MD16G1058200.v1.1

Nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0011043
Physical Location & Seq
Reverse (-)
4150294 .. 4156829
6536 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1058200.v1.1.491

Sequence Viewer

Length: 2865 bp
ATGGCGAAACACAAGGAGAAGCATCACCAGAAATCCGTCTCGAAACCCAACCCTTTCGAGGCCAAATCACCAAAACCCGGCAGAGCTGACGCCAATCACAACCATGGGACGGCGGCGGCGGCGAAGAAGAAGAAGAATAAGTTGGGTCCGAACGCCGTCGCCATGAAGCACCAGGCCCCTCCAAAACCTAACCCCTTCGAAACCATTTGGTCCCGGAGGAAATTCGACATTCTCGGCAAAAAGCGCAAAGGCGAAGAGCGCCGAGTTGGCCTCTCCCGCTCTCTCGCCATTGAAAAGAGGAAGAATACGCTGCTGAAGGAGTACGAGCAGAGTAATAAAGCTTCGGTCTTTGTCGATAAGCGAATTGGGGAGCATAATGACGAGCTGGACGAGTTCGATAAGGCCATTCGGCGTGCGCAGCGCGAGCGTCAATTGAAGACGAACAAGAAAAGCAAGTATAACTTATCAGATGGAGAAGAAGACGACTTTGAATTTCAAAGTCTTGGTGCATTATCTGAAAGGGATGATTTTGAGGATGATGGGCTGCCTGTAGATGAAGACGACGGCACAGAAACAACTAAAACTAAGAAAAGATTAGCCATGACAGATCAAATGGACGGTGATCTAATGGAAGGAGAGGAAGATAGACCTAAAAGCAAGAAGGAAGTAATGAAGGAGGTTATGGCAAAAGACAAATATTATAGGGCCGAAAGAGCAAAGGATAAGGAAGAACTTGAAGATTTTAGGCAAGAATTGGACAAATCTTTCACATCTATAGTGCCCTCCAAACTGTTACAAATTGCTGAACCAGAGATGAAGATTCCAAATGAGCATTCAAAGAAGGATGAGCTTTCTGAACAGGAAAAATCCCGCTCTTATTTCAAAACTTTTGGCAACCTAGTCATGGTAAGCCGTGCTCAACCCTCGGACAGGACAAAGACACCTGAAGAGATAGCACAAGAAGAGAGAGAGCAGCTTGAGCATTTGGAGGAAGAGAGACAGAAGAGGATGCTTGCCACTGACGTCAATAGTGACGATGACAATGAAGATGCTGAGACACCATCTAACCAGAAGCCAAGACCCATATCTGGAGACGATCTTGGTGATTCCTTCTCACTTGATGAAGAGCCACAGATTAAAAAGGGTTGGGTTGATGAGATTCTAGAAAGAAAAGATGCTAGTGATTCTGAGAGTGAAGAAGGCGATGCTTCTGAGGATTCAGAAAGTCCTGAGGATGACAGTGAAGGAGCTGATAAAGATATTAATCTAGGTGAAAAGAGTCTATTTATGAAGGACTGGGAACAAAGTGATGATGATAATCTTGGAACGGATTTGGATGAGGAGGAAGAAGAAGAAGATGGGTCTGAAGCACATGAAGAGGATGATGATGCTGATGAAGAAGAGATGGAACCAAGAAAGCTGAAAAAAATGAAAAAAGTTGATGCTTCTGAAGCCAGTAAAAAAGAGGGCGATTTTTCAGATGCCAAGAAAATATCTCAGGACGGTAAACGACCTTCTACTCAATCAGACCTCCCATACCTAATTGAAGCTCCAAAAAGCTTCGAAGAATTAGGTGTATTGGTGGATAATCTTTCTAATGCTGACATTGTCTTGATTATCAATCGAATCCGGAAAAGCAATGCAATCAAGCTTGCAGCAGAAAACCGGAAGAAAATGCAAGTATTTTATGGTGTACTTCTGCAGTATTTTGCCATATTAGCAAATAAAAAGCCGTTGAATATGGAGTTGTTAAATTTTCTGGTTAAGCCATTGATTGAGATGAGTATGGAGACTCCATACTTCGCTGCAATTTGTGCTCGTGAGAGAATTTTACGGGCTCGGACAGAATTTAGTGAGACAGTAAAGAACCCAGAAAAGAGTTGTTGGCCTTCTTCAAAGACATTATTTCTTCTGAGGCTTTGGTCCCTGATATTTCCATGCTCTGATTTTCGTCATGTGGTCATGACTCCAGCAACACTGTTGATGTGTGAATATCTGGCTCGTTGTCCTATCGTGTCTGGTCGTGATACTGCAGTTGGTTCTTTCTTGTGCTCCATGCTTCTCAGTATCACCAAACAATCTCGGAAGTTCTGTCCTGAAGCAGTCATGTTTCTTACAACATTGTTGATGGCAGCTAAAGACAGAAAGCCAGTGGCAAGTCAAAATTCTCAGTTTTGTCATCTTATGGAATTTAAAGCAATCAGGCCTCTTTTATGTATACATGCATCCGTAGGTCAGGTCGATCCTCTGAATTTTCTCACAATAATGGACCTGCCGGAGGACTCCTCTTTTTTCTGCTCTGACAATTTCAGGGCTAGTGTGCTGGTGACGGTGATTGAAACTCTACGTGAGTTTGTCATCATTTATGAAGGATTCAGTTCTTTTCCCGAAATATTTTTGCCAATTTCAGTCTTGTTGCTTGAAGTGGCGGAACAGGAGAATATGCCACAAGTATTAGCAGACAGATTGAAAGATGTTGCTGAACTGATTAAGACAAAAGCAGAAGATAAACATCACATTCTGCGGCAACCACTTCAGATGCGGAAGCAAAAGCCAGTGGCTATCAAAATGCTCAATCCGAAATTTGAGGAGAACTTTGTTAAGGGCAGAGACTATGATCCAGATAGGGAACGAGCCGAGAGAAGAAAGATGAAGAAACTTTTGAAGCAAGAAGCTAAAGGGGCTATTCGTGAACTGCGTAAGGATAATTCTTTCCTATATGAGGTGAAGGCGAGGGATAAGGCGCTGATGGAAGAAGAAAAGGCTGAGAAATATGGAAAAGTTCGACTTTTCCTACAAGAACAAGAACACGCTATGAAGTCTGGGCAATTAGGCAAAGGCAAAGGCAAGAAGAGAAGGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop14

Protein Analysis

955

Amino Acids

109.54

Weight (kDa)

5.56

Isoelectric Point (pI)

50.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop14 PF04147 61 - 937 5.6e-230 Nop14-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011043)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69070 AT1G69070
fragaria_vesca FvH4_4g29570 FvH4_4g29570 FvH4_4g29570
malus_domestica MD13G1058900.v1.1 MD16G1058200.v1.1
prunus_persica Prupe.1G290900_v2.0.a1
pyrus_communis pycom16g05090
rosa_chinensis RchiOBHm_Chr4g0437801
rosa_laevigata RLG00000006412
rosa_multiflora Rmu_sc0004193.1_g000019
rosa_roxburghii Rroxscaffold_5G00378900
rosa_rugosa Rorug04G0303800 Rorug04G0303800
rosa_samantha Rh4AG356100 Rh4BG366700 Rh4CG380700 Rh4DG361200
rosa_wichuraiana Rw4G031410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1026
Acc16I TGCGCA 1 cut(s) 417
Acc36I ACCTGC 1 cut(s) 2280
AccBSI CCGCTC 2 cut(s) 279, 873
AccI GTMKAC 1 cut(s) 2218
AccII CGCG 1 cut(s) 423
AccIII TCCGGA 1 cut(s) 1629
AciI CCGC 8 cut(s) 113, 116, 119, 277, 871, 2429, 2524, 2542
AclWI GGATC 2 cut(s) 2237, 2612
AcsI RAATTY 9 cut(s) 221, 491, 1753, 1827, 1847, 2164, 2189, 2251, 2582
AcuI CTGAAG 6 cut(s) 335, 966, 1386, 1470, 2118, 2519
AcyI GRCGYC 2 cut(s) 90, 1023
AfaI GTAC 2 cut(s) 323, 1695
AfiI CCNNNNNNNGG 8 cut(s) 58, 77, 109, 904, 930, 1088, 2278, 2722
AjnI CCWGG 1 cut(s) 171
AjuI GAANNNNNNNTTGG 4 cut(s) 125, 157, 817, 849
Alw21I GWGCWC 3 cut(s) 919, 1819, 2054
