FvH4_4g24590

f-box protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
26681698 .. 26685966
4269 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g24590.t1

Sequence Viewer

Length: 1641 bp
ATGGCCTTGAATTTTTCCCATCGACCATTCTTTCCGGCCCATCTGTCTGAGGACAATTTGGTGTCACCGATGAGGATTCGTAATGGGTACCTTGCCGATGGTATCTCGGAGAGGAATGGAGATGGTTTTGGCAGGCCGTGGCATTCGAATCGGGATGTGGAGGATCCCTTTGATAGATGTGATAGGGGCAGCTCACAGGAGCCAGTTTCGAATGACATTATTGATCTTTTGCCTTCGGACCCATTTGGCATGGATATAAGTACCACTTTTACGGCCATCACGGGTTGGCTGGAGGATTTGGAACTGGATTATGGGTGTTATGGGAGGGATGAGGTGGGGACGAGCAATGGGAATTATGAACTTTTTGCAGGATTGAACTTTATTTGGAATAATGCTATGAGATTCCAGACATTCCCTCGGAATATTGGGGTGGATCGTAAGTCTAAAGTAGGGAGTGGATCCCGTGGGTGTCACGAAGAGAAGCAGGTGAGTGACATATCCTCGAATGGTGGCTTAGTTGGGTGTTTGAAAGAAAAGCAGGTTGTTGACCCATCTTGCCATGGTGGGTGTTCCAAACAGGTTCTTGACACACCCTGTCATGGTGTGTTTGGTGGGTTTTTGAAAGAGGAGGCGGTTGATGATTCATCTTGCAATGGTGAATTCAGTAATTGTTCAAAAGGGAAGGGAGTTGGTGATGCATCTGATGCATCATCCTTCCAAGGTGAATTTGGATCAGCGTGTGTAGTGGCTGACATTTTGGATTGTGGTTTTTCCAATCAGCAAAATGTTGGAGATGGAGAAGCTCATGATGGAGCTTTGATGTTTGCCCTTAGTTATTTGGGAGTACGGGATCTACTTGTCGTAGAAACTGTTTGCAGATCTCTCTATTCTACTGTCCGTGGTGACCCCCTTATGTGGAGAAGTATTCACATAGATCAGCCACTAAACGAAAAAATCACAGATGAAGTTCTTCTGCAATTGACTAATAGAGCTCAAGGAAATTTACAATGCTTGAGCCTGGTTGAGTGTCCGAAGATTACTGATGATGGTCTGAAGCGTGTGCTTGAAAACAATCCCAAGCTTACAAAGTTGAGTGTACCTGGATGTACGAGACTCAGTATTGAGGGCATTGTGAATAGCTTAAGGGCTTTTAAGTCTAAAGGCGAACAAGGTGTGAAGTATCTACGAATTGGAGGACTTTATGGTGTGACACAGAAGCATTTTGAAGAGTTGAAATTTTTGTTGGGCACTGACCAAATGCAGCAGAATGCCCGCAAGCCGCACTTTTATCACCGAGGGAACTTTTATTTATCCTGTGATGATGATAGTGACATTGATATTGAAATTTGTCCTAGATGCCAAAACTTGAGGCTTGTTTATGACTGCCCAGCAGAGGCTTGTCAAGGAAAGGAGCATCCAACTCAGTTATGCAGGGCCTGCACGCTATGCATAGGGAGGTGTGCTCAGTGTGGTCGGTGCATTAACGACAGTGAATACGAGGAAACATTCTGTCTGGAGTTGCTTTGCTCAGATTGTTGGAAGCAGCTACTCAAGTCTCAGGAGGGGGAGGATACAGAGTTTGTTCCATCCAACTCTGCTGTTCTCCATGAACAGAATCATAGCTTATGTCGCCATGGCTAG

Protein Analysis

547

Amino Acids

60.38

Weight (kDa)

