FvH4_4g33110

OBERON 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0015295
Physical Location & Seq
Reverse (-)
31436231 .. 31440434
4204 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g33110.t1

Sequence Viewer

Length: 2388 bp
ATGTTTGGTGACAAGGACCGCAGCAACGTTCTCCTTGCCGCCGGAGACGAGGCTTCTCAGAGCAAGGTGACCCGCCACGTCTCTAAGCAACACAACAACAACAACAACAACAACCCGGAAAAGAAGACGGGTCTTAATTTCCTCAGGGGTTCAGACTCCGATGGGTTTCAGTCAAAGTCTAACTTCGGGTCTCAGGAGCTTACCCTGAGCTATCTCTGTGATAACTCCAAGCTGGGATTTCTGGAGAAAGGTAAGGAAATCATGGTCCCCGAGAATCCAAGCCATGATCACAAATGGGTTGAGAGGGATTTCCTCAATCTAAACGAGTCCAGCAGGCCCAACTCTTCAAAGCGTGAGCTTGGTGAAGATGTTGAGAGAGACAATAGAGACAAGAAACCCAAGCTTGAGACTTTGAATCTCTCTCTGGCTCTGCCTCAGGTATCATTATCTCTCACTGCCTCAAACAACGGTGAGCCTTCTATGGCAATAAGGCCCAGGAGTACTGCTATGGCACCTTCAACCAATACATTAACCACTTATTCCAATGATTACACAGCTGCTTCTTTATCTTACTCTTATTCGCATCCCTATTCGCACAATCCAAGTTGCTCTCTGACTCGAAATTCGACAGAGAATTTCGAGTGTTCTGTAGGGAAGGATGATCAAATTTGGAACTGTGGGGAGGGCACTAATGGTTCTGTTCATAGCAGGTTCAAGCCGATTGGGGATGGAGTTGGATTGGCAAATCCTGGGGGGATTTTGTCGATGATGCAGAGTAATAACACTCGAATGGATTCAGGTACTAATAGTCTTTATAGGACAACTAGCTCTGATAATAACCAGTCCTTTTTTCCATCTGAATTGCCTGCTAAGCCTAGAATGGATACTCATAGTGGAGATTCGAGAGGGAGAGGTTCGGAGAGTTTGAGGGGTTTGGAGGGTGGAGATGGGAGAGTTAGGAAGCTTTCTAGGCCGGAGAGAATTCTTCGCGAAATTGTATCCGAGTCTATACCTGTCATGGCTCAGGAGGTTCAGAAGCTTCCTGAGGAAACCCTTTCATCGACTAATGAGTACTTGAGGAATCTGATTGCAATGCCTGAGAAGAAAGAGGAGTTTGTCAGCCTTCAGAAAAGGCTTGAGAGGAGGTCTGATCTTACAAAGGAGAATCTTTCAAAGTGTCACAGGGATCAGTTGGAGATTCTGGTTGCGGTGAAAATGGGGCTTGCGAGCTTTATATCTGGGAAAAACCGCCTTTCGGCAACTGAGCTGATGGAGACTTTCTTGTTTACGAGATGTAGGAATGTCAATTGCAAGAGTTTGTTGCCTGTTGATGATTGTGACTGCAAGATTTGCTCGGGGAATAAGGGGTTTTGTAGTTCATGTATGTGTCCTGTGTGTTTGAATTTTGACTGTGCCAGTAACACCTGTAGTTGGGTTGGATGTGATGTTTGTTCGCATTGGTGCCATGCTGCTTGTGGTATTCAGAAGAATCTCATTAGGCCTGGTCCGAGCTTGAAGGGGCCTTCAGGGACAACGGAGATGCAATTCCATTGCATTGGATGCGGTCATGCTTCGGAAATGTTTGGGTTTGTTAAGGATGTGTTTCTGTGCTGTGCAAAGGACTGGGGACTAGAGACCCTTGTTAAGGAGCTTGACTGTGTTAAGAAAATTTTTAGGAGAAGTGAAGATTTTAAAGGCCGGGAACTGCATATCAAGGCTGATGAGATTATCTCCAAGCTAGGAAGCCAAGTGATGTCTCCTTCAGATGCCTGCAATTTTATTATCCAGTTTTTCAACTATACAGATGGTGTGTCAGAATATCCAGCTTCTAGTATAACCACATCCTCAACCAAAGAGTTGGCAGCTCCTCAAACCAGCCTTAGGAAAGAAGCGACCCTTATTTCACAACCTGCTTCTCTACCTCCAAAATATGCTGCTTACAACACAAGTTCCAGTGTACAATCTGATTTATTGTCAAATGATCTCCGTCAGATTGACTTAAAATCTTCCCTCATTAGTACTGAGGATGAGTTCCGGTTTGGAACAGTACCGAAAATAGAAGGGTTTGACAGTTTGGAAAGCATGGTGAGGATAAAGCATGCTGAAGCTGGAATGTACCAGAGCAAGGCAGACGAAGCACGGAGAGAAGCAGAAGGTTACCGACAGATGATTCGGGAAAATAAAGAGAAGGTGGAGGAAGAGTATGCTGGAAAGTTGTCCGGATTGAGTTTGAAAGAGACAGAGGAAAAGCGAAGGAAGAAACTGGAGGAGCTCAAAGTTTTGGAAGGTTCACATTGTGATTATTACAACATGAAGACAAGGATGCAAGCTGAGATTGCTGGCTTGTTGGCGAAAATGGAAGCGACAAAGCAGCAACAACGGGTGTAG

Protein Analysis

796

Amino Acids

88.54

Weight (kDa)

6.78

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_Oberon PF07227 432 - 556 6.4e-37 PHD - plant homeodomain finger protein
Oberon_cc PF16312 659 - 783 3.7e-40 Coiled-coil region of Oberon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015295)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14740
fragaria_vesca FvH4_4g33110
malus_domestica MD13G1016800.v1.1 MD16G1014700.v1.1
prunus_persica Prupe.1G336600_v2.0.a1
pyrus_communis pycom16g01350
rosa_chinensis RchiOBHm_Chr4g0442161
rosa_laevigata RLG00000006035
rosa_multiflora Rmu_sc0010284.1_g000009
rosa_roxburghii Rroxscaffold_5G00383070
rosa_rugosa Rorug04G0339300
rosa_samantha Rh4AG390900 Rh4BG404500 Rh4CG419500 Rh4DG397400
rosa_wichuraiana Rw4G033780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 699, 1918
AccB1I GGYRCC 2 cut(s) 511, 1461
AccII CGCG 1 cut(s) 990
AccIII TCCGGA 1 cut(s) 2219
AciI CCGC 6 cut(s) 19, 39, 73, 1208, 1249, 1563
AclI AACGTT 1 cut(s) 27
AclWI GGATC 1 cut(s) 1194
AcsI RAATTY 6 cut(s) 622, 634, 666, 981, 1402, 1668
AcuI CTGAAG 4 cut(s) 1109, 1509, 1746, 2124
AdeI CACNNNGTG 1 cut(s) 2297
AfaI GTAC 7 cut(s) 502, 802, 1073, 1959, 2020, 2049, 2117
AfiI CCNNNNNNNGG 5 cut(s) 1255, 1431, 1645, 1881, 2125
AgsI TTSAA 9 cut(s) 348, 415, 519, 715, 1173, 1402, 1516, 1795, 2233
AjiI CACGTC 1 cut(s) 79
AjnI CCWGG 3 cut(s) 494, 748, 1501
Alw21I GWGCWC 1 cut(s) 2274
AlwI GGATC 1 cut(s) 1194
Ama87I CYCGRG 2 cut(s) 269, 1354
Aor13HI TCCGGA 1 cut(s) 2219
AoxI GGCC 6 cut(s) 335, 491, 971, 1499, 1520, 1696
ApeKI GCWGC 6 cut(s) 21, 557, 1469, 1862, 1934, 2371
ApoI RAATTY 6 cut(s) 622, 634, 666, 981, 1402, 1668
ArsI GACNNNNNNTTYG 4 cut(s) 607, 639, 2154, 2186
Asp700I GAANNNNTTC 1 cut(s) 793
AspS9I GGNCC 6 cut(s) 16, 265, 336, 492, 1505, 1520
AsuC2I CCSGG 2 cut(s) 116, 1700
AsuHPI GGTGA 6 cut(s) 20, 79, 374, 482, 1222, 2098
