FvH4_4g35330

UPF0392 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014925
Physical Location & Seq
Forward (+)
32664291 .. 32666051
1761 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g35330.t1

Sequence Viewer

Length: 1761 bp
ATGGACTCCGAGCAGCGCCGCAAGCGGAAGCGCCTGGGCCGCTCCTACTCTCTGCCGGCCAAGTGCTACTACTTGTCGCGGAGGTCTCTTCTTCTCTGCTTCTCTTTCTTCGTCTTCCTCCTCTTCTTGTCCTCCGGCCGCTTCAGAACGGCGTCGTTCCGCCCCGTCATCACCGCCTCCTCCACCACTCTCTCTCTCCTCTCCTCCACCGCGCACAACTCCGTTCTCGACTCGTTCGCTCACCGCAACGACGCGCCGCCGGTGAAGGTCCAAGATCGGGTCTTGTTTCCCGACCACGTCCTCCTCATCGCCGCCGGCCGGCTCGACGGAGAGCTGGACTGTGTTTACCGGAGATTCAACGGCTCCGATGAGGTTGCCTTCGCCGTCAAGCCGGTGCTGTCGACGGAGGCTTACGACGAGGCCCGGTCGATCGTGCGGTGTCCGCTGCCGTTCGGGAACTACTCCTCCGCCGTCGATTTGAGGCGGCGAGGCGGAAAACCCGACTGGACGGCGAGGATTAATTCGACGGTGGATGCTGCTTCTCCTTGGGATAAGGTCGTTTACGAGGCGGTTATTGATGACGACACGGCGGTTGTGTTTGTTAAGGGGCTGAATCTTAGACCGCACAGAAAGTCCGACCCGACCCGACTCACTTGCCATTTCGAGATTGGCGGAGGGTTTGAGCTTGCCACGCAAGCAGTTACGGCAGCTCAGGAAGTTGTGAGGTGTTTGTTGCCGAAGAGCATTAGCAACAACCCGGATAAGGCTTCGGGTATTCGGGTCACAATCGGGTACAACACTGGGCATCCTAGAGCTCCAATCCATGTGACTCTTCCTTCTGTGGCTACATTACATAGTCCAAAGCCCAGGTTAGTTAAGGAGAAGAAGCATGAGCTTTGTGCCTGCACTATGCTGTGGAACCAAGCCCCTGCGCTCAGTGAGTGGATCATGTACCATGCTTGGCTTGGAGTCGAGAGGTGGTTCATCTATGATAACAACAGTGATGATGGGATTGAGGAAGTTGTTTCGGACCTCGATTCGCAGGGGTACAATGTCACTAGGCAGTCCTGGCCATGGATCAAGACTCAGGAAGCAGGGTTTTCGCATTGTGCTTTGAAAGCGAGAGAGGAGTGTACTTGGGTTGGTTTCTTTGATGTGGATGAGTTCTTCTACTTCCCTAAGGAGTTCAGGAAACGTGGGAAGACTGGCATTCCTGGCGAAAACTCCCTTGGGAAGCTGGTTTCGAATTTTTCAAACTCGCCAACGTTTGCTGAGCTGAGGATTGATTGCCATAGTTTTGGTCCGTCTGGGTTGAGCTCACATCCATCACAGGGAGTGACTGCAGGGTACACTTGCCGGTTGCAAAGCCCCGAAAGGCACAAGTCCATTGTCCGAGCAGACTTGCTTGATGTTACATTGCTTAATGTGGTGCACCATTTCAGGCTTAGAGAGGGTTTTAGGCACCTGAATGTGCCGGAAGGCGTTGCAGTGATAAACCACTACAAGTATCAGGTTTGGGAGACTTTCAAGGCCAAGTTTTACAGAAGGGTTGCTACATATGTTGTAGATTGGCAGGAAGATCAAAACCAAGGGTCCAAGGACAGAGCGCCTGGGTTAGGAACAGAGGCCATTGAACCGCCGAATTGGAGGTTAAGATTCTGTGAGGTTTGGGACACTCGCCTTAAAGACTTTGTTTTGACTTACTTTGCTGATCCTTCAACTGGGTCACTGCCATGGGAGAGGAGGGCTCAACTTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

587

Amino Acids

66.51

Weight (kDa)

8.96

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 296 - 529 3e-37 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 307 - 394 2.4e-13 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27200
