RchiOBHm_Chr4g0437781

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0018027
Physical Location & Seq
Forward (+)
60747765 .. 60749540
1776 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40601

Sequence Viewer

Length: 1776 bp
ATGGCTCTTGAGACCATGTACCGAGTCAACGTAGGCGGGCCTTTCATCTCTCCTGATCTAGATGGTTCTGAGATGCTGCGCACCTGGTCCACAGACGAAACATATCTGAGAGCTTATGAGGACGATATACACATTCTTCAATCAAACATAGGAATTAAGTACAGCTCAGAGGTCCCAGCATACACTGCACCAGTAAAAGTATACACCACAACCAGGGCTTTATATGTTGATGGTAATACTAGCTGGTCATTCCCTCTTGATTCTGGATTCTATTACCTCATCAGATTTCATTTCTGCGAGATCAGTAAGAAGATTAAGCTAGGCGAAAGAGTTTTTAAAGTCTACATCAACTATCAAACAGCTGAGGACCATGCAGATGTAATCGAATGGAGCAATGGAGCTGGTCTTCCAGTACGTCGAGATTATGTCGTTGATTATGTTTCCGGGCTTAGCAATGGCACGTGGAATCTGGTGGTTGCAATAGAAAACACCAACTCAGAACTTGATGATCATCAGGGAATCTTAAATGGCTTGGAAATCTTCAAAATATCAGACACTAACAACAATCTTGCTGGGGCACATCCATTCGGTTTTGAAGTTGATCAGTACCAAAACATTCCAACATTTACTGCTGCACGTATCTTTCGCCGAATAGGTATTACACTCATGGCTATTCTGTTTGGTGTCCTTGTACTAACAGCGGTATTCCATTCCATAAAATTACCGGTAGGACAGCGATGGGGTAAACAAAGCTTTCTCCCCTGGCATTGTTCTTCAGACCACTATTATTGTCGAAACTTCTCACTTGCTGAGATGAAGTCTGCAACAAACAACTTCTGTCAAGGTTTTCTGATTGGCAGTGGTGGATTTGGGAAGGTCTACAAGGGTTATATAGGAGGTGCTGGCTACACTGCAACTACTATTGCTATAAAGCGTGCAAATCCCACTTCGAAGCAAGGCTTACATGAATTCCAAACAGAAATCACCATGCTCTCCAAGCTACGACACCACCACTTGGTTTCTTTGATTGGGTACTGCAAAGAGGACAAGGAAATGATACTTCTGTACGACTATATGGCACAAGGTACACTCCGTGATCATCTTTATGGTAAGTACCAGAAACCCCCACTTCCTTGGAAGCAGAGGATCAAGATATGTATAGGAGCAGCCCGAGGCCTGCACTATCTCCACACAGGGGCAAATGAAAAAATCATTCACCGGGATGTGAAGTCTAGTAACATATTGTTGGACAAAAATTTGGTGGCCAAAGTTTCAGATTTTGGATTGTCAAAAGTTGGCCCCGACCAGAATATGATTAGTGCCACTGCCCAATCATCAAATGGTGAGACTCCTCATGTTAGCACTGAAGTAAAGGGTAGTTTTGGATACCTGGACCCGGAATATTATCGAAGACAGAAACTGACCGAGAAATCAGACGTTTATTCATTTGGGGTACTGTTGTTTGAAGTTGTGTGTGCTAGGCCAGCTGTGATAAGCGTTGTAGAAAATGGGGAGCCAGAACAAGTAAACTTAAGTGAATGGGCACTAGAACATTGTAATCCTGGACAGGAGGGGAAAGCAATTGATCACATCCTAGACCCGTCTCTATGGGGAAAGATCAATTCCGAGTCTCTGAAGACATTCACAGACATAGCAAGGCAATGTTTGACAGATACGGGGAGTGAGCGGCCGTCGATGGGTGACGTGTTGTGGAAGTTGGAGCTGGCATTGCAGCAGCAAGAAAGAGCTGATCAAGTAGAAAACTATCGGCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

591

Amino Acids

66.55

Weight (kDa)

6.27

Isoelectric Point (pI)

34.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 3 - 183 1e-11 Malectin-like domain
