f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26000 |
| fragaria_vesca | FvH4_4g24590 |
| malus_domestica | MD13G1110000.v1.1 MD16G1109900.v1.1 |
| prunus_persica | Prupe.1G234900_v2.0.a1 |
| pyrus_communis | pycom13g09570 pycom16g09340 |
| rosa_chinensis | RchiOBHm_Chr4g0431591 |
| rosa_laevigata | RLG00000006905 |
| rosa_multiflora | Rmu_sc0008423.1_g000001 Rmu_sc0035802.1_g000001 Rmu_sc0035803.1_g000001 Rmu_ssc0000203.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00373050 |
| rosa_rugosa | Rorug04G0251100 |
| rosa_samantha | Rh4AG307800 Rh4BG315400 Rh4CG330900 Rh4DG310300 |
| rosa_wichuraiana | Rw4G026680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 87 |
| AccB1I | GGYRCC | 1 cut(s) | 87 |
| AccI | GTMKAC | 1 cut(s) | 1480 |
| AccII | CGCG | 1 cut(s) | 747 |
| AciI | CCGC | 2 cut(s) | 636, 747 |
| AclI | AACGTT | 1 cut(s) | 1355 |
| AclWI | GGATC | 6 cut(s) | 206, 219, 538, 705, 746, 890 |
| AcsI | RAATTY | 3 cut(s) | 10, 388, 559 |
| AcuI | CTGAAG | 1 cut(s) | 920 |
| AdeI | CACNNNGTG | 1 cut(s) | 1019 |
| AfaI | GTAC | 3 cut(s) | 89, 274, 955 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 97, 762, 1243 |
| AflII | CTTAAG | 1 cut(s) | 1400 |
| AgsI | TTSAA | 9 cut(s) | 10, 147, 388, 559, 914, 1000, 1073, 1081, 1193 |
| AjnI | CCWGG | 5 cut(s) | 417, 427, 864, 923, 946 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1073, 1105 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1417, 1449 |
| AluBI | AGCT | 4 cut(s) | 650, 858, 987, 1396 |
| AluI | AGCT | 4 cut(s) | 650, 858, 987, 1396 |
| Alw21I | GWGCWC | 2 cut(s) | 485, 652 |
| Alw26I | GTCTC | 2 cut(s) | 1406, 1410 |
| AlwI | GGATC | 6 cut(s) | 206, 219, 538, 705, 746, 890 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1216, 1287 |
| AoxI | GGCC | 4 cut(s) | 3, 134, 1161, 1284 |
| ApeKI | GCWGC | 2 cut(s) | 1111, 1393 |
| ApoI | RAATTY | 3 cut(s) | 10, 388, 559 |
| AseI | ATTAAT | 1 cut(s) | 1332 |
| Asp718I | GGTACC | 1 cut(s) | 87 |
| AspLEI | GCGC | 1 cut(s) | 1013 |
| AspS9I | GGNCC | 4 cut(s) | 250, 607, 1284, 1433 |
| AsuC2I | CCSGG | 1 cut(s) | 36 |
| AsuHPI | GGTGA | 3 cut(s) | 11, 650, 761 |
| AsuII | TTCGAA | 1 cut(s) | 221 |
| AsuNHI | GCTAGC | 1 cut(s) | 928 |
| AvaII | GGWCC | 3 cut(s) | 250, 607, 1433 |
| AxyI | CCTNAGG | 1 cut(s) | 1217 |
| BaeGI | GKGCMC | 2 cut(s) | 878, 1202 |
| BamHI | GGATCC | 1 cut(s) | 211 |
| BanI | GGYRCC | 1 cut(s) | 87 |
| BanII | GRGCYC | 2 cut(s) | 652, 841 |
| Bbv12I | GWGCWC | 2 cut(s) | 485, 652 |
