FvH4_4g29510

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0018027
Physical Location & Seq
Forward (+)
29613525 .. 29615900
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29510.t1

Sequence Viewer

Length: 2376 bp
ATGGTAATCGATTGTGGCCCCTCGTCAACAACTCTGTCAAACAAAGTTGGGTTTCTAAAGCCGGTGTCTCCACTATCCACAGCTGATGATGAGAGTAATGATGGAGCTTCTAGTCATATACCTGGACCTATTCTCTTTCAGACAGACTACACTTACGTCTGTATTGTCCCTCCAGGTCCCAAAATCATTCAATTTCAGTTCTATCCACCCTCACTGGGAAGCACAAACGAATCCAAGGCATTGTTTACCATCAGTGCTGGAAAGTACACTTTGTTAAAGACTTCAGCATCCTCCTGCTCTATAGGTTCTCAAGGTCAAATCCAGCATGCTATCAGAGAATTCTACATCAATGTAGATGATGGAAGACTAAACGTGACATTCACGCCATCATCAACTCCTGGTGCCTATGCATTTGTAAACAAGATCAAAGTTGTTCCAGTGCCAACAAGTCTTTATGTGCGAGGAAATGATGAAGATCCCCTTCAAATTCGTCTCCTTGGACATAATCCTAATGATCAACAACTTTACATCCTCAATAACTCAAGGGCTCTTGAGACCATGTACCGAGTCAACATAGGAGGACCTTTCATCTCTCCTGACCTAGATGGTTCAGAGATGATGCGCACCTGGTCCACAGACAAAAGCTATATGAGTATAAATGAAGAGGTTGATACAGACATTCTACAGTCAAAAATAAAAATCAAGTACAGCGCAGAGGTCCCAGCATACACTGCACCAGTAAAAGTCTACACCACAACCAGGGCTTCATATGTCAACGGTGGTAATACTAGCTGGTCATTCCCTCTTGATCCTGGATTCTATTACCTCATCAGATTACATTTCTGCGAGATCAATAAGAAGATCAAACTAGGTGAAAGAGTTTTTAAAGTCTACATCAACTATCAAACAGCTGAGGGCCATGCAGATGTGTTTGAGTGGAGCAATGGAGCTGGATTTCCAGTACATCGAGATTATGTGGTTGATTATGCTTCTGGACATAGCAATAGCACGCAGAATCTGGTGGTGGCAATAGAAGGCATCAACTCAGAACTTGATGATCATCAGGGAATCTTAAATGGGTTGGAAATTTTCAAAATATCAGACAAGAACAACAATCTTGCTGGGGCGCATCCATTCGGCTTTGAAGTTGATCAGTACCGAAATATTCCAACATTAACAGCTACACTCTTTCGCCGAATAATAGTTACACTCCTGGCTATTCTGTTAGGTGTCATGGTACTGACTGTGGTATTCCACTTCATACGCTTCCGCCTAGGAAGGACATGGGTTAAACAAAGCTTTCTGCCCTGGCATTATTCTTCAGACCAATATTATTGTCAGAAATTCTCACTCACTGAGATGAAGTCCGCAACAAACAACTTCTGTCAAGCTTTTCAGATTGGCAGTGGTGGATTTGGGAATGTCTACAAGGGTTACATAGGAGGTGGTGTCTACACTGTGGATACTGTTGCTATAAAGCGTGCAAATCCCACTTCTAAGCAAGGCTTACATGAATTCCAAACAGAAATCACCATGCTCTCCAAGCTACGCCACCGCCACTTGGTTTCTTTGATTGGCTACTGCAAAGAGGATAAGGAAATGATACTTGTCTACGACTATATGGCGCAAGGTACACTCCGTGATCATCTTTATGGTAATCCCCGGAAACCACCACTTCCTTGGAAGCTGAGAGTCAAGATATGTATAGGAGCAGCCAGAGGATTGCACTATCTCCACACAGGGGCAAACGAAAAAATCATTCACCGGGATGTGAAGTCAAGTAACATACTGTTGGACAGGAATTTGGTTGCAAAAGTTTCAGATTTTGGATTGTCGAAAGTTGGCCCCAACCCGAATATGATGAGTAGTGACACTGCACATTCATCAAATGATGACACTCCTCATGTTAGCACTGCAGTGAAGGGTAGTTTTGGATACTTGGACCCGGAATATTATCGAAGACAGAAACTGACTGAGAAATCAGATGTTTATTCATTTGGGGTGGTGTTGTTTGAAGTTGTGTGTGCTAGGCCAGCTGTGATGAGCATTGTACAAAATGGGGAGCCAGAACATGTAAACCTAAGTGAATGGGCACTACAACATTATAATCCTGGTCAGGGTGGGAAAGCAATTGATCAAATTCTAGACCCGTCTCTACAGGGAAAGATCAATCCCGAATCTCTGAAGACATTCACAGACATAGCAAGGCAATGTTTGAGAGATAGAGGAAGTGAGCGGCCAACGATGGGGGATGTGTTGTGGAAGTTGGAGCTGGCATTGCAGCAGCAAGAAAGAGATGATCAAGTAGAAAACACTCGAACCGGCACGAGTTTTCCAATGGAAGGAACTTGGCAGACCAGGCCTGGTCTGCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

792

Amino Acids

88.44

Weight (kDa)

7.32

Isoelectric Point (pI)

33.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 103 - 366 1.9e-17 Malectin-like domain
Malectin PF11721 187 - 332 9.6e-09 Malectin domain
PK_Tyr_Ser-Thr PF07714 466 - 753 2.7e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 466 - 753 8.6e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018027)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g29510
rosa_chinensis RchiOBHm_Chr4g0437771 RchiOBHm_Chr4g0437781
rosa_laevigata RLG00000006417
rosa_multiflora Rmu_sc0001538.1_g000005 Rmu_sc0001629.1_g000005
rosa_roxburghii Rroxscaffold_5G00378880
rosa_rugosa Rorug04G0303600
rosa_samantha Rh4BG366400 Rh4CG380500
rosa_wichuraiana Rw4G031390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2106
Acc16I TGCGCA 1 cut(s) 623
AccB1I GGYRCC 1 cut(s) 401
AccBSI CCGCTC 1 cut(s) 2236
AccI GTMKAC 5 cut(s) 747, 891, 1425, 1452, 1611
AciI CCGC 4 cut(s) 1270, 1368, 1555, 2236
AclWI GGATC 2 cut(s) 470, 803
AcoI YGGCCR 1 cut(s) 2237
AcsI RAATTY 7 cut(s) 338, 486, 1086, 1343, 1514, 1801, 2139
AcuI CTGAAG 3 cut(s) 267, 1305, 2204
AdeI CACNNNGTG 1 cut(s) 1640
AfaI GTAC 8 cut(s) 266, 563, 707, 963, 1157, 1239, 1633, 2052
AfiI CCNNNNNNNGG 7 cut(s) 215, 759, 1561, 1741, 2117, 2246, 2342
AflIII ACRYGT 1 cut(s) 2071
AgsI TTSAA 5 cut(s) 191, 485, 1093, 1145, 2015
AleI CACNNNNGTG 1 cut(s) 1916
Alw26I GTCTC 4 cut(s) 72, 497, 548, 2157
AlwI GGATC 2 cut(s) 470, 803
AlwNI CAGNNNCTG 2 cut(s) 1018, 1969
AoxI GGCC 6 cut(s) 16, 916, 1843, 2030, 2237, 2360
ApeKI GCWGC 3 cut(s) 1712, 2281, 2284
ApoI RAATTY 7 cut(s) 338, 486, 1086, 1343, 1514, 1801, 2139
Asp700I GAANNNNTTC 1 cut(s) 2189
AspA2I CCTAGG 1 cut(s) 1273
AspLEI GCGC 4 cut(s) 624, 713, 1129, 1627
AspS9I GGNCC 9 cut(s) 17, 125, 176, 581, 630, 718, 916, 1844, 1942
AsuC2I CCSGG 3 cut(s) 1663, 1766, 1946
AsuHPI GGTGA 3 cut(s) 884, 1522, 1754
