Rh4CG380700

Nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0011043
Physical Location & Seq
Reverse (-)
63470281 .. 63475768
5488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG380700.1

Sequence Viewer

Length: 2874 bp
ATGGCGAAGAAGAAGTCCGGCCCAAACGCCGTAGCCATGAAGCACCAGTCCCCAAAATCCAACCCTTTCGCAACCAAATCGCCAAAGCTCAGTCGCTCCGACGACAACGCCACCACCAAGGAGACGAAGAAGAAGAAGAAGAACAGTAAACTAGGACCCAAGGCGATGGCTATGAAGGTCCAGCCCCCGAAACCCAACCCCTTCGAGACCATATGGTCCCGGAGGAAATTCGACGTCCTCGGAAAGAAGCGCAAAGGCGAAGAGCGCCGTATGGGCCTCGCTCGCTCTCAGGCCATCGAAAAGAGGAAGAAGACACTGTTGAAGGAGTACGAGCAGAGCGGGAAATCTTCGGTTTTTGTGGATAAGCGAATCGGAGAGGAAAATGATGAGCTTGATGAGTTTGATAAGGCCATTCGGCGTACTCAGCGCGAGCGACAATTGAAGCAAAGCAAGAAAAGCAAGTATAACTTATCAGATGGAGAGGAGGACGAGTTTGAGTTTCAGAGTCTTGGTGCATTGTCTCAGAGGGATGATTTTGAGGATGATATGCCGCCCGAAGAGGACGAAGATGATGACGGTGGAGAAAGTGGTAAAAAAAGTTATCAATTTAATTCCGAGGATAAGGACGGGGATCTAAGTGACGGAAATGAAAATAGGCATAAAAGTGATAAGGAAAGATATGCTGAAATGATCTTAAAGTCCAAAAATTACAAGGCAGAAAAATCAAAGGAGAAGGATGAAAACAAAGATTTGATGGAAGAATTGGACAAAAAGTTCACCTCTGTAATTGCCTCAAAAGCTCTTACAAACAAGAGCTTCTCAACCGAATATATGAAGAAGCATGAGGTTTCTGCTACTCAAATCTTTGGAACTTCTGAGCAAGAGAAATCGGACTCTTATGATAAACTTGAAAGAGAATTGGCAATGGAAAGGCGTGCTCAACCCTCAAATAGGACAAAGACTCCTGAAGAGATAGCACAAGAAGAGAGGGAGCAACTTGAACGATTGGAGGAAGAGAGACAGAAAAGGATGCATCCCACTGATGACTATAGTGATGAAGACATTGAAGACGCTGAGAAACCATCTACGCTGAGGCCAAGATCTATATCTGGAGATGATCTTGGTGATTCCTTCTCGCTTGAGGAAGAACCAAGGACTAAAAAGGGTTGGGTTGATGAGATTCTCGAACGAAAAGATGCTAGTGATTCTGAGAGTGAAGGAGATGATTCTGGTTCTTCTGAGGATTCAGAAAGTCCTGAAGATTATGGTGATGAGGGATCTGATGAAGATGATAGTGAAGGGGAAAGAGATATATTGAATAAGGACTGGGAACAGAGTGATGATGATAATCTTGACATAGACTTGGATGATGAAGAAGACTCTGACGAACATGAAAAGGATGATGAGGCTTATCAAAAAGAGCTGGAGCCAAGAGATCTGAAAAGGTTGAAAAGAAATGTTGCTGTTCAAGCTAGTAAAAGTGATGATAAATCTTTAGGTGCAAAGAAATTACCAGCCAATAAACAATCTTCAACTCAGTCAGACCTCCCATACCTAATTGAAGCTCCAAAAAGCATGGAAGAGTTGGATGCTTTATTGGATAATCTTTCTAATGCTGACATTGCCTTGATAATCCATCGAATCCGGGCAAGCAATGCAATCAAGCTTGCAGCAGAAAATAAGAAGAAAATGCAAGTATTTTATGGTTTACTTTTGCAATATTTTGCCACCTTAGCAAATAAAAAACCGCTGAATTTGGAATTACTAAATTTGCTGGTTAAGCCCTTGATGGAGATGAGCATGGAGACTCCGTATTTTGCTTCAATCTGTGCTCGTGAGAGGATACTACGCACTAGAACAAAATTTTGTGAGACTGTTAAGAACCCAGAAAGTAGTTGTTGGCCTGCTTCAAAGACATTATTTCTCTTGAGGCTTTGGTCCCTGATATTTCCATGTTCAGACTTTCGTCATGTGGTCATGACTCCGGCAATATTTTTAATGTGTGAATATCTGACGCGTTGTCCCGTCTTGTCTGGTCGTGATGTTGCAGTTGGCTCGTTCTTATGCTCTCTGCTTCTTTCTATCACTAAGCAATCTCGGAAGTTCTGTCCTGAAGCAGTCACGTTTCTTCAAACATTGTTAAGGGCGGCCAAAGAGAGAAAGCCAAAGTCAACTCAAGATTCTGAGATTGATCATCTTATGGAATTAAAAGCACCCAGACCCCTTCTATATATACATGAATGTATAAATCGGATTGATCCACTTAATTTTCTCACAATTATGGACCTGCCAGAAGACTCGTTATTTTTCACCTCCGACAATTTCAGGTCTAGTGTGCTGGTGACTGTGATTGAAACTCTACGTGGATATGTCGGTATTTACGAAGGATTCAGTTCTTTCCCCGAAATGTTTTTGCCGATTTCAACATTGGTGCTTGAATTGTCGGAACAAGAAAATATGCCAAGTGCATTAACTGACAAATTTAAAGAGGTTGCTGAACTGATTAAGACAAAAGCAGATAAACACTGCATGCAGCGGCAACCACTTCAGATGCGGAAGCAAAAGCCAGTGGCTATTAAAATGCTTAATCCAAAATTTGAGGAGAACTTTGTCAAGGGCAGAGACTACGATCCAGACCGTGAACGGGTTGAGAGAAAGAAGTTGAAGAAGCGTTTGACACAAGAAGGTAAAGGCGCTGTTCGTGAACTGCGTAAAGATAATTATTTCTTACAGGAGCTGAAGTCGAGGGATAAGGCTCTGATGGAAGAAGAAAGAGCTGAGAAATATGGAAAAGCAAGACTTTTCCTTCAAGAGCAAGAACATGCTATGAAATCTGGGCAATTAGGAAAAGGCAGGGGGAAGAGAAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop14

Protein Analysis

957

Amino Acids

110.31

Weight (kDa)

5.61

Isoelectric Point (pI)

55.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop14 PF04147 64 - 941 7.9e-228 Nop14-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69070 AT1G69070
fragaria_vesca FvH4_4g29570 FvH4_4g29570 FvH4_4g29570
malus_domestica MD13G1058900.v1.1 MD16G1058200.v1.1
prunus_persica Prupe.1G290900_v2.0.a1
pyrus_communis pycom16g05090
rosa_chinensis RchiOBHm_Chr4g0437801
rosa_laevigata RLG00000006412
rosa_multiflora Rmu_sc0004193.1_g000019
rosa_roxburghii Rroxscaffold_5G00378900
rosa_rugosa Rorug04G0303800 Rorug04G0303800
rosa_samantha Rh4AG356100 Rh4BG366700 Rh4CG380700 Rh4DG361200
rosa_wichuraiana Rw4G031410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 214
AatII GACGTC 1 cut(s) 237
Acc36I ACCTGC 1 cut(s) 2295
AccBSI CCGCTC 1 cut(s) 339
AccII CGCG 2 cut(s) 429, 2017
AciI CCGC 6 cut(s) 339, 551, 1748, 2147, 2536, 2554
AclWI GGATC 4 cut(s) 639, 1285, 2252, 2624
AcoI YGGCCR 1 cut(s) 2148
AcsI RAATTY 6 cut(s) 227, 1753, 1768, 1862, 2480, 2594
AcuI CTGAAG 5 cut(s) 987, 1278, 2133, 2531, 2759
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 2 cut(s) 329, 421
AfiI CCNNNNNNNGG 2 cut(s) 951, 2644
AflIII ACRYGT 1 cut(s) 2015
AhdI GACNNNNNGTC 1 cut(s) 2019
AloI GAACNNNNNNTCC 2 cut(s) 758, 790