| BbvCI | CCTCAGC | 1 cut(s) | 1242 |
| BbvI | GCAGC | 2 cut(s) | 1123, 1405 |
| BccI | CCATC | 7 cut(s) | 116, 155, 614, 635, 887, 1094, 1415 |
| BceAI | ACGGC | 2 cut(s) | 121, 300 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 131, 165 |
| BciT130I | CCWGG | 5 cut(s) | 419, 429, 866, 925, 948 |
| BcnI | CCSGG | 1 cut(s) | 36 |
| BcoDI | GTCTC | 2 cut(s) | 1406, 1410 |
| BfaI | CTAG | 3 cut(s) | 929, 957, 1489 |
| BfmI | CTRYAG | 3 cut(s) | 322, 738, 851 |
| BfrI | CTTAAG | 1 cut(s) | 1400 |
| BglII | AGATCT | 1 cut(s) | 725 |
| BisI | GCNGC | 2 cut(s) | 1112, 1394 |
| BlsI | GCNGC | 2 cut(s) | 1113, 1395 |
| Bme1390I | CCNGG | 6 cut(s) | 36, 419, 429, 866, 925, 948 |
| Bme18I | GGWCC | 3 cut(s) | 250, 607, 1433 |
| BmgT120I | GGNCC | 4 cut(s) | 250, 607, 1284, 1433 |
| BmiI | GGNNCC | 5 cut(s) | 89, 213, 252, 1426, 1435 |
| BmrFI | CCNGG | 6 cut(s) | 36, 419, 429, 866, 925, 948 |
| BmsI | GCATC | 3 cut(s) | 49, 1098, 1196 |
| BmtI | GCTAGC | 1 cut(s) | 932 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1242 |
| Bpu14I | TTCGAA | 1 cut(s) | 221 |
| BpuEI | CTTGAG | 4 cut(s) | 323, 825, 880, 1392 |
| BpuMI | CCSGG | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 6 cut(s) | 35, 137, 428, 878, 923, 1005 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1421, 1451 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 97, 762, 1243 |
| Bse1I | ACTGG | 1 cut(s) | 465 |
| Bse21I | CCTNAGG | 1 cut(s) | 1217 |
| Bse3DI | GCAATG | 1 cut(s) | 574 |
| BseBI | CCWGG | 5 cut(s) | 419, 429, 866, 925, 948 |
| BseDI | CCNNGG | 6 cut(s) | 35, 137, 428, 878, 923, 1005 |
| BseGI | GGATG | 5 cut(s) | 166, 346, 956, 1264, 1426 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 97, 762, 1243 |
| BseMI | GCAATG | 1 cut(s) | 574 |
| BseMII | CTCAG | 6 cut(s) | 39, 976, 1208, 1233, 1286, 1392 |
| BseNI | ACTGG | 1 cut(s) | 465 |
| BseRI | GAGGAG | 2 cut(s) | 642, 660 |
| BseSI | GKGCMC | 2 cut(s) | 878, 1202 |
| BseXI | GCAGC | 2 cut(s) | 1123, 1405 |
| BsgI | GTGCAG | 2 cut(s) | 713, 1273 |
| Bsh1236I | CGCG | 1 cut(s) | 747 |
| BshFI | GGCC | 4 cut(s) | 5, 136, 1163, 1286 |
| BshNI | GGYRCC | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 2 cut(s) | 485, 652 |
| BsiSI | CCGG | 1 cut(s) | 35 |
| BslFI | GGGAC | 2 cut(s) | 364, 1419 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 97, 762, 1243 |
| BsmAI | GTCTC | 2 cut(s) | 1406, 1410 |
| BsmFI | GGGAC | 2 cut(s) | 364, 1419 |
| BsmI | GAATGC | 1 cut(s) | 142 |
| BsnI | GGCC | 4 cut(s) | 5, 136, 1163, 1286 |