AvaII GGWCC 6 cut(s) 125, 176, 581, 630, 718, 1942
AvrII CCTAGG 1 cut(s) 1273
BaeGI GKGCMC 1 cut(s) 2095
BanI GGYRCC 1 cut(s) 401
BanII GRGCYC 1 cut(s) 550
BauI CACGAG 1 cut(s) 2326
BbsI GAAGAC 3 cut(s) 370, 1966, 2192
BbvCI CCTCAGC 1 cut(s) 912
BbvI GCAGC 3 cut(s) 1724, 2293, 2296
BccI CCATC 6 cut(s) 95, 257, 353, 394, 599, 2239
BciVI GTATCC 2 cut(s) 1456, 1928
BclI TGATCA 6 cut(s) 514, 1057, 1150, 1642, 2134, 2299
BcnI CCSGG 3 cut(s) 1663, 1766, 1946
BcoDI GTCTC 4 cut(s) 72, 497, 548, 2157
BfaI CTAG 8 cut(s) 111, 602, 789, 869, 1274, 2028, 2144, 2374
BfmI CTRYAG 4 cut(s) 300, 683, 1914, 2156
BfuI GTATCC 2 cut(s) 1456, 1928
BisI GCNGC 4 cut(s) 1713, 2237, 2282, 2285
BlnI CCTAGG 1 cut(s) 1273
BlsI GCNGC 4 cut(s) 1714, 2238, 2283, 2286
Bme18I GGWCC 6 cut(s) 125, 176, 581, 630, 718, 1942
BmgT120I GGNCC 9 cut(s) 17, 125, 176, 581, 630, 718, 916, 1844, 1942
BmiI GGNNCC 7 cut(s) 19, 178, 403, 720, 1846, 1944, 2064
BmrI ACTGGG 1 cut(s) 224
BmsI GCATC 4 cut(s) 296, 609, 1047, 1138
BmuI ACTGGG 1 cut(s) 224
BpiI GAAGAC 3 cut(s) 370, 1966, 2192
BpmI CTGGAG 1 cut(s) 156
Bpu10I CCTNAGC 1 cut(s) 912
BpuEI CTTGAG 3 cut(s) 294, 526, 572
BpuMI CCSGG 3 cut(s) 1663, 1766, 1946
Bsa29I ATCGAT 1 cut(s) 9
BsaBI GATNNNNATC 2 cut(s) 474, 1059
BsaI GGTCTC 1 cut(s) 548
BsaJI CCNNGG 7 cut(s) 234, 496, 759, 1273, 1307, 1661, 1679
BsaXI ACNNNNNCTCC 2 cut(s) 1434, 1464
Bsc4I CCNNNNNNNGG 7 cut(s) 215, 759, 1561, 1741, 2117, 2246, 2342
Bse118I RCCGGY 2 cut(s) 61, 2321
Bse1I ACTGG 4 cut(s) 219, 437, 737, 959
Bse3DI GCAATG 3 cut(s) 949, 2216, 2276
Bse8I GATNNNNATC 2 cut(s) 474, 1059
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 7 cut(s) 234, 496, 759, 1273, 1307, 1661, 1679
BseGI GGATG 5 cut(s) 287, 528, 1129, 1774, 2257
BseJI GATNNNNATC 2 cut(s) 474, 1059
BseLI CCNNNNNNNGG 7 cut(s) 215, 759, 1561, 1741, 2117, 2246, 2342
BseMI GCAATG 3 cut(s) 949, 2216, 2276
BseMII CTCAG 5 cut(s) 903, 1059, 1347, 1679, 1965
BseNI ACTGG 4 cut(s) 219, 437, 737, 959
BseRI GAGGAG 1 cut(s) 1890
BseSI GKGCMC 1 cut(s) 2095
BseXI GCAGC 3 cut(s) 1724, 2293, 2296
BseYI CCCAGC 2 cut(s) 721, 1121
BsgI GTGCAG 2 cut(s) 717, 1860
BshFI GGCC 6 cut(s) 18, 918, 1845, 2032, 2239, 2362
BshNI GGYRCC 1 cut(s) 401
BshVI ATCGAT 1 cut(s) 9
BsiSI CCGG 5 cut(s) 62, 1663, 1765, 1946, 2322
