RLG00000006417

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0018027
Physical Location & Seq
Reverse (-)
6913385 .. 6918223
4839 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006417

Sequence Viewer

Length: 2472 bp
ATGGAGAATGCCCAAAAAGCTCAGAACATGAATGCCCAGAAAGTTCGAATGCAGCACACAAAGCTTCGATCAGATTATGTGCTAGCAGATGACATGGTAATCGACTGTGGCCCGTTGTCAACATCCAGAGTTGGGTTTCTAGAGCCGGTGTCTCCACTATCCACCATTGATGCTGAGAGTAAGATTGGAGCTTCTAGTCTTATACCTGGACCTATTCTCTTTCAAACGAACTACACTTACACCTGTATCGTCCCTCCAGGTCCCAAAATCATTCAATTCCAGTTCTATCCAACCTCACTGGAAAGCATAAACAAATCCGAAGCATTATTTACCATAGGTTCTCAAGGTCAAATCCAGCATGCCATCAGAGAATTCTGCATCAACGTAGATCATGGAAGACTACACGTGACATTCACGCCATCATCAACTCCTGGTGCCTATGCATTTGTAAACAAGATCAAAGTTGTTTCGGTGCCAACAAGTCTTTATGTGAGAGGAAATGATGAAGTTCCCCTTCCAATTCGTCTCATCGGACATAATCCTAAAGACCATCAAGTTTACATCCTCAACAACTCAATGGCTCTTGAGACCATGTACCGAGTCAACGTCGGCGGGCCTTTCATCTCTCCTGATCTAGATGGTTCTGAGATGCTGCGCACCTGGTCCACAGACGAAACATATCTGAGTGCTTATGAGGACGATACACACATTCTTCAATCAAACATAGGAATTAAGTACAGCTCAGAGGTCCCAGCATACACTGCACCAGTAAAAGTATACACCACAACCAGGGCTTTATATGTTGATGGTAATACTAGCTGGTCATTCCCTCTTGATTCTGGATTCTATTACCTCATCAGATTTCATTTCTGCGAGATCAGTAAGAAGATTAAGCTAGGCGAAAGAGTTTTTAAAGTCTACATCAACTATCAAACAGCTGAGGACCATGCAGATGTAATCGAATGGAGCAATGGAGCTGGTCTTCCAGTACGTCGAGATTATGTCGTTGATTATGTTTCCGGGCATAGCAATAGCACGCGGAATCTGGTGGTTGCAATAGAAAACACCAACTCAGAACTTGATGATCATCAGGGAATCTTAAATGGCTTGGAAATCTTCAAAATATCAGACACTAACAACAATCTTGCTGGGGCGCATCCATTCGGTTTTGAAGTTGATCAGTACCAAAACATTCCAACATTTACTGCTGCACGTATCTTTCGCCGAGTAGGTATTACACTCATGGCTATTCTGTTTGGTGTCCTTGTACTAACAGCGGTATTCCATTCCATAAAATTACCGGTAGGACAGCGATGGGGTAAACAAAGCTTTCTCCCCTGGCATTGTTCTTCAAACCAATATTATTGTCGAAACTTCTCACTTGCTGAGATGAAGTCTGCAACAAACAACTTCTGTCAAGGTTTTCTGATTGGCAGTGGTGGATTTGGGAAGGTCTACAAGGGTTATATAGGAGGTGCTGGCTACACTGCAACTACTATTGCTATAAAGCGTGCAAATCCCACTTCGAAGCAAGGCTTACATGAATTCCAAACAGAAATCACCATGCTCTCCAAGCTACGACACCACCACTTGGTTTCTTTGATTGGGTACTGCAAAGAGGACAAGGAAATGATACTTGTGTACGACTATATGGCGCAAGGTACGCTCCGTGATCATCTTTATGGTAAGTACCAGAAACCCCCACTTCCTTGGAAGCAGAGGATCAAGATATGTATAGGAGCAGCCCGAGGCCTGCACTATCTCCACACAGGGGCAAATGAAAAAATCATTCACCGGGATGTGAAGTCTAGTAACATATTGTTGGACAAAAATTTGGTGGCCAAAGTTTCAGATTTTGGATTGTCAAAAGTTGGCCCCGACCAGAATATGAATAGTGCCACTGGCCAATCATCAAATGGTGAGACTCCTCATGTTAGCACTGAAGTAAAGGGTAGTTTTGGATACCTGGACCCGGAATATTATCGAAGACAGAAACTGACCGAGAAATCAGACATTTATTCATTTGGGGTAGTGTTGTTTGAAGTTGTGTGTGCTAGGCCAGCTGTGATAAGCGTTGTAGAAAATGGGGAGCCAGAACAAGTAAACTTAAGTGAATGGGCACTTCAACATTGTAATCCTGGTCAGGAGGGGAAAGCAATTGATCACATCCTAGACCCGTCTCTATGGGGAAAGATCAATTCCGAGTCTCTGAAGACATTCACAGACATAGCAAGGCAATGTTTGACAGATAGGGGAAGTGAGCGGCCGTCGATGGGGGATGTGTTGTGGAAGTTGGAGCTGGCATTGCAGCAGCAAGAAAGAGCTGATCATCAAGTAGAAAACAATCGAATCGGCCCTAGTTTTCCTACAGAGATCGATGGTCATAAACAACAGGTCATTATTCAAGTTGGCATTTCAGATCCAACCCCAGGGCTCGAGTTTTCTGAGATGATGCTACCCACTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

824

Amino Acids

91.99

Weight (kDa)

6.54

Isoelectric Point (pI)

33.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 111 - 375 7.5e-17 Malectin-like domain
Malectin PF11721 199 - 340 2e-07 Malectin domain
Pkinase PF00069 476 - 762 3.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 477 - 708 1.6e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018027)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g29510
rosa_chinensis RchiOBHm_Chr4g0437771 RchiOBHm_Chr4g0437781
rosa_laevigata RLG00000006417
rosa_multiflora Rmu_sc0001538.1_g000005 Rmu_sc0001629.1_g000005
rosa_roxburghii Rroxscaffold_5G00378880
rosa_rugosa Rorug04G0303600
rosa_samantha Rh4BG366400 Rh4CG380500
rosa_wichuraiana Rw4G031390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 656
AccB1I GGYRCC 2 cut(s) 434, 472
AccB7I CCANNNNNTGG 1 cut(s) 1591
AccBSI CCGCTC 1 cut(s) 2263
AccI GTMKAC 3 cut(s) 777, 918, 1455
AccII CGCG 1 cut(s) 1039
AciI CCGC 4 cut(s) 612, 1039, 1277, 2263
AclWI GGATC 2 cut(s) 1730, 2414
AcoI YGGCCR 3 cut(s) 1839, 1903, 2264
AcsI RAATTY 3 cut(s) 371, 1544, 1831
AcuI CTGAAG 2 cut(s) 1962, 2231
AcvI CACGTG 1 cut(s) 406
AfaI GTAC 9 cut(s) 596, 737, 990, 1184, 1269, 1610, 1643, 1663, 1691
AfiI CCNNNNNNNGG 7 cut(s) 132, 789, 1591, 1771, 1972, 2273, 2429
AflII CTTAAG 1 cut(s) 2107
AflIII ACRYGT 1 cut(s) 403
AgeI ACCGGT 1 cut(s) 1300
AgsI TTSAA 9 cut(s) 224, 275, 716, 1120, 1172, 1353, 2042, 2126, 2405
AjnI CCWGG 9 cut(s) 205, 256, 430, 659, 788, 1337, 1965, 2137, 2428
Alw26I GTCTC 6 cut(s) 156, 530, 581, 1916, 2184, 2211
AlwI GGATC 2 cut(s) 1730, 2414
