FvH4_4g29570

Nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0011043
Physical Location & Seq
Reverse (-)
29647187 .. 29652950
5764 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29570.t1

Sequence Viewer

Length: 2862 bp
ATGGCGAAGCTGAAGTCCGGCCCACGCGCCGCATCCATGAAGCACCAGTCCCCCAAACCAAACCCCTTCGCCGGCAAATTGCCAAAGCTCAGTCGCTCCGACGACAACAGCACCGCGAAGGAGACGAAGAAGAAGAAGAAAAGTAAACTAGGACCGAAAGCGGCGGCTATGAAGGTCCAGCCGCCGAAGCCCAACCCCTTCGAGACCATTTGGTCCCGGCGGAAATTCGACGTCCTCGGCAAAAAGCGCAAAGGCGAAGAGCGCCGTGTCGGCCTTGCTCGCTCTCAGGCCATCGAAAAGAGGAAGAAGACATTGCTGAAGGAGTATGAGAAGAGCGGTAAATCTTCGGTGTTTGTGGATAAGCGAATCGGAGAGGGAAATGATGAGCTTGATGAGTTTGATAAGGCCATTCGGCGTACCCAGCGTGAGCGTCAACTGAAGCAAAGCAAGAAGAGCAAGTATAACTTGTCAGATGGCGAAGACGACGAGTTTGAGTTTCAGAGTCTTGGTGCATTGTCTCAGAGGGATGATTTTGAGGATGATATGCCGCAGGAAGATGACGAAGATGATGATGGTGGAGAAACTGCTAAAAAAAGATATCAATTTAATTCTGATGATAAGGACGGGGATTTAAGTGACGGAAATGAAAATAGGCATAAAAGTGACAAGGAAAGATATGCTGAGATGATATTGAAGTCCAAAAATTATAAGTTTGAAAAGTCGAAGGAGAAGGATGAAAACAAAGATTTGATGGAAGAATTGGACAAAAAGTTTACCTCTGTAATTGCCTCGAAAGCTCTTATAGACAAAAGCATTAAGCATGAGGTTTCTGCTACTCAGATCTTTGGAACTTCTGAGCAGGAGAAATCTGACGCTTATGATAAACTTGAAAGAGAATTGGCAATGGAAAGGCGTGCTCAACCCTCGAGTAGGACCAAGACGCCTGAAGAGATAGCACAAGAAGAGAGGGAGCAACTAGAACAATTGGAGGAAGAGAGGCAGAAAAGGATGCATCCCACTGATGACTATAGTGATGAAGACAATGAAGATGCTGAGAAACCATCTACCCTGAGGCTGAGAGCTATATCTGGAGATGATCTTGGTGATTCTTTCTCGCTCGAGGAAGAACCAAGGAATAAAAAGGGTTGGGTTGATGAGATTCTCGAACGAAGAGATGCTGGTGATTCTGAGAGTGAAGGAGATGATTCTGATTCTTCTGAGGGTTCAGAAAGTCCTGAAGATGATGGTGTTGAGGGTTCTGATGAAGATGATAGTGAAGGGGAAAGAGATCTATTGAATAAGGAGTGGGAACAAAGTGATGATGATAATCTTGACTTAGACTTGGATGATGAAGAAGAAGACTCTGACGAACATGAAAATGGTGATGATGATGCTGATCAAAAAGAGGTGGAGCAAAGACATCTGAAAAAGTTGAAAAGAAATGATGCTGTTCAAGCTAGTAAGAGTGATGGTAAATCTTTAGATGCCAAAAAATTGCCAGCCAATAAACAATCTTTAACTCAGTCAGACCTCCCATACCTAATTGAAGCTCCGAAAAGCATGGAAGAGTTGGATGCATTATTGGATAATCTTTCTAATGCTGACATTGCCTTGATAATCCATCGAATCCGGGCAAGCAATGCAATCAAGCTTGCAGCTGAAAATAAGAAGAAAATGCAAGTGTTTTATGGTTTACTTTTGCAATATTTTGCCACCTTGGCAAATAAAAAACCGCTAAATTTGGAATTACTGAATTTGCTGGTTAAGCCGTTGATGGAGATGAGCATGGAGACTCCGTATTTTGCTTCAATCTGTGCTCGTGAGAGAATACTACGCACCAGAACAAAATTTTGTGAGACTGTGAAGAACCCAGAAGAAAGTAGTTGTTGGCCTGCTTCAAAGACATTGTTTCTCCTGAGGCTTTGGTCCCTGATATTTCCATGTTCAGACTTTCGTCATGTGGTCATGACTCCAGCAATATTTTTAATGTGTGAATATCTGACGCGTTGTCCCATCTTATCTGGTCGTGATGTTGCAGTCGGCTTGTTCTTATGCTCTCTGCTTCTCTCTATCACTAAACAATCTCGGAAGTTCTGTCCCGAAGCAGTCACATTTCTTCAAACATTGTTAATGGCGGCCAAAGAGAGAAAACCAAAGCCTACTCAAGATTCTGAGATTGATCATCTTATGGAACTAAAAGCACCCAGACCCCTTTTACTTATACATGAATGTATAAATCAGATCGATCCACTTAATTTTCTCACAATTATGGACCTGCCAGAAGACTCGTCATTTTTCACCTCCAACAATTTCAGGTCTAGTGTGCTGGTGACTGTAATTGAAACTCTACGTGGATATGTCAATATCTACGAAGGATTCAGTTCTTTCCCCGAAATCTTTTTGCCGATTTCAACATTGGTTCTTGAATTGTCGGAACAAGAAAATATGCCAAGTGCATTAACTGATAAATTTAAAGAGGTTGCTCAACTGATCAAGACAAAAGCAGATAAACACTGCTTGCGGCGGCAACCACTTCAGATGCGGAAGCAAAAGCCAGTGGCTATCAAAATGCTCAATCCAAAATTTGAGGAGAACTTTGTCAAGGGCAGAGACTACGATCCAGACCGTGAACGGGTTGAGAGAAAGAAGTTGAAGAAGCGTTTGACACAAGAAGCTAAAGGTGCTGTCCGTGAACTGCGTAAAGATAATTATTTCTTGCAGGAGGTGAAGTCGAGGGATAAGGCTTTGATGGAACAAGAGAGAGCTGAGAAATATGGAAAAGCAAGACTTTTCCTTCAAGAGCAAGAACATGCTATGAAATCTGGGCAATTAGGAAAAGGCAAGGGGAGGAGAAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop14

Protein Analysis

954

Amino Acids

109.58

Weight (kDa)

5.59

Isoelectric Point (pI)

53.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop14 PF04147 63 - 937 4.2e-230 Nop14-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69070 AT1G69070
fragaria_vesca FvH4_4g29570 FvH4_4g29570 FvH4_4g29570
malus_domestica MD13G1058900.v1.1 MD16G1058200.v1.1
prunus_persica Prupe.1G290900_v2.0.a1
pyrus_communis pycom16g05090
rosa_chinensis RchiOBHm_Chr4g0437801
rosa_laevigata RLG00000006412
rosa_multiflora Rmu_sc0004193.1_g000019
rosa_roxburghii Rroxscaffold_5G00378900
rosa_rugosa Rorug04G0303800 Rorug04G0303800
rosa_samantha Rh4AG356100 Rh4BG366700 Rh4CG380700 Rh4DG361200
rosa_wichuraiana Rw4G031410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 708
AasI GACNNNNNNGTC 1 cut(s) 211
AatII GACGTC 1 cut(s) 234
Acc36I ACCTGC 1 cut(s) 2283
AccBSI CCGCTC 1 cut(s) 336
AccII CGCG 3 cut(s) 27, 116, 2005
AclWI GGATC 2 cut(s) 2240, 2612
AcoI YGGCCR 1 cut(s) 2136
AcsI RAATTY 6 cut(s) 224, 1738, 1753, 1847, 2468, 2582
AcuI CTGAAG 6 cut(s) 32, 338, 458, 966, 1257, 2519
AcyI GRCGYC 2 cut(s) 231, 941
AfaI GTAC 1 cut(s) 418
AfiI CCNNNNNNNGG 3 cut(s) 71, 930, 2632
AflIII ACRYGT 1 cut(s) 2003
AhdI GACNNNNNGTC 1 cut(s) 2007
Alw21I GWGCWC 2 cut(s) 919, 1819
Alw26I GTCTC 6 cut(s) 116, 197, 522, 1784, 1850, 2604