BslFI GGGAC 3 cut(s) 152, 162, 704
BslI CCNNNNNNNGG 7 cut(s) 215, 759, 1561, 1741, 2117, 2246, 2342
BsmAI GTCTC 4 cut(s) 72, 497, 548, 2157
BsmBI CGTCTC 2 cut(s) 497, 2157
BsmFI GGGAC 3 cut(s) 152, 162, 704
BsnI GGCC 6 cut(s) 18, 918, 1845, 2032, 2239, 2362
Bso31I GGTCTC 1 cut(s) 548
Bsp1286I GDGCHC 2 cut(s) 550, 2095
Bsp1407I TGTACA 1 cut(s) 2050
BspACI CCGC 4 cut(s) 1270, 1368, 1555, 2236
BspANI GGCC 6 cut(s) 18, 918, 1845, 2032, 2239, 2362
BspCNI CTCAG 5 cut(s) 904, 1058, 1348, 1680, 1966
BspDI ATCGAT 1 cut(s) 9
BspLI GGNNCC 7 cut(s) 19, 178, 403, 720, 1846, 1944, 2064
BspMAI CTGCAG 1 cut(s) 1918
BspPI GGATC 2 cut(s) 470, 803
BspT107I GGYRCC 1 cut(s) 401
BspTNI GGTCTC 1 cut(s) 548
BsrBI CCGCTC 1 cut(s) 2236
BsrDI GCAATG 3 cut(s) 949, 2216, 2276
BsrFI RCCGGY 2 cut(s) 61, 2321
BsrGI TGTACA 1 cut(s) 2050
BsrI ACTGG 4 cut(s) 219, 437, 737, 959
BssAI RCCGGY 2 cut(s) 61, 2321
BssECI CCNNGG 7 cut(s) 234, 496, 759, 1273, 1307, 1661, 1679
BssSI CACGAG 1 cut(s) 2326
BssT1I CCWWGG 4 cut(s) 234, 496, 1273, 1679
Bst2BI CACGAG 1 cut(s) 2326
Bst4CI ACNGT 6 cut(s) 687, 779, 1246, 1459, 1468, 1791
Bst6I CTCTTC 1 cut(s) 657
BstAPI GCANNNNNTGC 1 cut(s) 731
BstAUI TGTACA 1 cut(s) 2050
BstC8I GCNNGC 5 cut(s) 327, 1010, 1482, 2034, 2274
BstDEI CTNAG 7 cut(s) 912, 1045, 1356, 1497, 1688, 1974, 2081
BstF5I GGATG 5 cut(s) 287, 528, 1129, 1774, 2257
BstHHI GCGC 4 cut(s) 624, 713, 1129, 1627
BstMAI GTCTC 4 cut(s) 72, 497, 548, 2157
BstMWI GCNNNNNNNGC 6 cut(s) 731, 1543, 2033, 2278, 2359, 2368
BstNSI RCATGY 2 cut(s) 329, 2075
BstSFI CTRYAG 4 cut(s) 300, 683, 1914, 2156
BstSLI GKGCMC 1 cut(s) 2095
BstV1I GCAGC 3 cut(s) 1724, 2293, 2296
BstV2I GAAGAC 3 cut(s) 370, 1966, 2192
BstX2I RGATCY 1 cut(s) 475
BstXI CCANNNNNNTGG 1 cut(s) 1680
BstYI RGATCY 1 cut(s) 475
Bsu15I ATCGAT 1 cut(s) 9
BsuI GTATCC 2 cut(s) 1456, 1928
BsuRI GGCC 6 cut(s) 18, 918, 1845, 2032, 2239, 2362
BsuTUI ATCGAT 1 cut(s) 9
BtsCI GGATG 5 cut(s) 287, 528, 1129, 1774, 2257
BtsI GCAGTG 5 cut(s) 729, 1411, 1872, 1911, 1923
Cac8I GCNNGC 5 cut(s) 327, 1010, 1482, 2034, 2274
CaiI CAGNNNCTG 2 cut(s) 1018, 1969
CfoI GCGC 4 cut(s) 624, 713, 1129, 1627
Cfr10I RCCGGY 2 cut(s) 61, 2321
Cfr13I GGNCC 9 cut(s) 17, 125, 176, 581, 630, 718, 916, 1844, 1942
ClaI ATCGAT 1 cut(s) 9
CsiI ACCWGGT 1 cut(s) 626