AlwNI CAGNNNCTG 1 cut(s) 1996
Ama87I CYCGRG 2 cut(s) 1746, 2435
AoxI GGCC 9 cut(s) 109, 614, 1750, 1839, 1873, 1903, 2057, 2264, 2353
ApeKI GCWGC 6 cut(s) 52, 652, 1208, 1742, 2308, 2311
ApoI RAATTY 3 cut(s) 371, 1544, 1831
AsiGI ACCGGT 1 cut(s) 1300
Asp700I GAANNNNTTC 1 cut(s) 2216
AspLEI GCGC 3 cut(s) 657, 1156, 1657
AsuC2I CCSGG 3 cut(s) 1021, 1796, 1973
AsuHPI GGTGA 3 cut(s) 1552, 1784, 1931
AsuII TTCGAA 2 cut(s) 46, 1526
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 2 cut(s) 1746, 2435
AvaII GGWCC 6 cut(s) 209, 260, 663, 748, 943, 1969
BaeGI GKGCMC 1 cut(s) 2122
BaeI ACNNNNGTAYC 4 cut(s) 229, 262, 1625, 1658
BalI TGGCCA 2 cut(s) 1841, 1905
BanI GGYRCC 2 cut(s) 434, 472
BanII GRGCYC 1 cut(s) 2436
BbrPI CACGTG 1 cut(s) 406
BbsI GAAGAC 4 cut(s) 403, 974, 1993, 2219
BbvCI CCTCAGC 1 cut(s) 939
BbvI GCAGC 6 cut(s) 64, 639, 1195, 1754, 2320, 2323
BccI CCATC 8 cut(s) 371, 427, 558, 632, 800, 1308, 2266, 2372
BceAI ACGGC 1 cut(s) 2251
BciT130I CCWGG 9 cut(s) 207, 258, 432, 661, 790, 1339, 1967, 2139, 2430
BciVI GTATCC 1 cut(s) 1955
BclI TGATCA 5 cut(s) 1084, 1177, 1672, 2161, 2326
BcnI CCSGG 3 cut(s) 1021, 1796, 1973
BcoDI GTCTC 6 cut(s) 156, 530, 581, 1916, 2184, 2211
BfmI CTRYAG 1 cut(s) 2367
BfrI CTTAAG 1 cut(s) 2107
BfuI GTATCC 1 cut(s) 1955
BisI GCNGC 7 cut(s) 53, 653, 1209, 1743, 2264, 2309, 2312
BlsI GCNGC 7 cut(s) 54, 654, 1210, 1744, 2265, 2310, 2313
Bme18I GGWCC 6 cut(s) 209, 260, 663, 748, 943, 1969
BmeT110I CYCGRG 2 cut(s) 1746, 2435
BmiI GGNNCC 7 cut(s) 262, 436, 474, 750, 1876, 1971, 2091
BmsI GCATC 5 cut(s) 160, 387, 639, 1165, 2442
BmtI GCTAGC 1 cut(s) 86
BpiI GAAGAC 4 cut(s) 403, 974, 1993, 2219
BpmI CTGGAG 1 cut(s) 240
Bpu10I CCTNAGC 1 cut(s) 939
Bpu14I TTCGAA 2 cut(s) 46, 1526
BpuEI CTTGAG 2 cut(s) 327, 605
BpuMI CCSGG 3 cut(s) 1021, 1796, 1973
Bsa29I ATCGAT 1 cut(s) 2376
BsaAI YACGTR 2 cut(s) 406, 1214
BsaBI GATNNNNATC 1 cut(s) 1086
BsaI GGTCTC 1 cut(s) 581
BsaJI CCNNGG 6 cut(s) 789, 1337, 1709, 1747, 2428, 2429
BsaWI WCCGGW 1 cut(s) 1300
Bsc4I CCNNNNNNNGG 7 cut(s) 132, 789, 1591, 1771, 1972, 2273, 2429
Bse118I RCCGGY 2 cut(s) 145, 1300
Bse1I ACTGG 6 cut(s) 280, 303, 767, 986, 1906, 2467
Bse3DI GCAATG 3 cut(s) 976, 2243, 2303