Alw21I GWGCWC 2 cut(s) 940, 1834
Alw26I GTCTC 7 cut(s) 116, 200, 525, 1012, 1799, 1865, 2616
AlwI GGATC 4 cut(s) 639, 1285, 2252, 2624
AlwNI CAGNNNCTG 1 cut(s) 2737
AoxI GGCC 7 cut(s) 19, 274, 291, 408, 1094, 1901, 2148
ApeKI GCWGC 2 cut(s) 1670, 2533
ApoI RAATTY 6 cut(s) 227, 1753, 1768, 1862, 2480, 2594
ArsI GACNNNNNNTTYG 1 cut(s) 31
AspLEI GCGC 4 cut(s) 252, 267, 429, 2696
AspS9I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1938, 2284
AsuC2I CCSGG 2 cut(s) 220, 1646
AsuHPI GGTGA 5 cut(s) 769, 1136, 1280, 2302, 2353
AvaII GGWCC 5 cut(s) 155, 178, 216, 1938, 2284
BauI CACGAG 1 cut(s) 1833
BbsI GAAGAC 5 cut(s) 317, 1065, 1074, 1383, 2301
Bbv12I GWGCWC 2 cut(s) 940, 1834
BbvCI CCTCAGC 1 cut(s) 1091
BbvI GCAGC 2 cut(s) 1682, 2545
BccI CCATC 8 cut(s) 160, 302, 470, 748, 1090, 1644, 1783, 2755
BceAI ACGGC 2 cut(s) 14, 252
BcgI CGANNNNNNTGC 4 cut(s) 60, 94, 2037, 2071
BciVI GTATCC 1 cut(s) 1836
BclI TGATCA 1 cut(s) 2191
BcnI CCSGG 2 cut(s) 220, 1646
BcoDI GTCTC 7 cut(s) 116, 200, 525, 1012, 1799, 1865, 2616
BfaI CTAG 5 cut(s) 152, 1200, 1473, 1854, 2331
BfmI CTRYAG 1 cut(s) 1048
BfoI RGCGCY 2 cut(s) 268, 2697
BfuAI ACCTGC 1 cut(s) 2295
BfuI GTATCC 1 cut(s) 1836
BglI GCCNNNNNGGC 1 cut(s) 273
BglII AGATCT 2 cut(s) 1100, 1435
BisI GCNGC 5 cut(s) 551, 1671, 2148, 2534, 2537
BlsI GCNGC 5 cut(s) 552, 1672, 2149, 2535, 2538
Bme1390I CCNGG 2 cut(s) 220, 1646
Bme18I GGWCC 5 cut(s) 155, 178, 216, 1938, 2284
BmeRI GACNNNNNGTC 1 cut(s) 2019
BmgT120I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1938, 2284
BmiI GGNNCC 4 cut(s) 157, 218, 1428, 1940
BmrFI CCNGG 2 cut(s) 220, 1646
BmrI ACTGGG 1 cut(s) 1336
BmsI GCATC 5 cut(s) 1020, 1042, 1186, 1579, 2541
BmuI ACTGGG 1 cut(s) 1336
BoxI GACNNNNGTC 1 cut(s) 1965
BpiI GAAGAC 5 cut(s) 317, 1065, 1074, 1383, 2301
BpmI CTGGAG 2 cut(s) 1131, 1445
Bpu10I CCTNAGC 2 cut(s) 1091, 1732
BpuEI CTTGAG 3 cut(s) 1160, 1948, 2160
BpuMI CCSGG 2 cut(s) 220, 1646
BsaAI YACGTR 1 cut(s) 2363
BsaBI GATNNNNATC 2 cut(s) 1105, 1347
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 5 cut(s) 117, 159, 238, 615, 1151
BsaXI ACNNNNNCTCC 8 cut(s) 476, 506, 946, 976, 1796, 1826, 2726, 2756
Bsc4I CCNNNNNNNGG 2 cut(s) 951, 2644
Bse1I ACTGG 3 cut(s) 46, 1331, 2567
Bse3DI GCAATG 3 cut(s) 930, 1620, 1660
