MD13G1058900.v1.1

Nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0011043
Physical Location & Seq
Reverse (-)
4107216 .. 4112620
5405 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1058900.v1.1.491

Sequence Viewer

Length: 2409 bp
ATGGCGAAACACAAGGAGAAGCACCACCAGAAGTCCGTTTCAAAACCCAACCCCTTCGAGACCAAATCACCAAAACTCGGCAGAGCTGACGCCAATCACAACCATGAGGCGGCGGCGACGGCGAAGAAGAAAAAGAATAAGCTAGGCCCGAACGCTGTCGCCATGAAGCACCAGGCCCCCCTAAAACCCAACCCGTTCGAGACCATTTGGTCCCGGAGGAAATTCGACATTCTCGGCAAAAAGCGCAAAGGCGAAGAGCGCCGAGTTGGCCTCTCCCGCTCTCGCGCCATTGAAAAGAGGAAGAACACGCTGCTGAGGGAGTACGAGCAGAGCAATAAAGCTTCGGTCTTTGTCGATAAGCGAATTGGGGAGCATAATGACGAGCTCAATGAGTTCGATAAGGCCATTCAGCGTGCGCAGCGTGAGCATCAATTAAAGACGAACAAGAAAGGCAAATATAACTTATCAGATGGAGAAGAAGACGACTTTGAATTTCAAAGTCTTGGTGCATTATCTGAAAGGGATGATTTTGAGGATGATGTGCTGCCTGATGATGACGACGATGGCACAGAAACCACTCAAACTAAGAAAAGGTTAGCCATGACAGATCAAATGGATGGTGATCTAATGGAAGGAGAGGAAAATAGACCTAAAAGCAAGAAGGAAGTAATGAAGGAGGTTATGGCAAAAGACAAATATTATAGGGCTGAAAGAGCAAAAGATAAGGAAGAACTTGAAGATTTTAGGCAAGAATTGGACAAATCCTTCACATCCATTGTGCCCTCTAAACTGTTACAAATTACTGAACCAGACAAGAACATTCCAAATGAGCATTCGAAGAAGGATGAGCTTTCTGAACAGGAAAAATCCCGTTCTTATTTCAAAACTTTTGGCAACTTAGTCATGGTAAGCCGTGCTCAACCCTCTGACAGGACAAAGACACCTGAAGAGATAGCACAAGAGGAGAGAGAGCAGCTTGAGCATTTGGAGGAAGAGAGACAGAAGAGGATGCTTGCCACTGATATCAATAGTGACGATGACAATGAAGATGCTGAGACACCATCTAACCATAATAAGCCAAGACCCATATCTGGAGATGATCTTGGCGATTCCTTCTCTCTTGATGAAGAGCCGCGGATTAAAAAGGGTTGGGTTGATGAGATTCTAGAAAGAAAAGATGCTAGCGATTCTGAGAGTGAAGAAGGCGATGCTTCTGAGGATTCAGAAAGTCCTGAAGATGACAGTGAAGGATCTGATAAAGATATTAACCTGGGTGAAAAGAATCTATTTATGAAGGACTGGGAACAAAGTGATGATGATAATCTTGGAACGGATTTGGATGAGGAGGAAGAAAAAGAAGATGGGTCTGAAGCACATGAAGAGGATGATGATGCTGATGAAGAAGAGGTGGAACCAAGAAAGCTGAAAAAAATGAAAAAAATTGATGCTTCTGAAGCCAGTAAAAAAGAGGGCGATTCTTTAGATGCCAAGAAAATATCTCAGGACGGTAAACGACCTTCTACTCAGTCAGACCTCCCGTACCTAATCGAAGCTCCAAAAAGCTTTGAAGAGTTTGGTGCATTGGTGGATAATCTTTCTAATGCTGACATTGTCTTGATTATCAATCGAATCCGGAAAAGCAATGCAATCAAGCTTGCAGCAGAAAACAGGAAGAAAATGCAAGTATTTTATGGTGTACTCCTGCAGTATTTTGCCATATTAGCAAATAGAAAGCCGTTGAATATGGAGTTGTTAAATTTTCTGGTTAAGCCATTGATTGAGATGAGTATGGAGACTCCATACTTCGCTGCAATTTGTGCTCGTGAGAGAATTTTACGGGCGCGGACGGAATTTAGTGAGACCGTTAAGAACCCAGCAACACTGTTGATGTGTGAATATCTGGCACGTAGTCCTATCATGTCTGGTCGTGATACTGCAGTTGGTTCTTTCTTGTGCTCCATGCTTCTCTCTATAACCAAACAATCTCGGAAGTTCTGTCCTGAAGCAGTCATGTTTCTCACAACATTGTTGATGGCAGCTAAAGACAGAAAGCCAATGCCAAGTCAAAATTCTCATTTTTGTCATCTTATGGAATTAAAAGCAATCAGGCCTCTCTTATGTATAAATGAATCCGTAGGTCAGGTCAATCCTCTGAATTTTCTCACAATAATGGACCTACCGGAAGACTCCTCTTTTTTCAGATCTGACGATTTCAGGGCTAGTGTGCTGGTGACGGTGATTGAAACTCTACGTGAGTTTGTCATTGTTTATGAAGGATTCAGTTCTTTTCCTGAAATCTTTTTGCCAATTTCAGTATTGTTGCTTGAAGTGGCGGAACAGGATAATATACCACAAGTATTAACAGACAAATTGAAAGATGTTGCTGAACTGATTAAGACGAGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop14

Protein Analysis

803

Amino Acids

91.73

Weight (kDa)

5.03

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop14 PF04147 62 - 621 1.5e-125 Nop14-like family
Nop14 PF04147 621 - 800 1.4e-31 Nop14-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69070 AT1G69070
fragaria_vesca FvH4_4g29570 FvH4_4g29570 FvH4_4g29570
malus_domestica MD13G1058900.v1.1 MD16G1058200.v1.1
prunus_persica Prupe.1G290900_v2.0.a1
pyrus_communis pycom16g05090
rosa_chinensis RchiOBHm_Chr4g0437801
rosa_laevigata RLG00000006412
rosa_multiflora Rmu_sc0004193.1_g000019
rosa_roxburghii Rroxscaffold_5G00378900
rosa_rugosa Rorug04G0303800 Rorug04G0303800
rosa_samantha Rh4AG356100 Rh4BG366700 Rh4CG380700 Rh4DG361200
rosa_wichuraiana Rw4G031410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 208
Acc16I TGCGCA 1 cut(s) 417
AccBSI CCGCTC 1 cut(s) 279
AccII CGCG 3 cut(s) 285, 1135, 1843
AccIII TCCGGA 1 cut(s) 1632
AciI CCGC 7 cut(s) 110, 113, 277, 1133, 1135, 1843, 2333
AclWI GGATC 1 cut(s) 1258
AcsI RAATTY 7 cut(s) 221, 491, 1756, 1830, 1850, 2068, 2155
AcuI CTGAAG 5 cut(s) 966, 1254, 1389, 1473, 2022
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 3 cut(s) 323, 1541, 1698
AfiI CCNNNNNNNGG 4 cut(s) 77, 109, 930, 1091
AjnI CCWGG 2 cut(s) 171, 1269
AjuI GAANNNNNNNTTGG 4 cut(s) 817, 849, 2053, 2085
Alw21I GWGCWC 4 cut(s) 387, 919, 1822, 1958
Alw26I GTCTC 6 cut(s) 53, 194, 991, 1049, 1787, 1853
AlwI GGATC 1 cut(s) 1258
Aor13HI TCCGGA 1 cut(s) 1632
AoxI GGCC 5 cut(s) 145, 174, 268, 402, 2108
ApeKI GCWGC 7 cut(s) 310, 418, 544, 973, 1658, 1808, 2036
ApoI RAATTY 7 cut(s) 221, 491, 1756, 1830, 1850, 2068, 2155
AspLEI GCGC 5 cut(s) 246, 261, 287, 418, 1843
AspS9I GGNCC 4 cut(s) 146, 175, 210, 2173
AsuC2I CCSGG 1 cut(s) 214
AsuHPI GGTGA 5 cut(s) 60, 632, 1286, 2242, 2248
