Rh4CG444700

UPF0392 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0014925
Physical Location & Seq
Forward (+)
68039565 .. 68041334
1770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG444700.1

Sequence Viewer

Length: 1770 bp
ATGGATTCCGAGCAGCGCCGCAAGCGGAAGAGAATGGGGCGGTCCTACTCTGAGGCCAAGCACTACTTGTCGTCGCGGAGGTCTCTCTTTCTCTGCTTCTCCTTCTTCGTCTTCCTTCTTCTCTTGTCCTCCGGCCGCTTCAGAACGGCGTCGTTTCGGCCAGTCATCACCGCCTCCTCCACCACTCTCTATCTCATCTCCTCCACTGCCCACAACTCGGTTCTTGACTCGGTTGCTCACCGGAACGACTCGCCGCCGGCGAAGGTCCAAGATCGGGTCTTGTTTCCCGATCACGTGCTGCTCATCGCGGCCAACCGGTTTCAGCCGCAGGATGAGTTGGATTGCGTTTACCGGAGATTTAACGGCTCCGATGAGGTCGCTTTCGCCGTTAAGCCGGTGCTGTCGACGGAGGCTTACGATGAGGTCCGGTCAATCGTGCGATGTCCGCTGCCGTTCGGGAACTACTCGTCGGCCGTCGATTTGAGGAGGCGCGGCGGCAAACATGATTGGACGGCGAGGATTAACTCGACGGCTGCGGCGGCTTCTCCTTGGGATAAGGTGGTTTACGAGGCGGTTATTGATGACGACACGGCGGTTGTGTTCGTTAAGGGGTTGAATCTTAAACCGCACAGAAAGTCCGACCCGACCCGACTCACCTGCCATTTCGAGATGGGCGAAGGGTTTGAGTTCACTACCGAAGCCGTTACGGCAGCGCAGGAAGTTGTGAGGTGTTTGTTGCCAGAGAGCATTAGCAACGACCCGGATAAGGCTTCGGGTATTCGGGTCACTATTGGGTTCAACACTGGGCGTCCGAGAGCTCCAGTCCATGTGACTCTTCCTTCTGTGGCCACAATCCACAATTCAAAGCCCAATTTGGATGAGGCCACTAAGAAGAAGAAGCATGAGCTTTGTGTTTGCACTATGTTGTGGAACCAAGCCCCTGCGCTCAGTGAGTGGATCATGTACCATGCTTGGCTTGGAGTCGAGCGGTGGTTCATTTACGACAACAATAGTGATGATGGGATTGAAGATGTGGTTTTGGACCTCGATTCGCAGGGCTACAATGTCAGTAGGCAGTCCTGGCCATGGATCAAGACTCAGGAAGCAGGGTTTTCGCATTGTGCTTTGAAAGCGAGAGAGGAATGTACTTGGGTTGGTTTCTTTGATGTGGATGAATTCTTCTACTTCCCTAGGGAGTTCAGGAGACGTAGAAGAGATGGCGTTCCTGGCGAAAACTGGCTCGGGAAGCTGGTTTCGAATTTTTCAAACTCTCCGACGATTGCAGAGCTGAGAACTGATTGCCATAGTTTTGGTCCGTCCGGGTTGAGATCACATCCATCACGGGGAGTGACCACAGGGTACACTTGCCGGTTGCAAAGTCCCGAAAGGCACAAGTCAATTGTCCGAACAGATTTGCTTGATGTTACATTGCTCAATGTGGTGCACCATTTCAGGCTGAGAGAGGGTTTTAGGCACCTGAACGTGCCGGAAGGCATTGCGGTGATAAACCACTACAAGTACCAGGTTTGGGAGACCTTCAGGGCCAAGTTTTACAGAAGGGTTGCTACATATGTTGTGGATTGGCAGGAAGATCAAAACCAGGGGTCGAAGGATAGAGCACCTGGGTTAGGAACAGAGGCCATTGAACCGCCAAATTGGAGGTTAAGATTCTGTGAGGTTTGGGACACTGGCCTTAAAGACTTTGTTTTGGCTTACTTTGCTGATCGTTCGACTGGGTCACTGCCATGGGAGAGGGCTCAACATCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

589

Amino Acids

67.44

Weight (kDa)

8.61

Isoelectric Point (pI)

