RLG00000005785

UPF0392 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0014925
Physical Location & Seq
Reverse (-)
1699406 .. 1701175
1770 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005785

Sequence Viewer

Length: 1536 bp
ATGGATTCCGAGCAGCGCCGCAAGCGGAAGAGAATGGGCCGGTCCTACTCGGAGGCCAAGCACTACTTGTCGTCGCGGAGGTCTCTCTTTCTCTGCTTCTCCTTCTTCATCTTCCTTCTTTTCTTGTCCTCCGGCCGCTTCAGAACGGCGTCGTTTCGGCCAGTCATCACCGCCTCCTCCACCACTCTCTATCTCATCTCCTCCACTGCCCACAACTCGGTTCTTGACTCGGTTGCTCACCGGAACGACTCGCTTCCGGCGAAGGTCCAAGATCGGGTCTTGTTTCCCGATCACGTGCTGCTTATCGCGGCCAACCGGTTTCAGCCGCAGGATGAGTTGGACTGCGTTTACCGGAGATTTAACGGCTCCGATGAGGGGTTGAAGCTTAGACCGCACAGAAAGTCCGACCCGACCCGACTCACCTGCCATTTCGAGATGGGCGAAGGGTTTGAGTTCACCACCGAAGCCGTTACGGCAGCTCAGGAAGTTGTGAGGTGTTTGTTGCCAGAGAGCATTAGCAACGACCCAGATAAGGCTTCGGGTATTCGGGTCACAATTGGGTACAACACTGGGCGTCCGAGAGCTCCAGTCCATGTGACGCTTCCTTCTGTGGCCACAATCCACAATTCAAAGCCCAATTTGGATGAGGCCACTAAGAAGAAGAAGCATGAGCTTTGTGCTTGCACTATGTTGTGGAACCAAGCCCCCGCGCTCAGTGAGTGGATCATGTACCATGCCTGGCTTGGAGTCGAGCGGTGGTTCATTTACGACAACAATAGTGATGATGGGATTGAAGATGTGGTTTTGGACCTCGATTCGCAGGGCTACAATGTCAGTAGGCAGTCCTGGCCATGGATCAAGACTCAGGAAGCAGGGTTTTCGCATTGTGCTTTGAAAGCGAGAGAGGAATGTACTTGGGTTGGTTTCTTTGATGTGGATGAGTTCTTCTACTTCCCTAGGGAGTTCAGGAGACGTAGAAGAGATGGCATTCCTGGCGAAAACTCACTCGGGAAGCTGGTTTCAAATTTTTCAAACTCTCCGACGATTGCAGAGCTGAGAACTGATTGCCATAGTTTTGGTCCGTCCGGGTTGAGATCACATCCATCACGGGGAGTGACCACAGGGTACACTTGCCGGTTGCAAAGCCCCGAAAGGCACAAGTCAATTGTCCGAACAGATTTGCTTGATGTTACGTTGCTCAATGTGGTGCACCATTTCAGGCTGAGAGAGGGTTTTAGGCACCTGAACGTGCCGGAAGGCATTGCGGTGATAAACCACTACAAGTACCAGGTTTGGGAGACCTTCAGGGCCAAGTTTTACAGAAGGGTTGCTACATATGTTGTGGATTGGCAGGAAGATCAAAACCAGGGGTCGAAGGATAGAGCACCTGGGTTAGGAACAGAGGCCATTGAACCGCCGAATTGGAGGTTAAGATTCTGTGAGGTTTGGGACACTGGCCTTAAATACTTTGTTTTGGCTTACTTTGCTGATCATTCGACTGGGTCCCTGCCATGGGAGAGGGCTCAACATCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

512

Amino Acids

58.93

Weight (kDa)

8.76

Isoelectric Point (pI)

53.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 222 - 455 1.9e-36 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 233 - 320 8.8e-13 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27200
fragaria_vesca FvH4_4g35330