AvaI CYCGRG 2 cut(s) 269, 1354
AvaII GGWCC 3 cut(s) 16, 265, 1505
AxyI CCTNAGG 4 cut(s) 143, 435, 1044, 1880
BaeGI GKGCMC 1 cut(s) 689
BanI GGYRCC 2 cut(s) 511, 1461
BanII GRGCYC 1 cut(s) 2274
BbsI GAAGAC 2 cut(s) 131, 2321
Bbv12I GWGCWC 1 cut(s) 2274
BbvI GCAGC 6 cut(s) 33, 544, 1456, 1874, 1921, 2383
BccI CCATC 6 cut(s) 155, 722, 862, 941, 1264, 1799
BciT130I CCWGG 3 cut(s) 496, 750, 1503
BciVI GTATCC 2 cut(s) 877, 1009
BclI TGATCA 2 cut(s) 286, 661
BcnI CCSGG 2 cut(s) 116, 1700
BfaI CTAG 6 cut(s) 825, 876, 969, 1631, 1739, 1830
BfmI CTRYAG 2 cut(s) 648, 1426
BfuAI ACCTGC 2 cut(s) 699, 1918
BfuI GTATCC 2 cut(s) 877, 1009
BisI GCNGC 7 cut(s) 22, 39, 558, 1470, 1863, 1935, 2372
BlpI GCTNAGC 1 cut(s) 870
BlsI GCNGC 7 cut(s) 23, 40, 559, 1471, 1864, 1936, 2373
BmcAI AGTACT 3 cut(s) 502, 1073, 2020
Bme1390I CCNGG 5 cut(s) 116, 496, 750, 1503, 1700
Bme18I GGWCC 3 cut(s) 16, 265, 1505
BmeT110I CYCGRG 2 cut(s) 269, 1354
BmgBI CACGTC 1 cut(s) 79
BmgT120I GGNCC 6 cut(s) 16, 265, 336, 492, 1505, 1520
BmiI GGNNCC 4 cut(s) 267, 513, 1463, 1521
BmrFI CCNGG 5 cut(s) 116, 496, 750, 1503, 1700
BmrI ACTGGG 1 cut(s) 1633
BmsI GCATC 6 cut(s) 592, 759, 1530, 1550, 1756, 2313
BmuI ACTGGG 1 cut(s) 1633
BpiI GAAGAC 2 cut(s) 131, 2321
BplI GAGNNNNNCTC 2 cut(s) 1715, 1747
BpmI CTGGAG 2 cut(s) 263, 2285
Bpu10I CCTNAGC 2 cut(s) 206, 1023
Bpu1102I GCTNAGC 1 cut(s) 870
BpuEI CTTGAG 3 cut(s) 425, 1096, 1157
BpuMI CCSGG 2 cut(s) 116, 1700
BsaI GGTCTC 2 cut(s) 195, 1628
BsaJI CCNNGG 2 cut(s) 494, 749
BsaWI WCCGGW 2 cut(s) 2034, 2219
BsaXI ACNNNNNCTCC 2 cut(s) 2186, 2216
Bsc4I CCNNNNNNNGG 5 cut(s) 1255, 1431, 1645, 1881, 2125
Bse1I ACTGG 6 cut(s) 841, 1416, 1628, 1786, 1953, 2268
Bse21I CCTNAGG 4 cut(s) 143, 435, 1044, 1880
Bse3DI GCAATG 2 cut(s) 1098, 1549
BseAI TCCGGA 1 cut(s) 2219
BseBI CCWGG 3 cut(s) 496, 750, 1503
BseDI CCNNGG 2 cut(s) 494, 749
BseGI GGATG 9 cut(s) 583, 664, 733, 1445, 1565, 1603, 1841, 2032, 2328
BseLI CCNNNNNNNGG 5 cut(s) 1255, 1431, 1645, 1881, 2125
BseMI GCAATG 2 cut(s) 1098, 1549
BseNI ACTGG 6 cut(s) 841, 1416, 1628, 1786, 1953, 2268
BseRI GAGGAG 4 cut(s) 1124, 1156, 1857, 2282
BseSI GKGCMC 1 cut(s) 689
BseXI GCAGC 6 cut(s) 33, 544, 1456, 1874, 1921, 2383
BseYI CCCAGC 1 cut(s) 232