Malectin PF11721 7 - 143 4.4e-07 Malectin domain
Pkinase PF00069 284 - 570 9.6e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 285 - 516 2e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018027)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g29510
rosa_chinensis RchiOBHm_Chr4g0437771 RchiOBHm_Chr4g0437781
rosa_laevigata RLG00000006417
rosa_multiflora Rmu_sc0001538.1_g000005 Rmu_sc0001629.1_g000005
rosa_roxburghii Rroxscaffold_5G00378880
rosa_rugosa Rorug04G0303600
rosa_samantha Rh4BG366400 Rh4CG380500
rosa_wichuraiana Rw4G031390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 80
AccB7I CCANNNNNTGG 1 cut(s) 1015
AccBSI CCGCTC 1 cut(s) 1687
AccI GTMKAC 3 cut(s) 201, 342, 879
AciI CCGC 3 cut(s) 36, 701, 1687
AclWI GGATC 1 cut(s) 1154
AcoI YGGCCR 2 cut(s) 1263, 1688
AcsI RAATTY 2 cut(s) 968, 1255
AcuI CTGAAG 3 cut(s) 759, 1386, 1655
AcvI CACGTG 1 cut(s) 462
AdeI CACNNNGTG 1 cut(s) 1094
AfiI CCNNNNNNNGG 5 cut(s) 213, 1015, 1195, 1396, 1697
AflII CTTAAG 1 cut(s) 1531
AflIII ACRYGT 1 cut(s) 1704
AgeI ACCGGT 1 cut(s) 724
AgsI TTSAA 4 cut(s) 140, 544, 596, 1466
AjiI CACGTC 1 cut(s) 1705
AjnI CCWGG 5 cut(s) 83, 212, 761, 1389, 1561
Alw26I GTCTC 4 cut(s) 5, 1340, 1608, 1635
AlwI GGATC 1 cut(s) 1154
AlwNI CAGNNNCTG 1 cut(s) 1420
Ama87I CYCGRG 1 cut(s) 1170
AoxI GGCC 7 cut(s) 38, 1174, 1263, 1297, 1481, 1688, 1769
ApeKI GCWGC 5 cut(s) 76, 632, 1166, 1732, 1735
ApoI RAATTY 2 cut(s) 968, 1255
AsiGI ACCGGT 1 cut(s) 724
Asp700I GAANNNNTTC 1 cut(s) 1640
AspLEI GCGC 1 cut(s) 81
AspS9I GGNCC 7 cut(s) 38, 87, 172, 367, 1298, 1393, 1770
AsuC2I CCSGG 3 cut(s) 445, 1220, 1397
AsuHPI GGTGA 4 cut(s) 976, 1208, 1355, 1712
AsuII TTCGAA 1 cut(s) 950
AvaI CYCGRG 1 cut(s) 1170
AvaII GGWCC 4 cut(s) 87, 172, 367, 1393
BaeGI GKGCMC 2 cut(s) 580, 1546
BaeI ACNNNNGTAYC 4 cut(s) 1049, 1082, 1445, 1478
BalI TGGCCA 1 cut(s) 1265
BbrPI CACGTG 1 cut(s) 462
BbsI GAAGAC 3 cut(s) 398, 1417, 1643
BbvCI CCTCAGC 1 cut(s) 363
BbvI GCAGC 5 cut(s) 63, 619, 1178, 1744, 1747
BccI CCATC 4 cut(s) 56, 224, 732, 1690
BceAI ACGGC 1 cut(s) 1675
BciT130I CCWGG 5 cut(s) 85, 214, 763, 1391, 1563
BciVI GTATCC 1 cut(s) 1379
BclI TGATCA 5 cut(s) 508, 601, 1096, 1585, 1750
BcnI CCSGG 3 cut(s) 445, 1220, 1397
BcoDI GTCTC 4 cut(s) 5, 1340, 1608, 1635
