Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0015295

Physical Location & Seq

Genomic Coordinates Reverse (-)

852499 .. 855161

Gene Structure 2663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g01350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGCGATCATCCGGCGATGCTGCGGCCCAGCAGAAGCATACAGTCGTTGGCGCCGTCTGCTAACAACACACAGACAACTTGCTCCAATGATTTCACAGCAGCTTCATTGTCGTACTCTTATTCCCACCCATTTTCCCACAACCCCAGTTGCTCGCTTACCCGAAATTCGACGGATTTCGAGTATTCTGTTGGGAAAGATCGATCAAATTTGGAACTGCGGGGAGGGGACTAATGGGTCTGTGCATAGCAGGTTTAAGCCGATTGGAGCCGGAGTCGGTTTGTCGAATCACGGCGGCGGGATTTTGTCGATGATGCAGAGTAATCGTAAGGATTCTTGTAATAATAACAGTGTTCATAGGACAACTAGCTCTGAAAATCTTTCTTTTTTTCCATCTGAGTTGCCTGCTAAGCCGAAAATCGATACCCTTTCCGGGGATTCTAGAGGGAGAGGTTCTGAAAGTTTGAGAGGATTGGAGGGTGTGGATGGTGGTGGGAGAACCAGGAAACTCTCGAGACCGGAGAGAATTCTCCGCGAAATTGTTTCGGTGTCTGTAACTGTCATGGCTCAGACAGTTCAAGAGCTTCCTGAAGAAATACTCTTATCAACAAAAGAATACTTGAAGAATCTGATAGCTGCGCCAGAGAAGAAGGAAGAATTGGTGAGCCTTCAAAACCGGCTTCAGAGAAGGTCTGATCTTACAAAGGAGAATCTCTCTAAATGTCAGAAGGATCAATTGGAGATTTTGGTTGCTGTGAAAATGGGACTTGGGAACTTCGTATCTGGGAAAAACCGCCTTCCAGCAACCGAGCTGGTGGAGATTTTTTCGTTTATGAGGTGTAAGAATGTGAATTGCAAGAGTTTATTGCCCGTTGATGATTGTGACTGCAAGATTTGCTCTGCAAATAAGGGGTTTTGTAGTTCCTGTATGTGTCCTGTATGTTTGAATTTCGACTGTGCCAATAATACTTGTAGTTGGGTTGGCTGTGATGTTTGTTCGCATTGGTGCCACGCTGCTTGTGGTATTCAGAGTAATCTCATTAAACCAGGTCCTAGCTTGAAGGGTCCCTCTGGGACAACTGAGATGCAATTTCATTGCATTGGATGCAGCCATGCTTCGGAAATGTTTGGTTTTGTTAAGGATGTCTTTCTGTGCTGTGCAAAGGACTGGGGACTAGAGACCCTTATCAAGGAGCTTGACTGTGTTAAGAAGATTTTTAGGAGAAGCGATGATTTTAAAGGCCGGGAACTGCATATTAAGGCTGAGGAGATTATTTCCAAGCTTGGAAGCCAGTTGATGTCCCCTTCAGATGCCTGCAATTTCATTATTCAGTTCTTTAATTATACAGATGGAGTATCAGAATATCCTGCTTCTACCATATCCACAAAAGAGTTGAGTGCCTCTCAATCCAGCCTGAGAAAAGATTTGACCCCCTTTTCACAATCCGTTTCTGCACCTCCGAAATATGCTGTTTACAACACAAGTTCTAGTATGCAACGTGATTCACTGTCCAACGATACGCGTCAGAACCCCCTCAAATCATCCCACATAAGCGATGAGGATGAGTTCCAGTTTGGGACATTACCAAAAATAGACGGGTTTGAGAGCTTGGAAAGCTTGGTGAGGATAAAGGAAGCAGAAGCTAGAATGTTCCAGGACAAGGCTGATGAAGCGCGGAGAGAGGCAGAAGGGTACCGTCAGATGATACAAACAAAGACGGAGAAGCTGGAGGAAGAGTATGCCGGAAAGTTTTCCAAATTGTGTCTGAAAGAGACGGAGGAAAAGCGAAGGAAGAAACTGGAGGAGCTGAAAATTTTGGAAAGTTCACATTGTGATTACTACAAGATGAAAACTCGAATGCAAGGCGAGATTGCTGGCTTGTTGGAGAGAATGGAAGCAACAAAACAGCAACGGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009880 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0030154 GO:0032501 GO:0032502 GO:0045165 GO:0048507 GO:0048532 GO:0048856 GO:0048869 GO:0090421