Bse8I GATNNNNATC 2 cut(s) 1105, 1347
BseDI CCNNGG 5 cut(s) 117, 159, 238, 615, 1151
BseGI GGATG 8 cut(s) 535, 547, 742, 1033, 1035, 1372, 1405, 1594
BseJI GATNNNNATC 2 cut(s) 1105, 1347
BseLI CCNNNNNNNGG 2 cut(s) 951, 2644
BseMI GCAATG 3 cut(s) 930, 1620, 1660
BseNI ACTGG 3 cut(s) 46, 1331, 2567
BseRI GAGGAG 2 cut(s) 497, 2615
BseXI GCAGC 2 cut(s) 1682, 2545
Bsh1236I CGCG 2 cut(s) 429, 2017
BshFI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1903, 2150
BsiHKAI GWGCWC 2 cut(s) 940, 1834
BsiSI CCGG 4 cut(s) 18, 220, 1645, 1985
BslFI GGGAC 4 cut(s) 34, 202, 1924, 2007
BslI CCNNNNNNNGG 2 cut(s) 951, 2644
BsmAI GTCTC 7 cut(s) 116, 200, 525, 1012, 1799, 1865, 2616
BsmBI CGTCTC 1 cut(s) 116
BsmFI GGGAC 4 cut(s) 34, 202, 1924, 2007
BsnI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1903, 2150
Bso31I GGTCTC 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 940, 1834
Bsp143I GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
BspACI CCGC 6 cut(s) 339, 551, 1748, 2147, 2536, 2554
BspANI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1903, 2150
BspFNI CGCG 2 cut(s) 429, 2017
BspHI TCATGA 1 cut(s) 1977
BspLI GGNNCC 4 cut(s) 157, 218, 1428, 1940
BspMI ACCTGC 1 cut(s) 2295
BspPI GGATC 4 cut(s) 639, 1285, 2252, 2624
BspQI GCTCTTC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 339
BsrDI GCAATG 3 cut(s) 930, 1620, 1660
BsrI ACTGG 3 cut(s) 46, 1331, 2567
BssECI CCNNGG 5 cut(s) 117, 159, 238, 615, 1151
BssMI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
BssNI GRCGYC 1 cut(s) 234
BssSI CACGAG 1 cut(s) 1833
BssT1I CCWWGG 3 cut(s) 117, 159, 1151
Bst2BI CACGAG 1 cut(s) 1833
Bst4CI ACNGT 6 cut(s) 146, 318, 578, 1876, 2347, 2639
Bst6I CTCTTC 7 cut(s) 255, 552, 963, 978, 1008, 1575, 2855
BstACI GRCGYC 1 cut(s) 234
BstAPI GCANNNNNTGC 1 cut(s) 1655
BstBAI YACGTR 1 cut(s) 2363
BstC8I GCNNGC 7 cut(s) 283, 431, 936, 1651, 1668, 1905, 2531
BstENI CCTNNNNNAGG 1 cut(s) 949
BstF5I GGATG 8 cut(s) 535, 547, 742, 1033, 1035, 1372, 1405, 1594
BstFNI CGCG 2 cut(s) 429, 2017
BstH2I RGCGCY 2 cut(s) 268, 2697
BstHHI GCGC 4 cut(s) 252, 267, 429, 2696
BstKTI GATC 9 cut(s) 634, 693, 1103, 1120, 1280, 1438, 2194, 2260, 2632
BstMAI GTCTC 7 cut(s) 116, 200, 525, 1012, 1799, 1865, 2616