BfaI CTAG 8 cut(s) 59, 240, 320, 1233, 1479, 1547, 1595, 1774
BfrI CTTAAG 1 cut(s) 1531
BfuI GTATCC 1 cut(s) 1379
BisI GCNGC 6 cut(s) 77, 633, 1167, 1688, 1733, 1736
BlpI GCTNAGC 1 cut(s) 449
BlsI GCNGC 6 cut(s) 78, 634, 1168, 1689, 1734, 1737
Bme1390I CCNGG 8 cut(s) 85, 214, 445, 763, 1220, 1391, 1397, 1563
Bme18I GGWCC 4 cut(s) 87, 172, 367, 1393
BmeT110I CYCGRG 1 cut(s) 1170
BmgBI CACGTC 1 cut(s) 1705
BmgT120I GGNCC 7 cut(s) 38, 87, 172, 367, 1298, 1393, 1770
BmiI GGNNCC 4 cut(s) 174, 1300, 1395, 1515
BmrFI CCNGG 8 cut(s) 85, 214, 445, 763, 1220, 1391, 1397, 1563
BmsI GCATC 1 cut(s) 63
BpiI GAAGAC 3 cut(s) 398, 1417, 1643
Bpu10I CCTNAGC 1 cut(s) 363
Bpu1102I GCTNAGC 1 cut(s) 449
Bpu14I TTCGAA 1 cut(s) 950
BpuEI CTTGAG 1 cut(s) 29
BpuMI CCSGG 3 cut(s) 445, 1220, 1397
BsaAI YACGTR 2 cut(s) 462, 638
BsaBI GATNNNNATC 1 cut(s) 510
BsaI GGTCTC 1 cut(s) 5
BsaJI CCNNGG 4 cut(s) 213, 761, 1133, 1171
BsaWI WCCGGW 1 cut(s) 724
Bsc4I CCNNNNNNNGG 5 cut(s) 213, 1015, 1195, 1396, 1697
Bse118I RCCGGY 1 cut(s) 724
Bse1I ACTGG 2 cut(s) 191, 410
Bse3DI GCAATG 4 cut(s) 400, 460, 1667, 1727
Bse8I GATNNNNATC 1 cut(s) 510
BseBI CCWGG 5 cut(s) 85, 214, 763, 1391, 1563
BseDI CCNNGG 4 cut(s) 213, 761, 1133, 1171
BseGI GGATG 3 cut(s) 580, 1228, 1590
BseJI GATNNNNATC 1 cut(s) 510
BseLI CCNNNNNNNGG 5 cut(s) 213, 1015, 1195, 1396, 1697
BseMI GCAATG 4 cut(s) 400, 460, 1667, 1727
BseMII CTCAG 6 cut(s) 60, 98, 180, 354, 510, 801
BseNI ACTGG 2 cut(s) 191, 410
BseRI GAGGAG 1 cut(s) 1341
BseSI GKGCMC 2 cut(s) 580, 1546
BseX3I CGGCCG 1 cut(s) 1688
BseXI GCAGC 5 cut(s) 63, 619, 1178, 1744, 1747
BseYI CCCAGC 2 cut(s) 175, 572
BsgI GTGCAG 3 cut(s) 171, 618, 1163
Bsh1285I CGRYCG 1 cut(s) 1691
BshFI GGCC 7 cut(s) 40, 1176, 1265, 1299, 1483, 1690, 1771
BshTI ACCGGT 1 cut(s) 724
BsiEI CGRYCG 1 cut(s) 1691
BsiHKCI CYCGRG 1 cut(s) 1170
BsiSI CCGG 4 cut(s) 444, 725, 1219, 1397
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 5 cut(s) 213, 1015, 1195, 1396, 1697
BsmAI GTCTC 4 cut(s) 5, 1340, 1608, 1635
BsmBI CGTCTC 1 cut(s) 1608
BsmFI GGGAC 1 cut(s) 158
BsnI GGCC 7 cut(s) 40, 1176, 1265, 1299, 1483, 1690, 1771
Bso31I GGTCTC 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 1170
Bsp119I TTCGAA 1 cut(s) 950