AsuII TTCGAA 1 cut(s) 836
AsuNHI GCTAGC 1 cut(s) 1181
AvaII GGWCC 2 cut(s) 210, 2173
BaeGI GKGCMC 1 cut(s) 783
BaeI ACNNNNGTAYC 2 cut(s) 1923, 1956
BanII GRGCYC 1 cut(s) 387
BarI GAAGNNNNNNTAC 2 cut(s) 1501, 1533
BauI CACGAG 1 cut(s) 1821
BbsI GAAGAC 2 cut(s) 486, 2190
Bbv12I GWGCWC 4 cut(s) 387, 919, 1822, 1958
BbvCI CCTCAGC 1 cut(s) 314
BbvI GCAGC 7 cut(s) 297, 430, 531, 985, 1670, 1795, 2048
BccI CCATC 6 cut(s) 464, 557, 611, 1069, 1355, 2026
BceAI ACGGC 3 cut(s) 135, 897, 1720
BciT130I CCWGG 2 cut(s) 173, 1271
BcnI CCSGG 1 cut(s) 214
BcoDI GTCTC 6 cut(s) 53, 194, 991, 1049, 1787, 1853
BfaI CTAG 4 cut(s) 143, 1166, 1182, 2220
BfmI CTRYAG 2 cut(s) 1703, 1935
BfoI RGCGCY 1 cut(s) 262
BglI GCCNNNNNGGC 1 cut(s) 267
BglII AGATCT 1 cut(s) 2201
Bme1390I CCNGG 3 cut(s) 173, 214, 1271
Bme18I GGWCC 2 cut(s) 210, 2173
BmgT120I GGNCC 4 cut(s) 146, 175, 210, 2173
BmiI GGNNCC 3 cut(s) 177, 212, 1413
BmrFI CCNGG 3 cut(s) 173, 214, 1271
BmrI ACTGGG 1 cut(s) 1309
BmsI GCATC 8 cut(s) 436, 999, 1039, 1168, 1198, 1381, 1435, 1474
BmtI GCTAGC 1 cut(s) 1185
BmuI ACTGGG 1 cut(s) 1309
BpiI GAAGAC 2 cut(s) 486, 2190
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BpmI CTGGAG 1 cut(s) 1113
Bpu10I CCTNAGC 1 cut(s) 314
Bpu14I TTCGAA 1 cut(s) 836
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 1 cut(s) 214
BsaAI YACGTR 2 cut(s) 1907, 2252
BsaBI GATNNNNATC 2 cut(s) 621, 1320
BsaHI GRCGYC 1 cut(s) 90
BsaI GGTCTC 3 cut(s) 53, 194, 1853
BsaJI CCNNGG 2 cut(s) 1133, 1270
BsaWI WCCGGW 2 cut(s) 1632, 2179
Bsc4I CCNNNNNNNGG 4 cut(s) 77, 109, 930, 1091
Bse1I ACTGG 2 cut(s) 1304, 1458
Bse3DI GCAATG 1 cut(s) 1648
Bse8I GATNNNNATC 2 cut(s) 621, 1320
BseAI TCCGGA 1 cut(s) 1632
BseBI CCWGG 2 cut(s) 173, 1271
BseDI CCNNGG 2 cut(s) 1133, 1270
BseGI GGATG 8 cut(s) 529, 541, 622, 770, 850, 1014, 1345, 1390
BseJI GATNNNNATC 2 cut(s) 621, 1320
BseLI CCNNNNNNNGG 4 cut(s) 77, 109, 930, 1091
BseMI GCAATG 1 cut(s) 1648
BseMII CTCAG 6 cut(s) 305, 1044, 1182, 1206, 1514, 1538
BseNI ACTGG 2 cut(s) 1304, 1458
BseRI GAGGAG 3 cut(s) 977, 1358, 2179
BseSI GKGCMC 1 cut(s) 783
BseXI GCAGC 7 cut(s) 297, 430, 531, 985, 1670, 1795, 2048
BseYI CCCAGC 1 cut(s) 1873
Bsh1236I CGCG 3 cut(s) 285, 1135, 1843
