RLG00000006035

OBERON 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0015295
Physical Location & Seq
Forward (+)
3767425 .. 3770854
3430 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006035

Sequence Viewer

Length: 2427 bp
ATGTTTGGTGACAAGGACCGCAGTAGTGCTCTGCTGGCCGCCGGTGACGAGGCTTCTCAGAGCAAGGTGACGCGCCACGTCTCCAAGCAAAGCAAGGACTACAACGACCCGGAAAAGAAAGCGGGTCTTAATTTTCTGAGGGATTCAGGCTCTGATGGGTTTCAATCAAAGCCTTGCTCTAATTTTGGGTCGTCTCAGGAGCTGACCCTGAGCTATCTCTGTGATAATTCCAAGCTGGGTTTTCTGGAGAAAGAGTTTTCCGGCAAGAATCTGTTGACTTCTTTGGAGAAAGGTAAGGAAATCTTAGTTCCCGAGAATTCAAGCCAAGATCACAAGTGGGTTGAGAGGGATTTCCTCAATTTAAACGAGACCAGGCTCAATTCCTCAAAACGTGAGCTTGGTGAAGATGTTGAGGGAGACAATAGGGAGAAGAAGCCAAAGCTTGAGACTTTGAATCTCTCTCTCGCCTTGCCTCAGGTCTCACTCTCTCTCACTGCCTCAAACGCTTTGCAAAACGGTGAGCCTTCTATGGTGAGGCCCAGGAGTACTATGGCGCCTTCCACCAATACGTTAACCACTTATTCCAATGATTACACAGCTGCTTCTTTATCCTACTCTTATTCGCATCCCTATTCACACAATCCAAGTTGCTCGCTGACTCGAAATTCGACAGAGAATTTCGAGTATTCTGTTGGGAAGGATGATCAAATTTGGAACTGTGGGGAGGGCACTAATGGTTCTGTTCATAGCAGGTTCAAGCCCATTGGGGATGGAGTTGGTTTGGCAAATCCTGGTGGGATTCTGTCGATGATGCAGAGTAATAATCGAAAGGATTCAGGTACTAATAGTCTTTATAGGACAACTAGCTCTGATAATAACCAGTCTTTTTTTCCATCTGAGTTGCCTGCTAAGCCTAGAATTGATACTCATTCTGGAGATTCGAGAGGGAGGGGTTCGGACAGTTTGAGAGGTTTGGAGGGTGGAGAATTCTTCGCCAGAGAGAATTCTAGGCCAGAGAGAATTCTTCGCGAAATTGTTTCCAAGTCTATACCTGTCATGGCTCAGGTGGTTCAGGAGCTTCATGAGGAAACACTTTTATCCACTAATGAGTACTTGAGGAATCTCATTTCAATGCCTGAGAAGAAAGATGAGTTGGTGAGCCTTCAGAAAAGGCTTGAGAGGAGGTCTGATCTTACAAAGGAGAATCTGTCAAAGTGTCAGAAGGATCAATTGGAGATTCTGGTTGCGGTGAAAATGGGGCTTGCGAGCTTTGTATCTGGGAAAAACCGCCTTTCGGCAACTGAGTTGGTGGAGACTTTCTTGTTTATGAGATGTAGGAACGTGAATTGCAAGAGTTTGTTGCCTGTTGATGATTGTGACTGCAAGATTTGCTCAGGAAATAAGGGGTTTTGTAGTTCATGTATGTGTCCTGTTTGTTTGAATTTTGACTGTGCTAGTAACACTTGTAGTTGGGTTGGATGTGATGTTTGTTCGCATTGGTGCCATGCTGCTTGCGGTATTCAGAAGAATCTCATTAAGCCAGGTCCGAGCTTGAAGGGGCCTTCTGGGACAACGGAGATGCAATTCCATTGCATTGGATGCAGTCATGCTTCGGAAATGTTTGGGTTTGTTAAGGATGTGTTTCTGTGCTGTGCAAAGGACTGGGGACTAGAGACCCTTGTGAAGGAGCTTGACTGTGTGAAAAAGATTTTTAGGAGAAGTGAAGATTTTAAAGGCCGTGAACTGCATATCAAGGCTGAGGAGATTATCTCCAAGCTAGGAAGCCAAGTGATGTCTCCTTCAGATGCCTGCAATTTTATTATCCAGTTTTTCAACTATACAGATGGAGTGTCAGAATATCCAGCTTCTAGTATAACCACATCCTCAACAAAGGAGTTGGCAACTCCTCAAACCAGCCTTAGGAAAGAAGCAACCCTTTTTTCACAACCTGCTTCTCTACCTCCAAAATATGCTGCTTACAACACAAGTTCCAGTGTACAATCTGATTTATTGTCAAATGATCTCCGTCAGATTGACCTAAAATCTTCCCTCATAAGCACTGAGGATGAGTTCCGTTTTGGAACAGTACCGAAAATAGAAGGGTTTGACAGTTTGGAAAGCATGGTGAGGATAAAGCAAGCTGAAGCTAGAATGTACCAGAGCAAGGCAGACGAAGCACGGAGAGAGGCAGAAGGTTACCAGCAGATGATTCGGGAAAATACAGAGAAGGTGGAGGAAGAGTATGCTGGAAAGTTTTCCGAATTGTGTCTGCAAGAGACGGAGGAAAAGCGAAGGAAGAAACTGGAGGAGCTCAAAGTTTTGGAAGGTTCACATTGTGATTATTACAACATGAAGACTAGGATGCAAGCCGAAATTGCTGGCTTGTTGGCAAAAATGGAAGCGACAAAGCAGCAACAACGGGTGTAG

Protein Analysis

809

Amino Acids

90.13

Weight (kDa)

6.05

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_Oberon PF07227 445 - 569 1.7e-36 PHD - plant homeodomain finger protein
Oberon_cc PF16312 672 - 796 5.7e-42 Coiled-coil region of Oberon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015295)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14740
fragaria_vesca FvH4_4g33110
malus_domestica MD13G1016800.v1.1 MD16G1014700.v1.1
prunus_persica Prupe.1G336600_v2.0.a1
pyrus_communis pycom16g01350
rosa_chinensis RchiOBHm_Chr4g0442161
rosa_laevigata RLG00000006035
rosa_multiflora Rmu_sc0010284.1_g000009
rosa_roxburghii Rroxscaffold_5G00383070
rosa_rugosa Rorug04G0339300
rosa_samantha Rh4AG390900 Rh4BG404500 Rh4CG419500 Rh4DG397400
rosa_wichuraiana Rw4G033780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 741, 1957
AccB1I GGYRCC 2 cut(s) 553, 1500
AccII CGCG 2 cut(s) 73, 1029
AciI CCGC 6 cut(s) 19, 39, 122, 1247, 1288, 1515
AclWI GGATC 1 cut(s) 1233
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 8 cut(s) 316, 664, 676, 708, 986, 1003, 1020, 1441
AcuI CTGAAG 3 cut(s) 1148, 1785, 2163
AcyI GRCGYC 1 cut(s) 554
AdeI CACNNNGTG 1 cut(s) 2336
AfaI GTAC 6 cut(s) 547, 841, 1112, 1998, 2088, 2156
AfiI CCNNNNNNNGG 4 cut(s) 1294, 1684, 1920, 2164
AgsI TTSAA 8 cut(s) 164, 321, 454, 757, 1131, 1441, 1555, 1834
AjiI CACGTC 1 cut(s) 79
AjnI CCWGG 4 cut(s) 371, 539, 790, 1540
AjuI GAANNNNNNNTTGG 4 cut(s) 1136, 1168, 1214, 1246
Alw21I GWGCWC 2 cut(s) 31, 2313
AlwI GGATC 1 cut(s) 1233
AlwNI CAGNNNCTG 2 cut(s) 152, 202
Ama87I CYCGRG 1 cut(s) 311
AoxI GGCC 5 cut(s) 36, 536, 1010, 1559, 1735
ApeKI GCWGC 4 cut(s) 599, 1508, 1973, 2410
ApoI RAATTY 8 cut(s) 316, 664, 676, 708, 986, 1003, 1020, 1441
ArsI GACNNNNNNTTYG 2 cut(s) 649, 681
Asp700I GAANNNNTTC 2 cut(s) 832, 2254
AspLEI GCGC 2 cut(s) 75, 556
