MD16G1083500.v1.1

UPF0392 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0014925
Physical Location & Seq
Reverse (-)
5845483 .. 5847348
1866 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1083500.v1.1.491

Sequence Viewer

Length: 1827 bp
ATGGAGTTGCCAGAGCAGCGCCGCAAGCGGAAGCGCATGGTGCGGTCCTACTTACAGGCCAAGCAGTACTTGTCTCTGAGGCGACCCATCTTTCTCTGCTTCTCGTTCTTTATCTTCTTTCTGTGCGTATTATCCGACCGCTTCCGCCCGGCGTCGTTTCGGCCAGTACTCAACACCTCCTCCACCACCCTCTCCCTCCTCTCCTCCACCGCCAGCAACTCGATACTCCAGTCCTTCGCCGCCCACGGCAAAGAATCGCAGCCGTCGTTTCGAGTCCAAGATCGAATCTTGTTTCCCGATCACGTGCTTCTCATTGCGCCCAATCGGTTCCGCCAAGACGACCAGTTGGAGTGCGTTTACCACAAGCAGTTCAACGGTTCGGGTGACGACATTCTTGAAGGTAAAGAAAAGAATAAGCACCTGGATTTTGCTGTTCGACCGGTTTTATCCACCGACGACTACGATGAGTTCCGGTCCATTGTCCGGTGTCCGCTGCCGCCGCTCAGTTTCTCCACAGCCATTGATTTGCGACGACACGGCAGTTACGACTCGACGGCTGGGACTAACGGCACGGCTTCTCCATGGGACAAGGTGGTTTACGAGGCGGTTATTGACGGAGACACGGCGGTTGTGTTCGTTAAGGGGCTGAAACTCCGACCTCACAAGATAACGGATCCGACCTGGCTAAGATGTTATTTCGAGTTGGGGATTTTGGACAGAGACGAAAACCACGGCGTCTCTGTGCTCTCCACCGAAGCCGTCACCGCCGCTCAAGAAGTCGTCCGGTGCCTCCTCCCCCGGACTATCCGTAACAACCCCCACGGAATCCGAGTCACAGTCGGGTACAACACCAGCCACCCCAGAGCTCCAGTCCACGTCACTCTGCCTTCCGTGGCCACAATTCACAGTTCCAAATCCAATCCAGTCCAATCCAATCCGAAGAAGCACGAGCTTTGTGTTTGCACAATGCTGTGGAACCAAGCACCGGCGATTAGGGAGTGGATTATGTATCACTCGTGGCTCGGCGTCGAGCGGTGGTTCATCTACGACAACAACAGCGACGACGGAATTGAAGATGTCGTTCGGGAGCTCGATTGGCAGAACTACAATGTCAGCAGACAGAGCTGGCCGTGGATCAAAACCCAAGAAGCAGGCTTTTCCCACTGCGCCTTGAAAGCAAAAGACGAGTGCAATTGGGTCGGATTCTTTGACGTGGACGAGTTCTTCTACTTCCCGCGCGCGTTCCGCCGCCACGGAGGAGACTTCAGTGTTCCAGGGGAGAACTCTCTGCGAAAACTGGTTTCGAATTTTTCAAATTCAGCCACCGTTGCTGAAATTAGAACCGATTGCCGCAGCTTCGGGCCATCAGGGCTGAGCTCGCACCCGTCGCAGGGAGTCACGGTGGGGTACACTTGCCGGCTGCAGAGTCCCGAGCGACACAAGTCGATCGTGCGGACGGAGCTGCTCGACGTAACTCTGCTCAATGTGGTGCACCATTTCAGGCTGAGAGAGGGATACAGGCACGTCAATGTGCCGGAGGGAATCGCGGTGATCAACCACTATAAGTACCAGGTGTGGGAGACTTTCAGGGCCAAGTTTTTCAGGAGGGTGGCGACCTACGTGGTTGACTGGCAGGAGGATCAGAATAAGGGGTCGAAAGATAGGGCGCCGGGGCTGGGGACGGAGGCGGTTGAGCCGTCCAATTGGCGGCTGAGGTTCTGTGAGGTTTGGGACACCGGGCTGAAGGACTTTGTTCTGGGGTACTTCGTTGATCCTGTAACTAGGTTGCTGCCATGGGAGAAGAAGTCTCGCACTTCTGCACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

609

Amino Acids

69.92

Weight (kDa)

8.9

Isoelectric Point (pI)

46.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 315 - 548 1.3e-36 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 326 - 414 1.2e-12 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27200
