Prupe.1G234900_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
24884149 .. 24888664
4516 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G234900.1

Sequence Viewer

Length: 1482 bp
ATGGCCTTGAATTTTTCTTATCGACCAATCTTTCCCGGACATCTGTCTGAGGACAATTTGGTTTCACCAATGAGGATTGCCAATGGGTACCTCGTGGAGGGTATGCCAGAAAGGAATGGAGATGGTTTCGGTAGGCCATGGCATTCGAACAGGCAAGTGGAAGATTTCTTTGATAGATGTGATAGGGGTGGCTTACAGGACCCAGTTTCAAATGACATTCTTGATCTTTTGCCTTCGGACCCATTCGGCATGGATATGAGTACCACGTTTACGGCGATATCGGGCTGGCTTGAGGATTTGGAAGTGGACTATGGTGGTTACGGAAGGCACCATGTGGGGACAAGTAATGGTAATTATGAACTTTTTGCAGGATTGAATTTTTTTTGGAATAATGCTATGAGGTTCCACGCTTTCCCTGGGAATATTGGGGTTGATCACAAGTCTAATGTAGCAAATGGATTTGCTGGGTGTTCAAAAGAGAAGGGAGTTGGTGATGCTTCCTGCCACGGTGGTTTCGGATCAGCTTGTGCAGTGGCTGACATTTTGAATTTTGGCAACGAAAGTTGTGGGTTTTCCAATCAGAAAAATGTAGAGTTTCAGGATGGAAATGGGATTTTAACTGATGAAGATGGAGATGGAGGAACTCCTCCTTGTGCTTTGATGTTTGCCCTTGGTTATCTGGGTGTACGGGATCTCTTTGTTGTAGAAAAAGTTTGCAGGTCTCTCCGTTCAACTGTTCACGGTGACCCCCTTTTGTGGAGAAGTATTCACATAGATCAACCATTGAATGAGAAGATTACCGATGATATTCTTTTGCAGTTAACGAACAGGGCTCAAGGAAGTCTGCAGTGCTTGAGCCTGGTGGAGTGCTCTAAGATCACTGATGATGGTCTGAAGCGTGTGCTTGAAAGTAATCCTAGGCTAGCCAAGTTGAGTGTGCCTGGGTGTACTAAACTCAGTATTGAGGGCATCGTGAATAACTTAAAGGCTTTCAAGTCTAAGGGTGCACAAGATCTGAAGCATTTACGAATTGGTGGACTCTATGGTGTGACACAGCAGCATTTTGAAGAGCTGAAATTTTTGTTGGGCACTGATAGCCAAATGAAGCAGAATCCCCGAAAGCTGCATTTTTATCACAGAGGGAACTTTTATCTGCCCAATGATGATGATAGCGACATTGATATTGAAATGTGCCCTAGATGTCAGAACCTGAGGCTGGTTTATGATTGCCCTGCTGAGGTTTGTCCAGGGAAAAGACATCCAACTCAGGTATGCAGGGCTTGCACACTTTGCATAGGGAGGTGTGTTCAGTGTGGTCGGTGCATTACGGATGATGAGTATGAGGAAACATTTTGTCTGGAAAAGCTTTGCTCAGATTGTGGGAAGGGGCATAAGTCTCAAGAGAGGCAGGATAGAAAGTATGGTCCATCCAAGTCTGTCATTCTCCATGAACAGAATTATGGCTTTGGTCAACATGGCTAG

Protein Analysis

494

Amino Acids

54.69

Weight (kDa)

5.65

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 708
Acc65I GGTACC 1 cut(s) 87
AccB1I GGYRCC 2 cut(s) 87, 327
AclWI GGATC 2 cut(s) 526, 699
AcsI RAATTY 4 cut(s) 10, 376, 547, 1076
AcuI CTGAAG 2 cut(s) 914, 1037
AdeI CACNNNGTG 1 cut(s) 334
AfaI GTAC 4 cut(s) 89, 262, 687, 949
AfiI CCNNNNNNNGG 4 cut(s) 97, 756, 1216, 1237
AjnI CCWGG 4 cut(s) 415, 858, 940, 1246
AjuI GAANNNNNNNTTGG 2 cut(s) 1067, 1099
AluBI AGCT 4 cut(s) 524, 1072, 1123, 1366
AluI AGCT 4 cut(s) 524, 1072, 1123, 1366
Alw21I GWGCWC 2 cut(s) 872, 1009
Alw26I GTCTC 2 cut(s) 726, 1401
Alw44I GTGCAC 1 cut(s) 1005
AlwI GGATC 2 cut(s) 526, 699
AlwNI CAGNNNCTG 2 cut(s) 536, 1210
AoxI GGCC 2 cut(s) 3, 134
ApaLI GTGCAC 1 cut(s) 1005
ApeKI GCWGC 2 cut(s) 1057, 1123
ApoI RAATTY 4 cut(s) 10, 376, 547, 1076
Asp718I GGTACC 1 cut(s) 87
AspA2I CCTAGG 1 cut(s) 917
AspS9I GGNCC 3 cut(s) 199, 238, 1424
AsuC2I CCSGG 1 cut(s) 36
AsuHPI GGTGA 3 cut(s) 57, 503, 755
AsuII TTCGAA 1 cut(s) 146
AsuNHI GCTAGC 1 cut(s) 922
AvaII GGWCC 3 cut(s) 199, 238, 1424
AvrII CCTAGG 1 cut(s) 917
AxyI CCTNAGG 1 cut(s) 1211
BaeGI GKGCMC 3 cut(s) 1009, 1091, 1196
BanI GGYRCC 2 cut(s) 87, 327
BanII GRGCYC 1 cut(s) 835
BauI CACGAG 1 cut(s) 92
Bbv12I GWGCWC 2 cut(s) 872, 1009
BbvCI CCTCAGC 1 cut(s) 1236
BbvI GCAGC 2 cut(s) 1069, 1110
BccI CCATC 6 cut(s) 116, 596, 623, 629, 881, 1435
BceAI ACGGC 1 cut(s) 288
BciT130I CCWGG 4 cut(s) 417, 860, 942, 1248
BclI TGATCA 1 cut(s) 433
BcnI CCSGG 1 cut(s) 36
BcoDI GTCTC 2 cut(s) 726, 1401
BfaI CTAG 4 cut(s) 918, 923, 1197, 1480
BfmI CTRYAG 1 cut(s) 845
BfuAI ACCTGC 1 cut(s) 708
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 2 cut(s) 1058, 1124
BlnI CCTAGG 1 cut(s) 917
BlsI GCNGC 2 cut(s) 1059, 1125
Bme1390I CCNGG 5 cut(s) 36, 417, 860, 942, 1248
Bme18I GGWCC 3 cut(s) 199, 238, 1424
BmgT120I GGNCC 3 cut(s) 199, 238, 1424
BmiI GGNNCC 5 cut(s) 89, 201, 240, 329, 404
BmrFI CCNGG 5 cut(s) 36, 417, 860, 942, 1248
BmrI ACTGGG 1 cut(s) 197
BmsI GCATC 2 cut(s) 484, 978
BmtI GCTAGC 1 cut(s) 926
BmuI ACTGGG 1 cut(s) 197
BoxI GACNNNNGTC 1 cut(s) 43
Bpu10I CCTNAGC 1 cut(s) 1236
Bpu14I TTCGAA 1 cut(s) 146
BpuEI CTTGAG 4 cut(s) 311, 819, 874, 1383
BpuMI CCSGG 1 cut(s) 36
BsaI GGTCTC 1 cut(s) 726
BsaJI CCNNGG 8 cut(s) 137, 415, 416, 505, 670, 917, 941, 1247
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 756, 1216, 1237
Bse1I ACTGG 1 cut(s) 203
Bse21I CCTNAGG 1 cut(s) 1211
BseBI CCWGG 4 cut(s) 417, 860, 942, 1248
