Rw4G035840

UPF0392 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0014925
Physical Location & Seq
Forward (+)
62676973 .. 62678709
1737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G035840.1

Sequence Viewer

Length: 1737 bp
ATGGGGCGGTCCTACTCTGAGGCCAAGCACTACTTGTCGTCGCGGAGGTCTCTCTTTCTCTGCTTCTCCTTCTTCGTCTTCCTTCTTCTCTTGTCCTCCGGCCGCTTCAGAACGGCGTCGTTTCGGCCAGTCATCACCGCCTCCTCCACCACTCTCTATCTCATCTCCTCCACTGCCCACAACTCGGTTCTTGACTCGGTTGCTCACCGGAACGACTCGCCGCCGGCGAAGGTCCAAGATCGGGTCTTGTTTCCCGATCACGTGCTGCTCATCGCGGCCAACCGGTTTCAGCCGCAGGATGAGTTGGATTGCGTTTACCGGAGATTTAACGGCTCCGATGAGGTCGCTTTCGCCGTTAAGCCGGTGCTGTCGACGGAGGCTTACGATGAGGTCCGGTCAATCGTGCGGTGTCCGCTGCCGTTCGGGAACTACTCGTCGGCCGTCGATTTGAGGAGGCGCGGCGGCAAACATGATTGGACGGCGAGGATTAACTCGACGGCTGCGGCGGCTTCTCCTTGGGATAAGGTGGTTTACGAGGCGGTTATTGATGACGACACGGCGGTTGTGTTCGTTAAGGGGTTGAATCTTAGACCGCACAGAAAGTCCGACCCGACCCGACTCACCTGCCATTTCGAGATGGGCGAAGGGTTTGAGTTCACTACCGAAGCCGTTACGGCAGCTCAGGAAGTTGTGAGGTGTTTGTTGCCAGAGAGCATTAGCAACGACCCGGATAAGGCTTCGGGTATTCGGGTCACAATTGGGTTCAGCACTGGGCGTCCGAGAGCTGCAGTCCATGTGACTCTTCCTTCTGTGGCCACAATCCACAATTCAAAGCCCAATTTGGATGAGGCCACCAAGAAGAAGAAGCATGAGCTTTGTGCTTGCACTATGTTGTGGAACCAAGCCCCTGCGCTCAGTGAGTGGATCATGTACCATGCTTGGCTTGGAGTCGAGCGGTGGTTCATTTACGACAACAATAGTGATGATGGGATTGAAGATGTGGTTTTGGACCTCGATTCGCAGGGCTACAATGTCACTAGGCAGTCCTGGCCATGGATCAAGACTCAGGAAGCAGGGTTTTCGCATTGTGCTTTGAAAGCGAGAGAGGAATGTACTTGGGTTGGTTTCTTTGATGTGGATGAGTTCTTCTACTTCCCTAGGGAGTTCAGGAGACGTAGAAGATATGGCGTTCCTGGCGAAAACTGGCTCGGGAAGCTGGTTTCGAATTTTTCAAACTCTCCGACGATTGCAGAGCTGAGAACTGATTGCCATAGTTTTGGTCCGTCCGGGTTGAGATCACATCCATCACGGGGAGTGACCACAGGGTACACTTGCCGGTTGCAAAGCCCCGAAAGGCACAAGTCAATTGTCCGAACAGATTTGCTTGATGTTACATTGCTCAATGTGGTGCACCATTTCAGGCTGAGAGAGGGTTTTAGGCACCTGAACGTGCCGGAAGGCATTGCGGTGATAAACCACTACAAGTACCAGGTTTGGGAGACCTTCAGGGCCAAGTTTTACAGAAGGGTTGCTACATATGTTGTGGATTGGCAGGAAGATCAAAACCAGGGGTCGAAGGATAGAGCACCTGGGTTAGGAACAGAGGCCATTGAACCGCCGAATTGGAGGTTAAGATTCTGTGAGGTTTGGGACACTGGCCTTAAAGACTTTGTTTTGGCTTACTTTGCTGATCATTCGACTGGGTCACTGCCATGGGAGAGGGCTCGACATCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

578

Amino Acids

65.99

Weight (kDa)

8.19

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 289 - 522 7.3e-36 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 300 - 387 7.5e-13 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27200