Bse8I GATNNNNATC 1 cut(s) 1086
BseBI CCWGG 9 cut(s) 207, 258, 432, 661, 790, 1339, 1967, 2139, 2430
BseCI ATCGAT 1 cut(s) 2376
BseDI CCNNGG 6 cut(s) 789, 1337, 1709, 1747, 2428, 2429
BseGI GGATG 6 cut(s) 122, 561, 1156, 1804, 2166, 2284
BseJI GATNNNNATC 1 cut(s) 1086
BseLI CCNNNNNNNGG 7 cut(s) 132, 789, 1591, 1771, 1972, 2273, 2429
BseMI GCAATG 3 cut(s) 976, 2243, 2303
BseMII CTCAG 9 cut(s) 35, 165, 636, 674, 756, 930, 1086, 1377, 2436
BseNI ACTGG 6 cut(s) 280, 303, 767, 986, 1906, 2467
BseRI GAGGAG 1 cut(s) 1917
BseSI GKGCMC 1 cut(s) 2122
BseX3I CGGCCG 1 cut(s) 2264
BseXI GCAGC 6 cut(s) 64, 639, 1195, 1754, 2320, 2323
BseYI CCCAGC 2 cut(s) 751, 1148
BsgI GTGCAG 3 cut(s) 747, 1194, 1739
Bsh1236I CGCG 1 cut(s) 1039
Bsh1285I CGRYCG 1 cut(s) 2267
BshFI GGCC 9 cut(s) 111, 616, 1752, 1841, 1875, 1905, 2059, 2266, 2355
BshNI GGYRCC 2 cut(s) 434, 472
BshTI ACCGGT 1 cut(s) 1300
BshVI ATCGAT 1 cut(s) 2376
BsiEI CGRYCG 1 cut(s) 2267
BsiHKCI CYCGRG 2 cut(s) 1746, 2435
BsiSI CCGG 5 cut(s) 146, 1020, 1301, 1795, 1973
BslFI GGGAC 3 cut(s) 236, 246, 734
BslI CCNNNNNNNGG 7 cut(s) 132, 789, 1591, 1771, 1972, 2273, 2429
BsmAI GTCTC 6 cut(s) 156, 530, 581, 1916, 2184, 2211
BsmBI CGTCTC 2 cut(s) 530, 2184
BsmFI GGGAC 3 cut(s) 236, 246, 734
BsmI GAATGC 3 cut(s) 13, 37, 54
BsnI GGCC 9 cut(s) 111, 616, 1752, 1841, 1875, 1905, 2059, 2266, 2355
Bso31I GGTCTC 1 cut(s) 581
BsoBI CYCGRG 2 cut(s) 1746, 2435
Bsp119I TTCGAA 2 cut(s) 46, 1526
Bsp1286I GDGCHC 2 cut(s) 2122, 2436
BspACI CCGC 4 cut(s) 612, 1039, 1277, 2263
BspANI GGCC 9 cut(s) 111, 616, 1752, 1841, 1875, 1905, 2059, 2266, 2355
BspCNI CTCAG 9 cut(s) 34, 166, 637, 675, 755, 931, 1085, 1378, 2437
BspDI ATCGAT 1 cut(s) 2376
BspFNI CGCG 1 cut(s) 1039
BspLI GGNNCC 7 cut(s) 262, 436, 474, 750, 1876, 1971, 2091
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 2 cut(s) 1730, 2414
BspT104I TTCGAA 2 cut(s) 46, 1526
BspT107I GGYRCC 2 cut(s) 434, 472
BspTI CTTAAG 1 cut(s) 2107
BspTNI GGTCTC 1 cut(s) 581
BsrBI CCGCTC 1 cut(s) 2263
BsrDI GCAATG 3 cut(s) 976, 2243, 2303
BsrFI RCCGGY 2 cut(s) 145, 1300
BsrI ACTGG 6 cut(s) 280, 303, 767, 986, 1906, 2467
BssAI RCCGGY 2 cut(s) 145, 1300