Csp6I GTAC 8 cut(s) 265, 562, 706, 962, 1156, 1238, 1632, 2051
CviAII CATG 9 cut(s) 326, 559, 920, 1234, 1284, 1511, 1534, 1904, 2072
CviQI GTAC 8 cut(s) 265, 562, 706, 962, 1156, 1238, 1632, 2051
DdeI CTNAG 7 cut(s) 912, 1045, 1356, 1497, 1688, 1974, 2081
DraI TTTAAA 1 cut(s) 886
DraIII CACNNNGTG 1 cut(s) 1640
EaeI YGGCCR 1 cut(s) 2237
Eam1104I CTCTTC 1 cut(s) 657
EarI CTCTTC 1 cut(s) 657
EciI GGCGGA 1 cut(s) 1259
Eco130I CCWWGG 4 cut(s) 234, 496, 1273, 1679
Eco147I AGGCCT 1 cut(s) 2362
Eco24I GRGCYC 1 cut(s) 550
Eco31I GGTCTC 1 cut(s) 548
Eco47I GGWCC 6 cut(s) 125, 176, 581, 630, 718, 1942
Eco57I CTGAAG 3 cut(s) 267, 1305, 2204
EcoO109I RGGNCCY 3 cut(s) 176, 581, 718
EcoRI GAATTC 2 cut(s) 338, 1514
EcoT14I CCWWGG 4 cut(s) 234, 496, 1273, 1679
EcoT22I ATGCAT 1 cut(s) 412
EcoT38I GRGCYC 1 cut(s) 550
ErhI CCWWGG 4 cut(s) 234, 496, 1273, 1679
Esp3I CGTCTC 2 cut(s) 497, 2157
FaeI CATG 9 cut(s) 329, 562, 923, 1237, 1287, 1514, 1537, 1907, 2075
FalI AAGNNNNNCTT 4 cut(s) 465, 497, 1490, 1522
FaqI GGGAC 3 cut(s) 152, 162, 704
FatI CATG 9 cut(s) 325, 558, 919, 1233, 1283, 1510, 1533, 1903, 2071
FauNDI CATATG 1 cut(s) 769
FbaI TGATCA 6 cut(s) 514, 1057, 1150, 1642, 2134, 2299
FblI GTMKAC 5 cut(s) 747, 891, 1425, 1452, 1611
Fnu4HI GCNGC 4 cut(s) 1713, 2237, 2282, 2285
FokI GGATG 5 cut(s) 274, 515, 1116, 1781, 2264
FriOI GRGCYC 1 cut(s) 550
Fsp4HI GCNGC 4 cut(s) 1713, 2237, 2282, 2285
FspAI RTGCGCAY 1 cut(s) 623
FspBI CTAG 8 cut(s) 111, 602, 789, 869, 1274, 2028, 2144, 2374
FspI TGCGCA 1 cut(s) 623
GlaI GCGC 4 cut(s) 623, 712, 1128, 1626
GluI GCNGC 4 cut(s) 1713, 2237, 2282, 2285
GsaI CCCAGC 2 cut(s) 725, 1125
GsuI CTGGAG 1 cut(s) 156
HaeIII GGCC 6 cut(s) 18, 918, 1845, 2032, 2239, 2362
HapII CCGG 5 cut(s) 62, 1663, 1765, 1946, 2322
HhaI GCGC 4 cut(s) 624, 713, 1129, 1627
Hin1II CATG 9 cut(s) 329, 562, 923, 1237, 1287, 1514, 1537, 1907, 2075
Hin6I GCGC 4 cut(s) 622, 711, 1127, 1625
HinP1I GCGC 4 cut(s) 622, 711, 1127, 1625
HincII GTYRAC 3 cut(s) 27, 571, 775
HindII GTYRAC 3 cut(s) 27, 571, 775
HindIII AAGCTT 2 cut(s) 1297, 1389
HinfI GANTC 7 cut(s) 230, 567, 816, 1015, 1068, 1692, 2177
HpaII CCGG 5 cut(s) 62, 1663, 1765, 1946, 2322
HphI GGTGA 3 cut(s) 884, 1522, 1754
Hpy188III TCNNGA 8 cut(s) 551, 596, 806, 968, 993, 1696, 2144, 2174