BshFI GGCC 5 cut(s) 147, 176, 270, 404, 2110
BsiHKAI GWGCWC 4 cut(s) 387, 919, 1822, 1958
BsiSI CCGG 3 cut(s) 214, 1633, 2180
BslFI GGGAC 1 cut(s) 196
BslI CCNNNNNNNGG 4 cut(s) 77, 109, 930, 1091
BsmAI GTCTC 6 cut(s) 53, 194, 991, 1049, 1787, 1853
BsmFI GGGAC 1 cut(s) 196
BsmI GAATGC 1 cut(s) 832
BsnI GGCC 5 cut(s) 147, 176, 270, 404, 2110
Bso31I GGTCTC 3 cut(s) 53, 194, 1853
Bsp119I TTCGAA 1 cut(s) 836
Bsp1286I GDGCHC 5 cut(s) 387, 783, 919, 1822, 1958
Bsp13I TCCGGA 1 cut(s) 1632
Bsp143I GATC 5 cut(s) 607, 622, 1099, 1250, 2201
BspACI CCGC 7 cut(s) 110, 113, 277, 1133, 1135, 1843, 2333
BspANI GGCC 5 cut(s) 147, 176, 270, 404, 2110
BspCNI CTCAG 6 cut(s) 306, 1045, 1183, 1207, 1513, 1537
BspEI TCCGGA 1 cut(s) 1632
BspFNI CGCG 3 cut(s) 285, 1135, 1843
BspLI GGNNCC 3 cut(s) 177, 212, 1413
BspMAI CTGCAG 2 cut(s) 1707, 1939
BspOI GCTAGC 1 cut(s) 1185
BspPI GGATC 1 cut(s) 1258
BspQI GCTCTTC 2 cut(s) 249, 1122
BspT104I TTCGAA 1 cut(s) 836
BspTNI GGTCTC 3 cut(s) 53, 194, 1853
BsrBI CCGCTC 1 cut(s) 279
BsrDI GCAATG 1 cut(s) 1648
BsrI ACTGG 2 cut(s) 1304, 1458
BssECI CCNNGG 2 cut(s) 1133, 1270
BssMI GATC 5 cut(s) 607, 622, 1099, 1250, 2201
BssNI GRCGYC 1 cut(s) 90
BssSI CACGAG 1 cut(s) 1821
Bst2BI CACGAG 1 cut(s) 1821
Bst2UI CCWGG 2 cut(s) 173, 1271
Bst4CI ACNGT 6 cut(s) 792, 1244, 1508, 1864, 1884, 2236
Bst6I CTCTTC 8 cut(s) 249, 942, 987, 998, 1122, 1374, 1398, 1563
BstACI GRCGYC 1 cut(s) 90
BstAPI GCANNNNNTGC 1 cut(s) 1817
BstBAI YACGTR 2 cut(s) 1907, 2252
BstBI TTCGAA 1 cut(s) 836
BstC8I GCNNGC 4 cut(s) 414, 1014, 1183, 1656
BstDEI CTNAG 8 cut(s) 314, 585, 898, 1053, 1191, 1215, 1500, 1524
BstDSI CCRYGG 1 cut(s) 1133
BstENI CCTNNNNNAGG 1 cut(s) 928
BstF5I GGATG 8 cut(s) 529, 541, 622, 770, 850, 1014, 1345, 1390
BstFNI CGCG 3 cut(s) 285, 1135, 1843
BstH2I RGCGCY 1 cut(s) 262
BstHHI GCGC 5 cut(s) 246, 261, 287, 418, 1843
BstKTI GATC 5 cut(s) 610, 625, 1102, 1253, 2204
BstMAI GTCTC 6 cut(s) 53, 194, 991, 1049, 1787, 1853
BstMBI GATC 5 cut(s) 607, 622, 1099, 1250, 2201
BstNI CCWGG 2 cut(s) 173, 1271
BstSCI CCNGG 3 cut(s) 171, 212, 1269
BstSFI CTRYAG 2 cut(s) 1703, 1935
BstSLI GKGCMC 1 cut(s) 783
BstUI CGCG 3 cut(s) 285, 1135, 1843
BstV1I GCAGC 7 cut(s) 297, 430, 531, 985, 1670, 1795, 2048
BstV2I GAAGAC 2 cut(s) 486, 2190