| Bsp119I | TTCGAA | 1 cut(s) | 221 |
| Bsp1286I | GDGCHC | 5 cut(s) | 485, 652, 841, 878, 1202 |
| Bsp143I | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| BspACI | CCGC | 2 cut(s) | 636, 747 |
| BspANI | GGCC | 4 cut(s) | 5, 136, 1163, 1286 |
| BspCNI | CTCAG | 6 cut(s) | 40, 975, 1209, 1234, 1285, 1391 |
| BspFNI | CGCG | 1 cut(s) | 747 |
| BspLI | GGNNCC | 5 cut(s) | 89, 213, 252, 1426, 1435 |
| BspMAI | CTGCAG | 1 cut(s) | 855 |
| BspOI | GCTAGC | 1 cut(s) | 932 |
| BspPI | GGATC | 6 cut(s) | 206, 219, 538, 705, 746, 890 |
| BspT104I | TTCGAA | 1 cut(s) | 221 |
| BspT107I | GGYRCC | 1 cut(s) | 87 |
| BspTI | CTTAAG | 1 cut(s) | 1400 |
| BsrDI | GCAATG | 1 cut(s) | 574 |
| BsrI | ACTGG | 1 cut(s) | 465 |
| BssECI | CCNNGG | 6 cut(s) | 35, 137, 428, 878, 923, 1005 |
| BssMI | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| BssT1I | CCWWGG | 2 cut(s) | 878, 1005 |
| Bst2UI | CCWGG | 5 cut(s) | 419, 429, 866, 925, 948 |
| Bst4CI | ACNGT | 5 cut(s) | 326, 362, 521, 742, 1433 |
| Bst6I | CTCTTC | 2 cut(s) | 175, 1068 |
| BstAFI | CTTAAG | 1 cut(s) | 1400 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1287, 1296 |
| BstBI | TTCGAA | 1 cut(s) | 221 |
| BstC8I | GCNNGC | 5 cut(s) | 299, 930, 944, 1127, 1288 |
| BstDEI | CTNAG | 8 cut(s) | 48, 677, 962, 1217, 1242, 1272, 1378, 1475 |
| BstDSI | CCRYGG | 1 cut(s) | 137 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 95 |
| BstF5I | GGATG | 5 cut(s) | 166, 346, 956, 1264, 1426 |
| BstFNI | CGCG | 1 cut(s) | 747 |
| BstHHI | GCGC | 1 cut(s) | 1013 |
| BstKTI | GATC | 9 cut(s) | 214, 238, 448, 533, 700, 728, 754, 784, 885 |
| BstMAI | GTCTC | 2 cut(s) | 1406, 1410 |
| BstMBI | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1111, 1206, 1287, 1296 |
| BstNI | CCWGG | 5 cut(s) | 419, 429, 866, 925, 948 |
| BstNSI | RCATGY | 1 cut(s) | 540 |
| BstSCI | CCNGG | 6 cut(s) | 34, 417, 427, 864, 923, 946 |
| BstSFI | CTRYAG | 3 cut(s) | 322, 738, 851 |
| BstSLI | GKGCMC | 2 cut(s) | 878, 1202 |
| BstUI | CGCG | 1 cut(s) | 747 |
| BstV1I | GCAGC | 2 cut(s) | 1123, 1405 |
| BstX2I | RGATCY | 3 cut(s) | 211, 697, 725 |
| BstYI | RGATCY | 3 cut(s) | 211, 697, 725 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1217 |
| BsuRI | GGCC | 4 cut(s) | 5, 136, 1163, 1286 |
| BtgI | CCRYGG | 1 cut(s) | 137 |
| BtgZI | GCGATG | 1 cut(s) | 633 |
| BtsCI | GGATG | 5 cut(s) | 166, 346, 956, 1264, 1426 |
| BtsIMutI | CAGTG | 5 cut(s) | 331, 472, 526, 788, 885 |