Bsp1286I GDGCHC 2 cut(s) 580, 1546
Bsp143I GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
Bsp1720I GCTNAGC 1 cut(s) 449
BspACI CCGC 3 cut(s) 36, 701, 1687
BspANI GGCC 7 cut(s) 40, 1176, 1265, 1299, 1483, 1690, 1771
BspCNI CTCAG 6 cut(s) 61, 99, 179, 355, 509, 802
BspLI GGNNCC 4 cut(s) 174, 1300, 1395, 1515
BspPI GGATC 1 cut(s) 1154
BspT104I TTCGAA 1 cut(s) 950
BspTI CTTAAG 1 cut(s) 1531
BspTNI GGTCTC 1 cut(s) 5
BsrBI CCGCTC 1 cut(s) 1687
BsrDI GCAATG 4 cut(s) 400, 460, 1667, 1727
BsrFI RCCGGY 1 cut(s) 724
BsrI ACTGG 2 cut(s) 191, 410
BssAI RCCGGY 1 cut(s) 724
BssECI CCNNGG 4 cut(s) 213, 761, 1133, 1171
BssMI GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
BssNAI GTATAC 1 cut(s) 202
BssT1I CCWWGG 1 cut(s) 1133
Bst1107I GTATAC 1 cut(s) 202
Bst2UI CCWGG 5 cut(s) 85, 214, 763, 1391, 1563
Bst4CI ACNGT 1 cut(s) 1458
BstAFI CTTAAG 1 cut(s) 1531
BstAPI GCANNNNNTGC 1 cut(s) 185
BstBAI YACGTR 2 cut(s) 462, 638
BstBI TTCGAA 1 cut(s) 950
BstC8I GCNNGC 6 cut(s) 38, 904, 936, 1178, 1485, 1725
BstDEI CTNAG 7 cut(s) 69, 107, 166, 363, 449, 496, 810
BstF5I GGATG 3 cut(s) 580, 1228, 1590
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 9 cut(s) 58, 303, 511, 604, 1099, 1149, 1588, 1620, 1753
BstMAI GTCTC 4 cut(s) 5, 1340, 1608, 1635
BstMBI GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
BstMCI CGRYCG 1 cut(s) 1691
BstMWI GCNNNNNNNGC 4 cut(s) 185, 997, 1484, 1729
BstNI CCWGG 5 cut(s) 85, 214, 763, 1391, 1563
BstSCI CCNGG 8 cut(s) 83, 212, 443, 761, 1218, 1389, 1395, 1561
BstSLI GKGCMC 2 cut(s) 580, 1546
BstV1I GCAGC 5 cut(s) 63, 619, 1178, 1744, 1747
BstV2I GAAGAC 3 cut(s) 398, 1417, 1643
BstXI CCANNNNNNTGG 1 cut(s) 1134
BstZ17I GTATAC 1 cut(s) 202
BstZI CGGCCG 1 cut(s) 1688
BsuI GTATCC 1 cut(s) 1379
BsuRI GGCC 7 cut(s) 40, 1176, 1265, 1299, 1483, 1690, 1771
BtgZI GCGATG 1 cut(s) 751
BtrI CACGTC 1 cut(s) 1705
BtsCI GGATG 3 cut(s) 580, 1228, 1590
BtsI GCAGTG 4 cut(s) 183, 865, 909, 1323
BtsIMutI CAGTG 5 cut(s) 183, 865, 909, 1323, 1362
Cac8I GCNNGC 6 cut(s) 38, 904, 936, 1178, 1485, 1725
CaiI CAGNNNCTG 1 cut(s) 1420
CfoI GCGC 1 cut(s) 81
Cfr10I RCCGGY 1 cut(s) 724
Cfr13I GGNCC 7 cut(s) 38, 87, 172, 367, 1298, 1393, 1770
CsiI ACCWGGT 1 cut(s) 83
CspAI ACCGGT 1 cut(s) 724
CspCI CAANNNNNGTGG 2 cut(s) 770, 805