BstX2I RGATCY 2 cut(s) 1250, 2201
BstYI RGATCY 2 cut(s) 1250, 2201
BsuRI GGCC 5 cut(s) 147, 176, 270, 404, 2110
BtgI CCRYGG 1 cut(s) 1133
BtgZI GCGATG 1 cut(s) 1221
BtsCI GGATG 8 cut(s) 529, 541, 622, 770, 850, 1014, 1345, 1390
BtsIMutI CAGTG 3 cut(s) 1017, 1249, 1880
Cac8I GCNNGC 4 cut(s) 414, 1014, 1183, 1656
CfoI GCGC 5 cut(s) 246, 261, 287, 418, 1843
Cfr13I GGNCC 4 cut(s) 146, 175, 210, 2173
Cfr42I CCGCGG 1 cut(s) 1136
CseI GACGC 1 cut(s) 98
Csp6I GTAC 3 cut(s) 322, 1540, 1697
CviAII CATG 8 cut(s) 104, 163, 601, 904, 1376, 1918, 1960, 2011
CviQI GTAC 3 cut(s) 322, 1540, 1697
DdeI CTNAG 8 cut(s) 314, 585, 898, 1053, 1191, 1215, 1500, 1524
DpnI GATC 5 cut(s) 609, 624, 1101, 1252, 2203
DpnII GATC 5 cut(s) 607, 622, 1099, 1250, 2201
DrdI GACNNNNNNGTC 1 cut(s) 208
DseDI GACNNNNNNGTC 1 cut(s) 208
Eam1104I CTCTTC 8 cut(s) 249, 942, 987, 998, 1122, 1374, 1398, 1563
EarI CTCTTC 8 cut(s) 249, 942, 987, 998, 1122, 1374, 1398, 1563
EciI GGCGGA 1 cut(s) 2348
Ecl136II GAGCTC 1 cut(s) 385
Eco147I AGGCCT 1 cut(s) 2110
Eco24I GRGCYC 1 cut(s) 387
Eco31I GGTCTC 3 cut(s) 53, 194, 1853
Eco32I GATATC 1 cut(s) 1024
Eco47I GGWCC 2 cut(s) 210, 2173
Eco53kI GAGCTC 1 cut(s) 385
Eco57I CTGAAG 5 cut(s) 966, 1254, 1389, 1473, 2022
EcoICRI GAGCTC 1 cut(s) 385
EcoNI CCTNNNNNAGG 1 cut(s) 928
EcoO109I RGGNCCY 1 cut(s) 175
EcoRII CCWGG 2 cut(s) 171, 1269
EcoRV GATATC 1 cut(s) 1024
EcoT38I GRGCYC 1 cut(s) 387
FaeI CATG 8 cut(s) 107, 166, 604, 907, 1379, 1921, 1963, 2014
FaqI GGGAC 1 cut(s) 196
FatI CATG 8 cut(s) 103, 162, 600, 903, 1375, 1917, 1959, 2010
FauI CCCGC 1 cut(s) 284
FokI GGATG 8 cut(s) 536, 548, 629, 757, 857, 1021, 1352, 1397
FriOI GRGCYC 1 cut(s) 387
FspBI CTAG 4 cut(s) 143, 1166, 1182, 2220
FspI TGCGCA 1 cut(s) 417
GlaI GCGC 5 cut(s) 245, 260, 286, 417, 1842
GsaI CCCAGC 1 cut(s) 1877
GsuI CTGGAG 1 cut(s) 1113
HaeII RGCGCY 1 cut(s) 262
HaeIII GGCC 5 cut(s) 147, 176, 270, 404, 2110
HapII CCGG 3 cut(s) 214, 1633, 2180
HgaI GACGC 1 cut(s) 98
HhaI GCGC 5 cut(s) 246, 261, 287, 418, 1843
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 8 cut(s) 107, 166, 604, 907, 1379, 1921, 1963, 2014
Hin6I GCGC 5 cut(s) 244, 259, 285, 416, 1841
HinP1I GCGC 5 cut(s) 244, 259, 285, 416, 1841
HindIII AAGCTT 3 cut(s) 339, 1561, 1652