fragaria_vesca FvH4_4g35330
malus_domestica MD16G1083500.v1.1
prunus_persica Prupe.1G262500_v2.0.a1
pyrus_communis pycom13g07280 pycom16g07240
rosa_chinensis RchiOBHm_Chr4g0444941
rosa_laevigata RLG00000005785
rosa_multiflora Rmu_sc0011561.1_g000002 Rmu_sc0038487.1_g000001
rosa_roxburghii Rroxscaffold_5G00385430
rosa_rugosa Rorug04G0356500
rosa_samantha Rh4BG429800 Rh4CG444700 Rh4DG425900
rosa_wichuraiana Rw4G035840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 632
Acc36I ACCTGC 1 cut(s) 632
AccB1I GGYRCC 1 cut(s) 1440
AccBSI CCGCTC 1 cut(s) 955
AccI GTMKAC 1 cut(s) 371
AccII CGCG 3 cut(s) 43, 275, 459
AclWI GGATC 2 cut(s) 932, 1064
AcoI YGGCCR 6 cut(s) 100, 125, 276, 438, 813, 1049
AcsI RAATTY 1 cut(s) 1225
AcuI CTGAAG 2 cut(s) 91, 1489
AcvI CACGTG 1 cut(s) 262
AcyI GRCGYC 2 cut(s) 116, 775
AfaI GTAC 4 cut(s) 932, 1114, 1328, 1487
AfiI CCNNNNNNNGG 7 cut(s) 184, 241, 733, 1053, 1310, 1495, 1595
AgeI ACCGGT 1 cut(s) 282
AgsI TTSAA 6 cut(s) 583, 831, 995, 1096, 1233, 1613
AjnI CCWGG 5 cut(s) 1046, 1192, 1488, 1566, 1588
AluBI AGCT 5 cut(s) 680, 785, 874, 1216, 1255
AluI AGCT 5 cut(s) 680, 785, 874, 1216, 1255
Alw21I GWGCWC 2 cut(s) 1413, 1588
Alw26I GTCTC 3 cut(s) 54, 1165, 1493
Alw44I GTGCAC 1 cut(s) 1409
AlwI GGATC 2 cut(s) 932, 1064
Ama87I CYCGRG 1 cut(s) 1208
ApaLI GTGCAC 1 cut(s) 1409
ApeKI GCWGC 5 cut(s) 265, 415, 500, 677, 785
ApoI RAATTY 1 cut(s) 1225
AsiGI ACCGGT 1 cut(s) 282
AspA2I CCTAGG 1 cut(s) 1157
AspLEI GCGC 2 cut(s) 459, 913
AspS9I GGNCC 6 cut(s) 9, 232, 391, 1009, 1280, 1509
AsuC2I CCSGG 2 cut(s) 728, 1288
AsuHPI GGTGA 4 cut(s) 127, 197, 613, 1480
AsuII TTCGAA 1 cut(s) 1223
AvaI CYCGRG 1 cut(s) 1208
AvaII GGWCC 5 cut(s) 9, 232, 391, 1009, 1280
AvrII CCTAGG 1 cut(s) 1157
BaeGI GKGCMC 1 cut(s) 1413
BalI TGGCCA 2 cut(s) 815, 1051
BanI GGYRCC 1 cut(s) 1440
BanII GRGCYC 1 cut(s) 1726
BarI GAAGNNNNNNTAC 2 cut(s) 1516, 1548
BbrPI CACGTG 1 cut(s) 262
BbsI GAAGAC 1 cut(s) 70
Bbv12I GWGCWC 2 cut(s) 1413, 1588
BbvI GCAGC 5 cut(s) 252, 402, 487, 689, 772
BccI CCATC 3 cut(s) 631, 980, 1312
BcgI CGANNNNNNTGC 4 cut(s) 606, 640, 1062, 1096