malus_domestica MD16G1083500.v1.1
prunus_persica Prupe.1G262500_v2.0.a1
pyrus_communis pycom13g07280 pycom16g07240
rosa_chinensis RchiOBHm_Chr4g0444941
rosa_laevigata RLG00000005785
rosa_multiflora Rmu_sc0011561.1_g000002 Rmu_sc0038487.1_g000001
rosa_roxburghii Rroxscaffold_5G00385430
rosa_rugosa Rorug04G0356500
rosa_samantha Rh4BG429800 Rh4CG444700 Rh4DG425900
rosa_wichuraiana Rw4G035840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 431
Acc36I ACCTGC 1 cut(s) 431
AccB1I GGYRCC 1 cut(s) 1239
AccBSI CCGCTC 1 cut(s) 754
AccII CGCG 3 cut(s) 76, 308, 710
AclWI GGATC 2 cut(s) 731, 863
AcoI YGGCCR 5 cut(s) 133, 158, 309, 612, 848
AcsI RAATTY 1 cut(s) 1024
AcuI CTGAAG 2 cut(s) 124, 1288
AcvI CACGTG 1 cut(s) 295
AcyI GRCGYC 2 cut(s) 149, 574
AfaI GTAC 5 cut(s) 563, 731, 913, 1127, 1286
AgeI ACCGGT 1 cut(s) 315
AgsI TTSAA 7 cut(s) 382, 630, 794, 895, 1023, 1032, 1412
AjnI CCWGG 6 cut(s) 737, 845, 991, 1287, 1365, 1387
AluBI AGCT 6 cut(s) 385, 479, 584, 673, 1015, 1054
AluI AGCT 6 cut(s) 385, 479, 584, 673, 1015, 1054
Alw21I GWGCWC 3 cut(s) 586, 1212, 1387
Alw26I GTCTC 3 cut(s) 87, 964, 1292
Alw44I GTGCAC 1 cut(s) 1208
AlwI GGATC 2 cut(s) 731, 863
Ama87I CYCGRG 1 cut(s) 1007
ApaLI GTGCAC 1 cut(s) 1208
ApeKI GCWGC 3 cut(s) 13, 298, 476
ApoI RAATTY 1 cut(s) 1024
AsiGI ACCGGT 1 cut(s) 315
AspA2I CCTAGG 1 cut(s) 956
AspLEI GCGC 2 cut(s) 18, 712
AspS9I GGNCC 7 cut(s) 37, 42, 265, 808, 1079, 1308, 1503
AsuC2I CCSGG 1 cut(s) 1087
AsuHPI GGTGA 5 cut(s) 160, 230, 412, 448, 1279
AvaI CYCGRG 1 cut(s) 1007
AvaII GGWCC 5 cut(s) 42, 265, 808, 1079, 1503
AvrII CCTAGG 1 cut(s) 956
BaeGI GKGCMC 1 cut(s) 1212
BalI TGGCCA 2 cut(s) 614, 850
BanI GGYRCC 1 cut(s) 1239
BanII GRGCYC 2 cut(s) 586, 1525
BarI GAAGNNNNNNTAC 2 cut(s) 1315, 1347
BbrPI CACGTG 1 cut(s) 295
Bbv12I GWGCWC 3 cut(s) 586, 1212, 1387
BbvI GCAGC 3 cut(s) 25, 285, 488
BccI CCATC 4 cut(s) 430, 779, 977, 1111
BceAI ACGGC 4 cut(s) 162, 379, 452, 489
BcgI CGANNNNNNTGC 4 cut(s) 405, 439, 861, 895
BciT130I CCWGG 6 cut(s) 739, 847, 993, 1289, 1367, 1389
BclI TGATCA 1 cut(s) 1489
BcnI CCSGG 1 cut(s) 1087
BcoDI GTCTC 3 cut(s) 87, 964, 1292
BfaI CTAG 1 cut(s) 957