BstMBI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
BstNSI RCATGY 2 cut(s) 2533, 2825
BstPAI GACNNNNGTC 1 cut(s) 1965
BstSCI CCNGG 2 cut(s) 218, 1644
BstSFI CTRYAG 1 cut(s) 1048
BstUI CGCG 2 cut(s) 429, 2017
BstV1I GCAGC 2 cut(s) 1682, 2545
BstV2I GAAGAC 5 cut(s) 317, 1065, 1074, 1383, 2301
BstX2I RGATCY 4 cut(s) 631, 1100, 1277, 1435
BstXI CCANNNNNNTGG 1 cut(s) 166
BstYI RGATCY 4 cut(s) 631, 1100, 1277, 1435
BsuI GTATCC 1 cut(s) 1836
BsuRI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1903, 2150
BtgZI GCGATG 1 cut(s) 179
BtsCI GGATG 8 cut(s) 535, 547, 742, 1033, 1035, 1372, 1405, 1594
BtsI GCAGTG 1 cut(s) 2524
BtsIMutI CAGTG 4 cut(s) 314, 1038, 2524, 2574
BveI ACCTGC 1 cut(s) 2295
Cac8I GCNNGC 7 cut(s) 283, 431, 936, 1651, 1668, 1905, 2531
CaiI CAGNNNCTG 1 cut(s) 2737
CciI TCATGA 1 cut(s) 1977
CfoI GCGC 4 cut(s) 252, 267, 429, 2696
Cfr13I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1938, 2284
CseI GACGC 2 cut(s) 1079, 2023
Csp6I GTAC 2 cut(s) 328, 420
CviQI GTAC 2 cut(s) 328, 420
DpnI GATC 9 cut(s) 633, 692, 1102, 1119, 1279, 1437, 2193, 2259, 2631
DpnII GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
DraI TTTAAA 1 cut(s) 2485
DrdI GACNNNNNNGTC 1 cut(s) 214
DriI GACNNNNNGTC 1 cut(s) 2019
DseDI GACNNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 2148
Eam1104I CTCTTC 7 cut(s) 255, 552, 963, 978, 1008, 1575, 2855
Eam1105I GACNNNNNGTC 1 cut(s) 2019
EarI CTCTTC 7 cut(s) 255, 552, 963, 978, 1008, 1575, 2855
Eco130I CCWWGG 3 cut(s) 117, 159, 1151
Eco31I GGTCTC 1 cut(s) 200
Eco47I GGWCC 5 cut(s) 155, 178, 216, 1938, 2284
Eco57I CTGAAG 5 cut(s) 987, 1278, 2133, 2531, 2759
EcoNI CCTNNNNNAGG 1 cut(s) 949
EcoO109I RGGNCCY 1 cut(s) 155
EcoT14I CCWWGG 3 cut(s) 117, 159, 1151
EcoT22I ATGCAT 1 cut(s) 1035
ErhI CCWWGG 3 cut(s) 117, 159, 1151
Esp3I CGTCTC 1 cut(s) 116
FalI AAGNNNNNCTT 4 cut(s) 452, 484, 2784, 2816
FaqI GGGAC 4 cut(s) 34, 202, 1924, 2007
FauI CCCGC 1 cut(s) 332
FauNDI CATATG 1 cut(s) 212
FbaI TGATCA 1 cut(s) 2191
Fnu4HI GCNGC 5 cut(s) 551, 1671, 2148, 2534, 2537
FokI GGATG 8 cut(s) 542, 554, 749, 1020, 1042, 1379, 1412, 1601
Fsp4HI GCNGC 5 cut(s) 551, 1671, 2148, 2534, 2537
FspBI CTAG 5 cut(s) 152, 1200, 1473, 1854, 2331
GlaI GCGC 4 cut(s) 251, 266, 428, 2695
GluI GCNGC 5 cut(s) 551, 1671, 2148, 2534, 2537