fragaria_vesca FvH4_4g35330
malus_domestica MD16G1083500.v1.1
prunus_persica Prupe.1G262500_v2.0.a1
pyrus_communis pycom13g07280 pycom16g07240
rosa_chinensis RchiOBHm_Chr4g0444941
rosa_laevigata RLG00000005785
rosa_multiflora Rmu_sc0011561.1_g000002 Rmu_sc0038487.1_g000001
rosa_roxburghii Rroxscaffold_5G00385430
rosa_rugosa Rorug04G0356500
rosa_samantha Rh4BG429800 Rh4CG444700 Rh4DG425900
rosa_wichuraiana Rw4G035840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 786, 1666
AccBSI CCGCTC 3 cut(s) 502, 770, 1033
AccII CGCG 4 cut(s) 1237, 1239, 1241, 1547
AclWI GGATC 5 cut(s) 668, 681, 1142, 1647, 1766
AcoI YGGCCR 3 cut(s) 161, 894, 1127
AcsI RAATTY 2 cut(s) 1306, 1315
AcuI CTGAAG 2 cut(s) 1249, 1763
AcvI CACGTG 1 cut(s) 304
AcyI GRCGYC 4 cut(s) 152, 735, 1026, 1667
AfaI GTAC 6 cut(s) 68, 168, 845, 1409, 1568, 1763
AfiI CCNNNNNNNGG 7 cut(s) 483, 985, 1390, 1391, 1576, 1676, 1707
AgeI ACCGGT 1 cut(s) 439
AgsI TTSAA 5 cut(s) 373, 398, 1073, 1174, 1314
AjiI CACGTC 3 cut(s) 877, 1213, 1525
AjnI CCWGG 4 cut(s) 420, 680, 1273, 1569
AluBI AGCT 7 cut(s) 866, 952, 1090, 1125, 1356, 1377, 1462
AluI AGCT 7 cut(s) 866, 952, 1090, 1125, 1356, 1377, 1462
Alw21I GWGCWC 5 cut(s) 747, 868, 1092, 1379, 1494
Alw26I GTCTC 7 cut(s) 78, 612, 714, 742, 1254, 1574, 1812
Alw44I GTGCAC 1 cut(s) 1490
AlwI GGATC 5 cut(s) 668, 681, 1142, 1647, 1766
Ama87I CYCGRG 1 cut(s) 1430
AoxI GGCC 6 cut(s) 57, 161, 894, 1127, 1361, 1590
ApaLI GTGCAC 1 cut(s) 1490
ApeKI GCWGC 7 cut(s) 16, 259, 493, 1353, 1420, 1462, 1789
ApoI RAATTY 2 cut(s) 1306, 1315
AsiGI ACCGGT 1 cut(s) 439
AspLEI GCGC 7 cut(s) 21, 36, 319, 1169, 1239, 1241, 1669
AspS9I GGNCC 4 cut(s) 45, 474, 1361, 1590
AsuC2I CCSGG 4 cut(s) 149, 799, 1671, 1738
AsuHPI GGTGA 3 cut(s) 395, 754, 1561
AsuII TTCGAA 1 cut(s) 1304
AvaI CYCGRG 1 cut(s) 1430
AvaII GGWCC 2 cut(s) 45, 474
BaeGI GKGCMC 1 cut(s) 1494
BaeI ACNNNNGTAYC 2 cut(s) 215, 248
BalI TGGCCA 1 cut(s) 896
BamHI GGATCC 1 cut(s) 673
BanI GGYRCC 2 cut(s) 786, 1666
BanII GRGCYC 3 cut(s) 868, 1092, 1379
BauI CACGAG 2 cut(s) 947, 1015
BbrPI CACGTG 1 cut(s) 304
Bbv12I GWGCWC 5 cut(s) 747, 868, 1092, 1379, 1494
BbvCI CCTCAGC 1 cut(s) 1712
BbvI GCAGC 7 cut(s) 28, 271, 480, 1365, 1407, 1449, 1776
BccI CCATC 2 cut(s) 95, 1372
BcgI CGANNNNNNTGC 2 cut(s) 1180, 1214
BciT130I CCWGG 4 cut(s) 422, 682, 1275, 1571
BciVI GTATCC 1 cut(s) 1508