AspS9I GGNCC 4 cut(s) 16, 537, 1544, 1559
AsuC2I CCSGG 1 cut(s) 110
AsuHPI GGTGA 9 cut(s) 20, 56, 79, 413, 530, 544, 1168, 1261, 2137
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 2 cut(s) 16, 1544
AxyI CCTNAGG 2 cut(s) 474, 1919
BaeGI GKGCMC 1 cut(s) 731
BanI GGYRCC 2 cut(s) 553, 1500
BanII GRGCYC 1 cut(s) 2313
BbsI GAAGAC 1 cut(s) 2360
Bbv12I GWGCWC 2 cut(s) 31, 2313
BbvCI CCTCAGC 1 cut(s) 1758
BbvI GCAGC 4 cut(s) 586, 1495, 1960, 2422
BccI CCATC 4 cut(s) 149, 764, 901, 1838
BceAI ACGGC 1 cut(s) 1722
BcgI CGANNNNNNTGC 2 cut(s) 2192, 2226
BciT130I CCWGG 4 cut(s) 373, 541, 792, 1542
BclI TGATCA 1 cut(s) 703
BcnI CCSGG 1 cut(s) 110
BfaI CTAG 9 cut(s) 864, 915, 1008, 1455, 1670, 1778, 1869, 2148, 2358
BfoI RGCGCY 1 cut(s) 557
BfuAI ACCTGC 2 cut(s) 741, 1957
BisI GCNGC 5 cut(s) 39, 600, 1509, 1974, 2411
BlpI GCTNAGC 1 cut(s) 909
BlsI GCNGC 5 cut(s) 40, 601, 1510, 1975, 2412
BmcAI AGTACT 2 cut(s) 547, 1112
Bme1390I CCNGG 5 cut(s) 110, 373, 541, 792, 1542
Bme18I GGWCC 2 cut(s) 16, 1544
BmeT110I CYCGRG 1 cut(s) 311
BmgBI CACGTC 1 cut(s) 79
BmgT120I GGNCC 4 cut(s) 16, 537, 1544, 1559
BmiI GGNNCC 3 cut(s) 555, 1502, 1560
BmrFI CCNGG 5 cut(s) 110, 373, 541, 792, 1542
BmrI ACTGGG 1 cut(s) 1672
BmsI GCATC 6 cut(s) 634, 801, 1569, 1589, 1795, 2352
BmuI ACTGGG 1 cut(s) 1672
BpiI GAAGAC 1 cut(s) 2360
BplI GAGNNNNNCTC 2 cut(s) 1754, 1786
BpmI CTGGAG 3 cut(s) 266, 954, 2324
Bpu10I CCTNAGC 4 cut(s) 209, 1062, 1393, 1758
Bpu1102I GCTNAGC 1 cut(s) 909
BpuEI CTTGAG 3 cut(s) 464, 1135, 1196
BpuMI CCSGG 1 cut(s) 110
BsaHI GRCGYC 1 cut(s) 554
BsaI GGTCTC 3 cut(s) 362, 484, 1667
BsaJI CCNNGG 1 cut(s) 539
BsaXI ACNNNNNCTCC 6 cut(s) 239, 269, 1193, 1223, 2225, 2255
Bsc4I CCNNNNNNNGG 4 cut(s) 1294, 1684, 1920, 2164
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 5 cut(s) 880, 1667, 1825, 1992, 2307
Bse21I CCTNAGG 2 cut(s) 474, 1919
Bse3DI GCAATG 1 cut(s) 1588
BseBI CCWGG 4 cut(s) 373, 541, 792, 1542
BseDI CCNNGG 1 cut(s) 539
BseGI GGATG 9 cut(s) 625, 706, 775, 1484, 1604, 1642, 1880, 2071, 2367
BseLI CCNNNNNNNGG 4 cut(s) 1294, 1684, 1920, 2164
BseMI GCAATG 1 cut(s) 1588
BseNI ACTGG 5 cut(s) 880, 1667, 1825, 1992, 2307
BseRI GAGGAG 4 cut(s) 1195, 1775, 1896, 2321
BseSI GKGCMC 1 cut(s) 731
BseXI GCAGC 4 cut(s) 586, 1495, 1960, 2422