BseDI CCNNGG 8 cut(s) 137, 415, 416, 505, 670, 917, 941, 1247
BseGI GGATG 4 cut(s) 607, 1258, 1336, 1427
BseLI CCNNNNNNNGG 4 cut(s) 97, 756, 1216, 1237
BseMII CTCAG 6 cut(s) 39, 970, 1202, 1227, 1280, 1386
BseNI ACTGG 1 cut(s) 203
BseRI GAGGAG 1 cut(s) 636
BseSI GKGCMC 3 cut(s) 1009, 1091, 1196
BseXI GCAGC 2 cut(s) 1069, 1110
BseYI CCCAGC 1 cut(s) 464
BsgI GTGCAG 1 cut(s) 549
BshFI GGCC 2 cut(s) 5, 136
BshNI GGYRCC 2 cut(s) 87, 327
BsiHKAI GWGCWC 2 cut(s) 872, 1009
BsiSI CCGG 1 cut(s) 36
BslFI GGGAC 1 cut(s) 352
BslI CCNNNNNNNGG 4 cut(s) 97, 756, 1216, 1237
BsmAI GTCTC 2 cut(s) 726, 1401
BsmFI GGGAC 1 cut(s) 352
BsmI GAATGC 1 cut(s) 142
BsnI GGCC 2 cut(s) 5, 136
Bso31I GGTCTC 1 cut(s) 726
Bsp119I TTCGAA 1 cut(s) 146
Bsp1286I GDGCHC 5 cut(s) 835, 872, 1009, 1091, 1196
Bsp143I GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
Bsp19I CCATGG 1 cut(s) 137
BspANI GGCC 2 cut(s) 5, 136
BspCNI CTCAG 6 cut(s) 40, 969, 1203, 1228, 1279, 1385
BspLI GGNNCC 5 cut(s) 89, 201, 240, 329, 404
BspMAI CTGCAG 1 cut(s) 849
BspMI ACCTGC 1 cut(s) 708
BspOI GCTAGC 1 cut(s) 926
BspPI GGATC 2 cut(s) 526, 699
BspQI GCTCTTC 1 cut(s) 1062
BspT104I TTCGAA 1 cut(s) 146
BspT107I GGYRCC 2 cut(s) 87, 327
BspTNI GGTCTC 1 cut(s) 726
BsrI ACTGG 1 cut(s) 203
BssECI CCNNGG 8 cut(s) 137, 415, 416, 505, 670, 917, 941, 1247
BssMI GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
BssSI CACGAG 1 cut(s) 92
BssT1I CCWWGG 3 cut(s) 137, 670, 917
Bst2BI CACGAG 1 cut(s) 92
Bst2UI CCWGG 4 cut(s) 417, 860, 942, 1248
Bst4CI ACNGT 3 cut(s) 509, 736, 743
Bst6I CTCTTC 1 cut(s) 1062
BstAPI GCANNNNNTGC 2 cut(s) 1281, 1290
BstBI TTCGAA 1 cut(s) 146
BstC8I GCNNGC 3 cut(s) 287, 924, 1282
BstDEI CTNAG 8 cut(s) 48, 873, 956, 999, 1211, 1236, 1266, 1372
BstDSI CCRYGG 2 cut(s) 137, 505
BstEII GGTNACC 1 cut(s) 743
BstENI CCTNNNNNAGG 1 cut(s) 95
BstF5I GGATG 4 cut(s) 607, 1258, 1336, 1427
BstKTI GATC 7 cut(s) 226, 436, 521, 694, 778, 879, 1015
BstMAI GTCTC 2 cut(s) 726, 1401
BstMBI GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
BstMWI GCNNNNNNNGC 3 cut(s) 1095, 1281, 1290
BstNI CCWGG 4 cut(s) 417, 860, 942, 1248