Bsh1236I CGCG 1 cut(s) 990
BshFI GGCC 6 cut(s) 337, 493, 973, 1501, 1522, 1698
BshNI GGYRCC 2 cut(s) 511, 1461
BsiHKAI GWGCWC 1 cut(s) 2274
BsiHKCI CYCGRG 2 cut(s) 269, 1354
BsiSI CCGG 6 cut(s) 42, 116, 974, 1699, 2035, 2220
BslFI GGGAC 3 cut(s) 251, 1543, 1641
BslI CCNNNNNNNGG 5 cut(s) 1255, 1431, 1645, 1881, 2125
BsmBI CGTCTC 2 cut(s) 39, 85
BsmFI GGGAC 3 cut(s) 251, 1543, 1641
BsnI GGCC 6 cut(s) 337, 493, 973, 1501, 1522, 1698
Bso31I GGTCTC 2 cut(s) 195, 1628
BsoBI CYCGRG 2 cut(s) 269, 1354
Bsp1286I GDGCHC 2 cut(s) 689, 2274
Bsp13I TCCGGA 1 cut(s) 2219
Bsp1407I TGTACA 1 cut(s) 1957
Bsp143I GATC 5 cut(s) 286, 661, 1150, 1186, 1981
Bsp1720I GCTNAGC 1 cut(s) 870
Bsp68I TCGCGA 1 cut(s) 990
BspACI CCGC 6 cut(s) 19, 39, 73, 1208, 1249, 1563
BspANI GGCC 6 cut(s) 337, 493, 973, 1501, 1522, 1698
BspEI TCCGGA 1 cut(s) 2219
BspFNI CGCG 1 cut(s) 990
BspLI GGNNCC 4 cut(s) 267, 513, 1463, 1521
BspMI ACCTGC 2 cut(s) 699, 1918
BspPI GGATC 1 cut(s) 1194
BspT107I GGYRCC 2 cut(s) 511, 1461
BspTNI GGTCTC 2 cut(s) 195, 1628
BsrDI GCAATG 2 cut(s) 1098, 1549
BsrGI TGTACA 1 cut(s) 1957
BsrI ACTGG 6 cut(s) 841, 1416, 1628, 1786, 1953, 2268
BssECI CCNNGG 2 cut(s) 494, 749
BssMI GATC 5 cut(s) 286, 661, 1150, 1186, 1981
Bst2UI CCWGG 3 cut(s) 496, 750, 1503
Bst4CI ACNGT 6 cut(s) 470, 677, 1412, 1658, 2047, 2072
Bst6I CTCTTC 2 cut(s) 349, 2193
BstAPI GCANNNNNTGC 2 cut(s) 1350, 1560
BstAUI TGTACA 1 cut(s) 1957
BstC8I GCNNGC 8 cut(s) 335, 867, 1224, 1228, 1771, 2100, 2328, 2341
BstEII GGTNACC 2 cut(s) 67, 2156
BstENI CCTNNNNNAGG 1 cut(s) 1643
BstF5I GGATG 9 cut(s) 583, 664, 733, 1445, 1565, 1603, 1841, 2032, 2328
BstFNI CGCG 1 cut(s) 990
BstKTI GATC 5 cut(s) 289, 664, 1153, 1189, 1984
BstMBI GATC 5 cut(s) 286, 661, 1150, 1186, 1981
BstMWI GCNNNNNNNGC 6 cut(s) 871, 970, 1350, 1560, 2135, 2336
BstNI CCWGG 3 cut(s) 496, 750, 1503
BstNSI RCATGY 1 cut(s) 2102
BstPI GGTNACC 2 cut(s) 67, 2156
BstSCI CCNGG 5 cut(s) 114, 494, 748, 1501, 1698
BstSFI CTRYAG 2 cut(s) 648, 1426
BstSLI GKGCMC 1 cut(s) 689
BstUI CGCG 1 cut(s) 990
BstV1I GCAGC 6 cut(s) 33, 544, 1456, 1874, 1921, 2383
BstV2I GAAGAC 2 cut(s) 131, 2321
BstXI CCANNNNNNTGG 2 cut(s) 1556, 1858
Bsu36I CCTNAGG 4 cut(s) 143, 435, 1044, 1880
BsuI GTATCC 2 cut(s) 877, 1009