GsuI CTGGAG 2 cut(s) 1131, 1445
HaeII RGCGCY 2 cut(s) 268, 2697
HaeIII GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1903, 2150
HapII CCGG 4 cut(s) 18, 220, 1645, 1985
HgaI GACGC 2 cut(s) 1079, 2023
HhaI GCGC 4 cut(s) 252, 267, 429, 2696
Hin1I GRCGYC 1 cut(s) 234
Hin6I GCGC 4 cut(s) 250, 265, 427, 2694
HinP1I GCGC 4 cut(s) 250, 265, 427, 2694
HincII GTYRAC 1 cut(s) 2172
HindII GTYRAC 1 cut(s) 2172
HindIII AAGCTT 1 cut(s) 1664
HpaII CCGG 4 cut(s) 18, 220, 1645, 1985
HphI GGTGA 5 cut(s) 769, 1136, 1280, 2302, 2353
Hpy166II GTNNAC 6 cut(s) 149, 777, 1709, 2172, 2642, 2705
Hpy8I GTNNAC 6 cut(s) 149, 777, 1709, 2172, 2642, 2705
Hpy99I CGWCG 2 cut(s) 104, 236
HpyCH4III ACNGT 6 cut(s) 146, 318, 578, 1876, 2347, 2639
HpyCH4IV ACGT 3 cut(s) 234, 2123, 2362
HpySE526I ACGT 3 cut(s) 234, 2123, 2362
Hsp92I GRCGYC 1 cut(s) 234
HspAI GCGC 4 cut(s) 250, 265, 427, 2694
Ksp22I TGATCA 1 cut(s) 2191
Kzo9I GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 5 cut(s) 101, 991, 1426, 1570, 2734
Lsp1109I GCAGC 2 cut(s) 1682, 2545
LweI GCATC 5 cut(s) 1020, 1042, 1186, 1579, 2541
MaeI CTAG 5 cut(s) 152, 1200, 1473, 1854, 2331
MaeII ACGT 3 cut(s) 234, 2123, 2362
MaeIII GTNAC 3 cut(s) 638, 2119, 2341
MalI GATC 9 cut(s) 633, 692, 1102, 1119, 1279, 1437, 2193, 2259, 2631
MbiI CCGCTC 1 cut(s) 339
MboI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
MfeI CAATTG 1 cut(s) 437
MflI RGATCY 4 cut(s) 631, 1100, 1277, 1435
MhlI GDGCHC 2 cut(s) 940, 1834
MluI ACGCGT 1 cut(s) 2015
MlyI GAGTC 7 cut(s) 514, 887, 955, 1373, 1801, 1975, 2291
MmeI TCCRAC 5 cut(s) 84, 123, 1566, 2340, 2424
Mph1103I ATGCAT 1 cut(s) 1035
MslI CAYNNNNRTG 2 cut(s) 663, 2279
MspA1I CMGCKG 2 cut(s) 1750, 2536
MspI CCGG 4 cut(s) 18, 220, 1645, 1985
MspR9I CCNGG 2 cut(s) 220, 1646
MunI CAATTG 1 cut(s) 437
MvnI CGCG 2 cut(s) 429, 2017
NciI CCSGG 2 cut(s) 220, 1646
NdeI CATATG 1 cut(s) 212
NdeII GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
NlaIV GGNNCC 4 cut(s) 157, 218, 1428, 1940
NmuCI GTSAC 3 cut(s) 638, 2119, 2341
NsiI ATGCAT 1 cut(s) 1035
NspI RCATGY 2 cut(s) 2533, 2825
PaeI GCATGC 1 cut(s) 2533
PagI TCATGA 1 cut(s) 1977
PciSI GCTCTTC 1 cut(s) 255
PcsI WCGNNNNNNNCGW 2 cut(s) 2379, 2707
PfeI GAWTC 9 cut(s) 369, 1127, 1180, 1205, 1226, 1244, 1641, 2180, 2388