BfoI RGCGCY 1 cut(s) 19
BfuAI ACCTGC 1 cut(s) 431
BglI GCCNNNNNGGC 1 cut(s) 473
BisI GCNGC 7 cut(s) 14, 19, 136, 299, 309, 326, 477
BlnI CCTAGG 1 cut(s) 956
BlsI GCNGC 7 cut(s) 15, 20, 137, 300, 310, 327, 478
Bme1390I CCNGG 7 cut(s) 739, 847, 993, 1087, 1289, 1367, 1389
Bme18I GGWCC 5 cut(s) 42, 265, 808, 1079, 1503
BmeT110I CYCGRG 1 cut(s) 1007
BmgT120I GGNCC 7 cut(s) 37, 42, 265, 808, 1079, 1308, 1503
BmiI GGNNCC 5 cut(s) 367, 698, 1241, 1504, 1505
BmrFI CCNGG 7 cut(s) 739, 847, 993, 1087, 1289, 1367, 1389
BmrI ACTGGG 2 cut(s) 579, 1509
BmuI ACTGGG 2 cut(s) 579, 1509
BpmI CTGGAG 1 cut(s) 570
Bpu10I CCTNAGC 1 cut(s) 480
BpuMI CCSGG 1 cut(s) 1087
BsaAI YACGTR 1 cut(s) 295
BsaHI GRCGYC 2 cut(s) 149, 574
BsaI GGTCTC 2 cut(s) 87, 1292
BsaJI CCNNGG 5 cut(s) 851, 956, 1366, 1388, 1511
BsaWI WCCGGW 3 cut(s) 240, 315, 351
Bse118I RCCGGY 3 cut(s) 39, 315, 1134
Bse1I ACTGG 5 cut(s) 161, 574, 587, 1459, 1504
Bse3DI GCAATG 1 cut(s) 1260
BseBI CCWGG 6 cut(s) 739, 847, 993, 1289, 1367, 1389
BseDI CCNNGG 5 cut(s) 851, 956, 1366, 1388, 1511
BseGI GGATG 4 cut(s) 337, 649, 943, 1099
BseMI GCAATG 1 cut(s) 1260
BseMII CTCAG 5 cut(s) 494, 727, 878, 1046, 1214
BseNI ACTGG 5 cut(s) 161, 574, 587, 1459, 1504
BseRI GAGGAG 2 cut(s) 166, 190
BseSI GKGCMC 1 cut(s) 1212
BseX3I CGGCCG 1 cut(s) 133
BseXI GCAGC 3 cut(s) 25, 285, 488
Bsh1236I CGCG 3 cut(s) 76, 308, 710
Bsh1285I CGRYCG 1 cut(s) 136
BshNI GGYRCC 1 cut(s) 1239
BshTI ACCGGT 1 cut(s) 315
BsiEI CGRYCG 1 cut(s) 136
BsiHKAI GWGCWC 3 cut(s) 586, 1212, 1387
BsiHKCI CYCGRG 1 cut(s) 1007
BsiSI CCGG 9 cut(s) 40, 132, 241, 257, 316, 352, 1086, 1135, 1253
BslFI GGGAC 2 cut(s) 1463, 1489
BsmAI GTCTC 3 cut(s) 87, 964, 1292
BsmBI CGTCTC 1 cut(s) 964
BsmFI GGGAC 2 cut(s) 1463, 1489
BsmI GAATGC 1 cut(s) 987
Bso31I GGTCTC 2 cut(s) 87, 1292
BsoBI CYCGRG 1 cut(s) 1007
Bsp1286I GDGCHC 4 cut(s) 586, 1212, 1387, 1525
Bsp143I GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
Bsp19I CCATGG 2 cut(s) 851, 1511
BspCNI CTCAG 5 cut(s) 493, 726, 877, 1047, 1215
BspFNI CGCG 3 cut(s) 76, 308, 710
BspLI GGNNCC 5 cut(s) 367, 698, 1241, 1504, 1505
BspMI ACCTGC 1 cut(s) 431
BspPI GGATC 2 cut(s) 731, 863