BssECI CCNNGG 6 cut(s) 789, 1337, 1709, 1747, 2428, 2429
BssNAI GTATAC 1 cut(s) 778
BssT1I CCWWGG 1 cut(s) 1709
Bst1107I GTATAC 1 cut(s) 778
Bst2UI CCWGG 9 cut(s) 207, 258, 432, 661, 790, 1339, 1967, 2139, 2430
Bst4CI ACNGT 1 cut(s) 107
BstAFI CTTAAG 1 cut(s) 2107
BstAPI GCANNNNNTGC 1 cut(s) 761
BstBAI YACGTR 2 cut(s) 406, 1214
BstBI TTCGAA 2 cut(s) 46, 1526
BstC8I GCNNGC 9 cut(s) 84, 360, 614, 1037, 1480, 1512, 1754, 2061, 2301
BstDEI CTNAG 9 cut(s) 21, 174, 645, 683, 742, 939, 1072, 1386, 2445
BstF5I GGATG 6 cut(s) 122, 561, 1156, 1804, 2166, 2284
BstFNI CGCG 1 cut(s) 1039
BstHHI GCGC 3 cut(s) 657, 1156, 1657
BstMAI GTCTC 6 cut(s) 156, 530, 581, 1916, 2184, 2211
BstMCI CGRYCG 1 cut(s) 2267
BstMWI GCNNNNNNNGC 7 cut(s) 17, 61, 761, 1573, 1663, 2060, 2305
BstNI CCWGG 9 cut(s) 207, 258, 432, 661, 790, 1339, 1967, 2139, 2430
BstNSI RCATGY 1 cut(s) 362
BstSFI CTRYAG 1 cut(s) 2367
BstSLI GKGCMC 1 cut(s) 2122
BstUI CGCG 1 cut(s) 1039
BstV1I GCAGC 6 cut(s) 64, 639, 1195, 1754, 2320, 2323
BstV2I GAAGAC 4 cut(s) 403, 974, 1993, 2219
BstX2I RGATCY 1 cut(s) 2419
BstXI CCANNNNNNTGG 1 cut(s) 1710
BstYI RGATCY 1 cut(s) 2419
BstZ17I GTATAC 1 cut(s) 778
BstZI CGGCCG 1 cut(s) 2264
Bsu15I ATCGAT 1 cut(s) 2376
BsuI GTATCC 1 cut(s) 1955
BsuRI GGCC 9 cut(s) 111, 616, 1752, 1841, 1875, 1905, 2059, 2266, 2355
BsuTUI ATCGAT 1 cut(s) 2376
BtgZI GCGATG 1 cut(s) 1327
BtsCI GGATG 6 cut(s) 122, 561, 1156, 1804, 2166, 2284
BtsI GCAGTG 3 cut(s) 759, 1441, 1485
BtsIMutI CAGTG 7 cut(s) 296, 759, 1441, 1485, 1899, 1938, 2460
Cac8I GCNNGC 9 cut(s) 84, 360, 614, 1037, 1480, 1512, 1754, 2061, 2301
CaiI CAGNNNCTG 1 cut(s) 1996
CfoI GCGC 3 cut(s) 657, 1156, 1657
Cfr10I RCCGGY 2 cut(s) 145, 1300
ClaI ATCGAT 1 cut(s) 2376
CsiI ACCWGGT 1 cut(s) 659
Csp6I GTAC 9 cut(s) 595, 736, 989, 1183, 1268, 1609, 1642, 1662, 1690
CspAI ACCGGT 1 cut(s) 1300
CviQI GTAC 9 cut(s) 595, 736, 989, 1183, 1268, 1609, 1642, 1662, 1690
DdeI CTNAG 9 cut(s) 21, 174, 645, 683, 742, 939, 1072, 1386, 2445
DraI TTTAAA 1 cut(s) 913
EaeI YGGCCR 3 cut(s) 1839, 1903, 2264
EagI CGGCCG 1 cut(s) 2264
EclXI CGGCCG 1 cut(s) 2264
Eco130I CCWWGG 1 cut(s) 1709
Eco147I AGGCCT 1 cut(s) 1752
Eco24I GRGCYC 1 cut(s) 2436