BseYI CCCAGC 1 cut(s) 235
Bsh1236I CGCG 2 cut(s) 73, 1029
BshFI GGCC 5 cut(s) 38, 538, 1012, 1561, 1737
BshNI GGYRCC 2 cut(s) 553, 1500
BsiHKAI GWGCWC 2 cut(s) 31, 2313
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 3 cut(s) 42, 110, 261
BslFI GGGAC 2 cut(s) 1582, 1680
BslI CCNNNNNNNGG 4 cut(s) 1294, 1684, 1920, 2164
BsmBI CGTCTC 3 cut(s) 85, 198, 2270
BsmFI GGGAC 2 cut(s) 1582, 1680
BsnI GGCC 5 cut(s) 38, 538, 1012, 1561, 1737
Bso31I GGTCTC 3 cut(s) 362, 484, 1667
BsoBI CYCGRG 1 cut(s) 311
Bsp1286I GDGCHC 3 cut(s) 31, 731, 2313
Bsp1407I TGTACA 1 cut(s) 1996
Bsp143I GATC 5 cut(s) 328, 703, 1189, 1225, 2020
Bsp1720I GCTNAGC 1 cut(s) 909
Bsp68I TCGCGA 1 cut(s) 1029
BspACI CCGC 6 cut(s) 19, 39, 122, 1247, 1288, 1515
BspANI GGCC 5 cut(s) 38, 538, 1012, 1561, 1737
BspFNI CGCG 2 cut(s) 73, 1029
BspHI TCATGA 1 cut(s) 1081
BspLI GGNNCC 3 cut(s) 555, 1502, 1560
BspMI ACCTGC 2 cut(s) 741, 1957
BspPI GGATC 1 cut(s) 1233
BspT107I GGYRCC 2 cut(s) 553, 1500
BspTNI GGTCTC 3 cut(s) 362, 484, 1667
BsrDI GCAATG 1 cut(s) 1588
BsrFI RCCGGY 1 cut(s) 41
BsrGI TGTACA 1 cut(s) 1996
BsrI ACTGG 5 cut(s) 880, 1667, 1825, 1992, 2307
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 1 cut(s) 539
BssMI GATC 5 cut(s) 328, 703, 1189, 1225, 2020
BssNI GRCGYC 1 cut(s) 554
Bst2UI CCWGG 4 cut(s) 373, 541, 792, 1542
Bst4CI ACNGT 7 cut(s) 518, 719, 962, 1451, 1697, 2086, 2111
Bst6I CTCTTC 1 cut(s) 2232
BstACI GRCGYC 1 cut(s) 554
BstAPI GCANNNNNTGC 2 cut(s) 1389, 1599
BstAUI TGTACA 1 cut(s) 1996
BstEII GGTNACC 1 cut(s) 2195
BstENI CCTNNNNNAGG 1 cut(s) 1682
BstF5I GGATG 9 cut(s) 625, 706, 775, 1484, 1604, 1642, 1880, 2071, 2367
BstFNI CGCG 2 cut(s) 73, 1029
BstH2I RGCGCY 1 cut(s) 557
BstHHI GCGC 2 cut(s) 75, 556
BstKTI GATC 5 cut(s) 331, 706, 1192, 1228, 2023
BstMBI GATC 5 cut(s) 328, 703, 1189, 1225, 2020
BstMWI GCNNNNNNNGC 7 cut(s) 35, 503, 910, 1389, 1599, 2174, 2375
BstNI CCWGG 4 cut(s) 373, 541, 792, 1542
BstPI GGTNACC 1 cut(s) 2195
BstSCI CCNGG 5 cut(s) 108, 371, 539, 790, 1540
BstSLI GKGCMC 1 cut(s) 731
BstUI CGCG 2 cut(s) 73, 1029
BstV1I GCAGC 4 cut(s) 586, 1495, 1960, 2422
BstV2I GAAGAC 1 cut(s) 2360
BstXI CCANNNNNNTGG 1 cut(s) 1595
Bsu36I CCTNAGG 2 cut(s) 474, 1919
BsuRI GGCC 5 cut(s) 38, 538, 1012, 1561, 1737
BtrI CACGTC 1 cut(s) 79