BspT107I GGYRCC 1 cut(s) 1239
BspTNI GGTCTC 2 cut(s) 87, 1292
BsrBI CCGCTC 1 cut(s) 754
BsrDI GCAATG 1 cut(s) 1260
BsrFI RCCGGY 3 cut(s) 39, 315, 1134
BsrI ACTGG 5 cut(s) 161, 574, 587, 1459, 1504
BssAI RCCGGY 3 cut(s) 39, 315, 1134
BssECI CCNNGG 5 cut(s) 851, 956, 1366, 1388, 1511
BssMI GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
BssNI GRCGYC 2 cut(s) 149, 574
BssT1I CCWWGG 3 cut(s) 851, 956, 1511
Bst2UI CCWGG 6 cut(s) 739, 847, 993, 1289, 1367, 1389
Bst6I CTCTTC 2 cut(s) 23, 973
BstACI GRCGYC 2 cut(s) 149, 574
BstBAI YACGTR 1 cut(s) 295
BstC8I GCNNGC 2 cut(s) 23, 682
BstDEI CTNAG 7 cut(s) 386, 480, 654, 713, 864, 1055, 1223
BstDSI CCRYGG 2 cut(s) 851, 1511
BstENI CCTNNNNNAGG 1 cut(s) 1392
BstF5I GGATG 4 cut(s) 337, 649, 943, 1099
BstFNI CGCG 3 cut(s) 76, 308, 710
BstH2I RGCGCY 1 cut(s) 19
BstHHI GCGC 2 cut(s) 18, 712
BstKTI GATC 7 cut(s) 274, 292, 726, 858, 1097, 1360, 1492
BstMAI GTCTC 3 cut(s) 87, 964, 1292
BstMBI GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 7 cut(s) 22, 391, 473, 847, 896, 993, 1484
BstNI CCWGG 6 cut(s) 739, 847, 993, 1289, 1367, 1389
BstSCI CCNGG 7 cut(s) 737, 845, 991, 1085, 1287, 1365, 1387
BstSLI GKGCMC 1 cut(s) 1212
BstUI CGCG 3 cut(s) 76, 308, 710
BstV1I GCAGC 3 cut(s) 25, 285, 488
BstXI CCANNNNNNTGG 1 cut(s) 1076
BstZI CGGCCG 1 cut(s) 133
BtgI CCRYGG 2 cut(s) 851, 1511
BtsCI GGATG 4 cut(s) 337, 649, 943, 1099
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 4 cut(s) 204, 567, 721, 1452
BveI ACCTGC 1 cut(s) 431
Cac8I GCNNGC 2 cut(s) 23, 682
CfoI GCGC 2 cut(s) 18, 712
Cfr10I RCCGGY 3 cut(s) 39, 315, 1134
Cfr13I GGNCC 7 cut(s) 37, 42, 265, 808, 1079, 1308, 1503
CseI GACGC 3 cut(s) 138, 563, 607
CsiI ACCWGGT 1 cut(s) 1287
Csp6I GTAC 5 cut(s) 562, 730, 912, 1126, 1285
CspAI ACCGGT 1 cut(s) 315
CviAII CATG 6 cut(s) 593, 668, 727, 734, 852, 1512
CviQI GTAC 5 cut(s) 562, 730, 912, 1126, 1285
DdeI CTNAG 7 cut(s) 386, 480, 654, 713, 864, 1055, 1223
DpnI GATC 7 cut(s) 273, 291, 725, 857, 1096, 1359, 1491
DpnII GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
EaeI YGGCCR 5 cut(s) 133, 158, 309, 612, 848
EagI CGGCCG 1 cut(s) 133
