI | CAATTG | 1 cut(s) | 977 |
| Mva1269I | GAATGC | 2 cut(s) | 142, 1273 |
| MvaI | CCWGG | 2 cut(s) | 1019, 1101 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 704, 1437, 1446, 1629 |
| NcoI | CCATGG | 2 cut(s) | 559, 1633 |
| NdeII | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| NlaIII | CATG | 6 cut(s) | 253, 563, 602, 809, 1610, 1637 |
| NlaIV | GGNNCC | 5 cut(s) | 89, 165, 201, 240, 460 |
| NmuCI | GTSAC | 6 cut(s) | 63, 470, 491, 902, 1207, 1328 |
| NsiI | ATGCAT | 3 cut(s) | 700, 709, 1451 |
| NspV | TTCGAA | 2 cut(s) | 146, 209 |
| PagI | TCATGA | 1 cut(s) | 805 |
| PaqCI | CACCTGC | 1 cut(s) | 475 |
| PctI | GAATGC | 2 cut(s) | 142, 1273 |
| PdmI | GAANNNNTTC | 1 cut(s) | 969 |
| PfeI | GAWTC | 5 cut(s) | 76, 148, 402, 641, 1615 |
| PkrI | GCNGC | 4 cut(s) | 191, 1263, 1281, 1545 |
| PleI | GAGTC | 1 cut(s) | 1107 |
| PpsI | GAGTC | 1 cut(s) | 1107 |
| Psp124BI | GAGCTC | 1 cut(s) | 994 |
| Psp6I | CCWGG | 2 cut(s) | 1017, 1099 |
| PspEI | GGTNACC | 1 cut(s) | 902 |
| PspFI | CCCAGC | 1 cut(s) | 1387 |
| PspGI | CCWGG | 2 cut(s) | 1017, 1099 |
| PspN4I | GGNNCC | 5 cut(s) | 89, 165, 201, 240, 460 |
| PspPI | GGNCC | 3 cut(s) | 37, 238, 1434 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1437 |
| PsuI | RGATCY | 4 cut(s) | 163, 458, 850, 878 |
| RsaI | GTAC | 5 cut(s) | 89, 262, 846, 1098, 1108 |
| RsaNI | GTAC | 5 cut(s) | 88, 261, 845, 1097, 1107 |
| SacI | GAGCTC | 1 cut(s) | 994 |
| SaqAI | TTAA | 3 cut(s) | 1142, 1152, 1482 |
| SatI | GCNGC | 4 cut(s) | 190, 1262, 1280, 1544 |
| Sau3AI | GATC | 8 cut(s) | 163, 223, 433, 458, 731, 850, 878, 934 |
| Sau96I | GGNCC | 3 cut(s) | 37, 238, 1434 |
| SchI | GAGTC | 1 cut(s) | 1107 |
| ScrFI | CCNGG | 2 cut(s) | 1019, 1101 |
| SduI | GDGCHC | 3 cut(s) | 994, 1250, 1465 |
| SfaNI | GCATC | 6 cut(s) | 685, 694, 707, 716, 1346, 1423 |
| SfuI | TTCGAA | 2 cut(s) | 146, 209 |
| SinI | GGWCC | 1 cut(s) | 238 |
| SmlI | CTYRAG | 5 cut(s) | 993, 1012, 1141, 1366, 1550 |
| SmoI | CTYRAG | 5 cut(s) | 993, 1012, 1141, 1366, 1550 |
| SsiI | CCGC | 3 cut(s) | 632, 1273, 1280 |
| SspI | AATATT | 1 cut(s) | 424 |
| SspMI | CTAG | 2 cut(s) | 1353, 1639 |
| SstI | GAGCTC | 1 cut(s) | 994 |
| StyD4I | CCNGG | 2 cut(s) | 1017, 1099 |
| StyI | CCWWGG | 3 cut(s) | 559, 718, 1633 |
| TaaI | ACNGT | 3 cut(s) | 871, 895, 1490 |
| TaqI | TCGA | 4 cut(s) | 22, 146, 209, 503 |
| TauI | GCSGC | 1 cut(s) | 1282 |
| TfiI | GAWTC | 5 cut(s) | 76, 148, 402, 641, 1615 |
| Tru1I | TTAA | 3 cut(s) | 1142, 1152, 1482 |
| Tru9I | TTAA | 3 cut(s) | 1142, 1152, 1482 |
| TscAI | CASTG | 3 cut(s) | 1255, 1472, 1495 |
| TseFI | GTSAC | 6 cut(s) | 63, 470, 491, 902, 1207, 1328 |
| TseI | GCWGC | 3 cut(s) | 189, 1261, 1543 |
| Tsp45I | GTSAC | 6 cut(s) | 63, 470, 491, 902, 1207, 1328 |
| TspDTI | ATGAA | 4 cut(s) | 372, 633, 978, 1623 |
| TspGWI | ACGGA | 1 cut(s) | 887 |
| TspRI | CASTG | 3 cut(s) | 1255, 1472, 1495 |
| Vha464I | CTTAAG | 1 cut(s) | 1141 |
| VpaK11BI | GGWCC | 1 cut(s) | 238 |
| XapI | RAATTY | 6 cut(s) | 10, 659, 725, 1000, 1235, 1344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 725 |
| XmnI | GAANNNNTTC | 1 cut(s) | 969 |
| XspI | CTAG | 2 cut(s) | 1353, 1639 |
| Zsp2I | ATGCAT | 3 cut(s) | 700, 709, 1451 |