CviAII CATG 6 cut(s) 16, 371, 667, 965, 988, 1355
DdeI CTNAG 7 cut(s) 69, 107, 166, 363, 449, 496, 810
DpnI GATC 9 cut(s) 57, 302, 510, 603, 1098, 1148, 1587, 1619, 1752
DpnII GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
DraI TTTAAA 1 cut(s) 337
DraIII CACNNNGTG 1 cut(s) 1094
EaeI YGGCCR 2 cut(s) 1263, 1688
EagI CGGCCG 1 cut(s) 1688
EclXI CGGCCG 1 cut(s) 1688
Eco130I CCWWGG 1 cut(s) 1133
Eco147I AGGCCT 1 cut(s) 1176
Eco31I GGTCTC 1 cut(s) 5
Eco47I GGWCC 4 cut(s) 87, 172, 367, 1393
Eco52I CGGCCG 1 cut(s) 1688
Eco57I CTGAAG 3 cut(s) 759, 1386, 1655
Eco72I CACGTG 1 cut(s) 462
Eco88I CYCGRG 1 cut(s) 1170
EcoO109I RGGNCCY 1 cut(s) 172
EcoRI GAATTC 1 cut(s) 968
EcoRII CCWGG 5 cut(s) 83, 212, 761, 1389, 1561
EcoT14I CCWWGG 1 cut(s) 1133
ErhI CCWWGG 1 cut(s) 1133
Esp3I CGTCTC 1 cut(s) 1608
FaeI CATG 6 cut(s) 19, 374, 670, 968, 991, 1358
FalI AAGNNNNNCTT 2 cut(s) 944, 976
FaqI GGGAC 1 cut(s) 158
FatI CATG 6 cut(s) 15, 370, 666, 964, 987, 1354
FauI CCCGC 1 cut(s) 29
FbaI TGATCA 5 cut(s) 508, 601, 1096, 1585, 1750
FblI GTMKAC 3 cut(s) 201, 342, 879
Fnu4HI GCNGC 6 cut(s) 77, 633, 1167, 1688, 1733, 1736
FokI GGATG 3 cut(s) 567, 1235, 1577
Fsp4HI GCNGC 6 cut(s) 77, 633, 1167, 1688, 1733, 1736
FspBI CTAG 8 cut(s) 59, 240, 320, 1233, 1479, 1547, 1595, 1774
FspI TGCGCA 1 cut(s) 80
GlaI GCGC 1 cut(s) 80
GluI GCNGC 6 cut(s) 77, 633, 1167, 1688, 1733, 1736
GsaI CCCAGC 2 cut(s) 179, 576
HaeIII GGCC 7 cut(s) 40, 1176, 1265, 1299, 1483, 1690, 1771
HapII CCGG 4 cut(s) 444, 725, 1219, 1397
HhaI GCGC 1 cut(s) 81
Hin1II CATG 6 cut(s) 19, 374, 670, 968, 991, 1358
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HindIII AAGCTT 1 cut(s) 751
HinfI GANTC 7 cut(s) 24, 260, 267, 466, 519, 1348, 1628
HpaII CCGG 4 cut(s) 444, 725, 1219, 1397
HphI GGTGA 4 cut(s) 976, 1208, 1355, 1712
Hpy166II GTNNAC 8 cut(s) 28, 90, 202, 343, 746, 880, 1088, 1528
Hpy188III TCNNGA 7 cut(s) 8, 53, 59, 257, 264, 419, 1150
Hpy8I GTNNAC 8 cut(s) 28, 90, 202, 343, 746, 880, 1088, 1528
Hpy99I CGWCG 2 cut(s) 420, 1696
HpyAV CCTTC 1 cut(s) 868
HpyCH4III ACNGT 1 cut(s) 1458
HpyCH4IV ACGT 6 cut(s) 30, 415, 461, 637, 1437, 1704
HpyF10VI GCNNNNNNNGC 4 cut(s) 185, 997, 1484, 1729
HpyF3I CTNAG 7 cut(s) 69, 107, 166, 363, 449, 496, 810