52.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 300 - 533 2.6e-36 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 311 - 398 1.1e-12 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27200
fragaria_vesca FvH4_4g35330
malus_domestica MD16G1083500.v1.1
prunus_persica Prupe.1G262500_v2.0.a1
pyrus_communis pycom13g07280 pycom16g07240
rosa_chinensis RchiOBHm_Chr4g0444941
rosa_laevigata RLG00000005785
rosa_multiflora Rmu_sc0011561.1_g000002 Rmu_sc0038487.1_g000001
rosa_roxburghii Rroxscaffold_5G00385430
rosa_rugosa Rorug04G0356500
rosa_samantha Rh4BG429800 Rh4CG444700 Rh4DG425900
rosa_wichuraiana Rw4G035840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 665
Acc36I ACCTGC 1 cut(s) 665
AccB1I GGYRCC 1 cut(s) 1473
AccBSI CCGCTC 1 cut(s) 988
AccI GTMKAC 1 cut(s) 404
AccII CGCG 3 cut(s) 76, 308, 492
AclWI GGATC 2 cut(s) 965, 1097
AcoI YGGCCR 6 cut(s) 133, 158, 309, 471, 846, 1082
AcsI RAATTY 2 cut(s) 1175, 1258
AcuI CTGAAG 2 cut(s) 124, 1522
AcvI CACGTG 1 cut(s) 295
AcyI GRCGYC 2 cut(s) 149, 808
AfaI GTAC 4 cut(s) 965, 1147, 1361, 1520
AfiI CCNNNNNNNGG 7 cut(s) 217, 274, 766, 1086, 1343, 1528, 1628
AgeI ACCGGT 1 cut(s) 315
AgsI TTSAA 7 cut(s) 616, 799, 864, 1028, 1129, 1266, 1646
AjnI CCWGG 5 cut(s) 1079, 1225, 1521, 1599, 1621
AluBI AGCT 4 cut(s) 818, 907, 1249, 1288
AluI AGCT 4 cut(s) 818, 907, 1249, 1288
Alw21I GWGCWC 3 cut(s) 820, 1446, 1621
Alw26I GTCTC 3 cut(s) 87, 1198, 1526
Alw44I GTGCAC 1 cut(s) 1442
AlwI GGATC 2 cut(s) 965, 1097
Ama87I CYCGRG 1 cut(s) 1241
ApaLI GTGCAC 1 cut(s) 1442
ApeKI GCWGC 5 cut(s) 13, 298, 448, 533, 710
ApoI RAATTY 2 cut(s) 1175, 1258
AsiGI ACCGGT 1 cut(s) 315
AspA2I CCTAGG 1 cut(s) 1190
AspLEI GCGC 4 cut(s) 18, 492, 715, 946
AspS9I GGNCC 6 cut(s) 42, 265, 424, 1042, 1313, 1542
AsuC2I CCSGG 2 cut(s) 761, 1321
AsuHPI GGTGA 4 cut(s) 160, 230, 646, 1513
AsuII TTCGAA 1 cut(s) 1256
AvaI CYCGRG 1 cut(s) 1241
AvaII GGWCC 5 cut(s) 42, 265, 424, 1042, 1313
AvrII CCTAGG 1 cut(s) 1190
BaeGI GKGCMC 1 cut(s) 1446
BalI TGGCCA 2 cut(s) 848, 1084
BanI GGYRCC 1 cut(s) 1473
BanII GRGCYC 2 cut(s) 820, 1759
BarI GAAGNNNNNNTAC 2 cut(s) 1549, 1581
BbrPI CACGTG 1 cut(s) 295
BbsI GAAGAC 1 cut(s) 103
Bbv12I GWGCWC 3 cut(s) 820, 1446, 1621
BbvI GCAGC 5 cut(s) 25, 285, 435, 520, 722
BccI CCATC 4 cut(s) 664, 1013, 1211, 1345
BcgI CGANNNNNNTGC 4 cut(s) 639, 673, 1095, 1129