Alw26I GTCTC 7 cut(s) 43, 991, 1049, 1086, 1784, 1850, 2604
AlwI GGATC 2 cut(s) 2237, 2612
Aor13HI TCCGGA 1 cut(s) 1629
AoxI GGCC 7 cut(s) 60, 174, 268, 402, 705, 1886, 2204
ApeKI GCWGC 7 cut(s) 310, 418, 544, 973, 1655, 1805, 2132
ApoI RAATTY 9 cut(s) 221, 491, 1753, 1827, 1847, 2164, 2189, 2251, 2582
AseI ATTAAT 1 cut(s) 1263
AspLEI GCGC 5 cut(s) 246, 261, 418, 423, 2746
AspS9I GGNCC 6 cut(s) 146, 175, 210, 705, 1923, 2269
AsuC2I CCSGG 2 cut(s) 78, 214
AsuHPI GGTGA 9 cut(s) 17, 60, 632, 1115, 1283, 2062, 2338, 2344, 2737
AsuII TTCGAA 2 cut(s) 198, 1563
AvaII GGWCC 4 cut(s) 146, 210, 1923, 2269
AxyI CCTNAGG 1 cut(s) 1230
BaeGI GKGCMC 1 cut(s) 783
BaeI ACNNNNGTAYC 2 cut(s) 2019, 2052
BanII GRGCYC 1 cut(s) 1840
BarI GAAGNNNNNNTAC 4 cut(s) 325, 357, 1498, 1530
BauI CACGAG 1 cut(s) 1818
BbsI GAAGAC 3 cut(s) 443, 486, 564
Bbv12I GWGCWC 3 cut(s) 919, 1819, 2054
BbvI GCAGC 7 cut(s) 297, 430, 531, 985, 1667, 1792, 2144
BccI CCATC 7 cut(s) 464, 533, 1069, 1352, 1399, 2122, 2743
BceAI ACGGC 5 cut(s) 126, 140, 580, 897, 1717
BciT130I CCWGG 1 cut(s) 173
BcnI CCSGG 2 cut(s) 78, 214
BcoDI GTCTC 7 cut(s) 43, 991, 1049, 1086, 1784, 1850, 2604
BfaI CTAG 5 cut(s) 899, 1163, 1179, 1268, 2316
BfmI CTRYAG 4 cut(s) 549, 774, 1700, 2031
BfoI RGCGCY 2 cut(s) 262, 2747
BfuAI ACCTGC 1 cut(s) 2280
BglI GCCNNNNNGGC 1 cut(s) 267
Bme1390I CCNGG 3 cut(s) 78, 173, 214
Bme18I GGWCC 4 cut(s) 146, 210, 1923, 2269
BmgT120I GGNCC 6 cut(s) 146, 175, 210, 705, 1923, 2269
BmiI GGNNCC 5 cut(s) 147, 177, 212, 1410, 1925
BmrFI CCNGG 3 cut(s) 78, 173, 214
BmrI ACTGGG 1 cut(s) 1306
BmuI ACTGGG 1 cut(s) 1306
BpiI GAAGAC 3 cut(s) 443, 486, 564
BplI GAGNNNNNCTC 4 cut(s) 255, 287, 2270, 2302
BpmI CTGGAG 2 cut(s) 1110, 1953
Bpu14I TTCGAA 2 cut(s) 198, 1563
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 2 cut(s) 78, 214
BsaAI YACGTR 1 cut(s) 2348
BsaBI GATNNNNATC 3 cut(s) 1263, 1317, 2511
BsaHI GRCGYC 2 cut(s) 90, 1023
BsaJI CCNNGG 2 cut(s) 103, 924
BsaWI WCCGGW 2 cut(s) 1629, 1665
Bsc4I CCNNNNNNNGG 8 cut(s) 58, 77, 109, 904, 930, 1088, 2278, 2722
Bse1I ACTGG 4 cut(s) 1301, 1455, 2150, 2555
Bse21I CCTNAGG 1 cut(s) 1230
Bse3DI GCAATG 1 cut(s) 1645
Bse8I GATNNNNATC 3 cut(s) 1263, 1317, 2511
BseAI TCCGGA 1 cut(s) 1629
BseBI CCWGG 1 cut(s) 173
BseDI CCNNGG 2 cut(s) 103, 924
BseGI GGATG 8 cut(s) 529, 541, 850, 1014, 1240, 1342, 1387, 2225