HpySE526I ACGT 6 cut(s) 30, 415, 461, 637, 1437, 1704
Hsp92II CATG 6 cut(s) 19, 374, 670, 968, 991, 1358
HspAI GCGC 1 cut(s) 79
Ksp22I TGATCA 5 cut(s) 508, 601, 1096, 1585, 1750
Kzo9I GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
LmnI GCTCC 5 cut(s) 390, 398, 1163, 1513, 1720
Lsp1109I GCAGC 5 cut(s) 63, 619, 1178, 1744, 1747
LweI GCATC 1 cut(s) 63
MabI ACCWGGT 1 cut(s) 83
MaeI CTAG 8 cut(s) 59, 240, 320, 1233, 1479, 1547, 1595, 1774
MaeII ACGT 6 cut(s) 30, 415, 461, 637, 1437, 1704
MaeIII GTNAC 2 cut(s) 1235, 1700
MalI GATC 9 cut(s) 57, 302, 510, 603, 1098, 1148, 1587, 1619, 1752
MbiI CCGCTC 1 cut(s) 1687
MboI GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
MboII GAAGA 7 cut(s) 128, 322, 398, 532, 765, 1422, 1648
MfeI CAATTG 1 cut(s) 1581
MhlI GDGCHC 2 cut(s) 580, 1546
MlsI TGGCCA 1 cut(s) 1265
MluCI AATT 6 cut(s) 153, 719, 968, 1255, 1581, 1621
MluNI TGGCCA 1 cut(s) 1265
MlyI GAGTC 3 cut(s) 33, 1342, 1637
MmeI TCCRAC 3 cut(s) 644, 1227, 1698
Mox20I TGGCCA 1 cut(s) 1265
MroXI GAANNNNTTC 1 cut(s) 1640
MscI TGGCCA 1 cut(s) 1265
MseI TTAA 5 cut(s) 156, 315, 336, 524, 1532
MslI CAYNNNNRTG 3 cut(s) 375, 1104, 1221
Msp20I TGGCCA 1 cut(s) 1265
MspA1I CMGCKG 3 cut(s) 362, 701, 1487
MspCI CTTAAG 1 cut(s) 1531
MspI CCGG 4 cut(s) 444, 725, 1219, 1397
MspR9I CCNGG 8 cut(s) 85, 214, 445, 763, 1220, 1391, 1397, 1563
MunI CAATTG 1 cut(s) 1581
MvaI CCWGG 5 cut(s) 85, 214, 763, 1391, 1563
MwoI GCNNNNNNNGC 4 cut(s) 185, 997, 1484, 1729
NciI CCSGG 3 cut(s) 445, 1220, 1397
NdeII GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
NlaIII CATG 6 cut(s) 19, 374, 670, 968, 991, 1358
NlaIV GGNNCC 4 cut(s) 174, 1300, 1395, 1515
NmuCI GTSAC 1 cut(s) 1700
NsbI TGCGCA 1 cut(s) 80
NspV TTCGAA 1 cut(s) 950
PceI AGGCCT 1 cut(s) 1176
PdmI GAANNNNTTC 1 cut(s) 1640
PfeI GAWTC 4 cut(s) 260, 267, 466, 519
PflMI CCANNNNNTGG 1 cut(s) 1015
PfoI TCCNGGA 1 cut(s) 1561
PinAI ACCGGT 1 cut(s) 724
PkrI GCNGC 6 cut(s) 78, 634, 1168, 1689, 1734, 1737
PleI GAGTC 3 cut(s) 32, 1342, 1636
PmaCI CACGTG 1 cut(s) 462
PmlI CACGTG 1 cut(s) 462
PpsI GAGTC 3 cut(s) 32, 1342, 1636
Ppu21I YACGTR 2 cut(s) 462, 638
PpuMI RGGWCCY 1 cut(s) 172
Psp5II RGGWCCY 1 cut(s) 172
Psp6I CCWGG 5 cut(s) 83, 212, 761, 1389, 1561
PspCI CACGTG 1 cut(s) 462