Eco31I GGTCTC 1 cut(s) 581
Eco47I GGWCC 6 cut(s) 209, 260, 663, 748, 943, 1969
Eco52I CGGCCG 1 cut(s) 2264
Eco57I CTGAAG 2 cut(s) 1962, 2231
Eco72I CACGTG 1 cut(s) 406
Eco88I CYCGRG 2 cut(s) 1746, 2435
EcoO109I RGGNCCY 2 cut(s) 260, 748
EcoRI GAATTC 2 cut(s) 371, 1544
EcoRII CCWGG 9 cut(s) 205, 256, 430, 659, 788, 1337, 1965, 2137, 2428
EcoT14I CCWWGG 1 cut(s) 1709
EcoT22I ATGCAT 1 cut(s) 445
EcoT38I GRGCYC 1 cut(s) 2436
ErhI CCWWGG 1 cut(s) 1709
Esp3I CGTCTC 2 cut(s) 530, 2184
FalI AAGNNNNNCTT 4 cut(s) 498, 530, 1520, 1552
FaqI GGGAC 3 cut(s) 236, 246, 734
FauI CCCGC 1 cut(s) 605
FbaI TGATCA 5 cut(s) 1084, 1177, 1672, 2161, 2326
FblI GTMKAC 3 cut(s) 777, 918, 1455
Fnu4HI GCNGC 7 cut(s) 53, 653, 1209, 1743, 2264, 2309, 2312
FokI GGATG 6 cut(s) 109, 548, 1143, 1811, 2153, 2291
FriOI GRGCYC 1 cut(s) 2436
Fsp4HI GCNGC 7 cut(s) 53, 653, 1209, 1743, 2264, 2309, 2312
FspI TGCGCA 1 cut(s) 656
GlaI GCGC 3 cut(s) 656, 1155, 1656
GluI GCNGC 7 cut(s) 53, 653, 1209, 1743, 2264, 2309, 2312
GsaI CCCAGC 2 cut(s) 755, 1152
GsuI CTGGAG 1 cut(s) 240
HaeIII GGCC 9 cut(s) 111, 616, 1752, 1841, 1875, 1905, 2059, 2266, 2355
HapII CCGG 5 cut(s) 146, 1020, 1301, 1795, 1973
HhaI GCGC 3 cut(s) 657, 1156, 1657
Hin6I GCGC 3 cut(s) 655, 1154, 1655
HinP1I GCGC 3 cut(s) 655, 1154, 1655
HincII GTYRAC 2 cut(s) 120, 604
HindII GTYRAC 2 cut(s) 120, 604
HindIII AAGCTT 2 cut(s) 62, 1327
HinfI GANTC 8 cut(s) 600, 836, 843, 1042, 1095, 1924, 2204, 2349
HpaII CCGG 5 cut(s) 146, 1020, 1301, 1795, 1973
HphI GGTGA 3 cut(s) 1552, 1784, 1931
Hpy99I CGWCG 3 cut(s) 611, 996, 2272
HpyAV CCTTC 2 cut(s) 524, 1444
HpyCH4III ACNGT 1 cut(s) 107
HpyCH4IV ACGT 5 cut(s) 384, 405, 606, 991, 1213
HpyF10VI GCNNNNNNNGC 7 cut(s) 17, 61, 761, 1573, 1663, 2060, 2305
HpyF3I CTNAG 9 cut(s) 21, 174, 645, 683, 742, 939, 1072, 1386, 2445
HpySE526I ACGT 5 cut(s) 384, 405, 606, 991, 1213
HspAI GCGC 3 cut(s) 655, 1154, 1655
Ksp22I TGATCA 5 cut(s) 1084, 1177, 1672, 2161, 2326
LmnI GCTCC 7 cut(s) 188, 966, 974, 1671, 1739, 2089, 2296
Lsp1109I GCAGC 6 cut(s) 64, 639, 1195, 1754, 2320, 2323
LweI GCATC 5 cut(s) 160, 387, 639, 1165, 2442
MabI ACCWGGT 1 cut(s) 659
MaeII ACGT 5 cut(s) 384, 405, 606, 991, 1213