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oberon_cc PHD_Oberon

Protein Analysis

640

Amino Acids

71.61

Weight (kDa)

8.58

Isoelectric Point (pI)

52.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	280 - 404	3.8e-36	PHD - plant homeodomain finger protein
Oberon_cc	PF16312	500 - 628	1.3e-45	Coiled-coil region of Oberon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14740
fragaria_vesca	FvH4_4g33110
malus_domestica	MD13G1016800.v1.1 MD16G1014700.v1.1
prunus_persica	Prupe.1G336600_v2.0.a1
pyrus_communis	pycom16g01350
rosa_chinensis	RchiOBHm_Chr4g0442161
rosa_laevigata	RLG00000006035
rosa_multiflora	Rmu_sc0010284.1_g000009
rosa_roxburghii	Rroxscaffold_5G00383070
rosa_rugosa	Rorug04G0339300
rosa_samantha	Rh4AG390900 Rh4BG404500 Rh4CG419500 Rh4DG397400
rosa_wichuraiana	Rw4G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	235
Acc36I	ACCTGC	1 cut(s)	240
Acc65I	GGTACC	1 cut(s)	1692
AccB1I	GGYRCC	3 cut(s)	51, 1005, 1692
AccII	CGCG	3 cut(s)	534, 1522, 1675
AciI	CCGC	7 cut(s)	24, 219, 294, 297, 532, 793, 1675
AclWI	GGATC	1 cut(s)	738
AcsI	RAATTY	5 cut(s)	165, 207, 525, 946, 1812
AcuI	CTGAAG	3 cut(s)	609, 665, 1290
AcyI	GRCGYC	1 cut(s)	52
AdeI	CACNNNGTG	1 cut(s)	1832
AfaI	GTAC	2 cut(s)	115, 1694
AfiI	CCNNNNNNNGG	5 cut(s)	432, 433, 1117, 1189, 1660
AflIII	ACRYGT	1 cut(s)	1520
AgsI	TTSAA	5 cut(s)	578, 622, 671, 946, 1060
AjnI	CCWGG	3 cut(s)	500, 1045, 1653
AjuI	GAANNNNNNNTTGG	4 cut(s)	641, 673, 719, 751
Alw26I	GTCTC	3 cut(s)	508, 1172, 1766
AlwI	GGATC	1 cut(s)	738
Ama87I	CYCGRG	1 cut(s)	511
AoxI	GGCC	2 cut(s)	25, 1240
ApeKI	GCWGC	5 cut(s)	21, 100, 635, 1013, 1107
ApoI	RAATTY	5 cut(s)	165, 207, 525, 946, 1812
Asp700I	GAANNNNTTC	1 cut(s)	1750
Asp718I	GGTACC	1 cut(s)	1692
AspLEI	GCGC	3 cut(s)	54, 640, 1675
AspS9I	GGNCC	3 cut(s)	26, 1049, 1064
AsuC2I	CCSGG	2 cut(s)	433, 1244
AsuHPI	GGTGA	2 cut(s)	673, 1633
AvaI	CYCGRG	1 cut(s)	511
AvaII	GGWCC	2 cut(s)	1049, 1064
BanI	GGYRCC	3 cut(s)	51, 1005, 1692
BbvCI	CCTCAGC	1 cut(s)	1263
BbvI	GCAGC	5 cut(s)	8, 112, 622, 1000, 1119
BccI	CCATC	3 cut(s)	400, 479, 1343
BceAI	ACGGC	2 cut(s)	39, 307
BcgI	CGANNNNNNTGC	2 cut(s)	305, 339
BciT130I	CCWGG	3 cut(s)	502, 1047, 1655
BcnI	CCSGG	2 cut(s)	433, 1244
BcoDI	GTCTC	3 cut(s)	508, 1172, 1766
BfaI	CTAG	7 cut(s)	366, 441, 1053, 1175, 1488, 1644, 1918
BfoI	RGCGCY	1 cut(s)	55
BfuAI	ACCTGC	1 cut(s)	240
BisI	GCNGC	7 cut(s)	22, 25, 101, 295, 636, 1014, 1108
BlpI	GCTNAGC	1 cut(s)	408
BlsI	GCNGC	7 cut(s)	23, 26, 102, 296, 637, 1015, 1109
Bme1390I	CCNGG	5 cut(s)	433, 502, 1047, 1244, 1655
Bme18I	GGWCC	2 cut(s)	1049, 1064
BmeT110I	CYCGRG	1 cut(s)	511
BmgT120I	GGNCC	3 cut(s)	26, 1049, 1064
BmiI	GGNNCC	6 cut(s)	53, 268, 1007, 1065, 1066, 1694
BmrFI	CCNGG	5 cut(s)	433, 502, 1047, 1244, 1655
BmrI	ACTGGG	2 cut(s)	140, 1177
BmsI	GCATC	5 cut(s)	8, 303, 1074, 1094, 1300
BmuI	ACTGGG	2 cut(s)	140, 1177
BplI	GAGNNNNNCTC	4 cut(s)	698, 730, 1387, 1419
BpmI	CTGGAG	2 cut(s)	1748, 1820
Bpu10I	CCTNAGC	1 cut(s)	1263
Bpu1102I	GCTNAGC	1 cut(s)	408
BpuMI	CCSGG	2 cut(s)	433, 1244
Bsa29I	ATCGAT	2 cut(s)	201, 420
BsaHI	GRCGYC	1 cut(s)	52
BsaI	GGTCTC	2 cut(s)	508, 1172
BsaJI	CCNNGG	1 cut(s)	432
BsaWI	WCCGGW	1 cut(s)	517
BsaXI	ACNNNNNCTCC	4 cut(s)	258, 288, 1721, 1751
Bsc4I	CCNNNNNNNGG	5 cut(s)	432, 433, 1117, 1189, 1660
Bse118I	RCCGGY	1 cut(s)	675
Bse1I	ACTGG	5 cut(s)	146, 1172, 1291, 1570, 1803
Bse3DI	GCAATG	1 cut(s)	1093
BseBI	CCWGG	3 cut(s)	502, 1047, 1655
BseCI	ATCGAT	2 cut(s)	201, 420
BseDI	CCNNGG	1 cut(s)	432
BseGI	GGATG	6 cut(s)	9, 490, 1109, 1147, 1541, 1567
BseLI	CCNNNNNNNGG	5 cut(s)	432, 433, 1117, 1189, 1660
BseMI	GCAATG	1 cut(s)	1093
BseMII	CTCAG	5 cut(s)	387, 581, 1071, 1254, 1406
BseNI	ACTGG	5 cut(s)	146, 1172, 1291, 1570, 1803
BseRI	GAGGAG	2 cut(s)	1280, 1817
BseXI	GCAGC	5 cut(s)	8, 112, 622, 1000, 1119
BseYI	CCCAGC	1 cut(s)	28
BsgI	GTGCAG	1 cut(s)	1437
Bsh1236I	CGCG	3 cut(s)	534, 1522, 1675
BshFI	GGCC	2 cut(s)	27, 1242
BshNI	GGYRCC	3 cut(s)	51, 1005, 1692
BshVI	ATCGAT	2 cut(s)	201, 420
BsiHKCI	CYCGRG	1 cut(s)	511
BsiSI	CCGG	7 cut(s)	13, 270, 432, 518, 676, 1243, 1743
BslFI	GGGAC	7 cut(s)	241, 777, 1050, 1087, 1185, 1285, 1591