BciT130I CCWGG 5 cut(s) 1081, 1227, 1523, 1601, 1623
BcnI CCSGG 2 cut(s) 761, 1321
BcoDI GTCTC 3 cut(s) 87, 1198, 1526
BfaI CTAG 1 cut(s) 1191
BfoI RGCGCY 1 cut(s) 19
BfuAI ACCTGC 1 cut(s) 665
BglI GCCNNNNNGGC 1 cut(s) 707
BlnI CCTAGG 1 cut(s) 1190
Bme1390I CCNGG 7 cut(s) 761, 1081, 1227, 1321, 1523, 1601, 1623
Bme18I GGWCC 5 cut(s) 42, 265, 424, 1042, 1313
BmeT110I CYCGRG 1 cut(s) 1241
BmgT120I GGNCC 6 cut(s) 42, 265, 424, 1042, 1313, 1542
BmiI GGNNCC 3 cut(s) 367, 932, 1475
BmrFI CCNGG 7 cut(s) 761, 1081, 1227, 1321, 1523, 1601, 1623
BmrI ACTGGG 2 cut(s) 813, 1743
BmuI ACTGGG 2 cut(s) 813, 1743
BpiI GAAGAC 1 cut(s) 103
BpmI CTGGAG 1 cut(s) 804
Bpu14I TTCGAA 1 cut(s) 1256
BpuMI CCSGG 2 cut(s) 761, 1321
BsaAI YACGTR 1 cut(s) 295
BsaHI GRCGYC 2 cut(s) 149, 808
BsaI GGTCTC 2 cut(s) 87, 1526
BsaJI CCNNGG 6 cut(s) 548, 1085, 1190, 1600, 1622, 1745
BsaWI WCCGGW 4 cut(s) 240, 315, 351, 426
Bsc4I CCNNNNNNNGG 7 cut(s) 217, 274, 766, 1086, 1343, 1528, 1628
Bse118I RCCGGY 4 cut(s) 256, 315, 394, 1368
Bse1I ACTGG 6 cut(s) 161, 808, 821, 1241, 1693, 1738
Bse3DI GCAATG 2 cut(s) 1427, 1494
BseBI CCWGG 5 cut(s) 1081, 1227, 1523, 1601, 1623
BseDI CCNNGG 6 cut(s) 548, 1085, 1190, 1600, 1622, 1745
BseGI GGATG 4 cut(s) 337, 883, 1177, 1333
BseLI CCNNNNNNNGG 7 cut(s) 217, 274, 766, 1086, 1343, 1528, 1628
BseMI GCAATG 2 cut(s) 1427, 1494
BseMII CTCAG 5 cut(s) 42, 961, 1112, 1280, 1448
BseNI ACTGG 6 cut(s) 161, 808, 821, 1241, 1693, 1738
BseRI GAGGAG 3 cut(s) 166, 190, 499
BseSI GKGCMC 1 cut(s) 1446
BseX3I CGGCCG 2 cut(s) 133, 471
BseXI GCAGC 5 cut(s) 25, 285, 435, 520, 722
Bsh1236I CGCG 3 cut(s) 76, 308, 492
Bsh1285I CGRYCG 2 cut(s) 136, 474
BshNI GGYRCC 1 cut(s) 1473
BshTI ACCGGT 1 cut(s) 315
BsiEI CGRYCG 2 cut(s) 136, 474
BsiHKAI GWGCWC 3 cut(s) 820, 1446, 1621
BsiHKCI CYCGRG 1 cut(s) 1241
BslFI GGGAC 2 cut(s) 1365, 1697
BslI CCNNNNNNNGG 7 cut(s) 217, 274, 766, 1086, 1343, 1528, 1628
BsmAI GTCTC 3 cut(s) 87, 1198, 1526
BsmBI CGTCTC 1 cut(s) 1198
BsmFI GGGAC 2 cut(s) 1365, 1697
Bso31I GGTCTC 2 cut(s) 87, 1526
BsoBI CYCGRG 1 cut(s) 1241
Bsp119I TTCGAA 1 cut(s) 1256
Bsp1286I GDGCHC 4 cut(s) 820, 1446, 1621, 1759
Bsp143I GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
Bsp19I CCATGG 2 cut(s) 1085, 1745