MaeIII GTNAC 2 cut(s) 406, 1811
MbiI CCGCTC 1 cut(s) 2263
MboII GAAGA 8 cut(s) 408, 704, 898, 974, 1108, 1341, 1998, 2224
MfeI CAATTG 1 cut(s) 2157
MflI RGATCY 1 cut(s) 2419
MhlI GDGCHC 2 cut(s) 2122, 2436
MlsI TGGCCA 2 cut(s) 1841, 1905
MluCI AATT 9 cut(s) 275, 371, 519, 729, 1295, 1544, 1831, 2157, 2197
MluNI TGGCCA 2 cut(s) 1841, 1905
MlyI GAGTC 3 cut(s) 609, 1918, 2213
MmeI TCCRAC 5 cut(s) 314, 1220, 1803, 2274, 2447
Mox20I TGGCCA 2 cut(s) 1841, 1905
Mph1103I ATGCAT 1 cut(s) 445
MroXI GAANNNNTTC 1 cut(s) 2216
MscI TGGCCA 2 cut(s) 1841, 1905
MseI TTAA 5 cut(s) 732, 891, 912, 1100, 2108
MslI CAYNNNNRTG 3 cut(s) 951, 1680, 1797
Msp20I TGGCCA 2 cut(s) 1841, 1905
MspA1I CMGCKG 3 cut(s) 938, 1277, 2063
MspCI CTTAAG 1 cut(s) 2107
MspI CCGG 5 cut(s) 146, 1020, 1301, 1795, 1973
MunI CAATTG 1 cut(s) 2157
Mva1269I GAATGC 3 cut(s) 13, 37, 54
MvaI CCWGG 9 cut(s) 207, 258, 432, 661, 790, 1339, 1967, 2139, 2430
MvnI CGCG 1 cut(s) 1039
MwoI GCNNNNNNNGC 7 cut(s) 17, 61, 761, 1573, 1663, 2060, 2305
NciI CCSGG 3 cut(s) 1021, 1796, 1973
NheI GCTAGC 1 cut(s) 82
NlaIV GGNNCC 7 cut(s) 262, 436, 474, 750, 1876, 1971, 2091
NmeAIII GCCGAG 1 cut(s) 1250
NmuCI GTSAC 1 cut(s) 406
NsbI TGCGCA 1 cut(s) 656
NsiI ATGCAT 1 cut(s) 445
NspI RCATGY 1 cut(s) 362
NspV TTCGAA 2 cut(s) 46, 1526
PaeI GCATGC 1 cut(s) 362
PaeR7I CTCGAG 1 cut(s) 2435
PasI CCCWGGG 1 cut(s) 2429
PceI AGGCCT 1 cut(s) 1752
PctI GAATGC 3 cut(s) 13, 37, 54
PdmI GAANNNNTTC 1 cut(s) 2216
PfeI GAWTC 5 cut(s) 836, 843, 1042, 1095, 2349
PflMI CCANNNNNTGG 1 cut(s) 1591
PinAI ACCGGT 1 cut(s) 1300
PkrI GCNGC 7 cut(s) 54, 654, 1210, 1744, 2265, 2310, 2313
PleI GAGTC 3 cut(s) 608, 1918, 2212
PmaCI CACGTG 1 cut(s) 406
PmlI CACGTG 1 cut(s) 406
PpsI GAGTC 3 cut(s) 608, 1918, 2212
Ppu21I YACGTR 2 cut(s) 406, 1214
PpuMI RGGWCCY 2 cut(s) 260, 748
Psp5II RGGWCCY 2 cut(s) 260, 748
Psp6I CCWGG 9 cut(s) 205, 256, 430, 659, 788, 1337, 1965, 2137, 2428
PspCI CACGTG 1 cut(s) 406
PspFI CCCAGC 2 cut(s) 751, 1148
PspGI CCWGG 9 cut(s) 205, 256, 430, 659, 788, 1337, 1965, 2137, 2428
PspN4I GGNNCC 7 cut(s) 262, 436, 474, 750, 1876, 1971, 2091
PspPPI RGGWCCY 2 cut(s) 260, 748
PspXI VCTCGAGB 1 cut(s) 2435