BseJI GATNNNNATC 3 cut(s) 1263, 1317, 2511
BseLI CCNNNNNNNGG 8 cut(s) 58, 77, 109, 904, 930, 1088, 2278, 2722
BseMI GCAATG 1 cut(s) 1645
BseMII CTCAG 9 cut(s) 1044, 1179, 1203, 1221, 1511, 1904, 2077, 2183, 2757
BseNI ACTGG 4 cut(s) 1301, 1455, 2150, 2555
BseRI GAGGAG 3 cut(s) 1355, 2275, 2603
BseSI GKGCMC 1 cut(s) 783
BseXI GCAGC 7 cut(s) 297, 430, 531, 985, 1667, 1792, 2144
Bsh1236I CGCG 1 cut(s) 423
BshFI GGCC 7 cut(s) 62, 176, 270, 404, 707, 1888, 2206
BsiHKAI GWGCWC 3 cut(s) 919, 1819, 2054
BsiSI CCGG 5 cut(s) 78, 214, 1630, 1666, 2276
BslFI GGGAC 3 cut(s) 121, 196, 1909
BslI CCNNNNNNNGG 8 cut(s) 58, 77, 109, 904, 930, 1088, 2278, 2722
BsmAI GTCTC 7 cut(s) 43, 991, 1049, 1086, 1784, 1850, 2604
BsmBI CGTCTC 2 cut(s) 43, 1086
BsmFI GGGAC 3 cut(s) 121, 196, 1909
BsmI GAATGC 1 cut(s) 832
BsnI GGCC 7 cut(s) 62, 176, 270, 404, 707, 1888, 2206
Bsp119I TTCGAA 2 cut(s) 198, 1563
Bsp1286I GDGCHC 5 cut(s) 783, 919, 1819, 1840, 2054
Bsp13I TCCGGA 1 cut(s) 1629
Bsp143I GATC 5 cut(s) 607, 622, 1096, 2242, 2617
Bsp19I CCATGG 1 cut(s) 103
BspACI CCGC 8 cut(s) 113, 116, 119, 277, 871, 2429, 2524, 2542
BspANI GGCC 7 cut(s) 62, 176, 270, 404, 707, 1888, 2206
BspCNI CTCAG 9 cut(s) 1045, 1180, 1204, 1222, 1510, 1905, 2076, 2182, 2758
BspEI TCCGGA 1 cut(s) 1629
BspFNI CGCG 1 cut(s) 423
BspHI TCATGA 1 cut(s) 1962
BspLI GGNNCC 5 cut(s) 147, 177, 212, 1410, 1925
BspMAI CTGCAG 2 cut(s) 1704, 2035
BspMI ACCTGC 1 cut(s) 2280
BspPI GGATC 2 cut(s) 2237, 2612
BspQI GCTCTTC 2 cut(s) 249, 1119
BspT104I TTCGAA 2 cut(s) 198, 1563
BsrBI CCGCTC 2 cut(s) 279, 873
BsrDI GCAATG 1 cut(s) 1645
BsrI ACTGG 4 cut(s) 1301, 1455, 2150, 2555
BssECI CCNNGG 2 cut(s) 103, 924
BssMI GATC 5 cut(s) 607, 622, 1096, 2242, 2617
BssNAI GTATAC 1 cut(s) 2219
BssNI GRCGYC 2 cut(s) 90, 1023
BssSI CACGAG 1 cut(s) 1818
BssT1I CCWWGG 1 cut(s) 103
Bst1107I GTATAC 1 cut(s) 2219
Bst2BI CACGAG 1 cut(s) 1818
Bst2UI CCWGG 1 cut(s) 173
Bst4CI ACNGT 7 cut(s) 620, 792, 1241, 1505, 1861, 1980, 2332
Bst6I CTCTTC 9 cut(s) 249, 942, 957, 987, 998, 1119, 1371, 1395, 2846
BstACI GRCGYC 2 cut(s) 90, 1023
BstAPI GCANNNNNTGC 1 cut(s) 1814
BstBAI YACGTR 1 cut(s) 2348
BstBI TTCGAA 2 cut(s) 198, 1563
BstC8I GCNNGC 4 cut(s) 414, 425, 1014, 1653
BstDSI CCRYGG 1 cut(s) 103
BstENI CCTNNNNNAGG 3 cut(s) 928, 2276, 2720
BstF5I GGATG 8 cut(s) 529, 541, 850, 1014, 1240, 1342, 1387, 2225