Eam1104I CTCTTC 2 cut(s) 23, 973
EarI CTCTTC 2 cut(s) 23, 973
Ecl136II GAGCTC 1 cut(s) 584
EclXI CGGCCG 1 cut(s) 133
Eco130I CCWWGG 3 cut(s) 851, 956, 1511
Eco24I GRGCYC 2 cut(s) 586, 1525
Eco31I GGTCTC 2 cut(s) 87, 1292
Eco47I GGWCC 5 cut(s) 42, 265, 808, 1079, 1503
Eco52I CGGCCG 1 cut(s) 133
Eco53kI GAGCTC 1 cut(s) 584
Eco57I CTGAAG 2 cut(s) 124, 1288
Eco72I CACGTG 1 cut(s) 295
Eco88I CYCGRG 1 cut(s) 1007
EcoICRI GAGCTC 1 cut(s) 584
EcoNI CCTNNNNNAGG 1 cut(s) 1392
EcoO109I RGGNCCY 1 cut(s) 1503
EcoRII CCWGG 6 cut(s) 737, 845, 991, 1287, 1365, 1387
EcoT14I CCWWGG 3 cut(s) 851, 956, 1511
EcoT38I GRGCYC 2 cut(s) 586, 1525
ErhI CCWWGG 3 cut(s) 851, 956, 1511
Esp3I CGTCTC 1 cut(s) 964
FaeI CATG 6 cut(s) 596, 671, 730, 737, 855, 1515
FalI AAGNNNNNCTT 2 cut(s) 50, 82
FaqI GGGAC 2 cut(s) 1463, 1489
FatI CATG 6 cut(s) 592, 667, 726, 733, 851, 1511
FauI CCCGC 1 cut(s) 715
FauNDI CATATG 1 cut(s) 1336
FbaI TGATCA 1 cut(s) 1489
Fnu4HI GCNGC 7 cut(s) 14, 19, 136, 299, 309, 326, 477
FokI GGATG 4 cut(s) 344, 656, 950, 1086
FriOI GRGCYC 2 cut(s) 586, 1525
Fsp4HI GCNGC 7 cut(s) 14, 19, 136, 299, 309, 326, 477
FspBI CTAG 1 cut(s) 957
GlaI GCGC 2 cut(s) 17, 711
GluI GCNGC 7 cut(s) 14, 19, 136, 299, 309, 326, 477
GsuI CTGGAG 1 cut(s) 570
HaeII RGCGCY 1 cut(s) 19
HapII CCGG 9 cut(s) 40, 132, 241, 257, 316, 352, 1086, 1135, 1253
HgaI GACGC 3 cut(s) 138, 563, 607
HhaI GCGC 2 cut(s) 18, 712
Hin1I GRCGYC 2 cut(s) 149, 574
Hin1II CATG 6 cut(s) 596, 671, 730, 737, 855, 1515
Hin6I GCGC 2 cut(s) 16, 710
HinP1I GCGC 2 cut(s) 16, 710
HindIII AAGCTT 1 cut(s) 383
HinfI GANTC 8 cut(s) 5, 227, 248, 417, 747, 815, 862, 1434
HpaII CCGG 9 cut(s) 40, 132, 241, 257, 316, 352, 1086, 1135, 1253
HphI GGTGA 5 cut(s) 160, 230, 412, 448, 1279
Hpy166II GTNNAC 4 cut(s) 349, 456, 1128, 1210
Hpy188I TCNGA 8 cut(s) 10, 52, 143, 370, 406, 579, 1041, 1172
Hpy188III TCNNGA 8 cut(s) 224, 287, 433, 482, 859, 866, 967, 1009
Hpy8I GTNNAC 4 cut(s) 349, 456, 1128, 1210
Hpy99I CGWCG 3 cut(s) 76, 154, 1045
HpyAV CCTTC 9 cut(s) 112, 125, 256, 437, 615, 1250, 1312, 1317, 1369
HpyCH4IV ACGT 4 cut(s) 294, 973, 1193, 1248
HpyCH4V TGCA 4 cut(s) 684, 1049, 1141, 1210