5.03

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 475
Acc36I ACCTGC 2 cut(s) 475, 529
Acc65I GGTACC 1 cut(s) 87
AccB1I GGYRCC 1 cut(s) 87
AciI CCGC 3 cut(s) 632, 1273, 1280
AclWI GGATC 7 cut(s) 158, 171, 441, 453, 466, 739, 858
AcoI YGGCCR 1 cut(s) 273
AcsI RAATTY 6 cut(s) 10, 659, 725, 1000, 1235, 1344
AcuI CTGAAG 1 cut(s) 1073
AfaI GTAC 5 cut(s) 89, 262, 846, 1098, 1108
AfiI CCNNNNNNNGG 3 cut(s) 599, 915, 1393
AflII CTTAAG 1 cut(s) 1141
AgsI TTSAA 9 cut(s) 10, 376, 529, 622, 675, 1067, 1226, 1234, 1343
AjnI CCWGG 2 cut(s) 1017, 1099
AjuI GAANNNNNNNTTGG 2 cut(s) 1226, 1258
AluBI AGCT 8 cut(s) 192, 803, 815, 992, 1081, 1140, 1546, 1623
AluI AGCT 8 cut(s) 192, 803, 815, 992, 1081, 1140, 1546, 1623
Alw21I GWGCWC 2 cut(s) 994, 1465
Alw26I GTCTC 2 cut(s) 1105, 1560
AlwI GGATC 7 cut(s) 158, 171, 441, 453, 466, 739, 858
AlwNI CAGNNNCTG 1 cut(s) 1437
AoxI GGCC 5 cut(s) 3, 36, 134, 273, 1434
ApeKI GCWGC 3 cut(s) 189, 1261, 1543
ApoI RAATTY 6 cut(s) 10, 659, 725, 1000, 1235, 1344
Asp700I GAANNNNTTC 1 cut(s) 969
Asp718I GGTACC 1 cut(s) 87
AspS9I GGNCC 3 cut(s) 37, 238, 1434
AsuHPI GGTGA 7 cut(s) 57, 499, 668, 704, 734, 914, 1283
AsuII TTCGAA 2 cut(s) 146, 209
AvaII GGWCC 1 cut(s) 238
BaeGI GKGCMC 1 cut(s) 1250
BamHI GGATCC 2 cut(s) 163, 458
BanI GGYRCC 1 cut(s) 87
BanII GRGCYC 1 cut(s) 994
Bbv12I GWGCWC 2 cut(s) 994, 1465
BbvI GCAGC 3 cut(s) 201, 1273, 1555
BceAI ACGGC 2 cut(s) 121, 288
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BciT130I CCWGG 2 cut(s) 1019, 1101
BciVI GTATCC 1 cut(s) 1564
BcoDI GTCTC 2 cut(s) 1105, 1560
BfaI CTAG 2 cut(s) 1353, 1639
BfrI CTTAAG 1 cut(s) 1141
BfuAI ACCTGC 2 cut(s) 475, 529
BfuI GTATCC 1 cut(s) 1564
BglII AGATCT 1 cut(s) 878
BisI GCNGC 4 cut(s) 190, 1262, 1280, 1544
BlsI GCNGC 4 cut(s) 191, 1263, 1281, 1545
Bme1390I CCNGG 2 cut(s) 1019, 1101
Bme18I GGWCC 1 cut(s) 238
BmgT120I GGNCC 3 cut(s) 37, 238, 1434
BmiI GGNNCC 5 cut(s) 89, 165, 201, 240, 460
BmrFI CCNGG 2 cut(s) 1019, 1101
BmsI GCATC 6 cut(s) 685, 694, 707, 716, 1346, 1423
BplI GAGNNNNNCTC 2 cut(s) 1447, 1479
BpmI CTGGAG 2 cut(s) 311, 1535
Bpu14I TTCGAA 2 cut(s) 146, 209
BpuEI CTTGAG 4 cut(s) 978, 1033, 1387, 1535
BsaJI CCNNGG 8 cut(s) 137, 416, 463, 559, 718, 898, 1294, 1633
Bsc4I CCNNNNNNNGG 3 cut(s) 599, 915, 1393
Bse1I ACTGG 2 cut(s) 203, 309
Bse3DI GCAATG 2 cut(s) 352, 658
BseBI CCWGG 2 cut(s) 1019, 1101
BseDI CCNNGG 8 cut(s) 137, 416, 463, 559, 718, 898, 1294, 1633
BseGI GGATG 6 cut(s) 160, 334, 710, 1109, 1414, 1586
BseLI CCNNNNNNNGG 3 cut(s) 599, 915, 1393
BseMI GCAATG 2 cut(s) 352, 658
BseMII CTCAG 6 cut(s) 39, 1129, 1436, 1478, 1542, 1571
BseNI ACTGG 2 cut(s) 203, 309
BseRI GAGGAG 1 cut(s) 641
BseSI GKGCMC 1 cut(s) 1250