BclI TGATCA 1 cut(s) 1551
BcnI CCSGG 4 cut(s) 149, 799, 1671, 1738
BcoDI GTCTC 7 cut(s) 78, 612, 714, 742, 1254, 1574, 1812
BfaI CTAG 1 cut(s) 1782
BfmI CTRYAG 1 cut(s) 1421
BfoI RGCGCY 2 cut(s) 22, 1670
BfuI GTATCC 1 cut(s) 1508
BglI GCCNNNNNGGC 1 cut(s) 1369
BlpI GCTNAGC 1 cut(s) 1373
BmcAI AGTACT 2 cut(s) 68, 168
Bme1390I CCNGG 8 cut(s) 149, 422, 682, 799, 1275, 1571, 1671, 1738
Bme18I GGWCC 2 cut(s) 45, 474
BmeT110I CYCGRG 1 cut(s) 1430
BmgBI CACGTC 3 cut(s) 877, 1213, 1525
BmgT120I GGNCC 4 cut(s) 45, 474, 1361, 1590
BmiI GGNNCC 5 cut(s) 329, 675, 788, 977, 1668
BmrFI CCNGG 8 cut(s) 149, 422, 682, 799, 1275, 1571, 1671, 1738
BoxI GACNNNNGTC 1 cut(s) 1441
BpmI CTGGAG 2 cut(s) 212, 852
Bpu10I CCTNAGC 1 cut(s) 1712
Bpu1102I GCTNAGC 1 cut(s) 1373
Bpu14I TTCGAA 1 cut(s) 1304
BpuEI CTTGAG 1 cut(s) 756
BpuMI CCSGG 4 cut(s) 149, 799, 1671, 1738
BsaAI YACGTR 2 cut(s) 304, 1621
BsaHI GRCGYC 4 cut(s) 152, 735, 1026, 1667
BsaWI WCCGGW 4 cut(s) 439, 471, 483, 783
BsaXI ACNNNNNCTCC 8 cut(s) 164, 194, 562, 592, 1386, 1416, 1790, 1820
Bsc4I CCNNNNNNNGG 7 cut(s) 483, 985, 1390, 1391, 1576, 1676, 1707
Bse118I RCCGGY 3 cut(s) 439, 985, 1416
Bse1I ACTGG 7 cut(s) 164, 229, 343, 869, 923, 1302, 1634
Bse3DI GCAATG 1 cut(s) 312
BseBI CCWGG 4 cut(s) 422, 682, 1275, 1571
BseLI CCNNNNNNNGG 7 cut(s) 483, 985, 1390, 1391, 1576, 1676, 1707
BseMI GCAATG 1 cut(s) 312
BseMII CTCAG 5 cut(s) 68, 517, 1364, 1496, 1703
BseNI ACTGG 7 cut(s) 164, 229, 343, 869, 923, 1302, 1634
BsePI GCGCGC 1 cut(s) 1237
BseRI GAGGAG 5 cut(s) 169, 188, 193, 782, 1272
BseSI GKGCMC 1 cut(s) 1494
BseXI GCAGC 7 cut(s) 28, 271, 480, 1365, 1407, 1449, 1776
BseYI CCCAGC 2 cut(s) 557, 1675
BsgI GTGCAG 1 cut(s) 1803
Bsh1236I CGCG 4 cut(s) 1237, 1239, 1241, 1547
Bsh1285I CGRYCG 3 cut(s) 139, 440, 1449
BshFI GGCC 6 cut(s) 59, 163, 896, 1129, 1363, 1592
BshNI GGYRCC 2 cut(s) 786, 1666
BshTI ACCGGT 1 cut(s) 439
BsiEI CGRYCG 3 cut(s) 139, 440, 1449
BsiHKAI GWGCWC 5 cut(s) 747, 868, 1092, 1379, 1494
BsiHKCI CYCGRG 1 cut(s) 1430
BslFI GGGAC 5 cut(s) 574, 599, 1413, 1693, 1745
BslI CCNNNNNNNGG 7 cut(s) 483, 985, 1390, 1391, 1576, 1676, 1707
BsmAI GTCTC 7 cut(s) 78, 612, 714, 742, 1254, 1574, 1812
BsmBI CGTCTC 2 cut(s) 714, 742
BsmFI GGGAC 5 cut(s) 574, 599, 1413, 1693, 1745
BsnI GGCC 6 cut(s) 59, 163, 896, 1129, 1363, 1592
BsoBI CYCGRG 1 cut(s) 1430
Bsp119I TTCGAA 1 cut(s) 1304