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 391, 473, 847, 896, 993, 1484
HpyF3I CTNAG 7 cut(s) 386, 480, 654, 713, 864, 1055, 1223
HpySE526I ACGT 4 cut(s) 294, 973, 1193, 1248
Hsp92I GRCGYC 2 cut(s) 149, 574
Hsp92II CATG 6 cut(s) 596, 671, 730, 737, 855, 1515
HspAI GCGC 2 cut(s) 16, 710
KflI GGGWCCC 1 cut(s) 1503
Ksp22I TGATCA 1 cut(s) 1489
Kzo9I GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
LmnI GCTCC 2 cut(s) 371, 589
Lsp1109I GCAGC 3 cut(s) 25, 285, 488
MabI ACCWGGT 1 cut(s) 1287
MaeI CTAG 1 cut(s) 957
MaeII ACGT 4 cut(s) 294, 973, 1193, 1248
MaeIII GTNAC 5 cut(s) 469, 550, 595, 1114, 1189
MalI GATC 7 cut(s) 273, 291, 725, 857, 1096, 1359, 1491
MbiI CCGCTC 1 cut(s) 754
MboI GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
MboII GAAGA 9 cut(s) 40, 97, 103, 670, 673, 806, 937, 990, 1367
MfeI CAATTG 2 cut(s) 555, 1164
MhlI GDGCHC 4 cut(s) 586, 1212, 1387, 1525
MlsI TGGCCA 2 cut(s) 614, 850
MluCI AATT 6 cut(s) 555, 625, 637, 1024, 1164, 1420
MluNI TGGCCA 2 cut(s) 614, 850
MlyI GAGTC 5 cut(s) 221, 242, 411, 756, 856
MmeI TCCRAC 3 cut(s) 318, 429, 1064
Mox20I TGGCCA 2 cut(s) 614, 850
MscI TGGCCA 2 cut(s) 614, 850
MseI TTAA 3 cut(s) 360, 1430, 1461
MslI CAYNNNNRTG 1 cut(s) 1265
Msp20I TGGCCA 2 cut(s) 614, 850
MspI CCGG 9 cut(s) 40, 132, 241, 257, 316, 352, 1086, 1135, 1253
MspR9I CCNGG 7 cut(s) 739, 847, 993, 1087, 1289, 1367, 1389
MunI CAATTG 2 cut(s) 555, 1164
Mva1269I GAATGC 1 cut(s) 987
MvaI CCWGG 6 cut(s) 739, 847, 993, 1289, 1367, 1389
MvnI CGCG 3 cut(s) 76, 308, 710
MwoI GCNNNNNNNGC 7 cut(s) 22, 391, 473, 847, 896, 993, 1484
NciI CCSGG 1 cut(s) 1087
NcoI CCATGG 2 cut(s) 851, 1511
NdeI CATATG 1 cut(s) 1336
NdeII GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
NlaIII CATG 6 cut(s) 596, 671, 730, 737, 855, 1515
NlaIV GGNNCC 5 cut(s) 367, 698, 1241, 1504, 1505
NmuCI GTSAC 3 cut(s) 550, 595, 1114
PaqCI CACCTGC 1 cut(s) 431
PcsI WCGNNNNNNNCGW 2 cut(s) 257, 438
PctI GAATGC 1 cut(s) 987
PfeI GAWTC 3 cut(s) 5, 815, 1434
PflFI GACNNNGTC 1 cut(s) 1501
PinAI ACCGGT 1 cut(s) 315
PkrI GCNGC 7 cut(s) 15, 20, 137, 300, 310, 327, 478
PleI GAGTC 5 cut(s) 221, 242, 411, 755, 856