BstFNI CGCG 1 cut(s) 423
BstH2I RGCGCY 2 cut(s) 262, 2747
BstHHI GCGC 5 cut(s) 246, 261, 418, 423, 2746
BstKTI GATC 5 cut(s) 610, 625, 1099, 2245, 2620
BstMAI GTCTC 7 cut(s) 43, 991, 1049, 1086, 1784, 1850, 2604
BstMBI GATC 5 cut(s) 607, 622, 1096, 2242, 2617
BstNI CCWGG 1 cut(s) 173
BstNSI RCATGY 1 cut(s) 2225
BstSCI CCNGG 3 cut(s) 76, 171, 212
BstSFI CTRYAG 4 cut(s) 549, 774, 1700, 2031
BstSLI GKGCMC 1 cut(s) 783
BstUI CGCG 1 cut(s) 423
BstV1I GCAGC 7 cut(s) 297, 430, 531, 985, 1667, 1792, 2144
BstV2I GAAGAC 3 cut(s) 443, 486, 564
BstZ17I GTATAC 1 cut(s) 2219
Bsu36I CCTNAGG 1 cut(s) 1230
BsuRI GGCC 7 cut(s) 62, 176, 270, 404, 707, 1888, 2206
BtgI CCRYGG 1 cut(s) 103
BtgZI GCGATG 1 cut(s) 1218
BtsCI GGATG 8 cut(s) 529, 541, 850, 1014, 1240, 1342, 1387, 2225
BtsIMutI CAGTG 5 cut(s) 1017, 1246, 1976, 2157, 2562
BveI ACCTGC 1 cut(s) 2280
Cac8I GCNNGC 4 cut(s) 414, 425, 1014, 1653
CciI TCATGA 1 cut(s) 1962
CfoI GCGC 5 cut(s) 246, 261, 418, 423, 2746
Cfr13I GGNCC 6 cut(s) 146, 175, 210, 705, 1923, 2269
CseI GACGC 2 cut(s) 98, 416
Csp6I GTAC 2 cut(s) 322, 1694
CviQI GTAC 2 cut(s) 322, 1694
DpnI GATC 5 cut(s) 609, 624, 1098, 2244, 2619
DpnII GATC 5 cut(s) 607, 622, 1096, 2242, 2617
DraI TTTAAA 1 cut(s) 2194
Eam1104I CTCTTC 9 cut(s) 249, 942, 957, 987, 998, 1119, 1371, 1395, 2846
EarI CTCTTC 9 cut(s) 249, 942, 957, 987, 998, 1119, 1371, 1395, 2846
EciI GGCGGA 1 cut(s) 2444
Eco130I CCWWGG 1 cut(s) 103
Eco147I AGGCCT 1 cut(s) 2206
Eco24I GRGCYC 1 cut(s) 1840
Eco47I GGWCC 4 cut(s) 146, 210, 1923, 2269
Eco57I CTGAAG 6 cut(s) 335, 966, 1386, 1470, 2118, 2519
Eco81I CCTNAGG 1 cut(s) 1230
EcoNI CCTNNNNNAGG 3 cut(s) 928, 2276, 2720
EcoO109I RGGNCCY 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 171
EcoT14I CCWWGG 1 cut(s) 103
EcoT22I ATGCAT 1 cut(s) 2227
EcoT38I GRGCYC 1 cut(s) 1840
ErhI CCWWGG 1 cut(s) 103
Esp3I CGTCTC 2 cut(s) 43, 1086
FalI AAGNNNNNCTT 4 cut(s) 446, 478, 2772, 2804
FaqI GGGAC 3 cut(s) 121, 196, 1909
FauI CCCGC 2 cut(s) 284, 878
FblI GTMKAC 1 cut(s) 2218
FokI GGATG 8 cut(s) 536, 548, 857, 1021, 1247, 1349, 1394, 2212
FriOI GRGCYC 1 cut(s) 1840
FspBI CTAG 5 cut(s) 899, 1163, 1179, 1268, 2316
FspI TGCGCA 1 cut(s) 417
GlaI GCGC 5 cut(s) 245, 260, 417, 422, 2745
GsuI CTGGAG 2 cut(s) 1110, 1953
HaeII RGCGCY 2 cut(s) 262, 2747
HaeIII GGCC 7 cut(s) 62, 176, 270, 404, 707, 1888, 2206