HpyAV CCTTC 5 cut(s) 491, 1028, 1272, 1915, 2336
HpyCH4III ACNGT 6 cut(s) 687, 779, 1246, 1459, 1468, 1791
HpyCH4IV ACGT 2 cut(s) 156, 372
HpyF10VI GCNNNNNNNGC 6 cut(s) 731, 1543, 2033, 2278, 2359, 2368
HpyF3I CTNAG 7 cut(s) 912, 1045, 1356, 1497, 1688, 1974, 2081
HpySE526I ACGT 2 cut(s) 156, 372
Hsp92II CATG 9 cut(s) 329, 562, 923, 1237, 1287, 1514, 1537, 1907, 2075
HspAI GCGC 4 cut(s) 622, 711, 1127, 1625
Ksp22I TGATCA 6 cut(s) 514, 1057, 1150, 1642, 2134, 2299
LmnI GCTCC 6 cut(s) 104, 939, 947, 1709, 2062, 2269
Lsp1109I GCAGC 3 cut(s) 1724, 2293, 2296
LweI GCATC 4 cut(s) 296, 609, 1047, 1138
MabI ACCWGGT 1 cut(s) 626
MaeI CTAG 8 cut(s) 111, 602, 789, 869, 1274, 2028, 2144, 2374
MaeII ACGT 2 cut(s) 156, 372
MaeIII GTNAC 5 cut(s) 373, 1204, 1433, 1781, 1868
MbiI CCGCTC 1 cut(s) 2236
MboII GAAGA 7 cut(s) 375, 485, 674, 871, 1311, 1971, 2197
MfeI CAATTG 1 cut(s) 2130
MflI RGATCY 1 cut(s) 475
MhlI GDGCHC 2 cut(s) 550, 2095
MluCI AATT 9 cut(s) 191, 338, 486, 1086, 1343, 1514, 1801, 2130, 2139
MlyI GAGTC 2 cut(s) 576, 1701
MmeI TCCRAC 4 cut(s) 1062, 1193, 1773, 2247
Mph1103I ATGCAT 1 cut(s) 412
MroXI GAANNNNTTC 1 cut(s) 2189
MseI TTAA 5 cut(s) 275, 885, 1073, 1175, 1290
MslI CAYNNNNRTG 5 cut(s) 924, 1358, 1650, 1767, 1916
MspA1I CMGCKG 3 cut(s) 83, 911, 2036
MspI CCGG 5 cut(s) 62, 1663, 1765, 1946, 2322
MunI CAATTG 1 cut(s) 2130
MwoI GCNNNNNNNGC 6 cut(s) 731, 1543, 2033, 2278, 2359, 2368
NciI CCSGG 3 cut(s) 1663, 1766, 1946
NdeI CATATG 1 cut(s) 769
NlaIII CATG 9 cut(s) 329, 562, 923, 1237, 1287, 1514, 1537, 1907, 2075
NlaIV GGNNCC 7 cut(s) 19, 178, 403, 720, 1846, 1944, 2064
NmuCI GTSAC 2 cut(s) 373, 1868
NsbI TGCGCA 1 cut(s) 623
NsiI ATGCAT 1 cut(s) 412
NspI RCATGY 2 cut(s) 329, 2075
OliI CACNNNNGTG 1 cut(s) 1916
PaeI GCATGC 1 cut(s) 329
PceI AGGCCT 1 cut(s) 2362
PciI ACATGT 1 cut(s) 2071
PdmI GAANNNNTTC 1 cut(s) 2189
PfeI GAWTC 5 cut(s) 230, 816, 1015, 1068, 2177
PfoI TCCNGGA 1 cut(s) 811
PkrI GCNGC 4 cut(s) 1714, 2238, 2283, 2286
PleI GAGTC 2 cut(s) 575, 1700
PpsI GAGTC 2 cut(s) 575, 1700
PpuMI RGGWCCY 3 cut(s) 176, 581, 718
PscI ACATGT 1 cut(s) 2071
PsiI TTATAA 1 cut(s) 2106
Psp5II RGGWCCY 3 cut(s) 176, 581, 718
PspFI CCCAGC 2 cut(s) 721, 1121
PspN4I GGNNCC 7 cut(s) 19, 178, 403, 720, 1846, 1944, 2064