PfoI TCCNGGA 1 cut(s) 218
PkrI GCNGC 5 cut(s) 552, 1672, 2149, 2535, 2538
PleI GAGTC 7 cut(s) 513, 887, 955, 1373, 1801, 1975, 2291
PpsI GAGTC 7 cut(s) 513, 887, 955, 1373, 1801, 1975, 2291
Ppu21I YACGTR 1 cut(s) 2363
PpuMI RGGWCCY 1 cut(s) 155
PshAI GACNNNNGTC 1 cut(s) 1965
Psp5II RGGWCCY 1 cut(s) 155
PspN4I GGNNCC 4 cut(s) 157, 218, 1428, 1940
PspPI GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1938, 2284
PspPPI RGGWCCY 1 cut(s) 155
PstNI CAGNNNCTG 1 cut(s) 2737
PsuI RGATCY 4 cut(s) 631, 1100, 1277, 1435
RsaI GTAC 2 cut(s) 329, 421
RsaNI GTAC 2 cut(s) 328, 420
RseI CAYNNNNRTG 2 cut(s) 663, 2279
SapI GCTCTTC 1 cut(s) 255
SatI GCNGC 5 cut(s) 551, 1671, 2148, 2534, 2537
Sau3AI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1435, 2191, 2257, 2629
Sau96I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1938, 2284
SchI GAGTC 7 cut(s) 514, 887, 955, 1373, 1801, 1975, 2291
ScrFI CCNGG 2 cut(s) 220, 1646
SduI GDGCHC 2 cut(s) 940, 1834
SfaNI GCATC 5 cut(s) 1020, 1042, 1186, 1579, 2541
SfcI CTRYAG 1 cut(s) 1048
SinI GGWCC 5 cut(s) 155, 178, 216, 1938, 2284
SmiMI CAYNNNNRTG 2 cut(s) 663, 2279
SmlI CTYRAG 3 cut(s) 1139, 1927, 2175
SmoI CTYRAG 3 cut(s) 1139, 1927, 2175
SphI GCATGC 1 cut(s) 2533
SsiI CCGC 6 cut(s) 339, 551, 1748, 2147, 2536, 2554
SspI AATATT 2 cut(s) 1721, 1992
SspMI CTAG 5 cut(s) 152, 1200, 1473, 1854, 2331
StyD4I CCNGG 2 cut(s) 218, 1644
StyI CCWWGG 3 cut(s) 117, 159, 1151
TaaI ACNGT 6 cut(s) 146, 318, 578, 1876, 2347, 2639
TaiI ACGT 3 cut(s) 237, 2126, 2365
TaqI TCGA 6 cut(s) 204, 231, 297, 1185, 1639, 2744
TauI GCSGC 3 cut(s) 553, 2150, 2539
TfiI GAWTC 9 cut(s) 369, 1127, 1180, 1205, 1226, 1244, 1641, 2180, 2388
TscAI CASTG 4 cut(s) 321, 1045, 2531, 2574
TseFI GTSAC 3 cut(s) 638, 2119, 2341
TseI GCWGC 2 cut(s) 1670, 2533
Tsp45I GTSAC 3 cut(s) 638, 2119, 2341
TspGWI ACGGA 2 cut(s) 657, 1800
TspRI CASTG 4 cut(s) 321, 1045, 2531, 2574
VpaK11BI GGWCC 5 cut(s) 155, 178, 216, 1938, 2284
XagI CCTNNNNNAGG 1 cut(s) 949
XapI RAATTY 6 cut(s) 227, 1753, 1768, 1862, 2480, 2594
XceI RCATGY 2 cut(s) 2533, 2825
XspI CTAG 5 cut(s) 152, 1200, 1473, 1854, 2331
ZraI GACGTC 1 cut(s) 235
Zsp2I ATGCAT 1 cut(s) 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.