BsuRI GGCC 6 cut(s) 337, 493, 973, 1501, 1522, 1698
BtrI CACGTC 1 cut(s) 79
BtsCI GGATG 9 cut(s) 583, 664, 733, 1445, 1565, 1603, 1841, 2032, 2328
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 2 cut(s) 453, 1960
BtuMI TCGCGA 1 cut(s) 990
BveI ACCTGC 2 cut(s) 699, 1918
Cac8I GCNNGC 8 cut(s) 335, 867, 1224, 1228, 1771, 2100, 2328, 2341
Cfr13I GGNCC 6 cut(s) 16, 265, 336, 492, 1505, 1520
Csp6I GTAC 7 cut(s) 501, 801, 1072, 1958, 2019, 2048, 2116
CviAII CATG 9 cut(s) 262, 284, 1018, 1380, 1466, 1568, 2083, 2099, 2311
CviQI GTAC 7 cut(s) 501, 801, 1072, 1958, 2019, 2048, 2116
DpnI GATC 5 cut(s) 288, 663, 1152, 1188, 1983
DpnII GATC 5 cut(s) 286, 661, 1150, 1186, 1981
DraI TTTAAA 1 cut(s) 1693
DraIII CACNNNGTG 1 cut(s) 2297
Eam1104I CTCTTC 2 cut(s) 349, 2193
EarI CTCTTC 2 cut(s) 349, 2193
Ecl136II GAGCTC 1 cut(s) 2272
Eco147I AGGCCT 1 cut(s) 1501
Eco24I GRGCYC 1 cut(s) 2274
Eco31I GGTCTC 2 cut(s) 195, 1628
Eco47I GGWCC 3 cut(s) 16, 265, 1505
Eco53kI GAGCTC 1 cut(s) 2272
Eco57I CTGAAG 4 cut(s) 1109, 1509, 1746, 2124
Eco81I CCTNAGG 4 cut(s) 143, 435, 1044, 1880
Eco88I CYCGRG 2 cut(s) 269, 1354
Eco91I GGTNACC 2 cut(s) 67, 2156
EcoICRI GAGCTC 1 cut(s) 2272
EcoNI CCTNNNNNAGG 1 cut(s) 1643
EcoO109I RGGNCCY 1 cut(s) 1520
EcoO65I GGTNACC 2 cut(s) 67, 2156
EcoRI GAATTC 1 cut(s) 981
EcoRII CCWGG 3 cut(s) 494, 748, 1501
EcoT38I GRGCYC 1 cut(s) 2274
Esp3I CGTCTC 2 cut(s) 39, 85
FaeI CATG 9 cut(s) 265, 287, 1021, 1383, 1469, 1571, 2086, 2102, 2314
FalI AAGNNNNNCTT 4 cut(s) 167, 199, 1881, 1913
FaqI GGGAC 3 cut(s) 251, 1543, 1641
FatI CATG 9 cut(s) 261, 283, 1017, 1379, 1465, 1567, 2082, 2098, 2310
FauI CCCGC 1 cut(s) 80
FbaI TGATCA 2 cut(s) 286, 661
Fnu4HI GCNGC 7 cut(s) 22, 39, 558, 1470, 1863, 1935, 2372
FokI GGATG 9 cut(s) 570, 671, 740, 1452, 1572, 1610, 1828, 2039, 2335
FriOI GRGCYC 1 cut(s) 2274
Fsp4HI GCNGC 7 cut(s) 22, 39, 558, 1470, 1863, 1935, 2372
FspBI CTAG 6 cut(s) 825, 876, 969, 1631, 1739, 1830
GluI GCNGC 7 cut(s) 22, 39, 558, 1470, 1863, 1935, 2372
GsaI CCCAGC 1 cut(s) 236
GsuI CTGGAG 2 cut(s) 263, 2285
HaeIII GGCC 6 cut(s) 337, 493, 973, 1501, 1522, 1698
HapII CCGG 6 cut(s) 42, 116, 974, 1699, 2035, 2220
Hin1II CATG 9 cut(s) 265, 287, 1021, 1383, 1469, 1571, 2086, 2102, 2314
HindIII AAGCTT 3 cut(s) 401, 962, 1037