PmaCI CACGTG 1 cut(s) 295
PmlI CACGTG 1 cut(s) 295
PpsI GAGTC 5 cut(s) 221, 242, 411, 755, 856
Ppu21I YACGTR 1 cut(s) 295
PpuMI RGGWCCY 1 cut(s) 1503
Psp124BI GAGCTC 1 cut(s) 586
Psp5II RGGWCCY 1 cut(s) 1503
Psp6I CCWGG 6 cut(s) 737, 845, 991, 1287, 1365, 1387
PspCI CACGTG 1 cut(s) 295
PspGI CCWGG 6 cut(s) 737, 845, 991, 1287, 1365, 1387
PspN4I GGNNCC 5 cut(s) 367, 698, 1241, 1504, 1505
PspPI GGNCC 7 cut(s) 37, 42, 265, 808, 1079, 1308, 1503
PspPPI RGGWCCY 1 cut(s) 1503
PsyI GACNNNGTC 1 cut(s) 1501
RsaI GTAC 5 cut(s) 563, 731, 913, 1127, 1286
RsaNI GTAC 5 cut(s) 562, 730, 912, 1126, 1285
RseI CAYNNNNRTG 1 cut(s) 1265
SacI GAGCTC 1 cut(s) 586
SaqAI TTAA 3 cut(s) 360, 1430, 1461
SatI GCNGC 7 cut(s) 14, 19, 136, 299, 309, 326, 477
Sau3AI GATC 7 cut(s) 271, 289, 723, 855, 1094, 1357, 1489
Sau96I GGNCC 7 cut(s) 37, 42, 265, 808, 1079, 1308, 1503
SchI GAGTC 5 cut(s) 221, 242, 411, 756, 856
ScrFI CCNGG 7 cut(s) 739, 847, 993, 1087, 1289, 1367, 1389
SduI GDGCHC 4 cut(s) 586, 1212, 1387, 1525
SexAI ACCWGGT 1 cut(s) 1287
SinI GGWCC 5 cut(s) 42, 265, 808, 1079, 1503
SmiMI CAYNNNNRTG 1 cut(s) 1265
Sse9I AATT 6 cut(s) 555, 625, 637, 1024, 1164, 1420
SspMI CTAG 1 cut(s) 957
SstI GAGCTC 1 cut(s) 586
StyD4I CCNGG 7 cut(s) 737, 845, 991, 1085, 1287, 1365, 1387
StyI CCWWGG 3 cut(s) 851, 956, 1511
TaiI ACGT 4 cut(s) 297, 976, 1196, 1251
TaqI TCGA 5 cut(s) 432, 750, 813, 1373, 1496
TasI AATT 6 cut(s) 555, 625, 637, 1024, 1164, 1420
TatI WGTACW 1 cut(s) 911
TauI GCSGC 4 cut(s) 21, 138, 311, 328
TfiI GAWTC 3 cut(s) 5, 815, 1434
Tru1I TTAA 3 cut(s) 360, 1430, 1461
Tru9I TTAA 3 cut(s) 360, 1430, 1461
TscAI CASTG 4 cut(s) 211, 574, 721, 1459
TseFI GTSAC 3 cut(s) 550, 595, 1114
TseI GCWGC 3 cut(s) 13, 298, 476
Tsp45I GTSAC 3 cut(s) 550, 595, 1114
TspDTI ATGAA 2 cut(s) 97, 751
TspGWI ACGGA 1 cut(s) 1071
TspRI CASTG 4 cut(s) 211, 574, 721, 1459
Tth111I GACNNNGTC 1 cut(s) 1501
VneI GTGCAC 1 cut(s) 1208
VpaK11BI GGWCC 5 cut(s) 42, 265, 808, 1079, 1503
XagI CCTNNNNNAGG 1 cut(s) 1392
XapI RAATTY 1 cut(s) 1024
XcmI CCANNNNNNNNNTGG 1 cut(s) 740
XmaJI CCTAGG 1 cut(s) 956
XspI CTAG 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.