BtsCI GGATG 9 cut(s) 625, 706, 775, 1484, 1604, 1642, 1880, 2071, 2367
BtsI GCAGTG 1 cut(s) 492
BtsIMutI CAGTG 3 cut(s) 492, 1999, 2058
BtuMI TCGCGA 1 cut(s) 1029
BveI ACCTGC 2 cut(s) 741, 1957
CaiI CAGNNNCTG 2 cut(s) 152, 202
CciI TCATGA 1 cut(s) 1081
CfoI GCGC 2 cut(s) 75, 556
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 4 cut(s) 16, 537, 1544, 1559
CseI GACGC 1 cut(s) 79
Csp6I GTAC 6 cut(s) 546, 840, 1111, 1997, 2087, 2155
CviAII CATG 7 cut(s) 1057, 1082, 1419, 1505, 1607, 2122, 2350
CviQI GTAC 6 cut(s) 546, 840, 1111, 1997, 2087, 2155
DinI GGCGCC 1 cut(s) 555
DpnI GATC 5 cut(s) 330, 705, 1191, 1227, 2022
DpnII GATC 5 cut(s) 328, 703, 1189, 1225, 2020
DraI TTTAAA 2 cut(s) 363, 1732
DraIII CACNNNGTG 1 cut(s) 2336
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 2232
EarI CTCTTC 1 cut(s) 2232
Ecl136II GAGCTC 1 cut(s) 2311
Eco24I GRGCYC 1 cut(s) 2313
Eco31I GGTCTC 3 cut(s) 362, 484, 1667
Eco47I GGWCC 2 cut(s) 16, 1544
Eco53kI GAGCTC 1 cut(s) 2311
Eco57I CTGAAG 3 cut(s) 1148, 1785, 2163
Eco81I CCTNAGG 2 cut(s) 474, 1919
Eco88I CYCGRG 1 cut(s) 311
Eco91I GGTNACC 1 cut(s) 2195
EcoICRI GAGCTC 1 cut(s) 2311
EcoNI CCTNNNNNAGG 1 cut(s) 1682
EcoO109I RGGNCCY 1 cut(s) 1559
EcoO65I GGTNACC 1 cut(s) 2195
EcoRI GAATTC 4 cut(s) 316, 986, 1003, 1020
EcoRII CCWGG 4 cut(s) 371, 539, 790, 1540
EcoT38I GRGCYC 1 cut(s) 2313
EgeI GGCGCC 1 cut(s) 555
EheI GGCGCC 1 cut(s) 555
Esp3I CGTCTC 3 cut(s) 85, 198, 2270
FaeI CATG 7 cut(s) 1060, 1085, 1422, 1508, 1610, 2125, 2353
FalI AAGNNNNNCTT 6 cut(s) 111, 143, 287, 319, 1920, 1952
FaqI GGGAC 2 cut(s) 1582, 1680
FatI CATG 7 cut(s) 1056, 1081, 1418, 1504, 1606, 2121, 2349
FauI CCCGC 1 cut(s) 115
FbaI TGATCA 1 cut(s) 703
Fnu4HI GCNGC 5 cut(s) 39, 600, 1509, 1974, 2411
FokI GGATG 9 cut(s) 612, 713, 782, 1491, 1611, 1649, 1867, 2078, 2374
FriOI GRGCYC 1 cut(s) 2313
Fsp4HI GCNGC 5 cut(s) 39, 600, 1509, 1974, 2411
FspBI CTAG 9 cut(s) 864, 915, 1008, 1455, 1670, 1778, 1869, 2148, 2358
GlaI GCGC 2 cut(s) 74, 555
GluI GCNGC 5 cut(s) 39, 600, 1509, 1974, 2411
GsaI CCCAGC 1 cut(s) 239
GsuI CTGGAG 3 cut(s) 266, 954, 2324
HaeII RGCGCY 1 cut(s) 557
HaeIII GGCC 5 cut(s) 38, 538, 1012, 1561, 1737
HapII CCGG 3 cut(s) 42, 110, 261
HgaI GACGC 1 cut(s) 79
HhaI GCGC 2 cut(s) 75, 556
Hin1I GRCGYC 1 cut(s) 554