HpaII CCGG 3 cut(s) 214, 1633, 2180
HphI GGTGA 5 cut(s) 60, 632, 1286, 2242, 2248
Hpy166II GTNNAC 2 cut(s) 1511, 1697
Hpy8I GTNNAC 2 cut(s) 1511, 1697
Hpy99I CGWCG 2 cut(s) 121, 563
HpyCH4III ACNGT 6 cut(s) 792, 1244, 1508, 1864, 1884, 2236
HpyCH4IV ACGT 2 cut(s) 1906, 2251
HpyCH4V TGCA 8 cut(s) 509, 1580, 1646, 1658, 1681, 1705, 1811, 1937
HpyF3I CTNAG 8 cut(s) 314, 585, 898, 1053, 1191, 1215, 1500, 1524
HpySE526I ACGT 2 cut(s) 1906, 2251
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 8 cut(s) 107, 166, 604, 907, 1379, 1921, 1963, 2014
HspAI GCGC 5 cut(s) 244, 259, 285, 416, 1841
Kpn2I TCCGGA 1 cut(s) 1632
KspI CCGCGG 1 cut(s) 1136
Kzo9I GATC 5 cut(s) 607, 622, 1099, 1250, 2201
LguI GCTCTTC 2 cut(s) 249, 1122
LmnI GCTCC 3 cut(s) 370, 1558, 1961
Lsp1109I GCAGC 7 cut(s) 297, 430, 531, 985, 1670, 1795, 2048
LweI GCATC 8 cut(s) 436, 999, 1039, 1168, 1198, 1381, 1435, 1474
MaeI CTAG 4 cut(s) 143, 1166, 1182, 2220
MaeII ACGT 2 cut(s) 1906, 2251
MaeIII GTNAC 3 cut(s) 792, 1031, 2230
MalI GATC 5 cut(s) 609, 624, 1101, 1252, 2203
MbiI CCGCTC 1 cut(s) 279
MboI GATC 5 cut(s) 607, 622, 1099, 1250, 2201
MflI RGATCY 2 cut(s) 1250, 2201
MhlI GDGCHC 5 cut(s) 387, 783, 919, 1822, 1958
MlyI GAGTC 2 cut(s) 1789, 2180
MroI TCCGGA 1 cut(s) 1632
MseI TTAA 9 cut(s) 434, 1140, 1266, 1754, 1767, 1866, 2096, 2360, 2394
MslI CAYNNNNRTG 2 cut(s) 102, 2168
MspA1I CMGCKG 1 cut(s) 1135
MspI CCGG 3 cut(s) 214, 1633, 2180
MspR9I CCNGG 3 cut(s) 173, 214, 1271
Mva1269I GAATGC 1 cut(s) 832
MvaI CCWGG 2 cut(s) 173, 1271
MvnI CGCG 3 cut(s) 285, 1135, 1843
NciI CCSGG 1 cut(s) 214
NdeII GATC 5 cut(s) 607, 622, 1099, 1250, 2201
NheI GCTAGC 1 cut(s) 1181
NlaIII CATG 8 cut(s) 107, 166, 604, 907, 1379, 1921, 1963, 2014
NlaIV GGNNCC 3 cut(s) 177, 212, 1413
NmeAIII GCCGAG 3 cut(s) 57, 213, 287
NmuCI GTSAC 2 cut(s) 1031, 2230
NsbI TGCGCA 1 cut(s) 417
NspV TTCGAA 1 cut(s) 836
PceI AGGCCT 1 cut(s) 2110
PciSI GCTCTTC 2 cut(s) 249, 1122
PctI GAATGC 1 cut(s) 832
PfeI GAWTC 9 cut(s) 1109, 1162, 1187, 1220, 1282, 1475, 1629, 2129, 2277
PflFI GACNNNGTC 1 cut(s) 1610
PfoI TCCNGGA 1 cut(s) 212
PleI GAGTC 2 cut(s) 1789, 2180
PpsI GAGTC 2 cut(s) 1789, 2180
Ppu21I YACGTR 2 cut(s) 1907, 2252
Psp124BI GAGCTC 1 cut(s) 387