PsrI GAACNNNNNNTAC 2 cut(s) 221, 253
PstNI CAGNNNCTG 1 cut(s) 1996
PsuI RGATCY 1 cut(s) 2419
PvuII CAGCTG 2 cut(s) 938, 2063
RsaI GTAC 9 cut(s) 596, 737, 990, 1184, 1269, 1610, 1643, 1663, 1691
RsaNI GTAC 9 cut(s) 595, 736, 989, 1183, 1268, 1609, 1642, 1662, 1690
RseI CAYNNNNRTG 3 cut(s) 951, 1680, 1797
SaqAI TTAA 5 cut(s) 732, 891, 912, 1100, 2108
SatI GCNGC 7 cut(s) 53, 653, 1209, 1743, 2264, 2309, 2312
SchI GAGTC 3 cut(s) 609, 1918, 2213
SduI GDGCHC 2 cut(s) 2122, 2436
SexAI ACCWGGT 1 cut(s) 659
SfaNI GCATC 5 cut(s) 160, 387, 639, 1165, 2442
SfcI CTRYAG 1 cut(s) 2367
Sfr274I CTCGAG 1 cut(s) 2435
SfuI TTCGAA 2 cut(s) 46, 1526
SinI GGWCC 6 cut(s) 209, 260, 663, 748, 943, 1969
SlaI CTCGAG 1 cut(s) 2435
SmiMI CAYNNNNRTG 3 cut(s) 951, 1680, 1797
SmlI CTYRAG 4 cut(s) 342, 584, 2107, 2435
SmoI CTYRAG 4 cut(s) 342, 584, 2107, 2435
SphI GCATGC 1 cut(s) 362
Sse9I AATT 9 cut(s) 275, 371, 519, 729, 1295, 1544, 1831, 2157, 2197
SseBI AGGCCT 1 cut(s) 1752
SsiI CCGC 4 cut(s) 612, 1039, 1277, 2263
SspI AATATT 2 cut(s) 1361, 1979
StuI AGGCCT 1 cut(s) 1752
StyI CCWWGG 1 cut(s) 1709
TaaI ACNGT 1 cut(s) 107
TaiI ACGT 5 cut(s) 387, 408, 609, 994, 1216
TaqII GACCGA 1 cut(s) 2015
TasI AATT 9 cut(s) 275, 371, 519, 729, 1295, 1544, 1831, 2157, 2197
TatI WGTACW 2 cut(s) 735, 1267
TauI GCSGC 1 cut(s) 2266
TfiI GAWTC 5 cut(s) 836, 843, 1042, 1095, 2349
Tru1I TTAA 5 cut(s) 732, 891, 912, 1100, 2108
Tru9I TTAA 5 cut(s) 732, 891, 912, 1100, 2108
TscAI CASTG 7 cut(s) 303, 766, 1441, 1492, 1906, 1945, 2467
TseFI GTSAC 1 cut(s) 406
TseI GCWGC 6 cut(s) 52, 652, 1208, 1742, 2308, 2311
Tsp45I GTSAC 1 cut(s) 406
TspDTI ATGAA 9 cut(s) 44, 519, 610, 854, 1406, 1557, 1794, 1904, 2010
TspGWI ACGGA 1 cut(s) 1658
TspRI CASTG 7 cut(s) 303, 766, 1441, 1492, 1906, 1945, 2467
Van91I CCANNNNNTGG 1 cut(s) 1591
Vha464I CTTAAG 1 cut(s) 2107
VpaK11BI GGWCC 6 cut(s) 209, 260, 663, 748, 943, 1969
XapI RAATTY 3 cut(s) 371, 1544, 1831
XbaI TCTAGA 2 cut(s) 139, 634
XceI RCATGY 1 cut(s) 362
XcmI CCANNNNNNNNNTGG 1 cut(s) 1913
XhoI CTCGAG 1 cut(s) 2435
XmiI GTMKAC 3 cut(s) 777, 918, 1455
XmnI GAANNNNTTC 1 cut(s) 2216
Zsp2I ATGCAT 1 cut(s) 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.