fragaria_vesca FvH4_4g35330
malus_domestica MD16G1083500.v1.1
prunus_persica Prupe.1G262500_v2.0.a1
pyrus_communis pycom13g07280 pycom16g07240
rosa_chinensis RchiOBHm_Chr4g0444941
rosa_laevigata RLG00000005785
rosa_multiflora Rmu_sc0011561.1_g000002 Rmu_sc0038487.1_g000001
rosa_roxburghii Rroxscaffold_5G00385430
rosa_rugosa Rorug04G0356500
rosa_samantha Rh4BG429800 Rh4CG444700 Rh4DG425900
rosa_wichuraiana Rw4G035840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1461
AccBSI CCGCTC 1 cut(s) 42
AccI GTMKAC 1 cut(s) 401
AccII CGCG 3 cut(s) 79, 212, 254
AclI AACGTT 1 cut(s) 1265
AclWI GGATC 3 cut(s) 953, 1085, 1706
AcoI YGGCCR 4 cut(s) 57, 136, 316, 1070
AcsI RAATTY 1 cut(s) 1246
AcuI CTGAAG 1 cut(s) 127
AcyI GRCGYC 1 cut(s) 152
AfaI GTAC 5 cut(s) 794, 953, 1049, 1135, 1349
AfiI CCNNNNNNNGG 7 cut(s) 277, 318, 763, 1074, 1331, 1616, 1721
AgsI TTSAA 6 cut(s) 358, 1117, 1254, 1528, 1634, 1719
AjiI CACGTC 1 cut(s) 298
AjnI CCWGG 5 cut(s) 33, 866, 1067, 1213, 1609
AjuI GAANNNNNNNTTGG 2 cut(s) 1212, 1244
AloI GAACNNNNNNTCC 2 cut(s) 449, 481
AluBI AGCT 8 cut(s) 334, 685, 710, 815, 895, 1237, 1276, 1317
AluI AGCT 8 cut(s) 334, 685, 710, 815, 895, 1237, 1276, 1317
Alw21I GWGCWC 3 cut(s) 817, 1319, 1434
Alw26I GTCTC 2 cut(s) 90, 1514
Alw44I GTGCAC 1 cut(s) 1430
AlwI GGATC 3 cut(s) 953, 1085, 1706
AoxI GGCC 8 cut(s) 37, 57, 136, 316, 420, 1070, 1530, 1626
ApaLI GTGCAC 1 cut(s) 1430
ApeKI GCWGC 4 cut(s) 13, 445, 536, 707
ApoI RAATTY 1 cut(s) 1246
AseI ATTAAT 1 cut(s) 519
AspLEI GCGC 6 cut(s) 18, 33, 214, 256, 934, 1609
AspS9I GGNCC 6 cut(s) 37, 268, 421, 1030, 1301, 1593
AsuC2I CCSGG 2 cut(s) 424, 758
AsuHPI GGTGA 3 cut(s) 163, 233, 274
AsuII TTCGAA 1 cut(s) 1244
AvaII GGWCC 4 cut(s) 268, 1030, 1301, 1593
AxyI CCTNAGG 1 cut(s) 1179
BaeGI GKGCMC 1 cut(s) 1434
BalI TGGCCA 1 cut(s) 1072
BanI GGYRCC 1 cut(s) 1461
BanII GRGCYC 3 cut(s) 817, 1319, 1750
BarI GAAGNNNNNNTAC 2 cut(s) 1537, 1569
BbsI GAAGAC 2 cut(s) 106, 1208
Bbv12I GWGCWC 3 cut(s) 817, 1319, 1434
BbvCI CCTCAGC 1 cut(s) 1277
BbvI GCAGC 4 cut(s) 25, 432, 523, 719
BccI CCATC 2 cut(s) 1001, 1333
BceAI ACGGC 8 cut(s) 165, 368, 376, 433, 455, 525, 603, 720
BcgI CGANNNNNNTGC 6 cut(s) 356, 390, 636, 670, 1083, 1117
BciT130I CCWGG 5 cut(s) 35, 868, 1069, 1215, 1611
BcnI CCSGG 2 cut(s) 424, 758
BcoDI GTCTC 2 cut(s) 90, 1514