BslI	CCNNNNNNNGG	5 cut(s)	432, 433, 1117, 1189, 1660
BsmAI	GTCTC	3 cut(s)	508, 1172, 1766
BsmBI	CGTCTC	1 cut(s)	1766
BsmFI	GGGAC	7 cut(s)	241, 777, 1050, 1087, 1185, 1285, 1591
BsmI	GAATGC	1 cut(s)	1863
BsnI	GGCC	2 cut(s)	27, 1242
Bso31I	GGTCTC	2 cut(s)	508, 1172
BsoBI	CYCGRG	1 cut(s)	511
Bsp143I	GATC	5 cut(s)	6, 198, 202, 694, 730
Bsp1720I	GCTNAGC	1 cut(s)	408
BspACI	CCGC	7 cut(s)	24, 219, 294, 297, 532, 793, 1675
BspANI	GGCC	2 cut(s)	27, 1242
BspCNI	CTCAG	5 cut(s)	388, 580, 1072, 1255, 1407
BspDI	ATCGAT	2 cut(s)	201, 420
BspFNI	CGCG	3 cut(s)	534, 1522, 1675
BspLI	GGNNCC	6 cut(s)	53, 268, 1007, 1065, 1066, 1694
BspMI	ACCTGC	1 cut(s)	240
BspPI	GGATC	1 cut(s)	738
BspT107I	GGYRCC	3 cut(s)	51, 1005, 1692
BspTNI	GGTCTC	2 cut(s)	508, 1172
BsrDI	GCAATG	1 cut(s)	1093
BsrFI	RCCGGY	1 cut(s)	675
BsrI	ACTGG	5 cut(s)	146, 1172, 1291, 1570, 1803
BssAI	RCCGGY	1 cut(s)	675
BssECI	CCNNGG	1 cut(s)	432
BssMI	GATC	5 cut(s)	6, 198, 202, 694, 730
BssNI	GRCGYC	1 cut(s)	52
Bst2UI	CCWGG	3 cut(s)	502, 1047, 1655
Bst4CI	ACNGT	8 cut(s)	44, 350, 559, 574, 956, 1202, 1509, 1697
Bst6I	CTCTTC	1 cut(s)	1728
BstACI	GRCGYC	1 cut(s)	52
BstAPI	GCANNNNNTGC	2 cut(s)	894, 1104
BstC8I	GCNNGC	4 cut(s)	154, 405, 1315, 1876
BstDEI	CTNAG	6 cut(s)	396, 408, 567, 1080, 1263, 1415
BstENI	CCTNNNNNAGG	1 cut(s)	1187
BstF5I	GGATG	6 cut(s)	9, 490, 1109, 1147, 1541, 1567
BstFNI	CGCG	3 cut(s)	534, 1522, 1675
BstH2I	RGCGCY	1 cut(s)	55
BstHHI	GCGC	3 cut(s)	54, 640, 1675
BstKTI	GATC	5 cut(s)	9, 201, 205, 697, 733
BstMAI	GTCTC	3 cut(s)	508, 1172, 1766
BstMBI	GATC	5 cut(s)	6, 198, 202, 694, 730
BstMWI	GCNNNNNNNGC	6 cut(s)	58, 409, 894, 1104, 1614, 1670
BstNI	CCWGG	3 cut(s)	502, 1047, 1655
BstSCI	CCNGG	5 cut(s)	431, 500, 1045, 1242, 1653
BstUI	CGCG	3 cut(s)	534, 1522, 1675
BstV1I	GCAGC	5 cut(s)	8, 112, 622, 1000, 1119
Bsu15I	ATCGAT	2 cut(s)	201, 420
BsuRI	GGCC	2 cut(s)	27, 1242
BsuTUI	ATCGAT	2 cut(s)	201, 420
BtgZI	GCGATG	3 cut(s)	31, 1242, 1569
BtsCI	GGATG	6 cut(s)	9, 490, 1109, 1147, 1541, 1567
BtsIMutI	CAGTG	2 cut(s)	355, 1505
BveI	ACCTGC	1 cut(s)	240
Cac8I	GCNNGC	4 cut(s)	154, 405, 1315, 1876