BspCNI CTCAG 5 cut(s) 43, 960, 1111, 1281, 1449
BspFNI CGCG 3 cut(s) 76, 308, 492
BspLI GGNNCC 3 cut(s) 367, 932, 1475
BspMI ACCTGC 1 cut(s) 665
BspPI GGATC 2 cut(s) 965, 1097
BspT104I TTCGAA 1 cut(s) 1256
BspT107I GGYRCC 1 cut(s) 1473
BspTNI GGTCTC 2 cut(s) 87, 1526
BsrBI CCGCTC 1 cut(s) 988
BsrDI GCAATG 2 cut(s) 1427, 1494
BsrFI RCCGGY 4 cut(s) 256, 315, 394, 1368
BsrI ACTGG 6 cut(s) 161, 808, 821, 1241, 1693, 1738
BssAI RCCGGY 4 cut(s) 256, 315, 394, 1368
BssECI CCNNGG 6 cut(s) 548, 1085, 1190, 1600, 1622, 1745
BssMI GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
BssNI GRCGYC 2 cut(s) 149, 808
BssT1I CCWWGG 4 cut(s) 548, 1085, 1190, 1745
Bst2UI CCWGG 5 cut(s) 1081, 1227, 1523, 1601, 1623
Bst6I CTCTTC 3 cut(s) 23, 840, 1207
BstACI GRCGYC 2 cut(s) 149, 808
BstBAI YACGTR 1 cut(s) 295
BstBI TTCGAA 1 cut(s) 1256
BstC8I GCNNGC 2 cut(s) 23, 258
BstDEI CTNAG 6 cut(s) 51, 888, 947, 1098, 1289, 1457
BstDSI CCRYGG 2 cut(s) 1085, 1745
BstENI CCTNNNNNAGG 1 cut(s) 1626
BstF5I GGATG 4 cut(s) 337, 883, 1177, 1333
BstFNI CGCG 3 cut(s) 76, 308, 492
BstH2I RGCGCY 1 cut(s) 19
BstHHI GCGC 4 cut(s) 18, 492, 715, 946
BstKTI GATC 7 cut(s) 274, 292, 960, 1092, 1331, 1594, 1726
BstMAI GTCTC 3 cut(s) 87, 1198, 1526
BstMBI GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
BstMCI CGRYCG 2 cut(s) 136, 474
BstMWI GCNNNNNNNGC 9 cut(s) 22, 445, 539, 707, 1081, 1130, 1227, 1246, 1718
BstNI CCWGG 5 cut(s) 1081, 1227, 1523, 1601, 1623
BstSCI CCNGG 7 cut(s) 759, 1079, 1225, 1319, 1521, 1599, 1621
BstSLI GKGCMC 1 cut(s) 1446
BstUI CGCG 3 cut(s) 76, 308, 492
BstV1I GCAGC 5 cut(s) 25, 285, 435, 520, 722
BstV2I GAAGAC 1 cut(s) 103
BstXI CCANNNNNNTGG 1 cut(s) 1310
BstZI CGGCCG 2 cut(s) 133, 471
BtgI CCRYGG 2 cut(s) 1085, 1745
BtgZI GCGATG 2 cut(s) 289, 454
BtsCI GGATG 4 cut(s) 337, 883, 1177, 1333
BtsI GCAGTG 2 cut(s) 204, 1739
BtsIMutI CAGTG 5 cut(s) 204, 801, 955, 1686, 1739
BveI ACCTGC 1 cut(s) 665
Cac8I GCNNGC 2 cut(s) 23, 258
CfoI GCGC 4 cut(s) 18, 492, 715, 946
Cfr10I RCCGGY 4 cut(s) 256, 315, 394, 1368
Cfr13I GGNCC 6 cut(s) 42, 265, 424, 1042, 1313, 1542
CseI GACGC 2 cut(s) 138, 797
CsiI ACCWGGT 1 cut(s) 1521
Csp6I GTAC 4 cut(s) 964, 1146, 1360, 1519
CspAI ACCGGT 1 cut(s) 315