BseXI GCAGC 3 cut(s) 201, 1273, 1555
BseYI CCCAGC 1 cut(s) 1387
BsgI GTGCAG 1 cut(s) 1423
BshFI GGCC 5 cut(s) 5, 38, 136, 275, 1436
BshNI GGYRCC 1 cut(s) 87
BsiHKAI GWGCWC 2 cut(s) 994, 1465
BsiSI CCGG 1 cut(s) 35
BslFI GGGAC 1 cut(s) 352
BslI CCNNNNNNNGG 3 cut(s) 599, 915, 1393
BsmAI GTCTC 2 cut(s) 1105, 1560
BsmFI GGGAC 1 cut(s) 352
BsmI GAATGC 2 cut(s) 142, 1273
BsnI GGCC 5 cut(s) 5, 38, 136, 275, 1436
Bsp119I TTCGAA 2 cut(s) 146, 209
Bsp1286I GDGCHC 3 cut(s) 994, 1250, 1465
Bsp143I GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
Bsp19I CCATGG 2 cut(s) 559, 1633
BspACI CCGC 3 cut(s) 632, 1273, 1280
BspANI GGCC 5 cut(s) 5, 38, 136, 275, 1436
BspCNI CTCAG 6 cut(s) 40, 1128, 1435, 1477, 1541, 1570
BspHI TCATGA 1 cut(s) 805
BspLI GGNNCC 5 cut(s) 89, 165, 201, 240, 460
BspMI ACCTGC 2 cut(s) 475, 529
BspPI GGATC 7 cut(s) 158, 171, 441, 453, 466, 739, 858
BspT104I TTCGAA 2 cut(s) 146, 209
BspT107I GGYRCC 1 cut(s) 87
BspTI CTTAAG 1 cut(s) 1141
BsrDI GCAATG 2 cut(s) 352, 658
BsrI ACTGG 2 cut(s) 203, 309
BssECI CCNNGG 8 cut(s) 137, 416, 463, 559, 718, 898, 1294, 1633
BssMI GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
BssT1I CCWWGG 3 cut(s) 559, 718, 1633
Bst2UI CCWGG 2 cut(s) 1019, 1101
Bst4CI ACNGT 3 cut(s) 871, 895, 1490
Bst6I CTCTTC 2 cut(s) 471, 1221
BstAFI CTTAAG 1 cut(s) 1141
BstAPI GCANNNNNTGC 3 cut(s) 704, 1437, 1446
BstBI TTCGAA 2 cut(s) 146, 209
BstC8I GCNNGC 5 cut(s) 134, 1273, 1277, 1438, 1442
BstDEI CTNAG 8 cut(s) 48, 514, 830, 1115, 1422, 1464, 1528, 1557
BstDSI CCRYGG 5 cut(s) 137, 463, 559, 898, 1633
BstEII GGTNACC 1 cut(s) 902
BstF5I GGATG 6 cut(s) 160, 334, 710, 1109, 1414, 1586
BstKTI GATC 8 cut(s) 166, 226, 436, 461, 734, 853, 881, 937
BstMAI GTCTC 2 cut(s) 1105, 1560
BstMBI GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
BstMWI GCNNNNNNNGC 4 cut(s) 704, 1437, 1446, 1629
BstNI CCWGG 2 cut(s) 1019, 1101
BstPI GGTNACC 1 cut(s) 902
BstSCI CCNGG 2 cut(s) 1017, 1099
BstSLI GKGCMC 1 cut(s) 1250
BstV1I GCAGC 3 cut(s) 201, 1273, 1555
BstX2I RGATCY 4 cut(s) 163, 458, 850, 878
BstYI RGATCY 4 cut(s) 163, 458, 850, 878
BsuI GTATCC 1 cut(s) 1564
BsuRI GGCC 5 cut(s) 5, 38, 136, 275, 1436
BtgI CCRYGG 5 cut(s) 137, 463, 559, 898, 1633
BtsCI GGATG 6 cut(s) 160, 334, 710, 1109, 1414, 1586
BtsIMutI CAGTG 3 cut(s) 1248, 1472, 1495
BveI ACCTGC 2 cut(s) 475, 529
Cac8I GCNNGC 5 cut(s) 134, 1273, 1277, 1438, 1442
CaiI CAGNNNCTG 1 cut(s) 1437
CciI TCATGA 1 cut(s) 805
Cfr13I GGNCC 3 cut(s) 37, 238, 1434
Csp6I GTAC 5 cut(s) 88, 261, 845, 1097, 1107
CviAII CATG 6 cut(s) 250, 560, 599, 806, 1607, 1634
CviQI GTAC 5 cut(s) 88, 261, 845, 1097, 1107
DdeI CTNAG 8 cut(s) 48, 514, 830, 1115, 1422, 1464, 1528, 1557