BstPAI GACNNNNGTC 1 cut(s) 43
BstPI GGTNACC 1 cut(s) 743
BstSCI CCNGG 5 cut(s) 34, 415, 858, 940, 1246
BstSFI CTRYAG 1 cut(s) 845
BstSLI GKGCMC 3 cut(s) 1009, 1091, 1196
BstV1I GCAGC 2 cut(s) 1069, 1110
BstX2I RGATCY 2 cut(s) 691, 1012
BstYI RGATCY 2 cut(s) 691, 1012
Bsu36I CCTNAGG 1 cut(s) 1211
BsuRI GGCC 2 cut(s) 5, 136
BtgI CCRYGG 2 cut(s) 137, 505
BtsCI GGATG 4 cut(s) 607, 1258, 1336, 1427
BtsI GCAGTG 2 cut(s) 537, 854
BtsIMutI CAGTG 5 cut(s) 537, 854, 879, 1089, 1316
BveI ACCTGC 1 cut(s) 708
Cac8I GCNNGC 3 cut(s) 287, 924, 1282
CaiI CAGNNNCTG 2 cut(s) 536, 1210
Cfr13I GGNCC 3 cut(s) 199, 238, 1424
Csp6I GTAC 4 cut(s) 88, 261, 686, 948
CviAII CATG 5 cut(s) 138, 250, 332, 1448, 1475
CviQI GTAC 4 cut(s) 88, 261, 686, 948
DdeI CTNAG 8 cut(s) 48, 873, 956, 999, 1211, 1236, 1266, 1372
DpnI GATC 7 cut(s) 225, 435, 520, 693, 777, 878, 1014
DpnII GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
DraIII CACNNNGTG 1 cut(s) 334
Eam1104I CTCTTC 1 cut(s) 1062
EarI CTCTTC 1 cut(s) 1062
Eco130I CCWWGG 3 cut(s) 137, 670, 917
Eco24I GRGCYC 1 cut(s) 835
Eco31I GGTCTC 1 cut(s) 726
Eco32I GATATC 1 cut(s) 279
Eco47I GGWCC 3 cut(s) 199, 238, 1424
Eco57I CTGAAG 2 cut(s) 914, 1037
Eco81I CCTNAGG 1 cut(s) 1211
Eco91I GGTNACC 1 cut(s) 743
EcoNI CCTNNNNNAGG 1 cut(s) 95
EcoO109I RGGNCCY 1 cut(s) 199
EcoO65I GGTNACC 1 cut(s) 743
EcoRII CCWGG 4 cut(s) 415, 858, 940, 1246
EcoRV GATATC 1 cut(s) 279
EcoT14I CCWWGG 3 cut(s) 137, 670, 917
EcoT38I GRGCYC 1 cut(s) 835
ErhI CCWWGG 3 cut(s) 137, 670, 917
FaeI CATG 5 cut(s) 141, 253, 335, 1451, 1478
FaqI GGGAC 1 cut(s) 352
FatI CATG 5 cut(s) 137, 249, 331, 1447, 1474
FbaI TGATCA 1 cut(s) 433
Fnu4HI GCNGC 2 cut(s) 1058, 1124
FokI GGATG 4 cut(s) 614, 1245, 1343, 1414
FriOI GRGCYC 1 cut(s) 835
Fsp4HI GCNGC 2 cut(s) 1058, 1124
FspBI CTAG 4 cut(s) 918, 923, 1197, 1480
GluI GCNGC 2 cut(s) 1058, 1124
GsaI CCCAGC 1 cut(s) 468
HaeIII GGCC 2 cut(s) 5, 136
HapII CCGG 1 cut(s) 36
Hin1II CATG 5 cut(s) 141, 253, 335, 1451, 1478
HincII GTYRAC 2 cut(s) 822, 1472
HindII GTYRAC 2 cut(s) 822, 1472
HindIII AAGCTT 1 cut(s) 1364
HinfI GANTC 2 cut(s) 1038, 1111