Bsp1286I GDGCHC 5 cut(s) 747, 868, 1092, 1379, 1494
Bsp143I GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
Bsp1720I GCTNAGC 1 cut(s) 1373
Bsp19I CCATGG 2 cut(s) 581, 1793
BspANI GGCC 6 cut(s) 59, 163, 896, 1129, 1363, 1592
BspCNI CTCAG 5 cut(s) 69, 516, 1365, 1497, 1704
BspFNI CGCG 4 cut(s) 1237, 1239, 1241, 1547
BspLI GGNNCC 5 cut(s) 329, 675, 788, 977, 1668
BspMAI CTGCAG 1 cut(s) 1425
BspPI GGATC 5 cut(s) 668, 681, 1142, 1647, 1766
BspT104I TTCGAA 1 cut(s) 1304
BspT107I GGYRCC 2 cut(s) 786, 1666
BsrBI CCGCTC 3 cut(s) 502, 770, 1033
BsrDI GCAATG 1 cut(s) 312
BsrFI RCCGGY 3 cut(s) 439, 985, 1416
BsrI ACTGG 7 cut(s) 164, 229, 343, 869, 923, 1302, 1634
BssAI RCCGGY 3 cut(s) 439, 985, 1416
BssHII GCGCGC 1 cut(s) 1237
BssMI GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
BssNI GRCGYC 4 cut(s) 152, 735, 1026, 1667
BssSI CACGAG 2 cut(s) 947, 1015
BssT1I CCWWGG 2 cut(s) 581, 1793
Bst2BI CACGAG 2 cut(s) 947, 1015
Bst2UI CCWGG 4 cut(s) 422, 682, 1275, 1571
Bst4CI ACNGT 6 cut(s) 377, 838, 908, 1327, 1402, 1824
BstACI GRCGYC 4 cut(s) 152, 735, 1026, 1667
BstBAI YACGTR 2 cut(s) 304, 1621
BstBI TTCGAA 1 cut(s) 1304
BstC8I GCNNGC 7 cut(s) 26, 214, 1127, 1153, 1239, 1379, 1418
BstDEI CTNAG 6 cut(s) 77, 503, 686, 1373, 1505, 1712
BstDSI CCRYGG 8 cut(s) 244, 581, 730, 820, 891, 1130, 1252, 1793
BstFNI CGCG 4 cut(s) 1237, 1239, 1241, 1547
BstH2I RGCGCY 2 cut(s) 22, 1670
BstHHI GCGC 7 cut(s) 21, 36, 319, 1169, 1239, 1241, 1669
BstKTI GATC 8 cut(s) 283, 301, 676, 1137, 1449, 1554, 1642, 1774
BstMAI GTCTC 7 cut(s) 78, 612, 714, 742, 1254, 1574, 1812
BstMBI GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
BstMCI CGRYCG 3 cut(s) 139, 440, 1449
BstNI CCWGG 4 cut(s) 422, 682, 1275, 1571
BstPAI GACNNNNGTC 1 cut(s) 1441
BstSCI CCNGG 8 cut(s) 147, 420, 680, 797, 1273, 1569, 1669, 1736
BstSFI CTRYAG 1 cut(s) 1421
BstSLI GKGCMC 1 cut(s) 1494
BstUI CGCG 4 cut(s) 1237, 1239, 1241, 1547
BstV1I GCAGC 7 cut(s) 28, 271, 480, 1365, 1407, 1449, 1776
BstX2I RGATCY 1 cut(s) 673
BstYI RGATCY 1 cut(s) 673
BsuI GTATCC 1 cut(s) 1508
BsuRI GGCC 6 cut(s) 59, 163, 896, 1129, 1363, 1592
BtgI CCRYGG 8 cut(s) 244, 581, 730, 820, 891, 1130, 1252, 1793
BtrI CACGTC 3 cut(s) 877, 1213, 1525
BtsI GCAGTG 1 cut(s) 1162
BtsIMutI CAGTG 2 cut(s) 1162, 1273
Cac8I GCNNGC 7 cut(s) 26, 214, 1127, 1153, 1239, 1379, 1418
CfoI GCGC 7 cut(s) 21, 36, 319, 1169, 1239, 1241, 1669