HpaII CCGG 6 cut(s) 42, 116, 974, 1699, 2035, 2220
HphI GGTGA 6 cut(s) 20, 79, 374, 482, 1222, 2098
Hpy166II GTNNAC 3 cut(s) 1287, 1958, 2291
Hpy188III TCNNGA 8 cut(s) 194, 242, 903, 989, 1025, 1043, 2174, 2220
Hpy8I GTNNAC 3 cut(s) 1287, 1958, 2291
HpyCH4III ACNGT 6 cut(s) 470, 677, 1412, 1658, 2047, 2072
HpyCH4IV ACGT 2 cut(s) 27, 78
HpyF10VI GCNNNNNNNGC 6 cut(s) 871, 970, 1350, 1560, 2135, 2336
HpySE526I ACGT 2 cut(s) 27, 78
Hsp92II CATG 9 cut(s) 265, 287, 1021, 1383, 1469, 1571, 2086, 2102, 2314
Kpn2I TCCGGA 1 cut(s) 2219
Ksp22I TGATCA 2 cut(s) 286, 661
Kzo9I GATC 5 cut(s) 286, 661, 1150, 1186, 1981
LmnI GCTCC 4 cut(s) 196, 1648, 1870, 2269
Lsp1109I GCAGC 6 cut(s) 33, 544, 1456, 1874, 1921, 2383
LweI GCATC 6 cut(s) 592, 759, 1530, 1550, 1756, 2313
MaeI CTAG 6 cut(s) 825, 876, 969, 1631, 1739, 1830
MaeII ACGT 2 cut(s) 27, 78
MaeIII GTNAC 6 cut(s) 8, 67, 1178, 1337, 1418, 2156
MalI GATC 5 cut(s) 288, 663, 1152, 1188, 1983
MboI GATC 5 cut(s) 286, 661, 1150, 1186, 1981
MfeI CAATTG 1 cut(s) 1306
MhlI GDGCHC 2 cut(s) 689, 2274
MlyI GAGTC 4 cut(s) 149, 335, 610, 1013
MmeI TCCRAC 3 cut(s) 715, 1173, 1417
MroI TCCGGA 1 cut(s) 2219
MroXI GAANNNNTTC 1 cut(s) 793
MseI TTAA 7 cut(s) 135, 530, 1593, 1644, 1662, 1692, 2000
MslI CAYNNNNRTG 2 cut(s) 788, 1384
MspA1I CMGCKG 1 cut(s) 557
MspI CCGG 6 cut(s) 42, 116, 974, 1699, 2035, 2220
MspR9I CCNGG 5 cut(s) 116, 496, 750, 1503, 1700
MunI CAATTG 1 cut(s) 1306
MvaI CCWGG 3 cut(s) 496, 750, 1503
MvnI CGCG 1 cut(s) 990
MwoI GCNNNNNNNGC 6 cut(s) 871, 970, 1350, 1560, 2135, 2336
NciI CCSGG 2 cut(s) 116, 1700
NdeII GATC 5 cut(s) 286, 661, 1150, 1186, 1981
NlaIII CATG 9 cut(s) 265, 287, 1021, 1383, 1469, 1571, 2086, 2102, 2314
NlaIV GGNNCC 4 cut(s) 267, 513, 1463, 1521
NmuCI GTSAC 4 cut(s) 8, 67, 1178, 1337
NruI TCGCGA 1 cut(s) 990
NspI RCATGY 1 cut(s) 2102
PaeI GCATGC 1 cut(s) 2102
PceI AGGCCT 1 cut(s) 1501
PdmI GAANNNNTTC 1 cut(s) 793
PfeI GAWTC 9 cut(s) 274, 415, 794, 899, 1081, 1165, 1198, 1489, 2170
PkrI GCNGC 7 cut(s) 23, 40, 559, 1471, 1864, 1936, 2373
PleI GAGTC 4 cut(s) 149, 334, 610, 1012
PpsI GAGTC 4 cut(s) 149, 334, 610, 1012
Psp124BI GAGCTC 1 cut(s) 2274
Psp1406I AACGTT 1 cut(s) 27
Psp6I CCWGG 3 cut(s) 494, 748, 1501
PspEI GGTNACC 2 cut(s) 67, 2156
PspFI CCCAGC 1 cut(s) 232