BciT130I CCWGG 5 cut(s) 1048, 1194, 1490, 1568, 1590
BclI TGATCA 1 cut(s) 1690
BcnI CCSGG 2 cut(s) 728, 1288
BcoDI GTCTC 3 cut(s) 54, 1165, 1493
BfaI CTAG 2 cut(s) 1038, 1158
BfmI CTRYAG 1 cut(s) 786
BfuAI ACCTGC 1 cut(s) 632
BglI GCCNNNNNGGC 1 cut(s) 674
BlnI CCTAGG 1 cut(s) 1157
Bme1390I CCNGG 7 cut(s) 728, 1048, 1194, 1288, 1490, 1568, 1590
Bme18I GGWCC 5 cut(s) 9, 232, 391, 1009, 1280
BmeT110I CYCGRG 1 cut(s) 1208
BmgT120I GGNCC 6 cut(s) 9, 232, 391, 1009, 1280, 1509
BmiI GGNNCC 3 cut(s) 334, 899, 1442
BmrFI CCNGG 7 cut(s) 728, 1048, 1194, 1288, 1490, 1568, 1590
BmrI ACTGGG 2 cut(s) 780, 1710
BmuI ACTGGG 2 cut(s) 780, 1710
BpiI GAAGAC 1 cut(s) 70
Bpu10I CCTNAGC 1 cut(s) 681
Bpu14I TTCGAA 1 cut(s) 1223
BpuMI CCSGG 2 cut(s) 728, 1288
BsaAI YACGTR 1 cut(s) 262
BsaHI GRCGYC 2 cut(s) 116, 775
BsaI GGTCTC 2 cut(s) 54, 1493
BsaJI CCNNGG 6 cut(s) 515, 1052, 1157, 1567, 1589, 1712
BsaWI WCCGGW 4 cut(s) 207, 282, 318, 393
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 241, 733, 1053, 1310, 1495, 1595
Bse118I RCCGGY 4 cut(s) 223, 282, 361, 1335
Bse1I ACTGG 5 cut(s) 128, 775, 1208, 1660, 1705
Bse3DI GCAATG 2 cut(s) 1394, 1461
BseBI CCWGG 5 cut(s) 1048, 1194, 1490, 1568, 1590
BseDI CCNNGG 6 cut(s) 515, 1052, 1157, 1567, 1589, 1712
BseGI GGATG 4 cut(s) 304, 850, 1144, 1300
BseLI CCNNNNNNNGG 7 cut(s) 184, 241, 733, 1053, 1310, 1495, 1595
BseMI GCAATG 2 cut(s) 1394, 1461
BseMII CTCAG 6 cut(s) 9, 695, 928, 1079, 1247, 1415
BseNI ACTGG 5 cut(s) 128, 775, 1208, 1660, 1705
BseRI GAGGAG 3 cut(s) 133, 157, 466
BseSI GKGCMC 1 cut(s) 1413
BseX3I CGGCCG 2 cut(s) 100, 438
BseXI GCAGC 5 cut(s) 252, 402, 487, 689, 772
Bsh1236I CGCG 3 cut(s) 43, 275, 459
Bsh1285I CGRYCG 2 cut(s) 103, 441
BshNI GGYRCC 1 cut(s) 1440
BshTI ACCGGT 1 cut(s) 282
BsiEI CGRYCG 2 cut(s) 103, 441
BsiHKAI GWGCWC 2 cut(s) 1413, 1588
BsiHKCI CYCGRG 1 cut(s) 1208
BslFI GGGAC 1 cut(s) 1664
BslI CCNNNNNNNGG 7 cut(s) 184, 241, 733, 1053, 1310, 1495, 1595
BsmAI GTCTC 3 cut(s) 54, 1165, 1493
BsmBI CGTCTC 1 cut(s) 1165
BsmFI GGGAC 1 cut(s) 1664
Bso31I GGTCTC 2 cut(s) 54, 1493
BsoBI CYCGRG 1 cut(s) 1208
Bsp119I TTCGAA 1 cut(s) 1223
Bsp1286I GDGCHC 3 cut(s) 1413, 1588, 1726
Bsp143I GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