BfaI CTAG 2 cut(s) 810, 1059
BfmI CTRYAG 1 cut(s) 1341
BfoI RGCGCY 3 cut(s) 19, 34, 1610
BlpI GCTNAGC 1 cut(s) 1272
Bme1390I CCNGG 7 cut(s) 35, 424, 758, 868, 1069, 1215, 1611
Bme18I GGWCC 4 cut(s) 268, 1030, 1301, 1593
BmgBI CACGTC 1 cut(s) 298
BmgT120I GGNCC 6 cut(s) 37, 268, 421, 1030, 1301, 1593
BmiI GGNNCC 4 cut(s) 364, 920, 1463, 1594
BmrFI CCNGG 7 cut(s) 35, 424, 758, 868, 1069, 1215, 1611
BmrI ACTGGG 2 cut(s) 810, 1731
BmsI GCATC 2 cut(s) 523, 814
BmuI ACTGGG 2 cut(s) 810, 1731
BpiI GAAGAC 2 cut(s) 106, 1208
BplI GAGNNNNNCTC 1 cut(s) 1732
Bpu10I CCTNAGC 2 cut(s) 711, 1277
Bpu1102I GCTNAGC 1 cut(s) 1272
Bpu14I TTCGAA 1 cut(s) 1244
BpuMI CCSGG 2 cut(s) 424, 758
BsaHI GRCGYC 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 90
BsaJI CCNNGG 9 cut(s) 34, 545, 866, 1073, 1228, 1588, 1596, 1610, 1733
BsaWI WCCGGW 1 cut(s) 348
BsaXI ACNNNNNCTCC 2 cut(s) 449, 479
Bsc4I CCNNNNNNNGG 7 cut(s) 277, 318, 763, 1074, 1331, 1616, 1721
Bse118I RCCGGY 6 cut(s) 55, 259, 314, 318, 391, 1356
Bse1I ACTGG 4 cut(s) 509, 805, 1210, 1726
Bse21I CCTNAGG 1 cut(s) 1179
Bse3DI GCAATG 1 cut(s) 1415
BseBI CCWGG 5 cut(s) 35, 868, 1069, 1215, 1611
BseDI CCNNGG 9 cut(s) 34, 545, 866, 1073, 1228, 1588, 1596, 1610, 1733
BseGI GGATG 4 cut(s) 538, 805, 1165, 1321
BseLI CCNNNNNNNGG 7 cut(s) 277, 318, 763, 1074, 1331, 1616, 1721
BseMI GCAATG 1 cut(s) 1415
BseMII CTCAG 5 cut(s) 725, 949, 1100, 1263, 1268
BseNI ACTGG 4 cut(s) 509, 805, 1210, 1726
BseRI GAGGAG 8 cut(s) 110, 169, 188, 193, 293, 454, 1142, 1756
BseSI GKGCMC 1 cut(s) 1434
BseX3I CGGCCG 2 cut(s) 136, 316
BseXI GCAGC 4 cut(s) 25, 432, 523, 719
BsgI GTGCAG 1 cut(s) 889
Bsh1236I CGCG 3 cut(s) 79, 212, 254
Bsh1285I CGRYCG 4 cut(s) 139, 319, 428, 432
BshFI GGCC 8 cut(s) 39, 59, 138, 318, 422, 1072, 1532, 1628
BshNI GGYRCC 1 cut(s) 1461
BsiEI CGRYCG 4 cut(s) 139, 319, 428, 432
BsiHKAI GWGCWC 3 cut(s) 817, 1319, 1434
BslFI GGGAC 1 cut(s) 1685
BslI CCNNNNNNNGG 7 cut(s) 277, 318, 763, 1074, 1331, 1616, 1721
BsmAI GTCTC 2 cut(s) 90, 1514
BsmFI GGGAC 1 cut(s) 1685
BsmI GAATGC 1 cut(s) 1209
BsnI GGCC 8 cut(s) 39, 59, 138, 318, 422, 1072, 1532, 1628
Bso31I GGTCTC 1 cut(s) 90
Bsp119I TTCGAA 1 cut(s) 1244
Bsp1286I GDGCHC 4 cut(s) 817, 1319, 1434, 1750
Bsp143I GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
Bsp1720I GCTNAGC 1 cut(s) 1272