AlwI GGATC 2 cut(s) 2240, 2612
Ama87I CYCGRG 2 cut(s) 925, 1118
AoxI GGCC 6 cut(s) 19, 271, 288, 405, 1889, 2136
ApeKI GCWGC 1 cut(s) 1655
ApoI RAATTY 6 cut(s) 224, 1738, 1753, 1847, 2468, 2582
ArsI GACNNNNNNTTYG 3 cut(s) 31, 473, 505
AspLEI GCGC 3 cut(s) 29, 249, 264
AspS9I GGNCC 7 cut(s) 20, 152, 175, 213, 933, 1926, 2272
AsuC2I CCSGG 2 cut(s) 217, 1631
AsuHPI GGTGA 6 cut(s) 1115, 1193, 1394, 2290, 2341, 2737
AvaI CYCGRG 2 cut(s) 925, 1118
AvaII GGWCC 6 cut(s) 152, 175, 213, 933, 1926, 2272
AxyI CCTNAGG 2 cut(s) 1070, 1916
BauI CACGAG 1 cut(s) 1818
BbsI GAAGAC 5 cut(s) 314, 486, 1044, 1365, 2289
Bbv12I GWGCWC 2 cut(s) 919, 1819
BbvI GCAGC 1 cut(s) 1667
BceAI ACGGC 2 cut(s) 249, 1753
BclI TGATCA 3 cut(s) 1396, 2179, 2490
BcnI CCSGG 2 cut(s) 217, 1631
BcoDI GTCTC 6 cut(s) 116, 197, 522, 1784, 1850, 2604
BfaI CTAG 4 cut(s) 149, 977, 1458, 2319
BfmI CTRYAG 1 cut(s) 1027
BfoI RGCGCY 1 cut(s) 265
BfuAI ACCTGC 1 cut(s) 2283
BglI GCCNNNNNGGC 2 cut(s) 270, 1718
BglII AGATCT 2 cut(s) 840, 1288
BisI GCNGC 9 cut(s) 30, 162, 165, 182, 548, 1656, 2136, 2522, 2525
BlsI GCNGC 9 cut(s) 31, 163, 166, 183, 549, 1657, 2137, 2523, 2526
Bme1390I CCNGG 2 cut(s) 217, 1631
Bme18I GGWCC 6 cut(s) 152, 175, 213, 933, 1926, 2272
BmeRI GACNNNNNGTC 1 cut(s) 2007
BmeT110I CYCGRG 2 cut(s) 925, 1118
BmgT120I GGNCC 7 cut(s) 20, 152, 175, 213, 933, 1926, 2272
BmiI GGNNCC 2 cut(s) 215, 1928
BmrFI CCNGG 2 cut(s) 217, 1631
BoxI GACNNNNGTC 1 cut(s) 1953
BpiI GAAGAC 5 cut(s) 314, 486, 1044, 1365, 2289
BpmI CTGGAG 2 cut(s) 1110, 1956
BpuEI CTTGAG 1 cut(s) 2148
BpuMI CCSGG 2 cut(s) 217, 1631
Bsa29I ATCGAT 1 cut(s) 2244
BsaAI YACGTR 1 cut(s) 2351
BsaBI GATNNNNATC 2 cut(s) 1326, 1395
BsaHI GRCGYC 2 cut(s) 231, 941
BsaI GGTCTC 1 cut(s) 197
BsaJI CCNNGG 3 cut(s) 235, 1130, 1716
BsaXI ACNNNNNCTCC 4 cut(s) 1781, 1811, 2714, 2744
Bsc4I CCNNNNNNNGG 3 cut(s) 71, 930, 2632
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 2 cut(s) 46, 2555
Bse21I CCTNAGG 2 cut(s) 1070, 1916
Bse3DI GCAATG 4 cut(s) 311, 909, 1605, 1645
Bse8I GATNNNNATC 2 cut(s) 1326, 1395
BseCI ATCGAT 1 cut(s) 2244
BseDI CCNNGG 3 cut(s) 235, 1130, 1716
BseGI GGATG 8 cut(s) 32, 532, 544, 739, 1012, 1014, 1351, 1579
BseJI GATNNNNATC 2 cut(s) 1326, 1395