Bsp19I CCATGG 2 cut(s) 1052, 1712
BspCNI CTCAG 6 cut(s) 10, 694, 927, 1078, 1248, 1416
BspFNI CGCG 3 cut(s) 43, 275, 459
BspLI GGNNCC 3 cut(s) 334, 899, 1442
BspMAI CTGCAG 1 cut(s) 790
BspMI ACCTGC 1 cut(s) 632
BspPI GGATC 2 cut(s) 932, 1064
BspT104I TTCGAA 1 cut(s) 1223
BspT107I GGYRCC 1 cut(s) 1440
BspTNI GGTCTC 2 cut(s) 54, 1493
BsrBI CCGCTC 1 cut(s) 955
BsrDI GCAATG 2 cut(s) 1394, 1461
BsrFI RCCGGY 4 cut(s) 223, 282, 361, 1335
BsrI ACTGG 5 cut(s) 128, 775, 1208, 1660, 1705
BssAI RCCGGY 4 cut(s) 223, 282, 361, 1335
BssECI CCNNGG 6 cut(s) 515, 1052, 1157, 1567, 1589, 1712
BssMI GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
BssNI GRCGYC 2 cut(s) 116, 775
BssT1I CCWWGG 4 cut(s) 515, 1052, 1157, 1712
Bst2UI CCWGG 5 cut(s) 1048, 1194, 1490, 1568, 1590
Bst6I CTCTTC 1 cut(s) 807
BstACI GRCGYC 2 cut(s) 116, 775
BstBAI YACGTR 1 cut(s) 262
BstBI TTCGAA 1 cut(s) 1223
BstC8I GCNNGC 2 cut(s) 225, 883
BstDEI CTNAG 7 cut(s) 18, 587, 681, 914, 1065, 1256, 1424
BstDSI CCRYGG 2 cut(s) 1052, 1712
BstENI CCTNNNNNAGG 1 cut(s) 1593
BstF5I GGATG 4 cut(s) 304, 850, 1144, 1300
BstFNI CGCG 3 cut(s) 43, 275, 459
BstHHI GCGC 2 cut(s) 459, 913
BstKTI GATC 7 cut(s) 241, 259, 927, 1059, 1298, 1561, 1693
BstMAI GTCTC 3 cut(s) 54, 1165, 1493
BstMBI GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
BstMCI CGRYCG 2 cut(s) 103, 441
BstMWI GCNNNNNNNGC 8 cut(s) 412, 506, 674, 1048, 1097, 1194, 1213, 1685
BstNI CCWGG 5 cut(s) 1048, 1194, 1490, 1568, 1590
BstSCI CCNGG 7 cut(s) 726, 1046, 1192, 1286, 1488, 1566, 1588
BstSFI CTRYAG 1 cut(s) 786
BstSLI GKGCMC 1 cut(s) 1413
BstUI CGCG 3 cut(s) 43, 275, 459
BstV1I GCAGC 5 cut(s) 252, 402, 487, 689, 772
BstV2I GAAGAC 1 cut(s) 70
BstXI CCANNNNNNTGG 1 cut(s) 1277
BstZI CGGCCG 2 cut(s) 100, 438
BtgI CCRYGG 2 cut(s) 1052, 1712
BtgZI GCGATG 1 cut(s) 256
BtsCI GGATG 4 cut(s) 304, 850, 1144, 1300
BtsI GCAGTG 2 cut(s) 171, 1706
BtsIMutI CAGTG 5 cut(s) 171, 768, 922, 1653, 1706
BveI ACCTGC 1 cut(s) 632
Cac8I GCNNGC 2 cut(s) 225, 883
CfoI GCGC 2 cut(s) 459, 913
Cfr10I RCCGGY 4 cut(s) 223, 282, 361, 1335
Cfr13I GGNCC 6 cut(s) 9, 232, 391, 1009, 1280, 1509
CseI GACGC 2 cut(s) 105, 764
CsiI ACCWGGT 1 cut(s) 1488