CviAII CATG 7 cut(s) 503, 827, 902, 961, 968, 1086, 1746
CviQI GTAC 4 cut(s) 964, 1146, 1360, 1519
DdeI CTNAG 6 cut(s) 51, 888, 947, 1098, 1289, 1457
DpnI GATC 7 cut(s) 273, 291, 959, 1091, 1330, 1593, 1725
DpnII GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
EaeI YGGCCR 6 cut(s) 133, 158, 309, 471, 846, 1082
EagI CGGCCG 2 cut(s) 133, 471
Eam1104I CTCTTC 3 cut(s) 23, 840, 1207
EarI CTCTTC 3 cut(s) 23, 840, 1207
Ecl136II GAGCTC 1 cut(s) 818
EclXI CGGCCG 2 cut(s) 133, 471
Eco130I CCWWGG 4 cut(s) 548, 1085, 1190, 1745
Eco24I GRGCYC 2 cut(s) 820, 1759
Eco31I GGTCTC 2 cut(s) 87, 1526
Eco47I GGWCC 5 cut(s) 42, 265, 424, 1042, 1313
Eco52I CGGCCG 2 cut(s) 133, 471
Eco53kI GAGCTC 1 cut(s) 818
Eco57I CTGAAG 2 cut(s) 124, 1522
Eco72I CACGTG 1 cut(s) 295
Eco88I CYCGRG 1 cut(s) 1241
EcoICRI GAGCTC 1 cut(s) 818
EcoNI CCTNNNNNAGG 1 cut(s) 1626
EcoRI GAATTC 1 cut(s) 1175
EcoRII CCWGG 5 cut(s) 1079, 1225, 1521, 1599, 1621
EcoT14I CCWWGG 4 cut(s) 548, 1085, 1190, 1745
EcoT38I GRGCYC 2 cut(s) 820, 1759
ErhI CCWWGG 4 cut(s) 548, 1085, 1190, 1745
Esp3I CGTCTC 1 cut(s) 1198
FaeI CATG 7 cut(s) 506, 830, 905, 964, 971, 1089, 1749
FalI AAGNNNNNCTT 2 cut(s) 50, 82
FaqI GGGAC 2 cut(s) 1365, 1697
FatI CATG 7 cut(s) 502, 826, 901, 960, 967, 1085, 1745
FauNDI CATATG 1 cut(s) 1570
FblI GTMKAC 1 cut(s) 404
FokI GGATG 4 cut(s) 344, 890, 1184, 1320
FriOI GRGCYC 2 cut(s) 820, 1759
FspBI CTAG 1 cut(s) 1191
GlaI GCGC 4 cut(s) 17, 491, 714, 945
GsuI CTGGAG 1 cut(s) 804
HaeII RGCGCY 1 cut(s) 19
HgaI GACGC 2 cut(s) 138, 797
HhaI GCGC 4 cut(s) 18, 492, 715, 946
Hin1I GRCGYC 2 cut(s) 149, 808
Hin1II CATG 7 cut(s) 506, 830, 905, 964, 971, 1089, 1749
Hin6I GCGC 4 cut(s) 16, 490, 713, 944
HinP1I GCGC 4 cut(s) 16, 490, 713, 944
HincII GTYRAC 1 cut(s) 405
HindII GTYRAC 1 cut(s) 405
HphI GGTGA 4 cut(s) 160, 230, 646, 1513
Hpy166II GTNNAC 6 cut(s) 349, 405, 565, 690, 1362, 1444
Hpy188I TCNGA 8 cut(s) 10, 52, 143, 370, 640, 813, 1275, 1406
Hpy188III TCNNGA 9 cut(s) 224, 287, 457, 667, 1093, 1100, 1201, 1243, 1382
Hpy8I GTNNAC 6 cut(s) 349, 405, 565, 690, 1362, 1444
Hpy99I CGWCG 7 cut(s) 76, 154, 409, 472, 479, 532, 1279
HpyAV CCTTC 9 cut(s) 112, 125, 256, 671, 849, 1484, 1546, 1551, 1603
HpyCH4IV ACGT 3 cut(s) 294, 1207, 1482