| Cac8I | GCNNGC | 5 cut(s) | 299, 930, 944, 1127, 1288 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1216, 1287 |
| CfoI | GCGC | 1 cut(s) | 1013 |
| Cfr13I | GGNCC | 4 cut(s) | 250, 607, 1284, 1433 |
| Csp6I | GTAC | 3 cut(s) | 88, 273, 954 |
| CviAII | CATG | 6 cut(s) | 262, 537, 614, 656, 1457, 1484 |
| CviQI | GTAC | 3 cut(s) | 88, 273, 954 |
| DdeI | CTNAG | 8 cut(s) | 48, 677, 962, 1217, 1242, 1272, 1378, 1475 |
| DpnI | GATC | 9 cut(s) | 213, 237, 447, 532, 699, 727, 753, 783, 884 |
| DpnII | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| DraIII | CACNNNGTG | 1 cut(s) | 1019 |
| Eam1104I | CTCTTC | 2 cut(s) | 175, 1068 |
| EarI | CTCTTC | 2 cut(s) | 175, 1068 |
| Ecl136II | GAGCTC | 1 cut(s) | 650 |
| Eco130I | CCWWGG | 2 cut(s) | 878, 1005 |
| Eco24I | GRGCYC | 2 cut(s) | 652, 841 |
| Eco47I | GGWCC | 3 cut(s) | 250, 607, 1433 |
| Eco53kI | GAGCTC | 1 cut(s) | 650 |
| Eco57I | CTGAAG | 1 cut(s) | 920 |
| Eco81I | CCTNAGG | 1 cut(s) | 1217 |
| EcoICRI | GAGCTC | 1 cut(s) | 650 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 95 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1284 |
| EcoRII | CCWGG | 5 cut(s) | 417, 427, 864, 923, 946 |
| EcoT14I | CCWWGG | 2 cut(s) | 878, 1005 |
| EcoT38I | GRGCYC | 2 cut(s) | 652, 841 |
| ErhI | CCWWGG | 2 cut(s) | 878, 1005 |
| FaeI | CATG | 6 cut(s) | 265, 540, 617, 659, 1460, 1487 |
| FaqI | GGGAC | 2 cut(s) | 364, 1419 |
| FatI | CATG | 6 cut(s) | 261, 536, 613, 655, 1456, 1483 |
| FblI | GTMKAC | 1 cut(s) | 1480 |
| Fnu4HI | GCNGC | 2 cut(s) | 1112, 1394 |
| FokI | GGATG | 5 cut(s) | 173, 353, 963, 1251, 1433 |
| FriOI | GRGCYC | 2 cut(s) | 652, 841 |
| Fsp4HI | GCNGC | 2 cut(s) | 1112, 1394 |
| FspBI | CTAG | 3 cut(s) | 929, 957, 1489 |
| GlaI | GCGC | 1 cut(s) | 1012 |
| GluI | GCNGC | 2 cut(s) | 1112, 1394 |
| HaeIII | GGCC | 4 cut(s) | 5, 136, 1163, 1286 |
| HapII | CCGG | 1 cut(s) | 35 |
| HhaI | GCGC | 1 cut(s) | 1013 |
| Hin1II | CATG | 6 cut(s) | 265, 540, 617, 659, 1460, 1487 |
| Hin6I | GCGC | 1 cut(s) | 1011 |
| HinP1I | GCGC | 1 cut(s) | 1011 |
| HincII | GTYRAC | 1 cut(s) | 1481 |
| HindII | GTYRAC | 1 cut(s) | 1481 |
| HinfI | GANTC | 4 cut(s) | 471, 506, 960, 1044 |
| HpaII | CCGG | 1 cut(s) | 35 |
| HphI | GGTGA | 3 cut(s) | 11, 650, 761 |
| Hpy166II | GTNNAC | 4 cut(s) | 282, 319, 1043, 1481 |
| Hpy188I | TCNGA | 5 cut(s) | 49, 250, 900, 1168, 1381 |
| Hpy188III | TCNNGA | 4 cut(s) | 152, 233, 397, 1409 |
| Hpy8I | GTNNAC | 4 cut(s) | 282, 319, 1043, 1481 |
| HpyAV | CCTTC | 5 cut(s) | 255, 330, 487, 707, 1455 |