Psp6I CCWGG 2 cut(s) 171, 1269
PspFI CCCAGC 1 cut(s) 1873
PspGI CCWGG 2 cut(s) 171, 1269
PspN4I GGNNCC 3 cut(s) 177, 212, 1413
PspPI GGNCC 4 cut(s) 146, 175, 210, 2173
PstI CTGCAG 2 cut(s) 1707, 1939
PsuI RGATCY 2 cut(s) 1250, 2201
PsyI GACNNNGTC 1 cut(s) 1610
RsaI GTAC 3 cut(s) 323, 1541, 1698
RsaNI GTAC 3 cut(s) 322, 1540, 1697
RseI CAYNNNNRTG 2 cut(s) 102, 2168
SacI GAGCTC 1 cut(s) 387
SacII CCGCGG 1 cut(s) 1136
SapI GCTCTTC 2 cut(s) 249, 1122
SaqAI TTAA 9 cut(s) 434, 1140, 1266, 1754, 1767, 1866, 2096, 2360, 2394
Sau3AI GATC 5 cut(s) 607, 622, 1099, 1250, 2201
Sau96I GGNCC 4 cut(s) 146, 175, 210, 2173
SchI GAGTC 2 cut(s) 1789, 2180
ScrFI CCNGG 3 cut(s) 173, 214, 1271
SduI GDGCHC 5 cut(s) 387, 783, 919, 1822, 1958
SfaNI GCATC 8 cut(s) 436, 999, 1039, 1168, 1198, 1381, 1435, 1474
SfcI CTRYAG 2 cut(s) 1703, 1935
Sfr303I CCGCGG 1 cut(s) 1136
SfuI TTCGAA 1 cut(s) 836
SgrBI CCGCGG 1 cut(s) 1136
SinI GGWCC 2 cut(s) 210, 2173
SmiMI CAYNNNNRTG 2 cut(s) 102, 2168
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
SseBI AGGCCT 1 cut(s) 2110
SsiI CCGC 7 cut(s) 110, 113, 277, 1133, 1135, 1843, 2333
SspI AATATT 1 cut(s) 698
SspMI CTAG 4 cut(s) 143, 1166, 1182, 2220
SstI GAGCTC 1 cut(s) 387
StuI AGGCCT 1 cut(s) 2110
StyD4I CCNGG 3 cut(s) 171, 212, 1269
TaaI ACNGT 6 cut(s) 792, 1244, 1508, 1864, 1884, 2236
TaiI ACGT 2 cut(s) 1909, 2254
TaqI TCGA 8 cut(s) 57, 198, 225, 354, 396, 836, 1548, 1627
TaqII GACCGA 1 cut(s) 334
TatI WGTACW 1 cut(s) 1696
TauI GCSGC 3 cut(s) 113, 116, 1135
TfiI GAWTC 9 cut(s) 1109, 1162, 1187, 1220, 1282, 1475, 1629, 2129, 2277
Tru1I TTAA 9 cut(s) 434, 1140, 1266, 1754, 1767, 1866, 2096, 2360, 2394
Tru9I TTAA 9 cut(s) 434, 1140, 1266, 1754, 1767, 1866, 2096, 2360, 2394
TscAI CASTG 3 cut(s) 1024, 1249, 1887
TseFI GTSAC 2 cut(s) 1031, 2230
TseI GCWGC 7 cut(s) 310, 418, 544, 973, 1658, 1808, 2036
Tsp45I GTSAC 2 cut(s) 1031, 2230
TspGWI ACGGA 4 cut(s) 25, 1346, 1862, 2122
TspRI CASTG 3 cut(s) 1024, 1249, 1887
Tth111I GACNNNGTC 1 cut(s) 1610
VpaK11BI GGWCC 2 cut(s) 210, 2173
XagI CCTNNNNNAGG 1 cut(s) 928
XapI RAATTY 7 cut(s) 221, 491, 1756, 1830, 1850, 2068, 2155
XbaI TCTAGA 1 cut(s) 1165
XspI CTAG 4 cut(s) 143, 1166, 1182, 2220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.