Cfr10I RCCGGY 3 cut(s) 439, 985, 1416
Cfr13I GGNCC 4 cut(s) 45, 474, 1361, 1590
CseI GACGC 3 cut(s) 141, 724, 1015
CsiI ACCWGGT 1 cut(s) 1569
Csp6I GTAC 6 cut(s) 67, 167, 844, 1408, 1567, 1762
CspAI ACCGGT 1 cut(s) 439
CspCI CAANNNNNGTGG 2 cut(s) 502, 537
CviAII CATG 3 cut(s) 37, 582, 1794
CviQI GTAC 6 cut(s) 67, 167, 844, 1408, 1567, 1762
DdeI CTNAG 6 cut(s) 77, 503, 686, 1373, 1505, 1712
DinI GGCGCC 1 cut(s) 1668
DpnI GATC 8 cut(s) 282, 300, 675, 1136, 1448, 1553, 1641, 1773
DpnII GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
EaeI YGGCCR 3 cut(s) 161, 894, 1127
EciI GGCGGA 3 cut(s) 134, 320, 1235
Ecl136II GAGCTC 3 cut(s) 866, 1090, 1377
Eco130I CCWWGG 2 cut(s) 581, 1793
Eco24I GRGCYC 3 cut(s) 868, 1092, 1379
Eco47I GGWCC 2 cut(s) 45, 474
Eco53kI GAGCTC 3 cut(s) 866, 1090, 1377
Eco57I CTGAAG 2 cut(s) 1249, 1763
Eco72I CACGTG 1 cut(s) 304
Eco88I CYCGRG 1 cut(s) 1430
EcoICRI GAGCTC 3 cut(s) 866, 1090, 1377
EcoRII CCWGG 4 cut(s) 420, 680, 1273, 1569
EcoT14I CCWWGG 2 cut(s) 581, 1793
EcoT38I GRGCYC 3 cut(s) 868, 1092, 1379
EgeI GGCGCC 1 cut(s) 1668
EheI GGCGCC 1 cut(s) 1668
ErhI CCWWGG 2 cut(s) 581, 1793
Esp3I CGTCTC 2 cut(s) 714, 742
FaeI CATG 3 cut(s) 40, 585, 1797
FaiI YATR 5 cut(s) 38, 583, 1007, 1563, 1795
FalI AAGNNNNNCTT 2 cut(s) 53, 85
FaqI GGGAC 5 cut(s) 574, 599, 1413, 1693, 1745
FatI CATG 3 cut(s) 36, 581, 1793
FauI CCCGC 1 cut(s) 1242
FbaI TGATCA 1 cut(s) 1551
FriOI GRGCYC 3 cut(s) 868, 1092, 1379
FspBI CTAG 1 cut(s) 1782
GlaI GCGC 7 cut(s) 20, 35, 318, 1168, 1238, 1240, 1668
GsaI CCCAGC 2 cut(s) 561, 1679
GsuI CTGGAG 2 cut(s) 212, 852
HaeII RGCGCY 2 cut(s) 22, 1670
HaeIII GGCC 6 cut(s) 59, 163, 896, 1129, 1363, 1592
HgaI GACGC 3 cut(s) 141, 724, 1015
HhaI GCGC 7 cut(s) 21, 36, 319, 1169, 1239, 1241, 1669
Hin1I GRCGYC 4 cut(s) 152, 735, 1026, 1667
Hin1II CATG 3 cut(s) 40, 585, 1797
Hin6I GCGC 7 cut(s) 19, 34, 317, 1167, 1237, 1239, 1667
HinP1I GCGC 7 cut(s) 19, 34, 317, 1167, 1237, 1239, 1667
HincII GTYRAC 1 cut(s) 1627
HindII GTYRAC 1 cut(s) 1627
HphI GGTGA 3 cut(s) 395, 754, 1561
Hpy166II GTNNAC 7 cut(s) 358, 598, 874, 1216, 1410, 1492, 1627
Hpy188I TCNGA 8 cut(s) 78, 136, 656, 678, 830, 939, 1202, 1644
Hpy188III TCNNGA 6 cut(s) 296, 395, 773, 1085, 1430, 1603
Hpy8I GTNNAC 7 cut(s) 358, 598, 874, 1216, 1410, 1492, 1627
HpyAV CCTTC 4 cut(s) 244, 392, 897, 1738
HpyCH4III ACNGT 6 cut(s) 377, 838, 908, 1327, 1402, 1824