DpnI GATC 8 cut(s) 165, 225, 435, 460, 733, 852, 880, 936
DpnII GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
EaeI YGGCCR 1 cut(s) 273
Eam1104I CTCTTC 2 cut(s) 471, 1221
EarI CTCTTC 2 cut(s) 471, 1221
Ecl136II GAGCTC 1 cut(s) 992
Eco130I CCWWGG 3 cut(s) 559, 718, 1633
Eco24I GRGCYC 1 cut(s) 994
Eco47I GGWCC 1 cut(s) 238
Eco53kI GAGCTC 1 cut(s) 992
Eco57I CTGAAG 1 cut(s) 1073
Eco91I GGTNACC 1 cut(s) 902
EcoICRI GAGCTC 1 cut(s) 992
EcoO109I RGGNCCY 1 cut(s) 1434
EcoO65I GGTNACC 1 cut(s) 902
EcoRI GAATTC 1 cut(s) 659
EcoRII CCWGG 2 cut(s) 1017, 1099
EcoT14I CCWWGG 3 cut(s) 559, 718, 1633
EcoT22I ATGCAT 3 cut(s) 700, 709, 1451
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 3 cut(s) 559, 718, 1633
FaeI CATG 6 cut(s) 253, 563, 602, 809, 1610, 1637
FalI AAGNNNNNCTT 4 cut(s) 250, 282, 1268, 1300
FaqI GGGAC 1 cut(s) 352
FatI CATG 6 cut(s) 249, 559, 598, 805, 1606, 1633
FauI CCCGC 1 cut(s) 1280
Fnu4HI GCNGC 4 cut(s) 190, 1262, 1280, 1544
FokI GGATG 6 cut(s) 167, 341, 697, 1116, 1401, 1573
FriOI GRGCYC 1 cut(s) 994
Fsp4HI GCNGC 4 cut(s) 190, 1262, 1280, 1544
FspBI CTAG 2 cut(s) 1353, 1639
GluI GCNGC 4 cut(s) 190, 1262, 1280, 1544
GsaI CCCAGC 1 cut(s) 1391
GsuI CTGGAG 2 cut(s) 311, 1535
HaeIII GGCC 5 cut(s) 5, 38, 136, 275, 1436
HapII CCGG 1 cut(s) 35
Hin1II CATG 6 cut(s) 253, 563, 602, 809, 1610, 1637
HincII GTYRAC 1 cut(s) 547
HindII GTYRAC 1 cut(s) 547
HindIII AAGCTT 1 cut(s) 1079
HinfI GANTC 6 cut(s) 76, 148, 402, 641, 1113, 1615
HpaII CCGG 1 cut(s) 35
HphI GGTGA 7 cut(s) 57, 499, 668, 704, 734, 914, 1283
Hpy166II GTNNAC 2 cut(s) 547, 1097
Hpy188I TCNGA 8 cut(s) 49, 109, 238, 420, 703, 1032, 1053, 1531
Hpy188III TCNNGA 7 cut(s) 152, 406, 473, 584, 806, 1514, 1559
Hpy8I GTNNAC 2 cut(s) 547, 1097
HpyAV CCTTC 3 cut(s) 243, 676, 724
HpyCH4III ACNGT 3 cut(s) 871, 895, 1490
HpyF10VI GCNNNNNNNGC 4 cut(s) 704, 1437, 1446, 1629
HpyF3I CTNAG 8 cut(s) 48, 514, 830, 1115, 1422, 1464, 1528, 1557
Hsp92II CATG 6 cut(s) 253, 563, 602, 809, 1610, 1637
KpnI GGTACC 1 cut(s) 91
Kzo9I GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
LmnI GCTCC 3 cut(s) 199, 812, 1411
Lsp1109I GCAGC 3 cut(s) 201, 1273, 1555
LweI GCATC 6 cut(s) 685, 694, 707, 716, 1346, 1423
MaeI CTAG 2 cut(s) 1353, 1639
MaeIII GTNAC 6 cut(s) 63, 470, 491, 902, 1207, 1328
MalI GATC 8 cut(s) 165, 225, 435, 460, 733, 852, 880, 936
MboI GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
MboII GAAGA 4 cut(s) 488, 962, 1045, 1238
MfeI CAATTG 1 cut(s) 977
MflI RGATCY 4 cut(s) 163, 458, 850, 878
MhlI GDGCHC 3 cut(s) 994, 1250, 1465
MlyI GAGTC 1 cut(s) 1107
MmeI TCCRAC 4 cut(s) 769, 1442, 1517, 1614
Mph1103I ATGCAT 3 cut(s) 700, 709, 1451
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 3 cut(s) 1142, 1152, 1482