BseLI CCNNNNNNNGG 3 cut(s) 71, 930, 2632
BseMI GCAATG 4 cut(s) 311, 909, 1605, 1645
BseNI ACTGG 2 cut(s) 46, 2555
BseRI GAGGAG 1 cut(s) 2603
BseXI GCAGC 1 cut(s) 1667
BseYI CCCAGC 1 cut(s) 420
Bsh1236I CGCG 3 cut(s) 27, 116, 2005
BshFI GGCC 6 cut(s) 21, 273, 290, 407, 1891, 2138
BshVI ATCGAT 1 cut(s) 2244
BsiHKAI GWGCWC 2 cut(s) 919, 1819
BsiHKCI CYCGRG 2 cut(s) 925, 1118
BsiSI CCGG 4 cut(s) 18, 72, 217, 1630
BslFI GGGAC 5 cut(s) 34, 199, 1912, 1995, 2082
BslI CCNNNNNNNGG 3 cut(s) 71, 930, 2632
BsmAI GTCTC 6 cut(s) 116, 197, 522, 1784, 1850, 2604
BsmBI CGTCTC 1 cut(s) 116
BsmFI GGGAC 5 cut(s) 34, 199, 1912, 1995, 2082
BsnI GGCC 6 cut(s) 21, 273, 290, 407, 1891, 2138
Bso31I GGTCTC 1 cut(s) 197
BsoBI CYCGRG 2 cut(s) 925, 1118
Bsp1286I GDGCHC 2 cut(s) 919, 1819
Bsp143I GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
BspANI GGCC 6 cut(s) 21, 273, 290, 407, 1891, 2138
BspDI ATCGAT 1 cut(s) 2244
BspFNI CGCG 3 cut(s) 27, 116, 2005
BspHI TCATGA 1 cut(s) 1965
BspLI GGNNCC 2 cut(s) 215, 1928
BspMI ACCTGC 1 cut(s) 2283
BspPI GGATC 2 cut(s) 2240, 2612
BspQI GCTCTTC 3 cut(s) 252, 326, 446
BspTNI GGTCTC 1 cut(s) 197
BsrBI CCGCTC 1 cut(s) 336
BsrDI GCAATG 4 cut(s) 311, 909, 1605, 1645
BsrFI RCCGGY 1 cut(s) 71
BsrI ACTGG 2 cut(s) 46, 2555
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 3 cut(s) 235, 1130, 1716
BssMI GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
BssNI GRCGYC 2 cut(s) 231, 941
BssSI CACGAG 1 cut(s) 1818
BssT1I CCWWGG 2 cut(s) 1130, 1716
Bst2BI CACGAG 1 cut(s) 1818
Bst4CI ACNGT 3 cut(s) 1861, 2335, 2627
Bst6I CTCTTC 8 cut(s) 252, 326, 446, 942, 957, 987, 1165, 1560
BstACI GRCGYC 2 cut(s) 231, 941
BstAPI GCANNNNNTGC 1 cut(s) 1640
BstBAI YACGTR 1 cut(s) 2351
BstC8I GCNNGC 8 cut(s) 73, 280, 915, 1500, 1636, 1653, 1893, 2519
BstENI CCTNNNNNAGG 1 cut(s) 928
BstF5I GGATG 8 cut(s) 32, 532, 544, 739, 1012, 1014, 1351, 1579
BstFNI CGCG 3 cut(s) 27, 116, 2005
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 3 cut(s) 29, 249, 264
BstKTI GATC 9 cut(s) 843, 1099, 1291, 1399, 2182, 2244, 2248, 2493, 2620
BstMAI GTCTC 6 cut(s) 116, 197, 522, 1784, 1850, 2604
BstMBI GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
BstNSI RCATGY 1 cut(s) 2813
BstPAI GACNNNNGTC 1 cut(s) 1953