Bsp19I CCATGG 2 cut(s) 1073, 1733
BspANI GGCC 8 cut(s) 39, 59, 138, 318, 422, 1072, 1532, 1628
BspCNI CTCAG 5 cut(s) 724, 948, 1099, 1264, 1269
BspFNI CGCG 3 cut(s) 79, 212, 254
BspLI GGNNCC 4 cut(s) 364, 920, 1463, 1594
BspMAI CTGCAG 1 cut(s) 1345
BspPI GGATC 3 cut(s) 953, 1085, 1706
BspQI GCTCTTC 1 cut(s) 734
BspT104I TTCGAA 1 cut(s) 1244
BspT107I GGYRCC 1 cut(s) 1461
BspTNI GGTCTC 1 cut(s) 90
BsrBI CCGCTC 1 cut(s) 42
BsrDI GCAATG 1 cut(s) 1415
BsrFI RCCGGY 6 cut(s) 55, 259, 314, 318, 391, 1356
BsrI ACTGG 4 cut(s) 509, 805, 1210, 1726
BssAI RCCGGY 6 cut(s) 55, 259, 314, 318, 391, 1356
BssECI CCNNGG 9 cut(s) 34, 545, 866, 1073, 1228, 1588, 1596, 1610, 1733
BssMI GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
BssNI GRCGYC 1 cut(s) 152
BssT1I CCWWGG 6 cut(s) 545, 1073, 1228, 1588, 1596, 1733
Bst2UI CCWGG 5 cut(s) 35, 868, 1069, 1215, 1611
Bst4CI ACNGT 3 cut(s) 341, 529, 1001
Bst6I CTCTTC 4 cut(s) 93, 128, 734, 837
BstACI GRCGYC 1 cut(s) 152
BstBI TTCGAA 1 cut(s) 1244
BstC8I GCNNGC 7 cut(s) 23, 57, 316, 320, 687, 696, 904
BstDEI CTNAG 8 cut(s) 617, 711, 935, 1086, 1179, 1272, 1277, 1445
BstDSI CCRYGG 2 cut(s) 1073, 1733
BstENI CCTNNNNNAGG 1 cut(s) 1614
BstF5I GGATG 4 cut(s) 538, 805, 1165, 1321
BstFNI CGCG 3 cut(s) 79, 212, 254
BstH2I RGCGCY 3 cut(s) 19, 34, 1610
BstHHI GCGC 6 cut(s) 18, 33, 214, 256, 934, 1609
BstKTI GATC 6 cut(s) 277, 432, 948, 1080, 1582, 1714
BstMAI GTCTC 2 cut(s) 90, 1514
BstMBI GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
BstMCI CGRYCG 4 cut(s) 139, 319, 428, 432
BstMWI GCNNNNNNNGC 9 cut(s) 22, 39, 442, 691, 695, 704, 1069, 1118, 1215
BstNI CCWGG 5 cut(s) 35, 868, 1069, 1215, 1611
BstSCI CCNGG 7 cut(s) 33, 422, 756, 866, 1067, 1213, 1609
BstSFI CTRYAG 1 cut(s) 1341
BstSLI GKGCMC 1 cut(s) 1434
BstUI CGCG 3 cut(s) 79, 212, 254
BstV1I GCAGC 4 cut(s) 25, 432, 523, 719
BstV2I GAAGAC 2 cut(s) 106, 1208
BstXI CCANNNNNNTGG 1 cut(s) 1298
BstZI CGGCCG 2 cut(s) 136, 316
Bsu36I CCTNAGG 1 cut(s) 1179
BsuRI GGCC 8 cut(s) 39, 59, 138, 318, 422, 1072, 1532, 1628
BtgI CCRYGG 2 cut(s) 1073, 1733
BtgZI GCGATG 1 cut(s) 292
BtrI CACGTC 1 cut(s) 298
BtsCI GGATG 4 cut(s) 538, 805, 1165, 1321
BtsI GCAGTG 2 cut(s) 1494, 1727
BtsIMutI CAGTG 5 cut(s) 798, 943, 1006, 1494, 1727
Cac8I GCNNGC 7 cut(s) 23, 57, 316, 320, 687, 696, 904
CfoI GCGC 6 cut(s) 18, 33, 214, 256, 934, 1609