HapII CCGG 5 cut(s) 78, 214, 1630, 1666, 2276
HgaI GACGC 2 cut(s) 98, 416
HhaI GCGC 5 cut(s) 246, 261, 418, 423, 2746
Hin1I GRCGYC 2 cut(s) 90, 1023
Hin6I GCGC 5 cut(s) 244, 259, 416, 421, 2744
HinP1I GCGC 5 cut(s) 244, 259, 416, 421, 2744
HindIII AAGCTT 3 cut(s) 339, 1558, 1649
HpaII CCGG 5 cut(s) 78, 214, 1630, 1666, 2276
HphI GGTGA 9 cut(s) 17, 60, 632, 1115, 1283, 2062, 2338, 2344, 2737
Hpy166II GTNNAC 4 cut(s) 1508, 1694, 2219, 2693
Hpy8I GTNNAC 4 cut(s) 1508, 1694, 2219, 2693
Hpy99I CGWCG 2 cut(s) 161, 566
HpyCH4III ACNGT 7 cut(s) 620, 792, 1241, 1505, 1861, 1980, 2332
HpyCH4IV ACGT 2 cut(s) 1023, 2347
HpyCH4V TGCA 8 cut(s) 509, 1643, 1655, 1678, 1702, 1808, 2033, 2225
HpySE526I ACGT 2 cut(s) 1023, 2347
Hsp92I GRCGYC 2 cut(s) 90, 1023
HspAI GCGC 5 cut(s) 244, 259, 416, 421, 2744
Kpn2I TCCGGA 1 cut(s) 1629
Kzo9I GATC 5 cut(s) 607, 622, 1096, 2242, 2617
LguI GCTCTTC 2 cut(s) 249, 1119
LmnI GCTCC 4 cut(s) 370, 1247, 1555, 2057
Lsp1109I GCAGC 7 cut(s) 297, 430, 531, 985, 1667, 1792, 2144
MaeI CTAG 5 cut(s) 899, 1163, 1179, 1268, 2316
MaeII ACGT 2 cut(s) 1023, 2347
MaeIII GTNAC 3 cut(s) 792, 1031, 2326
MalI GATC 5 cut(s) 609, 624, 1098, 2244, 2619
MbiI CCGCTC 2 cut(s) 279, 873
MboI GATC 5 cut(s) 607, 622, 1096, 2242, 2617
MfeI CAATTG 1 cut(s) 431
MhlI GDGCHC 5 cut(s) 783, 919, 1819, 1840, 2054
MlyI GAGTC 4 cut(s) 1288, 1786, 1960, 2276
Mph1103I ATGCAT 1 cut(s) 2227
MroI TCCGGA 1 cut(s) 1629
MseI TTAA 7 cut(s) 1137, 1263, 1751, 1764, 2193, 2490, 2601
MslI CAYNNNNRTG 2 cut(s) 102, 2264
MspI CCGG 5 cut(s) 78, 214, 1630, 1666, 2276
MspR9I CCNGG 3 cut(s) 78, 173, 214
MteI GCGCNGCGC 1 cut(s) 419
MunI CAATTG 1 cut(s) 431
Mva1269I GAATGC 1 cut(s) 832
MvaI CCWGG 1 cut(s) 173
MvnI CGCG 1 cut(s) 423
NciI CCSGG 2 cut(s) 78, 214
NcoI CCATGG 1 cut(s) 103
NdeII GATC 5 cut(s) 607, 622, 1096, 2242, 2617
NlaIV GGNNCC 5 cut(s) 147, 177, 212, 1410, 1925
NmeAIII GCCGAG 3 cut(s) 213, 287, 2662
NmuCI GTSAC 2 cut(s) 1031, 2326
NsbI TGCGCA 1 cut(s) 417
NsiI ATGCAT 1 cut(s) 2227
NspI RCATGY 1 cut(s) 2225
NspV TTCGAA 2 cut(s) 198, 1563
PagI TCATGA 1 cut(s) 1962
PceI AGGCCT 1 cut(s) 2206
PciSI GCTCTTC 2 cut(s) 249, 1119
PcsI WCGNNNNNNNCGW 2 cut(s) 387, 2695
PctI GAATGC 1 cut(s) 832
PfeI GAWTC 7 cut(s) 820, 1106, 1159, 1184, 1217, 1626, 2373
PflFI GACNNNGTC 1 cut(s) 1607