BstSCI CCNGG 2 cut(s) 215, 1629
BstSFI CTRYAG 1 cut(s) 1027
BstUI CGCG 3 cut(s) 27, 116, 2005
BstV1I GCAGC 1 cut(s) 1667
BstV2I GAAGAC 5 cut(s) 314, 486, 1044, 1365, 2289
BstX2I RGATCY 2 cut(s) 840, 1288
BstYI RGATCY 2 cut(s) 840, 1288
Bsu15I ATCGAT 1 cut(s) 2244
Bsu36I CCTNAGG 2 cut(s) 1070, 1916
BsuRI GGCC 6 cut(s) 21, 273, 290, 407, 1891, 2138
BsuTUI ATCGAT 1 cut(s) 2244
BtsCI GGATG 8 cut(s) 32, 532, 544, 739, 1012, 1014, 1351, 1579
BtsI GCAGTG 1 cut(s) 2512
BtsIMutI CAGTG 3 cut(s) 1017, 2512, 2562
BveI ACCTGC 1 cut(s) 2283
Cac8I GCNNGC 8 cut(s) 73, 280, 915, 1500, 1636, 1653, 1893, 2519
CciI TCATGA 1 cut(s) 1965
CfoI GCGC 3 cut(s) 29, 249, 264
Cfr10I RCCGGY 1 cut(s) 71
Cfr13I GGNCC 7 cut(s) 20, 152, 175, 213, 933, 1926, 2272
ClaI ATCGAT 1 cut(s) 2244
CseI GACGC 4 cut(s) 419, 881, 949, 2011
Csp6I GTAC 1 cut(s) 417
CviQI GTAC 1 cut(s) 417
DpnI GATC 9 cut(s) 842, 1098, 1290, 1398, 2181, 2243, 2247, 2492, 2619
DpnII GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
DraI TTTAAA 1 cut(s) 2473
DrdI GACNNNNNNGTC 1 cut(s) 211
DriI GACNNNNNGTC 1 cut(s) 2007
DseDI GACNNNNNNGTC 1 cut(s) 211
EaeI YGGCCR 1 cut(s) 2136
Eam1104I CTCTTC 8 cut(s) 252, 326, 446, 942, 957, 987, 1165, 1560
Eam1105I GACNNNNNGTC 1 cut(s) 2007
EarI CTCTTC 8 cut(s) 252, 326, 446, 942, 957, 987, 1165, 1560
EciI GGCGGA 1 cut(s) 235
Eco130I CCWWGG 2 cut(s) 1130, 1716
Eco31I GGTCTC 1 cut(s) 197
Eco32I GATATC 1 cut(s) 599
Eco47I GGWCC 6 cut(s) 152, 175, 213, 933, 1926, 2272
Eco57I CTGAAG 6 cut(s) 32, 338, 458, 966, 1257, 2519
Eco81I CCTNAGG 2 cut(s) 1070, 1916
Eco88I CYCGRG 2 cut(s) 925, 1118
EcoNI CCTNNNNNAGG 1 cut(s) 928
EcoRV GATATC 1 cut(s) 599
EcoT14I CCWWGG 2 cut(s) 1130, 1716
EcoT22I ATGCAT 2 cut(s) 1014, 1579
ErhI CCWWGG 2 cut(s) 1130, 1716
Esp3I CGTCTC 1 cut(s) 116
FalI AAGNNNNNCTT 4 cut(s) 449, 481, 2772, 2804
FaqI GGGAC 5 cut(s) 34, 199, 1912, 1995, 2082
FbaI TGATCA 3 cut(s) 1396, 2179, 2490
Fnu4HI GCNGC 9 cut(s) 30, 162, 165, 182, 548, 1656, 2136, 2522, 2525
FokI GGATG 8 cut(s) 19, 539, 551, 746, 999, 1021, 1358, 1586
Fsp4HI GCNGC 9 cut(s) 30, 162, 165, 182, 548, 1656, 2136, 2522, 2525
FspBI CTAG 4 cut(s) 149, 977, 1458, 2319
GlaI GCGC 3 cut(s) 28, 248, 263
GluI GCNGC 9 cut(s) 30, 162, 165, 182, 548, 1656, 2136, 2522, 2525