CfoI	GCGC	3 cut(s)	54, 640, 1675
Cfr10I	RCCGGY	1 cut(s)	675
Cfr13I	GGNCC	3 cut(s)	26, 1049, 1064
ClaI	ATCGAT	2 cut(s)	201, 420
CseI	GACGC	1 cut(s)	1511
CsiI	ACCWGGT	1 cut(s)	1045
Csp6I	GTAC	2 cut(s)	114, 1693
CspCI	CAANNNNNGTGG	2 cut(s)	998, 1033
CviAII	CATG	2 cut(s)	562, 1112
CviQI	GTAC	2 cut(s)	114, 1693
DdeI	CTNAG	6 cut(s)	396, 408, 567, 1080, 1263, 1415
DinI	GGCGCC	1 cut(s)	53
DpnI	GATC	5 cut(s)	8, 200, 204, 696, 732
DpnII	GATC	5 cut(s)	6, 198, 202, 694, 730
DraI	TTTAAA	1 cut(s)	1237
DraIII	CACNNNGTG	1 cut(s)	1832
DrdI	GACNNNNNNGTC	1 cut(s)	235
DseDI	GACNNNNNNGTC	1 cut(s)	235
Eam1104I	CTCTTC	1 cut(s)	1728
EarI	CTCTTC	1 cut(s)	1728
Eco31I	GGTCTC	2 cut(s)	508, 1172
Eco47I	GGWCC	2 cut(s)	1049, 1064
Eco57I	CTGAAG	3 cut(s)	609, 665, 1290
Eco88I	CYCGRG	1 cut(s)	511
EcoNI	CCTNNNNNAGG	1 cut(s)	1187
EcoO109I	RGGNCCY	2 cut(s)	1049, 1064
EcoRI	GAATTC	1 cut(s)	525
EcoRII	CCWGG	3 cut(s)	500, 1045, 1653
EgeI	GGCGCC	1 cut(s)	53
EheI	GGCGCC	1 cut(s)	53
Esp3I	CGTCTC	1 cut(s)	1766
FaeI	CATG	2 cut(s)	565, 1115
FalI	AAGNNNNNCTT	2 cut(s)	1130, 1162
FaqI	GGGAC	7 cut(s)	241, 777, 1050, 1087, 1185, 1285, 1591
FatI	CATG	2 cut(s)	561, 1111
FauI	CCCGC	2 cut(s)	212, 290
Fnu4HI	GCNGC	7 cut(s)	22, 25, 101, 295, 636, 1014, 1108
FokI	GGATG	5 cut(s)	497, 1116, 1154, 1528, 1574
Fsp4HI	GCNGC	7 cut(s)	22, 25, 101, 295, 636, 1014, 1108
FspBI	CTAG	7 cut(s)	366, 441, 1053, 1175, 1488, 1644, 1918
GlaI	GCGC	3 cut(s)	53, 639, 1674
GluI	GCNGC	7 cut(s)	22, 25, 101, 295, 636, 1014, 1108
GsaI	CCCAGC	1 cut(s)	32
GsuI	CTGGAG	2 cut(s)	1748, 1820
HaeII	RGCGCY	1 cut(s)	55
HaeIII	GGCC	2 cut(s)	27, 1242
HapII	CCGG	7 cut(s)	13, 270, 432, 518, 676, 1243, 1743
HgaI	GACGC	1 cut(s)	1511
HhaI	GCGC	3 cut(s)	54, 640, 1675
Hin1I	GRCGYC	1 cut(s)	52
Hin1II	CATG	2 cut(s)	565, 1115
Hin6I	GCGC	3 cut(s)	52, 638, 1673
HinP1I	GCGC	3 cut(s)	52, 638, 1673
HindIII	AAGCTT	2 cut(s)	1280, 1615
HinfI	GANTC	7 cut(s)	273, 286, 332, 437, 625, 709, 1502
HpaII	CCGG	7 cut(s)	13, 270, 432, 518, 676, 1243, 1743
HphI	GGTGA	2 cut(s)	673, 1633
Hpy166II	GTNNAC	2 cut(s)	1474, 1826