PspPI GGNCC 9 cut(s) 17, 125, 176, 581, 630, 718, 916, 1844, 1942
PspPPI RGGWCCY 3 cut(s) 176, 581, 718
PstI CTGCAG 1 cut(s) 1918
PstNI CAGNNNCTG 2 cut(s) 1018, 1969
PsuI RGATCY 1 cut(s) 475
PvuII CAGCTG 3 cut(s) 83, 911, 2036
RsaI GTAC 8 cut(s) 266, 563, 707, 963, 1157, 1239, 1633, 2052
RsaNI GTAC 8 cut(s) 265, 562, 706, 962, 1156, 1238, 1632, 2051
RseI CAYNNNNRTG 5 cut(s) 924, 1358, 1650, 1767, 1916
SaqAI TTAA 5 cut(s) 275, 885, 1073, 1175, 1290
SatI GCNGC 4 cut(s) 1713, 2237, 2282, 2285
Sau96I GGNCC 9 cut(s) 17, 125, 176, 581, 630, 718, 916, 1844, 1942
SchI GAGTC 2 cut(s) 576, 1701
SduI GDGCHC 2 cut(s) 550, 2095
SexAI ACCWGGT 1 cut(s) 626
SfaNI GCATC 4 cut(s) 296, 609, 1047, 1138
SfcI CTRYAG 4 cut(s) 300, 683, 1914, 2156
SinI GGWCC 6 cut(s) 125, 176, 581, 630, 718, 1942
SmiMI CAYNNNNRTG 5 cut(s) 924, 1358, 1650, 1767, 1916
SmlI CTYRAG 3 cut(s) 309, 541, 551
SmoI CTYRAG 3 cut(s) 309, 541, 551
SphI GCATGC 1 cut(s) 329
Sse9I AATT 9 cut(s) 191, 338, 486, 1086, 1343, 1514, 1801, 2130, 2139
SseBI AGGCCT 1 cut(s) 2362
SsiI CCGC 4 cut(s) 1270, 1368, 1555, 2236
SspI AATATT 3 cut(s) 1165, 1331, 1952
SspMI CTAG 8 cut(s) 111, 602, 789, 869, 1274, 2028, 2144, 2374
StuI AGGCCT 1 cut(s) 2362
StyI CCWWGG 4 cut(s) 234, 496, 1273, 1679
TaaI ACNGT 6 cut(s) 687, 779, 1246, 1459, 1468, 1791
TaiI ACGT 2 cut(s) 159, 375
TaqI TCGA 5 cut(s) 9, 967, 1835, 1957, 2317
TasI AATT 9 cut(s) 191, 338, 486, 1086, 1343, 1514, 1801, 2130, 2139
TatI WGTACW 4 cut(s) 264, 705, 961, 2050
TauI GCSGC 1 cut(s) 2239
TfiI GAWTC 5 cut(s) 230, 816, 1015, 1068, 2177
Tru1I TTAA 5 cut(s) 275, 885, 1073, 1175, 1290
Tru9I TTAA 5 cut(s) 275, 885, 1073, 1175, 1290
TseFI GTSAC 2 cut(s) 373, 1868
TseI GCWGC 3 cut(s) 1712, 2281, 2284
Tsp45I GTSAC 2 cut(s) 373, 1868
TspDTI ATGAA 9 cut(s) 486, 577, 675, 756, 1249, 1376, 1527, 1872, 1983
TspGWI ACGGA 1 cut(s) 1628
VpaK11BI GGWCC 6 cut(s) 125, 176, 581, 630, 718, 1942
XapI RAATTY 7 cut(s) 338, 486, 1086, 1343, 1514, 1801, 2139
XbaI TCTAGA 1 cut(s) 2143
XceI RCATGY 2 cut(s) 329, 2075
XcmI CCANNNNNNNNNTGG 1 cut(s) 1677
XmaJI CCTAGG 1 cut(s) 1273
XmiI GTMKAC 5 cut(s) 747, 891, 1425, 1452, 1611
XmnI GAANNNNTTC 1 cut(s) 2189
XspI CTAG 8 cut(s) 111, 602, 789, 869, 1274, 2028, 2144, 2374
Zsp2I ATGCAT 1 cut(s) 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.