Cfr10I RCCGGY 6 cut(s) 55, 259, 314, 318, 391, 1356
Cfr13I GGNCC 6 cut(s) 37, 268, 421, 1030, 1301, 1593
CseI GACGC 2 cut(s) 141, 260
Csp6I GTAC 5 cut(s) 793, 952, 1048, 1134, 1348
CviAII CATG 6 cut(s) 824, 890, 949, 956, 1074, 1734
CviQI GTAC 5 cut(s) 793, 952, 1048, 1134, 1348
DdeI CTNAG 8 cut(s) 617, 711, 935, 1086, 1179, 1272, 1277, 1445
DpnI GATC 6 cut(s) 276, 431, 947, 1079, 1581, 1713
DpnII GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
EaeI YGGCCR 4 cut(s) 57, 136, 316, 1070
EagI CGGCCG 2 cut(s) 136, 316
Eam1104I CTCTTC 4 cut(s) 93, 128, 734, 837
EarI CTCTTC 4 cut(s) 93, 128, 734, 837
EciI GGCGGA 4 cut(s) 149, 457, 507, 687
Ecl136II GAGCTC 2 cut(s) 815, 1317
EclXI CGGCCG 2 cut(s) 136, 316
Eco130I CCWWGG 6 cut(s) 545, 1073, 1228, 1588, 1596, 1733
Eco24I GRGCYC 3 cut(s) 817, 1319, 1750
Eco31I GGTCTC 1 cut(s) 90
Eco47I GGWCC 4 cut(s) 268, 1030, 1301, 1593
Eco52I CGGCCG 2 cut(s) 136, 316
Eco53kI GAGCTC 2 cut(s) 815, 1317
Eco57I CTGAAG 1 cut(s) 127
Eco81I CCTNAGG 1 cut(s) 1179
EcoICRI GAGCTC 2 cut(s) 815, 1317
EcoNI CCTNNNNNAGG 1 cut(s) 1614
EcoRII CCWGG 5 cut(s) 33, 866, 1067, 1213, 1609
EcoT14I CCWWGG 6 cut(s) 545, 1073, 1228, 1588, 1596, 1733
EcoT38I GRGCYC 3 cut(s) 817, 1319, 1750
ErhI CCWWGG 6 cut(s) 545, 1073, 1228, 1588, 1596, 1733
FaeI CATG 6 cut(s) 827, 893, 952, 959, 1077, 1737
FaqI GGGAC 1 cut(s) 1685
FatI CATG 6 cut(s) 823, 889, 948, 955, 1073, 1733
FauNDI CATATG 1 cut(s) 1558
FblI GTMKAC 1 cut(s) 401
FokI GGATG 4 cut(s) 545, 792, 1172, 1308
FriOI GRGCYC 3 cut(s) 817, 1319, 1750
FspBI CTAG 2 cut(s) 810, 1059
GlaI GCGC 6 cut(s) 17, 32, 213, 255, 933, 1608
HaeII RGCGCY 3 cut(s) 19, 34, 1610
HaeIII GGCC 8 cut(s) 39, 59, 138, 318, 422, 1072, 1532, 1628
HgaI GACGC 2 cut(s) 141, 260
HhaI GCGC 6 cut(s) 18, 33, 214, 256, 934, 1609
Hin1I GRCGYC 1 cut(s) 152
Hin1II CATG 6 cut(s) 827, 893, 952, 959, 1077, 1737
Hin6I GCGC 6 cut(s) 16, 31, 212, 254, 932, 1607
HinP1I GCGC 6 cut(s) 16, 31, 212, 254, 932, 1607
HincII GTYRAC 1 cut(s) 402
HindII GTYRAC 1 cut(s) 402
HphI GGTGA 3 cut(s) 163, 233, 274
Hpy166II GTNNAC 6 cut(s) 346, 402, 562, 1134, 1350, 1432
Hpy188I TCNGA 6 cut(s) 10, 146, 367, 637, 1030, 1394
Hpy188III TCNNGA 9 cut(s) 227, 290, 454, 664, 713, 973, 1081, 1088, 1189
Hpy8I GTNNAC 6 cut(s) 346, 402, 562, 1134, 1350, 1432