Csp6I GTAC 4 cut(s) 931, 1113, 1327, 1486
CspAI ACCGGT 1 cut(s) 282
CviAII CATG 7 cut(s) 470, 794, 869, 928, 935, 1053, 1713
CviQI GTAC 4 cut(s) 931, 1113, 1327, 1486
DdeI CTNAG 7 cut(s) 18, 587, 681, 914, 1065, 1256, 1424
DpnI GATC 7 cut(s) 240, 258, 926, 1058, 1297, 1560, 1692
DpnII GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
EaeI YGGCCR 6 cut(s) 100, 125, 276, 438, 813, 1049
EagI CGGCCG 2 cut(s) 100, 438
Eam1104I CTCTTC 1 cut(s) 807
EarI CTCTTC 1 cut(s) 807
EclXI CGGCCG 2 cut(s) 100, 438
Eco130I CCWWGG 4 cut(s) 515, 1052, 1157, 1712
Eco24I GRGCYC 1 cut(s) 1726
Eco31I GGTCTC 2 cut(s) 54, 1493
Eco47I GGWCC 5 cut(s) 9, 232, 391, 1009, 1280
Eco52I CGGCCG 2 cut(s) 100, 438
Eco57I CTGAAG 2 cut(s) 91, 1489
Eco72I CACGTG 1 cut(s) 262
Eco88I CYCGRG 1 cut(s) 1208
EcoNI CCTNNNNNAGG 1 cut(s) 1593
EcoRII CCWGG 5 cut(s) 1046, 1192, 1488, 1566, 1588
EcoT14I CCWWGG 4 cut(s) 515, 1052, 1157, 1712
EcoT38I GRGCYC 1 cut(s) 1726
ErhI CCWWGG 4 cut(s) 515, 1052, 1157, 1712
Esp3I CGTCTC 1 cut(s) 1165
FaeI CATG 7 cut(s) 473, 797, 872, 931, 938, 1056, 1716
FalI AAGNNNNNCTT 2 cut(s) 17, 49
FaqI GGGAC 1 cut(s) 1664
FatI CATG 7 cut(s) 469, 793, 868, 927, 934, 1052, 1712
FauNDI CATATG 1 cut(s) 1537
FbaI TGATCA 1 cut(s) 1690
FblI GTMKAC 1 cut(s) 371
FokI GGATG 4 cut(s) 311, 857, 1151, 1287
FriOI GRGCYC 1 cut(s) 1726
FspBI CTAG 2 cut(s) 1038, 1158
GlaI GCGC 2 cut(s) 458, 912
HgaI GACGC 2 cut(s) 105, 764
HhaI GCGC 2 cut(s) 459, 913
Hin1I GRCGYC 2 cut(s) 116, 775
Hin1II CATG 7 cut(s) 473, 797, 872, 931, 938, 1056, 1716
Hin6I GCGC 2 cut(s) 457, 911
HinP1I GCGC 2 cut(s) 457, 911
HincII GTYRAC 1 cut(s) 372
HindII GTYRAC 1 cut(s) 372
HinfI GANTC 9 cut(s) 194, 215, 583, 618, 799, 948, 1016, 1063, 1635
HphI GGTGA 4 cut(s) 127, 197, 613, 1480
Hpy166II GTNNAC 6 cut(s) 316, 372, 532, 657, 1329, 1411
Hpy188I TCNGA 7 cut(s) 19, 110, 337, 607, 780, 1242, 1373
Hpy188III TCNNGA 9 cut(s) 191, 254, 424, 634, 683, 1060, 1067, 1168, 1210
Hpy8I GTNNAC 6 cut(s) 316, 372, 532, 657, 1329, 1411
Hpy99I CGWCG 7 cut(s) 43, 121, 376, 439, 446, 499, 1246
HpyAV CCTTC 9 cut(s) 79, 92, 223, 638, 816, 1451, 1513, 1518, 1570
HpyCH4IV ACGT 3 cut(s) 261, 1174, 1449