GsaI CCCAGC 1 cut(s) 424
GsuI CTGGAG 2 cut(s) 1110, 1956
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 6 cut(s) 21, 273, 290, 407, 1891, 2138
HapII CCGG 4 cut(s) 18, 72, 217, 1630
HgaI GACGC 4 cut(s) 419, 881, 949, 2011
HhaI GCGC 3 cut(s) 29, 249, 264
Hin1I GRCGYC 2 cut(s) 231, 941
Hin6I GCGC 3 cut(s) 27, 247, 262
HinP1I GCGC 3 cut(s) 27, 247, 262
HincII GTYRAC 1 cut(s) 434
HindII GTYRAC 1 cut(s) 434
HindIII AAGCTT 1 cut(s) 1649
HpaII CCGG 4 cut(s) 18, 72, 217, 1630
HphI GGTGA 6 cut(s) 1115, 1193, 1394, 2290, 2341, 2737
Hpy166II GTNNAC 6 cut(s) 146, 434, 774, 1694, 2630, 2693
Hpy8I GTNNAC 6 cut(s) 146, 434, 774, 1694, 2630, 2693
Hpy99I CGWCG 3 cut(s) 104, 233, 488
HpyCH4III ACNGT 3 cut(s) 1861, 2335, 2627
HpyCH4IV ACGT 2 cut(s) 231, 2350
HpySE526I ACGT 2 cut(s) 231, 2350
Hsp92I GRCGYC 2 cut(s) 231, 941
HspAI GCGC 3 cut(s) 27, 247, 262
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
Ksp22I TGATCA 3 cut(s) 1396, 2179, 2490
Kzo9I GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
LguI GCTCTTC 3 cut(s) 252, 326, 446
LmnI GCTCC 4 cut(s) 101, 970, 1411, 1555
Lsp1109I GCAGC 1 cut(s) 1667
MaeI CTAG 4 cut(s) 149, 977, 1458, 2319
MaeII ACGT 2 cut(s) 231, 2350
MaeIII GTNAC 4 cut(s) 635, 662, 2107, 2329
MalI GATC 9 cut(s) 842, 1098, 1290, 1398, 2181, 2243, 2247, 2492, 2619
MbiI CCGCTC 1 cut(s) 336
MboI GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
MfeI CAATTG 1 cut(s) 983
MflI RGATCY 2 cut(s) 840, 1288
MhlI GDGCHC 2 cut(s) 919, 1819
MluI ACGCGT 1 cut(s) 2003
MlyI GAGTC 5 cut(s) 511, 1355, 1786, 1963, 2279
MmeI TCCRAC 4 cut(s) 123, 1551, 2328, 2412
Mph1103I ATGCAT 2 cut(s) 1014, 1579
MroNI GCCGGC 1 cut(s) 71
MslI CAYNNNNRTG 3 cut(s) 660, 1377, 2267
MspA1I CMGCKG 1 cut(s) 1658
MspI CCGG 4 cut(s) 18, 72, 217, 1630
MspR9I CCNGG 2 cut(s) 217, 1631
MunI CAATTG 1 cut(s) 983
MvnI CGCG 3 cut(s) 27, 116, 2005
NaeI GCCGGC 1 cut(s) 73
NciI CCSGG 2 cut(s) 217, 1631
NdeII GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
NgoMIV GCCGGC 1 cut(s) 71
NlaIV GGNNCC 2 cut(s) 215, 1928
NmeAIII GCCGAG 1 cut(s) 216
NmuCI GTSAC 4 cut(s) 635, 662, 2107, 2329
NsiI ATGCAT 2 cut(s) 1014, 1579
NspI RCATGY 1 cut(s) 2813
PaeR7I CTCGAG 2 cut(s) 925, 1118
PagI TCATGA 1 cut(s) 1965