HpyCH4IV ACGT 6 cut(s) 303, 876, 1212, 1470, 1524, 1620
HpyCH4V TGCA 5 cut(s) 963, 1191, 1423, 1492, 1820
HpyF3I CTNAG 6 cut(s) 77, 503, 686, 1373, 1505, 1712
HpySE526I ACGT 6 cut(s) 303, 876, 1212, 1470, 1524, 1620
Hsp92I GRCGYC 4 cut(s) 152, 735, 1026, 1667
Hsp92II CATG 3 cut(s) 40, 585, 1797
HspAI GCGC 7 cut(s) 19, 34, 317, 1167, 1237, 1239, 1667
KasI GGCGCC 1 cut(s) 1666
KroI GCCGGC 1 cut(s) 1416
KroNI GCCGGC 1 cut(s) 1418
Ksp22I TGATCA 1 cut(s) 1551
Kzo9I GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
LmnI GCTCC 3 cut(s) 871, 1087, 1459
Lsp1109I GCAGC 7 cut(s) 28, 271, 480, 1365, 1407, 1449, 1776
MabI ACCWGGT 1 cut(s) 1569
MaeI CTAG 1 cut(s) 1782
MaeII ACGT 6 cut(s) 303, 876, 1212, 1470, 1524, 1620
MaeIII GTNAC 9 cut(s) 383, 542, 760, 809, 832, 877, 1396, 1471, 1777
MalI GATC 8 cut(s) 282, 300, 675, 1136, 1448, 1553, 1641, 1773
MauBI CGCGCGCG 1 cut(s) 1237
MbiI CCGCTC 3 cut(s) 502, 770, 1033
MboI GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
MboII GAAGA 5 cut(s) 106, 952, 1085, 1216, 1813
MfeI CAATTG 2 cut(s) 1192, 1702
MflI RGATCY 1 cut(s) 673
MhlI GDGCHC 5 cut(s) 747, 868, 1092, 1379, 1494
MlsI TGGCCA 1 cut(s) 896
MluCI AATT 7 cut(s) 900, 1068, 1192, 1306, 1315, 1335, 1702
MluNI TGGCCA 1 cut(s) 896
Mly113I GGCGCC 1 cut(s) 1667
MlyI GAGTC 5 cut(s) 282, 542, 840, 1404, 1435
MmeI TCCRAC 5 cut(s) 159, 327, 679, 701, 1180
Mox20I TGGCCA 1 cut(s) 896
MroNI GCCGGC 1 cut(s) 1416
MscI TGGCCA 1 cut(s) 896
MseI TTAA 1 cut(s) 639
MslI CAYNNNNRTG 1 cut(s) 1527
Msp20I TGGCCA 1 cut(s) 896
MspA1I CMGCKG 1 cut(s) 493
MspR9I CCNGG 8 cut(s) 149, 422, 682, 799, 1275, 1571, 1671, 1738
MunI CAATTG 2 cut(s) 1192, 1702
MvaI CCWGG 4 cut(s) 422, 682, 1275, 1571
MvnI CGCG 4 cut(s) 1237, 1239, 1241, 1547
NaeI GCCGGC 1 cut(s) 1418
NarI GGCGCC 1 cut(s) 1667
NciI CCSGG 4 cut(s) 149, 799, 1671, 1738
NcoI CCATGG 2 cut(s) 581, 1793
NdeII GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
NgoMIV GCCGGC 1 cut(s) 1416
NlaIII CATG 3 cut(s) 40, 585, 1797
NlaIV GGNNCC 5 cut(s) 329, 675, 788, 977, 1668
NmeAIII GCCGAG 1 cut(s) 1002
NmuCI GTSAC 5 cut(s) 383, 760, 832, 877, 1396
NspV TTCGAA 1 cut(s) 1304
PauI GCGCGC 1 cut(s) 1237
PcsI WCGNNNNNNNCGW 2 cut(s) 263, 543
PdiI GCCGGC 1 cut(s) 1418
PfeI GAWTC 5 cut(s) 254, 285, 825, 1203, 1542
PinAI ACCGGT 1 cut(s) 439
Ple19I CGATCG 1 cut(s) 1449
PleI GAGTC 5 cut(s) 281, 542, 839, 1403, 1434
PluTI GGCGCC 1 cut(s) 1670