HpyCH4V TGCA 5 cut(s) 788, 885, 1250, 1342, 1411
HpyF10VI GCNNNNNNNGC 8 cut(s) 412, 506, 674, 1048, 1097, 1194, 1213, 1685
HpyF3I CTNAG 7 cut(s) 18, 587, 681, 914, 1065, 1256, 1424
HpySE526I ACGT 3 cut(s) 261, 1174, 1449
Hsp92I GRCGYC 2 cut(s) 116, 775
Hsp92II CATG 7 cut(s) 473, 797, 872, 931, 938, 1056, 1716
HspAI GCGC 2 cut(s) 457, 911
KroI GCCGGC 1 cut(s) 223
KroNI GCCGGC 1 cut(s) 225
Ksp22I TGATCA 1 cut(s) 1690
Kzo9I GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
LmnI GCTCC 1 cut(s) 338
Lsp1109I GCAGC 5 cut(s) 252, 402, 487, 689, 772
MabI ACCWGGT 1 cut(s) 1488
MaeI CTAG 2 cut(s) 1038, 1158
MaeII ACGT 3 cut(s) 261, 1174, 1449
MaeIII GTNAC 7 cut(s) 670, 751, 796, 1033, 1315, 1390, 1704
MalI GATC 7 cut(s) 240, 258, 926, 1058, 1297, 1560, 1692
MbiI CCGCTC 1 cut(s) 955
MboI GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
MfeI CAATTG 2 cut(s) 756, 1365
MhlI GDGCHC 3 cut(s) 1413, 1588, 1726
MlsI TGGCCA 2 cut(s) 815, 1051
MluCI AATT 6 cut(s) 756, 826, 838, 1225, 1365, 1621
MluNI TGGCCA 2 cut(s) 815, 1051
MlyI GAGTC 6 cut(s) 188, 209, 612, 793, 957, 1057
MmeI TCCRAC 3 cut(s) 285, 630, 1265
Mox20I TGGCCA 2 cut(s) 815, 1051
MreI CGCCGGCG 1 cut(s) 223
MroNI GCCGGC 1 cut(s) 223
MscI TGGCCA 2 cut(s) 815, 1051
MseI TTAA 6 cut(s) 327, 357, 489, 573, 1631, 1662
MslI CAYNNNNRTG 2 cut(s) 1466, 1711
Msp20I TGGCCA 2 cut(s) 815, 1051
MspA1I CMGCKG 1 cut(s) 415
MspR9I CCNGG 7 cut(s) 728, 1048, 1194, 1288, 1490, 1568, 1590
MunI CAATTG 2 cut(s) 756, 1365
MvaI CCWGG 5 cut(s) 1048, 1194, 1490, 1568, 1590
MvnI CGCG 3 cut(s) 43, 275, 459
MwoI GCNNNNNNNGC 8 cut(s) 412, 506, 674, 1048, 1097, 1194, 1213, 1685
NaeI GCCGGC 1 cut(s) 225
NciI CCSGG 2 cut(s) 728, 1288
NcoI CCATGG 2 cut(s) 1052, 1712
NdeI CATATG 1 cut(s) 1537
NdeII GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
NgoMIV GCCGGC 1 cut(s) 223
NlaIII CATG 7 cut(s) 473, 797, 872, 931, 938, 1056, 1716
NlaIV GGNNCC 3 cut(s) 334, 899, 1442
NmuCI GTSAC 5 cut(s) 751, 796, 1033, 1315, 1704
NspV TTCGAA 1 cut(s) 1223
PaqCI CACCTGC 1 cut(s) 632
PcsI WCGNNNNNNNCGW 3 cut(s) 224, 351, 639
PdiI GCCGGC 1 cut(s) 225
PfeI GAWTC 3 cut(s) 583, 1016, 1635
PflFI GACNNNGTC 1 cut(s) 1702
PinAI ACCGGT 1 cut(s) 282
PleI GAGTC 6 cut(s) 188, 209, 612, 793, 956, 1057