PciSI GCTCTTC 3 cut(s) 252, 326, 446
PdiI GCCGGC 1 cut(s) 73
PfeI GAWTC 9 cut(s) 366, 1106, 1159, 1184, 1205, 1211, 1626, 2168, 2376
PkrI GCNGC 9 cut(s) 31, 163, 166, 183, 549, 1657, 2137, 2523, 2526
PleI GAGTC 5 cut(s) 510, 1355, 1786, 1963, 2279
PpsI GAGTC 5 cut(s) 510, 1355, 1786, 1963, 2279
Ppu21I YACGTR 1 cut(s) 2351
PshAI GACNNNNGTC 1 cut(s) 1953
PsiI TTATAA 1 cut(s) 708
PspFI CCCAGC 1 cut(s) 420
PspN4I GGNNCC 2 cut(s) 215, 1928
PspPI GGNCC 7 cut(s) 20, 152, 175, 213, 933, 1926, 2272
PspXI VCTCGAGB 2 cut(s) 925, 1118
PsuI RGATCY 2 cut(s) 840, 1288
PvuII CAGCTG 1 cut(s) 1658
RsaI GTAC 1 cut(s) 418
RsaNI GTAC 1 cut(s) 417
RseI CAYNNNNRTG 3 cut(s) 660, 1377, 2267
SapI GCTCTTC 3 cut(s) 252, 326, 446
SatI GCNGC 9 cut(s) 30, 162, 165, 182, 548, 1656, 2136, 2522, 2525
Sau3AI GATC 9 cut(s) 840, 1096, 1288, 1396, 2179, 2241, 2245, 2490, 2617
Sau96I GGNCC 7 cut(s) 20, 152, 175, 213, 933, 1926, 2272
SchI GAGTC 5 cut(s) 511, 1355, 1786, 1963, 2279
ScrFI CCNGG 2 cut(s) 217, 1631
SduI GDGCHC 2 cut(s) 919, 1819
SfcI CTRYAG 1 cut(s) 1027
Sfr274I CTCGAG 2 cut(s) 925, 1118
SinI GGWCC 6 cut(s) 152, 175, 213, 933, 1926, 2272
SlaI CTCGAG 2 cut(s) 925, 1118
SmiMI CAYNNNNRTG 3 cut(s) 660, 1377, 2267
SmlI CTYRAG 3 cut(s) 925, 1118, 2163
SmoI CTYRAG 3 cut(s) 925, 1118, 2163
SspI AATATT 2 cut(s) 1706, 1980
SspMI CTAG 4 cut(s) 149, 977, 1458, 2319
StyD4I CCNGG 2 cut(s) 215, 1629
StyI CCWWGG 2 cut(s) 1130, 1716
TaaI ACNGT 3 cut(s) 1861, 2335, 2627
TaiI ACGT 2 cut(s) 234, 2353
TaqII GACCGA 1 cut(s) 169
TauI GCSGC 8 cut(s) 32, 164, 167, 184, 550, 2138, 2524, 2527
TfiI GAWTC 9 cut(s) 366, 1106, 1159, 1184, 1205, 1211, 1626, 2168, 2376
TscAI CASTG 3 cut(s) 1024, 2519, 2562
TseFI GTSAC 4 cut(s) 635, 662, 2107, 2329
TseI GCWGC 1 cut(s) 1655
Tsp45I GTSAC 4 cut(s) 635, 662, 2107, 2329
TspGWI ACGGA 3 cut(s) 654, 1785, 2678
TspRI CASTG 3 cut(s) 1024, 2519, 2562
VpaK11BI GGWCC 6 cut(s) 152, 175, 213, 933, 1926, 2272
XagI CCTNNNNNAGG 1 cut(s) 928
XapI RAATTY 6 cut(s) 224, 1738, 1753, 1847, 2468, 2582
XceI RCATGY 1 cut(s) 2813
XhoI CTCGAG 2 cut(s) 925, 1118
XspI CTAG 4 cut(s) 149, 977, 1458, 2319
ZraI GACGTC 1 cut(s) 232
Zsp2I ATGCAT 2 cut(s) 1014, 1579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.