| HpyCH4III | ACNGT | 5 cut(s) | 326, 362, 521, 742, 1433 |
| HpyCH4IV | ACGT | 3 cut(s) | 278, 552, 1355 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1111, 1206, 1287, 1296 |
| HpyF3I | CTNAG | 8 cut(s) | 48, 677, 962, 1217, 1242, 1272, 1378, 1475 |
| HpySE526I | ACGT | 3 cut(s) | 278, 552, 1355 |
| Hsp92II | CATG | 6 cut(s) | 265, 540, 617, 659, 1460, 1487 |
| HspAI | GCGC | 1 cut(s) | 1011 |
| KpnI | GGTACC | 1 cut(s) | 91 |
| Kzo9I | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| LmnI | GCTCC | 2 cut(s) | 647, 655 |
| Lsp1109I | GCAGC | 2 cut(s) | 1123, 1405 |
| LweI | GCATC | 3 cut(s) | 49, 1098, 1196 |
| MaeI | CTAG | 3 cut(s) | 929, 957, 1489 |
| MaeII | ACGT | 3 cut(s) | 278, 552, 1355 |
| MaeIII | GTNAC | 4 cut(s) | 329, 356, 1054, 1178 |
| MalI | GATC | 9 cut(s) | 213, 237, 447, 532, 699, 727, 753, 783, 884 |
| MboI | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| MboII | GAAGA | 4 cut(s) | 192, 692, 811, 1085 |
| MflI | RGATCY | 3 cut(s) | 211, 697, 725 |
| MhlI | GDGCHC | 5 cut(s) | 485, 652, 841, 878, 1202 |
| MluCI | AATT | 8 cut(s) | 10, 55, 364, 388, 559, 824, 1000, 1035 |
| MlyI | GAGTC | 2 cut(s) | 954, 1038 |
| MmeI | TCCRAC | 2 cut(s) | 1292, 1367 |
| MseI | TTAA | 4 cut(s) | 827, 989, 1332, 1401 |
| MslI | CAYNNNNRTG | 1 cut(s) | 618 |
| MspCI | CTTAAG | 1 cut(s) | 1400 |
| MspI | CCGG | 1 cut(s) | 35 |
| MspR9I | CCNGG | 6 cut(s) | 36, 419, 429, 866, 925, 948 |
| Mva1269I | GAATGC | 1 cut(s) | 142 |
| MvaI | CCWGG | 5 cut(s) | 419, 429, 866, 925, 948 |
| MvnI | CGCG | 1 cut(s) | 747 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1111, 1206, 1287, 1296 |
| NciI | CCSGG | 1 cut(s) | 36 |
| NdeII | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| NheI | GCTAGC | 1 cut(s) | 928 |
| NlaIII | CATG | 6 cut(s) | 265, 540, 617, 659, 1460, 1487 |
| NlaIV | GGNNCC | 5 cut(s) | 89, 213, 252, 1426, 1435 |
| NmuCI | GTSAC | 2 cut(s) | 1054, 1178 |
| NspI | RCATGY | 1 cut(s) | 540 |
| NspV | TTCGAA | 1 cut(s) | 221 |
| PctI | GAATGC | 1 cut(s) | 142 |
| PfeI | GAWTC | 2 cut(s) | 471, 506 |
| PkrI | GCNGC | 2 cut(s) | 1113, 1395 |
| PleI | GAGTC | 2 cut(s) | 954, 1038 |
| PpsI | GAGTC | 2 cut(s) | 954, 1038 |
| PshBI | ATTAAT | 1 cut(s) | 1332 |
| Psp124BI | GAGCTC | 1 cut(s) | 652 |
| Psp1406I | AACGTT | 1 cut(s) | 1355 |
| Psp6I | CCWGG | 5 cut(s) | 417, 427, 864, 923, 946 |
| PspGI | CCWGG | 5 cut(s) | 417, 427, 864, 923, 946 |
| PspN4I | GGNNCC | 5 cut(s) | 89, 213, 252, 1426, 1435 |
| PspPI | GGNCC | 4 cut(s) | 250, 607, 1284, 1433 |