PmaCI CACGTG 1 cut(s) 304
PmlI CACGTG 1 cut(s) 304
PpsI GAGTC 5 cut(s) 281, 542, 839, 1403, 1434
Ppu21I YACGTR 2 cut(s) 304, 1621
PshAI GACNNNNGTC 1 cut(s) 1441
Psp124BI GAGCTC 3 cut(s) 868, 1092, 1379
Psp6I CCWGG 4 cut(s) 420, 680, 1273, 1569
PspCI CACGTG 1 cut(s) 304
PspFI CCCAGC 2 cut(s) 557, 1675
PspGI CCWGG 4 cut(s) 420, 680, 1273, 1569
PspN4I GGNNCC 5 cut(s) 329, 675, 788, 977, 1668
PspPI GGNCC 4 cut(s) 45, 474, 1361, 1590
PstI CTGCAG 1 cut(s) 1425
PsuI RGATCY 1 cut(s) 673
PteI GCGCGC 1 cut(s) 1237
PvuI CGATCG 1 cut(s) 1449
RsaI GTAC 6 cut(s) 68, 168, 845, 1409, 1568, 1763
RsaNI GTAC 6 cut(s) 67, 167, 844, 1408, 1567, 1762
RseI CAYNNNNRTG 1 cut(s) 1527
SacI GAGCTC 3 cut(s) 868, 1092, 1379
SaqAI TTAA 1 cut(s) 639
Sau3AI GATC 8 cut(s) 280, 298, 673, 1134, 1446, 1551, 1639, 1771
Sau96I GGNCC 4 cut(s) 45, 474, 1361, 1590
ScaI AGTACT 2 cut(s) 68, 168
SchI GAGTC 5 cut(s) 282, 542, 840, 1404, 1435
ScrFI CCNGG 8 cut(s) 149, 422, 682, 799, 1275, 1571, 1671, 1738
SduI GDGCHC 5 cut(s) 747, 868, 1092, 1379, 1494
SexAI ACCWGGT 1 cut(s) 1569
SfcI CTRYAG 1 cut(s) 1421
SfoI GGCGCC 1 cut(s) 1668
SfuI TTCGAA 1 cut(s) 1304
SgrAI CRCCGGYG 1 cut(s) 985
SinI GGWCC 2 cut(s) 45, 474
SmiMI CAYNNNNRTG 1 cut(s) 1527
SmlI CTYRAG 1 cut(s) 771
SmoI CTYRAG 1 cut(s) 771
Sse9I AATT 7 cut(s) 900, 1068, 1192, 1306, 1315, 1335, 1702
SspDI GGCGCC 1 cut(s) 1666
SspMI CTAG 1 cut(s) 1782
SstI GAGCTC 3 cut(s) 868, 1092, 1379
StyD4I CCNGG 8 cut(s) 147, 420, 680, 797, 1273, 1569, 1669, 1736
StyI CCWWGG 2 cut(s) 581, 1793
TaaI ACNGT 6 cut(s) 377, 838, 908, 1327, 1402, 1824
TaiI ACGT 6 cut(s) 306, 879, 1215, 1473, 1527, 1623
TasI AATT 7 cut(s) 900, 1068, 1192, 1306, 1315, 1335, 1702
TatI WGTACW 2 cut(s) 66, 166
TauI GCSGC 8 cut(s) 24, 242, 499, 502, 770, 1251, 1353, 1711
TfiI GAWTC 5 cut(s) 254, 285, 825, 1203, 1542
Tru1I TTAA 1 cut(s) 639
Tru9I TTAA 1 cut(s) 639
TscAI CASTG 2 cut(s) 1169, 1273
TseFI GTSAC 5 cut(s) 383, 760, 832, 877, 1396
TseI GCWGC 7 cut(s) 16, 259, 493, 1353, 1420, 1462, 1789
Tsp45I GTSAC 5 cut(s) 383, 760, 832, 877, 1396
TspDTI ATGAA 1 cut(s) 1030
TspGWI ACGGA 9 cut(s) 630, 686, 797, 837, 880, 1080, 1269, 1472, 1697
TspRI CASTG 2 cut(s) 1169, 1273
VneI GTGCAC 1 cut(s) 1490
VpaK11BI GGWCC 2 cut(s) 45, 474
XapI RAATTY 2 cut(s) 1306, 1315
XspI CTAG 1 cut(s) 1782
ZrmI AGTACT 2 cut(s) 68, 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.