HpaI GTTAAC 1 cut(s) 822
HpaII CCGG 1 cut(s) 36
HphI GGTGA 3 cut(s) 57, 503, 755
Hpy166II GTNNAC 9 cut(s) 270, 307, 686, 739, 822, 948, 1007, 1037, 1472
Hpy188I TCNGA 8 cut(s) 49, 238, 518, 582, 894, 1017, 1206, 1375
Hpy188III TCNNGA 5 cut(s) 221, 599, 973, 1358, 1400
Hpy8I GTNNAC 9 cut(s) 270, 307, 686, 739, 822, 948, 1007, 1037, 1472
HpyAV CCTTC 4 cut(s) 243, 318, 475, 1378
HpyCH4III ACNGT 3 cut(s) 509, 736, 743
HpyCH4IV ACGT 1 cut(s) 266
HpyF10VI GCNNNNNNNGC 3 cut(s) 1095, 1281, 1290
HpyF3I CTNAG 8 cut(s) 48, 873, 956, 999, 1211, 1236, 1266, 1372
HpySE526I ACGT 1 cut(s) 266
Hsp92II CATG 5 cut(s) 141, 253, 335, 1451, 1478
KpnI GGTACC 1 cut(s) 91
Ksp22I TGATCA 1 cut(s) 433
KspAI GTTAAC 1 cut(s) 822
Kzo9I GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
LguI GCTCTTC 1 cut(s) 1062
Lsp1109I GCAGC 2 cut(s) 1069, 1110
LweI GCATC 2 cut(s) 484, 978
MaeI CTAG 4 cut(s) 918, 923, 1197, 1480
MaeII ACGT 1 cut(s) 266
MaeIII GTNAC 3 cut(s) 317, 743, 1048
MalI GATC 7 cut(s) 225, 435, 520, 693, 777, 878, 1014
MboI GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
MboII GAAGA 4 cut(s) 173, 638, 805, 1079
MflI RGATCY 2 cut(s) 691, 1012
MhlI GDGCHC 5 cut(s) 835, 872, 1009, 1091, 1196
MluCI AATT 8 cut(s) 10, 55, 352, 376, 547, 1029, 1076, 1456
MlyI GAGTC 1 cut(s) 1032
MmeI TCCRAC 1 cut(s) 1286
MseI TTAA 3 cut(s) 617, 821, 983
MslI CAYNNNNRTG 1 cut(s) 254
MspI CCGG 1 cut(s) 36
MspR9I CCNGG 5 cut(s) 36, 417, 860, 942, 1248
Mva1269I GAATGC 1 cut(s) 142
MvaI CCWGG 4 cut(s) 417, 860, 942, 1248
MwoI GCNNNNNNNGC 3 cut(s) 1095, 1281, 1290
NciI CCSGG 1 cut(s) 36
NcoI CCATGG 1 cut(s) 137
NdeII GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
NheI GCTAGC 1 cut(s) 922
NlaIII CATG 5 cut(s) 141, 253, 335, 1451, 1478
NlaIV GGNNCC 5 cut(s) 89, 201, 240, 329, 404
NmuCI GTSAC 2 cut(s) 743, 1048
NspV TTCGAA 1 cut(s) 146
PasI CCCWGGG 1 cut(s) 416
PciSI GCTCTTC 1 cut(s) 1062
PcsI WCGNNNNNNNCGW 1 cut(s) 272
PctI GAATGC 1 cut(s) 142
PfeI GAWTC 1 cut(s) 1111
PfoI TCCNGGA 1 cut(s) 34
PkrI GCNGC 2 cut(s) 1059, 1125
PleI GAGTC 1 cut(s) 1032
PpsI GAGTC 1 cut(s) 1032