PfoI TCCNGGA 1 cut(s) 212
PleI GAGTC 4 cut(s) 1287, 1786, 1960, 2276
PpsI GAGTC 4 cut(s) 1287, 1786, 1960, 2276
Ppu21I YACGTR 1 cut(s) 2348
PshBI ATTAAT 1 cut(s) 1263
Psp6I CCWGG 1 cut(s) 171
PspGI CCWGG 1 cut(s) 171
PspN4I GGNNCC 5 cut(s) 147, 177, 212, 1410, 1925
PspPI GGNCC 6 cut(s) 146, 175, 210, 705, 1923, 2269
PstI CTGCAG 2 cut(s) 1704, 2035
PsyI GACNNNGTC 1 cut(s) 1607
RsaI GTAC 2 cut(s) 323, 1695
RsaNI GTAC 2 cut(s) 322, 1694
RseI CAYNNNNRTG 2 cut(s) 102, 2264
SapI GCTCTTC 2 cut(s) 249, 1119
SaqAI TTAA 7 cut(s) 1137, 1263, 1751, 1764, 2193, 2490, 2601
Sau3AI GATC 5 cut(s) 607, 622, 1096, 2242, 2617
Sau96I GGNCC 6 cut(s) 146, 175, 210, 705, 1923, 2269
SchI GAGTC 4 cut(s) 1288, 1786, 1960, 2276
ScrFI CCNGG 3 cut(s) 78, 173, 214
SduI GDGCHC 5 cut(s) 783, 919, 1819, 1840, 2054
SfcI CTRYAG 4 cut(s) 549, 774, 1700, 2031
SfuI TTCGAA 2 cut(s) 198, 1563
SinI GGWCC 4 cut(s) 146, 210, 1923, 2269
SmiMI CAYNNNNRTG 2 cut(s) 102, 2264
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
SseBI AGGCCT 1 cut(s) 2206
SsiI CCGC 8 cut(s) 113, 116, 119, 277, 871, 2429, 2524, 2542
SspI AATATT 2 cut(s) 698, 2394
SspMI CTAG 5 cut(s) 899, 1163, 1179, 1268, 2316
StuI AGGCCT 1 cut(s) 2206
StyD4I CCNGG 3 cut(s) 76, 171, 212
StyI CCWWGG 1 cut(s) 103
TaaI ACNGT 7 cut(s) 620, 792, 1241, 1505, 1861, 1980, 2332
TaiI ACGT 2 cut(s) 1026, 2350
TaqII GACCGA 1 cut(s) 334
TatI WGTACW 1 cut(s) 1693
TauI GCSGC 4 cut(s) 116, 119, 122, 2527
TfiI GAWTC 7 cut(s) 820, 1106, 1159, 1184, 1217, 1626, 2373
Tru1I TTAA 7 cut(s) 1137, 1263, 1751, 1764, 2193, 2490, 2601
Tru9I TTAA 7 cut(s) 1137, 1263, 1751, 1764, 2193, 2490, 2601
TscAI CASTG 5 cut(s) 1024, 1246, 1983, 2157, 2562
TseFI GTSAC 2 cut(s) 1031, 2326
TseI GCWGC 7 cut(s) 310, 418, 544, 973, 1655, 1805, 2132
Tsp45I GTSAC 2 cut(s) 1031, 2326
TspGWI ACGGA 3 cut(s) 25, 1343, 2218
TspRI CASTG 5 cut(s) 1024, 1246, 1983, 2157, 2562
Tth111I GACNNNGTC 1 cut(s) 1607
VpaK11BI GGWCC 4 cut(s) 146, 210, 1923, 2269
VspI ATTAAT 1 cut(s) 1263
XagI CCTNNNNNAGG 3 cut(s) 928, 2276, 2720
XapI RAATTY 9 cut(s) 221, 491, 1753, 1827, 1847, 2164, 2189, 2251, 2582
XbaI TCTAGA 1 cut(s) 1162
XceI RCATGY 1 cut(s) 2225
XmiI GTMKAC 1 cut(s) 2218
XspI CTAG 5 cut(s) 899, 1163, 1179, 1268, 2316
ZraI GACGTC 1 cut(s) 1024
Zsp2I ATGCAT 1 cut(s) 2227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.