HpyCH4V TGCA 4 cut(s) 918, 1283, 1375, 1444
HpyF10VI GCNNNNNNNGC 9 cut(s) 22, 445, 539, 707, 1081, 1130, 1227, 1246, 1718
HpyF3I CTNAG 6 cut(s) 51, 888, 947, 1098, 1289, 1457
HpySE526I ACGT 3 cut(s) 294, 1207, 1482
Hsp92I GRCGYC 2 cut(s) 149, 808
Hsp92II CATG 7 cut(s) 506, 830, 905, 964, 971, 1089, 1749
HspAI GCGC 4 cut(s) 16, 490, 713, 944
KroI GCCGGC 1 cut(s) 256
KroNI GCCGGC 1 cut(s) 258
Kzo9I GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
LmnI GCTCC 2 cut(s) 371, 823
Lsp1109I GCAGC 5 cut(s) 25, 285, 435, 520, 722
MabI ACCWGGT 1 cut(s) 1521
MaeI CTAG 1 cut(s) 1191
MaeII ACGT 3 cut(s) 294, 1207, 1482
MaeIII GTNAC 6 cut(s) 703, 784, 829, 1348, 1423, 1737
MalI GATC 7 cut(s) 273, 291, 959, 1091, 1330, 1593, 1725
MbiI CCGCTC 1 cut(s) 988
MboI GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
MfeI CAATTG 1 cut(s) 1398
MhlI GDGCHC 4 cut(s) 820, 1446, 1621, 1759
MlsI TGGCCA 2 cut(s) 848, 1084
MluCI AATT 6 cut(s) 859, 871, 1175, 1258, 1398, 1654
MluNI TGGCCA 2 cut(s) 848, 1084
MlyI GAGTC 6 cut(s) 221, 242, 645, 826, 990, 1090
MmeI TCCRAC 3 cut(s) 318, 663, 1298
Mox20I TGGCCA 2 cut(s) 848, 1084
MreI CGCCGGCG 1 cut(s) 256
MroNI GCCGGC 1 cut(s) 256
MscI TGGCCA 2 cut(s) 848, 1084
MseI TTAA 7 cut(s) 360, 390, 522, 606, 621, 1664, 1695
MslI CAYNNNNRTG 2 cut(s) 1499, 1744
Msp20I TGGCCA 2 cut(s) 848, 1084
MspA1I CMGCKG 1 cut(s) 448
MspR9I CCNGG 7 cut(s) 761, 1081, 1227, 1321, 1523, 1601, 1623
MunI CAATTG 1 cut(s) 1398
MvaI CCWGG 5 cut(s) 1081, 1227, 1523, 1601, 1623
MvnI CGCG 3 cut(s) 76, 308, 492
MwoI GCNNNNNNNGC 9 cut(s) 22, 445, 539, 707, 1081, 1130, 1227, 1246, 1718
NaeI GCCGGC 1 cut(s) 258
NciI CCSGG 2 cut(s) 761, 1321
NcoI CCATGG 2 cut(s) 1085, 1745
NdeI CATATG 1 cut(s) 1570
NdeII GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
NgoMIV GCCGGC 1 cut(s) 256
NlaIII CATG 7 cut(s) 506, 830, 905, 964, 971, 1089, 1749
NlaIV GGNNCC 3 cut(s) 367, 932, 1475
NmuCI GTSAC 4 cut(s) 784, 829, 1348, 1737
NspV TTCGAA 1 cut(s) 1256
PaqCI CACCTGC 1 cut(s) 665
PcsI WCGNNNNNNNCGW 3 cut(s) 257, 384, 672
PdiI GCCGGC 1 cut(s) 258
PfeI GAWTC 4 cut(s) 5, 616, 1049, 1668
PflFI GACNNNGTC 1 cut(s) 1735
PinAI ACCGGT 1 cut(s) 315
PleI GAGTC 6 cut(s) 221, 242, 645, 826, 989, 1090
PmaCI CACGTG 1 cut(s) 295
PmlI CACGTG 1 cut(s) 295