| PstI | CTGCAG | 1 cut(s) | 855 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1216, 1287 |
| PsuI | RGATCY | 3 cut(s) | 211, 697, 725 |
| RsaI | GTAC | 3 cut(s) | 89, 274, 955 |
| RsaNI | GTAC | 3 cut(s) | 88, 273, 954 |
| RseI | CAYNNNNRTG | 1 cut(s) | 618 |
| SacI | GAGCTC | 1 cut(s) | 652 |
| SalI | GTCGAC | 1 cut(s) | 1479 |
| SaqAI | TTAA | 4 cut(s) | 827, 989, 1332, 1401 |
| SatI | GCNGC | 2 cut(s) | 1112, 1394 |
| Sau3AI | GATC | 9 cut(s) | 211, 235, 445, 530, 697, 725, 751, 781, 882 |
| Sau96I | GGNCC | 4 cut(s) | 250, 607, 1284, 1433 |
| SchI | GAGTC | 2 cut(s) | 954, 1038 |
| ScrFI | CCNGG | 6 cut(s) | 36, 419, 429, 866, 925, 948 |
| SduI | GDGCHC | 5 cut(s) | 485, 652, 841, 878, 1202 |
| SfaNI | GCATC | 3 cut(s) | 49, 1098, 1196 |
| SfcI | CTRYAG | 3 cut(s) | 322, 738, 851 |
| SfuI | TTCGAA | 1 cut(s) | 221 |
| SinI | GGWCC | 3 cut(s) | 250, 607, 1433 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 618 |
| SmlI | CTYRAG | 5 cut(s) | 302, 840, 859, 1400, 1407 |
| SmoI | CTYRAG | 5 cut(s) | 302, 840, 859, 1400, 1407 |
| Sse9I | AATT | 8 cut(s) | 10, 55, 364, 388, 559, 824, 1000, 1035 |
| SsiI | CCGC | 2 cut(s) | 636, 747 |
| SspI | AATATT | 2 cut(s) | 436, 772 |
| SspMI | CTAG | 3 cut(s) | 929, 957, 1489 |
| SstI | GAGCTC | 1 cut(s) | 652 |
| StyD4I | CCNGG | 6 cut(s) | 34, 417, 427, 864, 923, 946 |
| StyI | CCWWGG | 2 cut(s) | 878, 1005 |
| TaaI | ACNGT | 5 cut(s) | 326, 362, 521, 742, 1433 |
| TaiI | ACGT | 3 cut(s) | 281, 555, 1358 |
| TaqI | TCGA | 5 cut(s) | 151, 221, 444, 1204, 1480 |
| TasI | AATT | 8 cut(s) | 10, 55, 364, 388, 559, 824, 1000, 1035 |
| TatI | WGTACW | 1 cut(s) | 953 |
| TfiI | GAWTC | 2 cut(s) | 471, 506 |
| Tru1I | TTAA | 4 cut(s) | 827, 989, 1332, 1401 |
| Tru9I | TTAA | 4 cut(s) | 827, 989, 1332, 1401 |
| TscAI | CASTG | 5 cut(s) | 331, 472, 526, 795, 892 |
| TseFI | GTSAC | 2 cut(s) | 1054, 1178 |
| TseI | GCWGC | 2 cut(s) | 1111, 1393 |
| Tsp45I | GTSAC | 2 cut(s) | 1054, 1178 |
| TspDTI | ATGAA | 4 cut(s) | 384, 425, 585, 1473 |
| TspGWI | ACGGA | 1 cut(s) | 1477 |
| TspRI | CASTG | 5 cut(s) | 331, 472, 526, 795, 892 |
| Vha464I | CTTAAG | 1 cut(s) | 1400 |
| VpaK11BI | GGWCC | 3 cut(s) | 250, 607, 1433 |
| VspI | ATTAAT | 1 cut(s) | 1332 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 95 |
| XapI | RAATTY | 3 cut(s) | 10, 388, 559 |
| XceI | RCATGY | 1 cut(s) | 540 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 617 |
| XmiI | GTMKAC | 1 cut(s) | 1480 |
| XspI | CTAG | 3 cut(s) | 929, 957, 1489 |