Hpy99I CGWCG 7 cut(s) 157, 254, 329, 406, 419, 476, 529
HpyAV CCTTC 6 cut(s) 259, 388, 846, 1472, 1539, 1725
HpyCH4III ACNGT 3 cut(s) 341, 529, 1001
HpyCH4IV ACGT 3 cut(s) 297, 1195, 1265
HpyCH4V TGCA 5 cut(s) 906, 1343, 1363, 1432, 1487
HpyF10VI GCNNNNNNNGC 9 cut(s) 22, 39, 442, 691, 695, 704, 1069, 1118, 1215
HpyF3I CTNAG 8 cut(s) 617, 711, 935, 1086, 1179, 1272, 1277, 1445
HpySE526I ACGT 3 cut(s) 297, 1195, 1265
Hsp92I GRCGYC 1 cut(s) 152
Hsp92II CATG 6 cut(s) 827, 893, 952, 959, 1077, 1737
HspAI GCGC 6 cut(s) 16, 31, 212, 254, 932, 1607
KroI GCCGGC 3 cut(s) 55, 314, 318
KroNI GCCGGC 3 cut(s) 57, 316, 320
Kzo9I GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
LguI GCTCTTC 1 cut(s) 734
LmnI GCTCC 3 cut(s) 47, 368, 820
Lsp1109I GCAGC 4 cut(s) 25, 432, 523, 719
LweI GCATC 2 cut(s) 523, 814
MaeI CTAG 2 cut(s) 810, 1059
MaeII ACGT 3 cut(s) 297, 1195, 1265
MaeIII GTNAC 7 cut(s) 700, 781, 826, 1054, 1336, 1411, 1725
MalI GATC 6 cut(s) 276, 431, 947, 1079, 1581, 1713
MbiI CCGCTC 1 cut(s) 42
MboI GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
MhlI GDGCHC 4 cut(s) 817, 1319, 1434, 1750
MlsI TGGCCA 1 cut(s) 1072
MluCI AATT 3 cut(s) 520, 1246, 1642
MluNI TGGCCA 1 cut(s) 1072
MlyI GAGTC 5 cut(s) 224, 642, 823, 978, 1078
MmeI TCCRAC 1 cut(s) 660
Mox20I TGGCCA 1 cut(s) 1072
MroNI GCCGGC 3 cut(s) 55, 314, 318
MscI TGGCCA 1 cut(s) 1072
MseI TTAA 6 cut(s) 519, 603, 876, 1422, 1652, 1683
MslI CAYNNNNRTG 2 cut(s) 1467, 1732
Msp20I TGGCCA 1 cut(s) 1072
MspA1I CMGCKG 1 cut(s) 445
MspR9I CCNGG 7 cut(s) 35, 424, 758, 868, 1069, 1215, 1611
Mva1269I GAATGC 1 cut(s) 1209
MvaI CCWGG 5 cut(s) 35, 868, 1069, 1215, 1611
MvnI CGCG 3 cut(s) 79, 212, 254
MwoI GCNNNNNNNGC 9 cut(s) 22, 39, 442, 691, 695, 704, 1069, 1118, 1215
NaeI GCCGGC 3 cut(s) 57, 316, 320
NciI CCSGG 2 cut(s) 424, 758
NcoI CCATGG 2 cut(s) 1073, 1733
NdeI CATATG 1 cut(s) 1558
NdeII GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
NgoMIV GCCGGC 3 cut(s) 55, 314, 318
NlaIII CATG 6 cut(s) 827, 893, 952, 959, 1077, 1737
NlaIV GGNNCC 4 cut(s) 364, 920, 1463, 1594
NmuCI GTSAC 5 cut(s) 781, 826, 1054, 1336, 1725
NspV TTCGAA 1 cut(s) 1244
PciSI GCTCTTC 1 cut(s) 734
PctI GAATGC 1 cut(s) 1209
PdiI GCCGGC 3 cut(s) 57, 316, 320
PfeI GAWTC 4 cut(s) 354, 613, 1037, 1656
PflFI GACNNNGTC 1 cut(s) 296
Ple19I CGATCG 1 cut(s) 432