Hpy188III	TCNNGA	5 cut(s)	441, 511, 513, 578, 587
Hpy8I	GTNNAC	2 cut(s)	1474, 1826
Hpy99I	CGWCG	1 cut(s)	174
HpyAV	CCTTC	9 cut(s)	643, 677, 681, 721, 806, 1054, 1314, 1682, 1782
HpyCH4III	ACNGT	8 cut(s)	44, 350, 559, 574, 956, 1202, 1509, 1697
HpyCH4IV	ACGT	1 cut(s)	1498
HpyF10VI	GCNNNNNNNGC	6 cut(s)	58, 409, 894, 1104, 1614, 1670
HpyF3I	CTNAG	6 cut(s)	396, 408, 567, 1080, 1263, 1415
HpySE526I	ACGT	1 cut(s)	1498
Hsp92I	GRCGYC	1 cut(s)	52
Hsp92II	CATG	2 cut(s)	565, 1115
HspAI	GCGC	3 cut(s)	52, 638, 1673
KasI	GGCGCC	1 cut(s)	51
KflI	GGGWCCC	1 cut(s)	1064
KpnI	GGTACC	1 cut(s)	1696
Kzo9I	GATC	5 cut(s)	6, 198, 202, 694, 730
LmnI	GCTCC	4 cut(s)	88, 266, 1192, 1804
Lsp1109I	GCAGC	5 cut(s)	8, 112, 622, 1000, 1119
LweI	GCATC	5 cut(s)	8, 303, 1074, 1094, 1300
MabI	ACCWGGT	1 cut(s)	1045
MaeI	CTAG	7 cut(s)	366, 441, 1053, 1175, 1488, 1644, 1918
MaeII	ACGT	1 cut(s)	1498
MaeIII	GTNAC	2 cut(s)	553, 881
MalI	GATC	5 cut(s)	8, 200, 204, 696, 732
MboI	GATC	5 cut(s)	6, 198, 202, 694, 730
MboII	GAAGA	7 cut(s)	602, 634, 658, 665, 1222, 1745, 1804
MfeI	CAATTG	1 cut(s)	734
MluI	ACGCGT	1 cut(s)	1520
Mly113I	GGCGCC	1 cut(s)	52
MlyI	GAGTC	1 cut(s)	282
MmeI	TCCRAC	2 cut(s)	1536, 1863
MroXI	GAANNNNTTC	1 cut(s)	1750
MseI	TTAA	7 cut(s)	255, 1041, 1137, 1206, 1236, 1257, 1338
MspI	CCGG	7 cut(s)	13, 270, 432, 518, 676, 1243, 1743
MspR9I	CCNGG	5 cut(s)	433, 502, 1047, 1244, 1655
MunI	CAATTG	1 cut(s)	734
Mva1269I	GAATGC	1 cut(s)	1863
MvaI	CCWGG	3 cut(s)	502, 1047, 1655
MvnI	CGCG	3 cut(s)	534, 1522, 1675
MwoI	GCNNNNNNNGC	6 cut(s)	58, 409, 894, 1104, 1614, 1670
NarI	GGCGCC	1 cut(s)	52
NciI	CCSGG	2 cut(s)	433, 1244
NdeII	GATC	5 cut(s)	6, 198, 202, 694, 730
NlaIII	CATG	2 cut(s)	565, 1115
NlaIV	GGNNCC	6 cut(s)	53, 268, 1007, 1065, 1066, 1694
NmuCI	GTSAC	1 cut(s)	881
PaeR7I	CTCGAG	1 cut(s)	511
PcsI	WCGNNNNNNNCGW	1 cut(s)	52
PctI	GAATGC	1 cut(s)	1863
PdmI	GAANNNNTTC	1 cut(s)	1750
PfeI	GAWTC	6 cut(s)	286, 332, 437, 625, 709, 1502
PfoI	TCCNGGA	1 cut(s)	1653
PkrI	GCNGC	7 cut(s)	23, 26, 102, 296, 637, 1015, 1109
PleI	GAGTC	1 cut(s)	281