Hin1II CATG 7 cut(s) 1060, 1085, 1422, 1508, 1610, 2125, 2353
Hin6I GCGC 2 cut(s) 73, 554
HinP1I GCGC 2 cut(s) 73, 554
HincII GTYRAC 2 cut(s) 276, 573
HindII GTYRAC 2 cut(s) 276, 573
HindIII AAGCTT 1 cut(s) 440
HpaI GTTAAC 1 cut(s) 573
HpaII CCGG 3 cut(s) 42, 110, 261
HphI GGTGA 9 cut(s) 20, 56, 79, 413, 530, 544, 1168, 1261, 2137
Hpy166II GTNNAC 5 cut(s) 276, 573, 1742, 1997, 2330
Hpy8I GTNNAC 5 cut(s) 276, 573, 1742, 1997, 2330
HpyCH4III ACNGT 7 cut(s) 518, 719, 962, 1451, 1697, 2086, 2111
HpyCH4IV ACGT 4 cut(s) 78, 391, 569, 1341
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 503, 910, 1389, 1599, 2174, 2375
HpySE526I ACGT 4 cut(s) 78, 391, 569, 1341
Hsp92I GRCGYC 1 cut(s) 554
Hsp92II CATG 7 cut(s) 1060, 1085, 1422, 1508, 1610, 2125, 2353
HspAI GCGC 2 cut(s) 73, 554
KasI GGCGCC 1 cut(s) 553
Ksp22I TGATCA 1 cut(s) 703
KspAI GTTAAC 1 cut(s) 573
Kzo9I GATC 5 cut(s) 328, 703, 1189, 1225, 2020
LmnI GCTCC 4 cut(s) 199, 1075, 1687, 2308
Lsp1109I GCAGC 4 cut(s) 586, 1495, 1960, 2422
LweI GCATC 6 cut(s) 634, 801, 1569, 1589, 1795, 2352
MaeI CTAG 9 cut(s) 864, 915, 1008, 1455, 1670, 1778, 1869, 2148, 2358
MaeII ACGT 4 cut(s) 78, 391, 569, 1341
MaeIII GTNAC 6 cut(s) 8, 44, 67, 1376, 1457, 2195
MalI GATC 5 cut(s) 330, 705, 1191, 1227, 2022
MboI GATC 5 cut(s) 328, 703, 1189, 1225, 2020
MfeI CAATTG 1 cut(s) 1229
MhlI GDGCHC 3 cut(s) 31, 731, 2313
Mly113I GGCGCC 1 cut(s) 554
MlyI GAGTC 1 cut(s) 652
MmeI TCCRAC 1 cut(s) 1456
MroXI GAANNNNTTC 2 cut(s) 832, 2254
MseI TTAA 6 cut(s) 129, 362, 572, 1536, 1632, 1731
MslI CAYNNNNRTG 2 cut(s) 1130, 1423
MspA1I CMGCKG 1 cut(s) 599
MspI CCGG 3 cut(s) 42, 110, 261
MspR9I CCNGG 5 cut(s) 110, 373, 541, 792, 1542
MunI CAATTG 1 cut(s) 1229
MvaI CCWGG 4 cut(s) 373, 541, 792, 1542
MvnI CGCG 2 cut(s) 73, 1029
MwoI GCNNNNNNNGC 7 cut(s) 35, 503, 910, 1389, 1599, 2174, 2375
NarI GGCGCC 1 cut(s) 554
NciI CCSGG 1 cut(s) 110
NdeII GATC 5 cut(s) 328, 703, 1189, 1225, 2020
NlaIII CATG 7 cut(s) 1060, 1085, 1422, 1508, 1610, 2125, 2353
NlaIV GGNNCC 3 cut(s) 555, 1502, 1560
NmuCI GTSAC 4 cut(s) 8, 44, 67, 1376
NruI TCGCGA 1 cut(s) 1029
PagI TCATGA 1 cut(s) 1081
PdmI GAANNNNTTC 2 cut(s) 832, 2254
PkrI GCNGC 5 cut(s) 40, 601, 1510, 1975, 2412
PleI GAGTC 1 cut(s) 652
PluTI GGCGCC 1 cut(s) 557