PleI GAGTC 5 cut(s) 224, 642, 823, 977, 1078
PpsI GAGTC 5 cut(s) 224, 642, 823, 977, 1078
PshBI ATTAAT 1 cut(s) 519
Psp124BI GAGCTC 2 cut(s) 817, 1319
Psp1406I AACGTT 1 cut(s) 1265
Psp6I CCWGG 5 cut(s) 33, 866, 1067, 1213, 1609
PspGI CCWGG 5 cut(s) 33, 866, 1067, 1213, 1609
PspN4I GGNNCC 4 cut(s) 364, 920, 1463, 1594
PspPI GGNCC 6 cut(s) 37, 268, 421, 1030, 1301, 1593
PstI CTGCAG 1 cut(s) 1345
PsyI GACNNNGTC 1 cut(s) 296
PvuI CGATCG 1 cut(s) 432
RsaI GTAC 5 cut(s) 794, 953, 1049, 1135, 1349
RsaNI GTAC 5 cut(s) 793, 952, 1048, 1134, 1348
RseI CAYNNNNRTG 2 cut(s) 1467, 1732
SacI GAGCTC 2 cut(s) 817, 1319
SalI GTCGAC 1 cut(s) 400
SapI GCTCTTC 1 cut(s) 734
SaqAI TTAA 6 cut(s) 519, 603, 876, 1422, 1652, 1683
Sau3AI GATC 6 cut(s) 274, 429, 945, 1077, 1579, 1711
Sau96I GGNCC 6 cut(s) 37, 268, 421, 1030, 1301, 1593
SchI GAGTC 5 cut(s) 224, 642, 823, 978, 1078
ScrFI CCNGG 7 cut(s) 35, 424, 758, 868, 1069, 1215, 1611
SduI GDGCHC 4 cut(s) 817, 1319, 1434, 1750
SfaNI GCATC 2 cut(s) 523, 814
SfcI CTRYAG 1 cut(s) 1341
SfuI TTCGAA 1 cut(s) 1244
SgrAI CRCCGGYG 1 cut(s) 259
SinI GGWCC 4 cut(s) 268, 1030, 1301, 1593
SmiMI CAYNNNNRTG 2 cut(s) 1467, 1732
Sse9I AATT 3 cut(s) 520, 1246, 1642
SspMI CTAG 2 cut(s) 810, 1059
SstI GAGCTC 2 cut(s) 817, 1319
StyD4I CCNGG 7 cut(s) 33, 422, 756, 866, 1067, 1213, 1609
StyI CCWWGG 6 cut(s) 545, 1073, 1228, 1588, 1596, 1733
TaaI ACNGT 3 cut(s) 341, 529, 1001
TaiI ACGT 3 cut(s) 300, 1198, 1268
TasI AATT 3 cut(s) 520, 1246, 1642
TatI WGTACW 1 cut(s) 1133
TauI GCSGC 6 cut(s) 21, 42, 141, 259, 314, 487
TfiI GAWTC 4 cut(s) 354, 613, 1037, 1656
Tru1I TTAA 6 cut(s) 519, 603, 876, 1422, 1652, 1683
Tru9I TTAA 6 cut(s) 519, 603, 876, 1422, 1652, 1683
TscAI CASTG 5 cut(s) 805, 943, 1006, 1494, 1734
TseFI GTSAC 5 cut(s) 781, 826, 1054, 1336, 1725
TseI GCWGC 4 cut(s) 13, 445, 536, 707
Tsp45I GTSAC 5 cut(s) 781, 826, 1054, 1336, 1725
TspDTI ATGAA 1 cut(s) 973
TspGWI ACGGA 4 cut(s) 211, 342, 419, 1293
TspRI CASTG 5 cut(s) 805, 943, 1006, 1494, 1734
Tth111I GACNNNGTC 1 cut(s) 296
VneI GTGCAC 1 cut(s) 1430
VpaK11BI GGWCC 4 cut(s) 268, 1030, 1301, 1593
VspI ATTAAT 1 cut(s) 519
XagI CCTNNNNNAGG 1 cut(s) 1614
XapI RAATTY 1 cut(s) 1246
XcmI CCANNNNNNNNNTGG 2 cut(s) 665, 962
XmiI GTMKAC 1 cut(s) 401
XspI CTAG 2 cut(s) 810, 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.