MspCI CTTAAG 1 cut(s) 1141
MspI CCGG 1 cut(s) 35
MspR9I CCNGG 2 cut(s) 1019, 1101
MunI CAATTG 1 cut(s) 977
Mva1269I GAATGC 2 cut(s) 142, 1273
MvaI CCWGG 2 cut(s) 1019, 1101
MwoI GCNNNNNNNGC 4 cut(s) 704, 1437, 1446, 1629
NcoI CCATGG 2 cut(s) 559, 1633
NdeII GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
NlaIII CATG 6 cut(s) 253, 563, 602, 809, 1610, 1637
NlaIV GGNNCC 5 cut(s) 89, 165, 201, 240, 460
NmuCI GTSAC 6 cut(s) 63, 470, 491, 902, 1207, 1328
NsiI ATGCAT 3 cut(s) 700, 709, 1451
NspV TTCGAA 2 cut(s) 146, 209
PagI TCATGA 1 cut(s) 805
PaqCI CACCTGC 1 cut(s) 475
PctI GAATGC 2 cut(s) 142, 1273
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 5 cut(s) 76, 148, 402, 641, 1615
PkrI GCNGC 4 cut(s) 191, 1263, 1281, 1545
PleI GAGTC 1 cut(s) 1107
PpsI GAGTC 1 cut(s) 1107
Psp124BI GAGCTC 1 cut(s) 994
Psp6I CCWGG 2 cut(s) 1017, 1099
PspEI GGTNACC 1 cut(s) 902
PspFI CCCAGC 1 cut(s) 1387
PspGI CCWGG 2 cut(s) 1017, 1099
PspN4I GGNNCC 5 cut(s) 89, 165, 201, 240, 460
PspPI GGNCC 3 cut(s) 37, 238, 1434
PstNI CAGNNNCTG 1 cut(s) 1437
PsuI RGATCY 4 cut(s) 163, 458, 850, 878
RsaI GTAC 5 cut(s) 89, 262, 846, 1098, 1108
RsaNI GTAC 5 cut(s) 88, 261, 845, 1097, 1107
SacI GAGCTC 1 cut(s) 994
SaqAI TTAA 3 cut(s) 1142, 1152, 1482
SatI GCNGC 4 cut(s) 190, 1262, 1280, 1544
Sau3AI GATC 8 cut(s) 163, 223, 433, 458, 731, 850, 878, 934
Sau96I GGNCC 3 cut(s) 37, 238, 1434
SchI GAGTC 1 cut(s) 1107
ScrFI CCNGG 2 cut(s) 1019, 1101
SduI GDGCHC 3 cut(s) 994, 1250, 1465
SfaNI GCATC 6 cut(s) 685, 694, 707, 716, 1346, 1423
SfuI TTCGAA 2 cut(s) 146, 209
SinI GGWCC 1 cut(s) 238
SmlI CTYRAG 5 cut(s) 993, 1012, 1141, 1366, 1550
SmoI CTYRAG 5 cut(s) 993, 1012, 1141, 1366, 1550
SsiI CCGC 3 cut(s) 632, 1273, 1280
SspI AATATT 1 cut(s) 424
SspMI CTAG 2 cut(s) 1353, 1639
SstI GAGCTC 1 cut(s) 994
StyD4I CCNGG 2 cut(s) 1017, 1099
StyI CCWWGG 3 cut(s) 559, 718, 1633
TaaI ACNGT 3 cut(s) 871, 895, 1490
TaqI TCGA 4 cut(s) 22, 146, 209, 503
TauI GCSGC 1 cut(s) 1282
TfiI GAWTC 5 cut(s) 76, 148, 402, 641, 1615
Tru1I TTAA 3 cut(s) 1142, 1152, 1482
Tru9I TTAA 3 cut(s) 1142, 1152, 1482
TscAI CASTG 3 cut(s) 1255, 1472, 1495
TseFI GTSAC 6 cut(s) 63, 470, 491, 902, 1207, 1328
TseI GCWGC 3 cut(s) 189, 1261, 1543
Tsp45I GTSAC 6 cut(s) 63, 470, 491, 902, 1207, 1328
TspDTI ATGAA 4 cut(s) 372, 633, 978, 1623
TspGWI ACGGA 1 cut(s) 887
TspRI CASTG 3 cut(s) 1255, 1472, 1495
Vha464I CTTAAG 1 cut(s) 1141
VpaK11BI GGWCC 1 cut(s) 238
XapI RAATTY 6 cut(s) 10, 659, 725, 1000, 1235, 1344
XcmI CCANNNNNNNNNTGG 1 cut(s) 725
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 2 cut(s) 1353, 1639
Zsp2I ATGCAT 3 cut(s) 700, 709, 1451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.