PspGI CCWGG 3 cut(s) 494, 748, 1501
PspN4I GGNNCC 4 cut(s) 267, 513, 1463, 1521
PspPI GGNCC 6 cut(s) 16, 265, 336, 492, 1505, 1520
PvuII CAGCTG 1 cut(s) 557
RruI TCGCGA 1 cut(s) 990
RsaI GTAC 7 cut(s) 502, 802, 1073, 1959, 2020, 2049, 2117
RsaNI GTAC 7 cut(s) 501, 801, 1072, 1958, 2019, 2048, 2116
RseI CAYNNNNRTG 2 cut(s) 788, 1384
SacI GAGCTC 1 cut(s) 2274
SaqAI TTAA 7 cut(s) 135, 530, 1593, 1644, 1662, 1692, 2000
SatI GCNGC 7 cut(s) 22, 39, 558, 1470, 1863, 1935, 2372
Sau3AI GATC 5 cut(s) 286, 661, 1150, 1186, 1981
Sau96I GGNCC 6 cut(s) 16, 265, 336, 492, 1505, 1520
ScaI AGTACT 3 cut(s) 502, 1073, 2020
SchI GAGTC 4 cut(s) 149, 335, 610, 1013
ScrFI CCNGG 5 cut(s) 116, 496, 750, 1503, 1700
SduI GDGCHC 2 cut(s) 689, 2274
SfaNI GCATC 6 cut(s) 592, 759, 1530, 1550, 1756, 2313
SfcI CTRYAG 2 cut(s) 648, 1426
SinI GGWCC 3 cut(s) 16, 265, 1505
SmiMI CAYNNNNRTG 2 cut(s) 788, 1384
SmlI CTYRAG 3 cut(s) 404, 1075, 1136
SmoI CTYRAG 3 cut(s) 404, 1075, 1136
SphI GCATGC 1 cut(s) 2102
SseBI AGGCCT 1 cut(s) 1501
SsiI CCGC 6 cut(s) 19, 39, 73, 1208, 1249, 1563
SspMI CTAG 6 cut(s) 825, 876, 969, 1631, 1739, 1830
SstI GAGCTC 1 cut(s) 2274
StuI AGGCCT 1 cut(s) 1501
StyD4I CCNGG 5 cut(s) 114, 494, 748, 1501, 1698
TaaI ACNGT 6 cut(s) 470, 677, 1412, 1658, 2047, 2072
TaiI ACGT 2 cut(s) 30, 81
TaqI TCGA 7 cut(s) 619, 626, 639, 764, 787, 902, 1061
TatI WGTACW 4 cut(s) 500, 1071, 1957, 2018
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 9 cut(s) 274, 415, 794, 899, 1081, 1165, 1198, 1489, 2170
Tru1I TTAA 7 cut(s) 135, 530, 1593, 1644, 1662, 1692, 2000
Tru9I TTAA 7 cut(s) 135, 530, 1593, 1644, 1662, 1692, 2000
TscAI CASTG 2 cut(s) 460, 1960
TseFI GTSAC 4 cut(s) 8, 67, 1178, 1337
TseI GCWGC 6 cut(s) 21, 557, 1469, 1862, 1934, 2371
Tsp45I GTSAC 4 cut(s) 8, 67, 1178, 1337
TspDTI ATGAA 4 cut(s) 692, 1047, 1368, 2327
TspGWI ACGGA 3 cut(s) 1550, 1976, 2155
TspRI CASTG 2 cut(s) 460, 1960
VpaK11BI GGWCC 3 cut(s) 16, 265, 1505
XagI CCTNNNNNAGG 1 cut(s) 1643
XapI RAATTY 6 cut(s) 622, 634, 666, 981, 1402, 1668
XceI RCATGY 1 cut(s) 2102
XcmI CCANNNNNNNNNTGG 1 cut(s) 1472
XmnI GAANNNNTTC 1 cut(s) 793
XspI CTAG 6 cut(s) 825, 876, 969, 1631, 1739, 1830
ZrmI AGTACT 3 cut(s) 502, 1073, 2020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.