PspFI CCCAGC 2 cut(s) 175, 572
PspGI CCWGG 5 cut(s) 83, 212, 761, 1389, 1561
PspN4I GGNNCC 4 cut(s) 174, 1300, 1395, 1515
PspPI GGNCC 7 cut(s) 38, 87, 172, 367, 1298, 1393, 1770
PspPPI RGGWCCY 1 cut(s) 172
PstNI CAGNNNCTG 1 cut(s) 1420
PvuII CAGCTG 2 cut(s) 362, 1487
RseI CAYNNNNRTG 3 cut(s) 375, 1104, 1221
SaqAI TTAA 5 cut(s) 156, 315, 336, 524, 1532
SatI GCNGC 6 cut(s) 77, 633, 1167, 1688, 1733, 1736
Sau3AI GATC 9 cut(s) 55, 300, 508, 601, 1096, 1146, 1585, 1617, 1750
Sau96I GGNCC 7 cut(s) 38, 87, 172, 367, 1298, 1393, 1770
SchI GAGTC 3 cut(s) 33, 1342, 1637
ScrFI CCNGG 8 cut(s) 85, 214, 445, 763, 1220, 1391, 1397, 1563
SduI GDGCHC 2 cut(s) 580, 1546
SexAI ACCWGGT 1 cut(s) 83
SfaNI GCATC 1 cut(s) 63
SfuI TTCGAA 1 cut(s) 950
SinI GGWCC 4 cut(s) 87, 172, 367, 1393
SmiMI CAYNNNNRTG 3 cut(s) 375, 1104, 1221
SmlI CTYRAG 2 cut(s) 8, 1531
SmoI CTYRAG 2 cut(s) 8, 1531
Sse9I AATT 6 cut(s) 153, 719, 968, 1255, 1581, 1621
SseBI AGGCCT 1 cut(s) 1176
SsiI CCGC 3 cut(s) 36, 701, 1687
SspI AATATT 1 cut(s) 1403
SspMI CTAG 8 cut(s) 59, 240, 320, 1233, 1479, 1547, 1595, 1774
StuI AGGCCT 1 cut(s) 1176
StyD4I CCNGG 8 cut(s) 83, 212, 443, 761, 1218, 1389, 1395, 1561
StyI CCWWGG 1 cut(s) 1133
TaaI ACNGT 1 cut(s) 1458
TaiI ACGT 6 cut(s) 33, 418, 464, 640, 1440, 1707
TaqI TCGA 6 cut(s) 384, 418, 793, 950, 1408, 1694
TaqII GACCGA 1 cut(s) 1439
TasI AATT 6 cut(s) 153, 719, 968, 1255, 1581, 1621
TatI WGTACW 2 cut(s) 159, 691
TauI GCSGC 1 cut(s) 1690
TfiI GAWTC 4 cut(s) 260, 267, 466, 519
Tru1I TTAA 5 cut(s) 156, 315, 336, 524, 1532
Tru9I TTAA 5 cut(s) 156, 315, 336, 524, 1532
TscAI CASTG 5 cut(s) 190, 865, 916, 1330, 1369
TseFI GTSAC 1 cut(s) 1700
TseI GCWGC 5 cut(s) 76, 632, 1166, 1732, 1735
Tsp45I GTSAC 1 cut(s) 1700
TspDTI ATGAA 6 cut(s) 34, 278, 830, 981, 1218, 1434
TspGWI ACGGA 1 cut(s) 1082
TspRI CASTG 5 cut(s) 190, 865, 916, 1330, 1369
Van91I CCANNNNNTGG 1 cut(s) 1015
Vha464I CTTAAG 1 cut(s) 1531
VpaK11BI GGWCC 4 cut(s) 87, 172, 367, 1393
XapI RAATTY 2 cut(s) 968, 1255
XbaI TCTAGA 1 cut(s) 58
XcmI CCANNNNNNNNNTGG 1 cut(s) 1337
XmiI GTMKAC 3 cut(s) 201, 342, 879
XmnI GAANNNNTTC 1 cut(s) 1640
XspI CTAG 8 cut(s) 59, 240, 320, 1233, 1479, 1547, 1595, 1774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.