PluTI	GGCGCC	1 cut(s)	55
PpsI	GAGTC	1 cut(s)	281
PpuMI	RGGWCCY	2 cut(s)	1049, 1064
Psp5II	RGGWCCY	2 cut(s)	1049, 1064
Psp6I	CCWGG	3 cut(s)	500, 1045, 1653
PspFI	CCCAGC	1 cut(s)	28
PspGI	CCWGG	3 cut(s)	500, 1045, 1653
PspN4I	GGNNCC	6 cut(s)	53, 268, 1007, 1065, 1066, 1694
PspPI	GGNCC	3 cut(s)	26, 1049, 1064
PspPPI	RGGWCCY	2 cut(s)	1049, 1064
RsaI	GTAC	2 cut(s)	115, 1694
RsaNI	GTAC	2 cut(s)	114, 1693
SaqAI	TTAA	7 cut(s)	255, 1041, 1137, 1206, 1236, 1257, 1338
SatI	GCNGC	7 cut(s)	22, 25, 101, 295, 636, 1014, 1108
Sau3AI	GATC	5 cut(s)	6, 198, 202, 694, 730
Sau96I	GGNCC	3 cut(s)	26, 1049, 1064
SchI	GAGTC	1 cut(s)	282
ScrFI	CCNGG	5 cut(s)	433, 502, 1047, 1244, 1655
SexAI	ACCWGGT	1 cut(s)	1045
SfaNI	GCATC	5 cut(s)	8, 303, 1074, 1094, 1300
SfoI	GGCGCC	1 cut(s)	53
Sfr274I	CTCGAG	1 cut(s)	511
SinI	GGWCC	2 cut(s)	1049, 1064
SlaI	CTCGAG	1 cut(s)	511
SmlI	CTYRAG	1 cut(s)	511
SmoI	CTYRAG	1 cut(s)	511
SsiI	CCGC	7 cut(s)	24, 219, 294, 297, 532, 793, 1675
SspDI	GGCGCC	1 cut(s)	51
SspMI	CTAG	7 cut(s)	366, 441, 1053, 1175, 1488, 1644, 1918
StyD4I	CCNGG	5 cut(s)	431, 500, 1045, 1242, 1653
TaaI	ACNGT	8 cut(s)	44, 350, 559, 574, 956, 1202, 1509, 1697
TaiI	ACGT	1 cut(s)	1501
TaqI	TCGA	9 cut(s)	169, 179, 201, 284, 308, 420, 512, 951, 1855
TauI	GCSGC	2 cut(s)	27, 297
TfiI	GAWTC	6 cut(s)	286, 332, 437, 625, 709, 1502
Tru1I	TTAA	7 cut(s)	255, 1041, 1137, 1206, 1236, 1257, 1338
Tru9I	TTAA	7 cut(s)	255, 1041, 1137, 1206, 1236, 1257, 1338
TscAI	CASTG	2 cut(s)	355, 1512
TseFI	GTSAC	1 cut(s)	881
TseI	GCWGC	5 cut(s)	21, 100, 635, 1013, 1107
Tsp45I	GTSAC	1 cut(s)	881
TspDTI	ATGAA	6 cut(s)	95, 344, 1082, 1312, 1683, 1862
TspGWI	ACGGA	4 cut(s)	187, 1435, 1733, 1790
TspRI	CASTG	2 cut(s)	355, 1512
VpaK11BI	GGWCC	2 cut(s)	1049, 1064
XagI	CCTNNNNNAGG	1 cut(s)	1187
XapI	RAATTY	5 cut(s)	165, 207, 525, 946, 1812
XbaI	TCTAGA	1 cut(s)	440
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1016
XhoI	CTCGAG	1 cut(s)	511
XmnI	GAANNNNTTC	1 cut(s)	1750
XspI	CTAG	7 cut(s)	366, 441, 1053, 1175, 1488, 1644, 1918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.