PmaCI CACGTG 1 cut(s) 262
PmlI CACGTG 1 cut(s) 262
PpsI GAGTC 6 cut(s) 188, 209, 612, 793, 956, 1057
Ppu21I YACGTR 1 cut(s) 262
Psp6I CCWGG 5 cut(s) 1046, 1192, 1488, 1566, 1588
PspCI CACGTG 1 cut(s) 262
PspGI CCWGG 5 cut(s) 1046, 1192, 1488, 1566, 1588
PspN4I GGNNCC 3 cut(s) 334, 899, 1442
PspPI GGNCC 6 cut(s) 9, 232, 391, 1009, 1280, 1509
PstI CTGCAG 1 cut(s) 790
PsyI GACNNNGTC 1 cut(s) 1702
RsaI GTAC 4 cut(s) 932, 1114, 1328, 1487
RsaNI GTAC 4 cut(s) 931, 1113, 1327, 1486
RseI CAYNNNNRTG 2 cut(s) 1466, 1711
SalI GTCGAC 1 cut(s) 370
SaqAI TTAA 6 cut(s) 327, 357, 489, 573, 1631, 1662
Sau3AI GATC 7 cut(s) 238, 256, 924, 1056, 1295, 1558, 1690
Sau96I GGNCC 6 cut(s) 9, 232, 391, 1009, 1280, 1509
SchI GAGTC 6 cut(s) 188, 209, 612, 793, 957, 1057
ScrFI CCNGG 7 cut(s) 728, 1048, 1194, 1288, 1490, 1568, 1590
SduI GDGCHC 3 cut(s) 1413, 1588, 1726
SexAI ACCWGGT 1 cut(s) 1488
SfcI CTRYAG 1 cut(s) 786
SfuI TTCGAA 1 cut(s) 1223
SgrAI CRCCGGYG 1 cut(s) 223
SinI GGWCC 5 cut(s) 9, 232, 391, 1009, 1280
SmiMI CAYNNNNRTG 2 cut(s) 1466, 1711
Sse9I AATT 6 cut(s) 756, 826, 838, 1225, 1365, 1621
SspMI CTAG 2 cut(s) 1038, 1158
StyD4I CCNGG 7 cut(s) 726, 1046, 1192, 1286, 1488, 1566, 1588
StyI CCWWGG 4 cut(s) 515, 1052, 1157, 1712
TaiI ACGT 3 cut(s) 264, 1177, 1452
TasI AATT 6 cut(s) 756, 826, 838, 1225, 1365, 1621
TatI WGTACW 1 cut(s) 1112
TauI GCSGC 8 cut(s) 105, 223, 278, 295, 462, 465, 506, 509
TfiI GAWTC 3 cut(s) 583, 1016, 1635
Tru1I TTAA 6 cut(s) 327, 357, 489, 573, 1631, 1662
Tru9I TTAA 6 cut(s) 327, 357, 489, 573, 1631, 1662
TscAI CASTG 5 cut(s) 178, 775, 922, 1660, 1713
TseFI GTSAC 5 cut(s) 751, 796, 1033, 1315, 1704
TseI GCWGC 5 cut(s) 265, 415, 500, 677, 785
Tsp45I GTSAC 5 cut(s) 751, 796, 1033, 1315, 1704
TspDTI ATGAA 1 cut(s) 952
TspGWI ACGGA 2 cut(s) 389, 1272
TspRI CASTG 5 cut(s) 178, 775, 922, 1660, 1713
Tth111I GACNNNGTC 1 cut(s) 1702
VneI GTGCAC 1 cut(s) 1409
VpaK11BI GGWCC 5 cut(s) 9, 232, 391, 1009, 1280
XagI CCTNNNNNAGG 1 cut(s) 1593
XapI RAATTY 1 cut(s) 1225
XcmI CCANNNNNNNNNTGG 1 cut(s) 941
XmaJI CCTAGG 1 cut(s) 1157
XmiI GTMKAC 1 cut(s) 371
XspI CTAG 2 cut(s) 1038, 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.