PpuMI RGGWCCY 1 cut(s) 199
PshAI GACNNNNGTC 1 cut(s) 43
Psp5II RGGWCCY 1 cut(s) 199
Psp6I CCWGG 4 cut(s) 415, 858, 940, 1246
PspEI GGTNACC 1 cut(s) 743
PspFI CCCAGC 1 cut(s) 464
PspGI CCWGG 4 cut(s) 415, 858, 940, 1246
PspN4I GGNNCC 5 cut(s) 89, 201, 240, 329, 404
PspPI GGNCC 3 cut(s) 199, 238, 1424
PspPPI RGGWCCY 1 cut(s) 199
PstI CTGCAG 1 cut(s) 849
PstNI CAGNNNCTG 2 cut(s) 536, 1210
PsuI RGATCY 2 cut(s) 691, 1012
RsaI GTAC 4 cut(s) 89, 262, 687, 949
RsaNI GTAC 4 cut(s) 88, 261, 686, 948
RseI CAYNNNNRTG 1 cut(s) 254
SapI GCTCTTC 1 cut(s) 1062
SaqAI TTAA 3 cut(s) 617, 821, 983
SatI GCNGC 2 cut(s) 1058, 1124
Sau3AI GATC 7 cut(s) 223, 433, 518, 691, 775, 876, 1012
Sau96I GGNCC 3 cut(s) 199, 238, 1424
SchI GAGTC 1 cut(s) 1032
ScrFI CCNGG 5 cut(s) 36, 417, 860, 942, 1248
SduI GDGCHC 5 cut(s) 835, 872, 1009, 1091, 1196
SfaNI GCATC 2 cut(s) 484, 978
SfcI CTRYAG 1 cut(s) 845
SfuI TTCGAA 1 cut(s) 146
SinI GGWCC 3 cut(s) 199, 238, 1424
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 4 cut(s) 290, 834, 853, 1398
SmoI CTYRAG 4 cut(s) 290, 834, 853, 1398
Sse9I AATT 8 cut(s) 10, 55, 352, 376, 547, 1029, 1076, 1456
SspI AATATT 1 cut(s) 424
SspMI CTAG 4 cut(s) 918, 923, 1197, 1480
StyD4I CCNGG 5 cut(s) 34, 415, 858, 940, 1246
StyI CCWWGG 3 cut(s) 137, 670, 917
TaaI ACNGT 3 cut(s) 509, 736, 743
TaiI ACGT 1 cut(s) 269
TaqI TCGA 2 cut(s) 22, 146
TasI AATT 8 cut(s) 10, 55, 352, 376, 547, 1029, 1076, 1456
TatI WGTACW 1 cut(s) 947
TfiI GAWTC 1 cut(s) 1111
Tru1I TTAA 3 cut(s) 617, 821, 983
Tru9I TTAA 3 cut(s) 617, 821, 983
TscAI CASTG 5 cut(s) 537, 854, 886, 1096, 1316
TseFI GTSAC 2 cut(s) 743, 1048
TseI GCWGC 2 cut(s) 1057, 1123
Tsp45I GTSAC 2 cut(s) 743, 1048
TspDTI ATGAA 4 cut(s) 372, 639, 1118, 1464
TspGWI ACGGA 3 cut(s) 336, 716, 1343
TspRI CASTG 5 cut(s) 537, 854, 886, 1096, 1316
VneI GTGCAC 1 cut(s) 1005
VpaK11BI GGWCC 3 cut(s) 199, 238, 1424
XagI CCTNNNNNAGG 1 cut(s) 95
XapI RAATTY 4 cut(s) 10, 376, 547, 1076
XcmI CCANNNNNNNNNTGG 1 cut(s) 413
XmaJI CCTAGG 1 cut(s) 917
XspI CTAG 4 cut(s) 918, 923, 1197, 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.