PpsI GAGTC 1 cut(s) 652
Psp124BI GAGCTC 1 cut(s) 2313
Psp6I CCWGG 4 cut(s) 371, 539, 790, 1540
PspEI GGTNACC 1 cut(s) 2195
PspFI CCCAGC 1 cut(s) 235
PspGI CCWGG 4 cut(s) 371, 539, 790, 1540
PspN4I GGNNCC 3 cut(s) 555, 1502, 1560
PspPI GGNCC 4 cut(s) 16, 537, 1544, 1559
PstNI CAGNNNCTG 2 cut(s) 152, 202
PvuII CAGCTG 1 cut(s) 599
RruI TCGCGA 1 cut(s) 1029
RsaI GTAC 6 cut(s) 547, 841, 1112, 1998, 2088, 2156
RsaNI GTAC 6 cut(s) 546, 840, 1111, 1997, 2087, 2155
RseI CAYNNNNRTG 2 cut(s) 1130, 1423
SacI GAGCTC 1 cut(s) 2313
SaqAI TTAA 6 cut(s) 129, 362, 572, 1536, 1632, 1731
SatI GCNGC 5 cut(s) 39, 600, 1509, 1974, 2411
Sau3AI GATC 5 cut(s) 328, 703, 1189, 1225, 2020
Sau96I GGNCC 4 cut(s) 16, 537, 1544, 1559
ScaI AGTACT 2 cut(s) 547, 1112
SchI GAGTC 1 cut(s) 652
ScrFI CCNGG 5 cut(s) 110, 373, 541, 792, 1542
SduI GDGCHC 3 cut(s) 31, 731, 2313
SfaNI GCATC 6 cut(s) 634, 801, 1569, 1589, 1795, 2352
SfoI GGCGCC 1 cut(s) 555
SgrAI CRCCGGYG 1 cut(s) 41
SinI GGWCC 2 cut(s) 16, 1544
SmiMI CAYNNNNRTG 2 cut(s) 1130, 1423
SmlI CTYRAG 3 cut(s) 443, 1114, 1175
SmoI CTYRAG 3 cut(s) 443, 1114, 1175
SsiI CCGC 6 cut(s) 19, 39, 122, 1247, 1288, 1515
SspDI GGCGCC 1 cut(s) 553
SspMI CTAG 9 cut(s) 864, 915, 1008, 1455, 1670, 1778, 1869, 2148, 2358
SstI GAGCTC 1 cut(s) 2313
StyD4I CCNGG 5 cut(s) 108, 371, 539, 790, 1540
TaaI ACNGT 7 cut(s) 518, 719, 962, 1451, 1697, 2086, 2111
TaiI ACGT 4 cut(s) 81, 394, 572, 1344
TaqI TCGA 6 cut(s) 661, 668, 681, 806, 826, 941
TatI WGTACW 3 cut(s) 545, 1110, 1996
TauI GCSGC 1 cut(s) 41
Tru1I TTAA 6 cut(s) 129, 362, 572, 1536, 1632, 1731
Tru9I TTAA 6 cut(s) 129, 362, 572, 1536, 1632, 1731
TscAI CASTG 3 cut(s) 499, 1999, 2065
TseFI GTSAC 4 cut(s) 8, 44, 67, 1376
TseI GCWGC 4 cut(s) 599, 1508, 1973, 2410
Tsp45I GTSAC 4 cut(s) 8, 44, 67, 1376
TspDTI ATGAA 4 cut(s) 734, 1070, 1407, 2366
TspGWI ACGGA 5 cut(s) 1589, 2015, 2063, 2194, 2294
TspRI CASTG 3 cut(s) 499, 1999, 2065
VpaK11BI GGWCC 2 cut(s) 16, 1544
XagI CCTNNNNNAGG 1 cut(s) 1682
XapI RAATTY 8 cut(s) 316, 664, 676, 708, 986, 1003, 1020, 1441
XcmI CCANNNNNNNNNTGG 1 cut(s) 547
XmnI GAANNNNTTC 2 cut(s) 832, 2254
XspI CTAG 9 cut(s) 864, 915, 1008, 1455, 1670, 1778, 1869, 2148, 2358
ZrmI AGTACT 2 cut(s) 547, 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.