PpsI GAGTC 6 cut(s) 221, 242, 645, 826, 989, 1090
Ppu21I YACGTR 1 cut(s) 295
Psp124BI GAGCTC 1 cut(s) 820
Psp6I CCWGG 5 cut(s) 1079, 1225, 1521, 1599, 1621
PspCI CACGTG 1 cut(s) 295
PspGI CCWGG 5 cut(s) 1079, 1225, 1521, 1599, 1621
PspN4I GGNNCC 3 cut(s) 367, 932, 1475
PspPI GGNCC 6 cut(s) 42, 265, 424, 1042, 1313, 1542
PsyI GACNNNGTC 1 cut(s) 1735
RsaI GTAC 4 cut(s) 965, 1147, 1361, 1520
RsaNI GTAC 4 cut(s) 964, 1146, 1360, 1519
RseI CAYNNNNRTG 2 cut(s) 1499, 1744
SacI GAGCTC 1 cut(s) 820
SalI GTCGAC 1 cut(s) 403
SaqAI TTAA 7 cut(s) 360, 390, 522, 606, 621, 1664, 1695
Sau3AI GATC 7 cut(s) 271, 289, 957, 1089, 1328, 1591, 1723
Sau96I GGNCC 6 cut(s) 42, 265, 424, 1042, 1313, 1542
SchI GAGTC 6 cut(s) 221, 242, 645, 826, 990, 1090
ScrFI CCNGG 7 cut(s) 761, 1081, 1227, 1321, 1523, 1601, 1623
SduI GDGCHC 4 cut(s) 820, 1446, 1621, 1759
SexAI ACCWGGT 1 cut(s) 1521
SfuI TTCGAA 1 cut(s) 1256
SgrAI CRCCGGYG 1 cut(s) 256
SinI GGWCC 5 cut(s) 42, 265, 424, 1042, 1313
SmiMI CAYNNNNRTG 2 cut(s) 1499, 1744
Sse9I AATT 6 cut(s) 859, 871, 1175, 1258, 1398, 1654
SspMI CTAG 1 cut(s) 1191
SstI GAGCTC 1 cut(s) 820
StyD4I CCNGG 7 cut(s) 759, 1079, 1225, 1319, 1521, 1599, 1621
StyI CCWWGG 4 cut(s) 548, 1085, 1190, 1745
TaiI ACGT 3 cut(s) 297, 1210, 1485
TaqI TCGA 9 cut(s) 404, 477, 527, 666, 984, 1047, 1256, 1607, 1730
TasI AATT 6 cut(s) 859, 871, 1175, 1258, 1398, 1654
TatI WGTACW 1 cut(s) 1145
TauI GCSGC 9 cut(s) 21, 138, 256, 311, 328, 495, 498, 539, 542
TfiI GAWTC 4 cut(s) 5, 616, 1049, 1668
Tru1I TTAA 7 cut(s) 360, 390, 522, 606, 621, 1664, 1695
Tru9I TTAA 7 cut(s) 360, 390, 522, 606, 621, 1664, 1695
TscAI CASTG 5 cut(s) 211, 808, 955, 1693, 1746
TseFI GTSAC 4 cut(s) 784, 829, 1348, 1737
TseI GCWGC 5 cut(s) 13, 298, 448, 533, 710
Tsp45I GTSAC 4 cut(s) 784, 829, 1348, 1737
TspDTI ATGAA 2 cut(s) 985, 1188
TspGWI ACGGA 2 cut(s) 422, 1305
TspRI CASTG 5 cut(s) 211, 808, 955, 1693, 1746
Tth111I GACNNNGTC 1 cut(s) 1735
VneI GTGCAC 1 cut(s) 1442
VpaK11BI GGWCC 5 cut(s) 42, 265, 424, 1042, 1313
XagI CCTNNNNNAGG 1 cut(s) 1626
XapI RAATTY 2 cut(s) 1175, 1258
XcmI CCANNNNNNNNNTGG 1 cut(s) 974
XmaJI CCTAGG 1 cut(s) 1190
XmiI GTMKAC 1 cut(s) 404
XspI CTAG 1 cut(s) 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.