Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11920 |
| fragaria_vesca | FvH4_4g36430 |
| malus_domestica | MD13G1009300.v1.1 MD16G1007300.v1.1 |
| prunus_persica | Prupe.1G343400_v2.0.a1 |
| pyrus_communis | pycom13g00790 pycom16g00690 |
| rosa_chinensis | RchiOBHm_Chr4g0446191 |
| rosa_laevigata | RLG00000005684 |
| rosa_multiflora | Rmu_sc0009254.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00386580 |
| rosa_rugosa | Rorug04G0368300 |
| rosa_samantha | Rh4AG430300 Rh4BG439600 Rh4CG457000 Rh4DG438200 |
| rosa_wichuraiana | Rw4G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 703 |
| AatII | GACGTC | 2 cut(s) | 132, 177 |
| Acc36I | ACCTGC | 1 cut(s) | 1871 |
| AccB1I | GGYRCC | 3 cut(s) | 286, 712, 1272 |
| AccII | CGCG | 3 cut(s) | 292, 594, 836 |
| AccIII | TCCGGA | 2 cut(s) | 609, 1314 |
| AcoI | YGGCCR | 2 cut(s) | 1021, 1213 |
| AcsI | RAATTY | 4 cut(s) | 352, 763, 1310, 1327 |
| AcuI | CTGAAG | 1 cut(s) | 485 |
| AcvI | CACGTG | 1 cut(s) | 217 |
| AcyI | GRCGYC | 6 cut(s) | 129, 174, 287, 330, 1273, 1444 |
| AfaI | GTAC | 5 cut(s) | 155, 665, 1322, 1406, 1525 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 35, 61, 368, 673, 854, 1030, 1683 |
| AflIII | ACRYGT | 1 cut(s) | 660 |
| AgsI | TTSAA | 9 cut(s) | 418, 487, 622, 730, 802, 1103, 1337, 1364, 1399 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 403 |
| AjiI | CACGTC | 3 cut(s) | 661, 705, 1081 |
| AjnI | CCWGG | 1 cut(s) | 578 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1131, 1163 |
| Alw21I | GWGCWC | 1 cut(s) | 216 |
| Alw26I | GTCTC | 3 cut(s) | 521, 557, 1590 |
| Ama87I | CYCGRG | 4 cut(s) | 56, 158, 281, 869 |
| Aor13HI | TCCGGA | 2 cut(s) | 609, 1314 |
| AoxI | GGCC | 5 cut(s) | 295, 496, 559, 1021, 1213 |
| ApeKI | GCWGC | 5 cut(s) | 535, 670, 925, 1202, 1727 |
| ApoI | RAATTY | 4 cut(s) | 352, 763, 1310, 1327 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 422, 740, 971 |
| AspLEI | GCGC | 5 cut(s) | 289, 760, 838, 1275, 1592 |
| AspS9I | GGNCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| AsuC2I | CCSGG | 1 cut(s) | 383 |
| AsuNHI | GCTAGC | 1 cut(s) | 1384 |
| AvaI | CYCGRG | 4 cut(s) | 56, 158, 281, 869 |
| AvaII | GGWCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| BalI | TGGCCA | 1 cut(s) | 1215 |
| BamHI | GGATCC | 5 cut(s) | 4, 1172, 1539, 1851, 1867 |
| BanI | GGYRCC | 3 cut(s) | 286, 712, 1272 |
| BanII | GRGCYC | 1 cut(s) | 1194 |
| BbrPI | CACGTG | 1 cut(s) | 217 |
| Bbv12I | GWGCWC | 1 cut(s) | 216 |
| BbvCI | CCTCAGC | 2 cut(s) | 770, 920 |
| BbvI | GCAGC | 5 cut(s) | 547, 682, 912, 1214, 1739 |
| BccI | CCATC | 4 cut(s) | 982, 1100, 1535, 1901 |
| BceAI | ACGGC | 6 cut(s) | 181, 207, 212, 558, 590, 1008 |
| BciT130I | CCWGG | 1 cut(s) | 580 |
| BcnI | CCSGG | 1 cut(s) | 383 |
| BcoDI | GTCTC | 3 cut(s) | 521, 557, 1590 |
| BfaI | CTAG | 3 cut(s) | 1385, 1574, 1875 |
| BfmI | CTRYAG | 1 cut(s) | 1200 |
| BfoI | RGCGCY | 4 cut(s) | 290, 761, 1276, 1593 |
| BfuAI | ACCTGC | 1 cut(s) | 1871 |
| Bme1390I | CCNGG | 2 cut(s) | 383, 580 |
| Bme18I | GGWCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 403 |
| BmeT110I | CYCGRG | 4 cut(s) | 56, 158, 281, 869 |
| BmgBI | CACGTC | 3 cut(s) | 661, 705, 1081 |
| BmgT120I | GGNCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| BmiI | GGNNCC | 9 cut(s) | 6, 251, 288, 714, 1174, 1274, 1541, 1853, 1869 |
| BmrFI | CCNGG | 2 cut(s) | 383, 580 |
| BmtI | GCTAGC | 1 cut(s) | 1388 |
| BpmI | CTGGAG | 2 cut(s) | 562, 1614 |
| Bpu10I | CCTNAGC | 2 cut(s) | 770, 920 |
| BpuEI | CTTGAG | 3 cut(s) | 419, 1151, 1268 |
| BpuMI | CCSGG | 1 cut(s) | 383 |
| Bsa29I | ATCGAT | 1 cut(s) | 1123 |
| BsaAI | YACGTR | 1 cut(s) | 217 |
| BsaBI | GATNNNNATC | 2 cut(s) | 899, 956 |
| BsaHI | GRCGYC | 6 cut(s) | 129, 174, 287, 330, 1273, 1444 |
| BsaJI | CCNNGG | 4 cut(s) | 55, 282, 1168, 1413 |
| BsaWI | WCCGGW | 3 cut(s) | 83, 609, 1314 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 35, 61, 368, 673, 854, 1030, 1683 |
| Bse118I | RCCGGY | 3 cut(s) | 361, 698, 977 |
| Bse1I | ACTGG | 3 cut(s) | 1009, 1059, 1489 |
| Bse3DI | GCAATG | 1 cut(s) | 1663 |
| Bse8I | GATNNNNATC | 2 cut(s) | 899, 956 |
| BseAI | TCCGGA | 2 cut(s) | 609, 1314 |
| BseBI | CCWGG | 1 cut(s) | 580 |
| BseCI | ATCGAT | 1 cut(s) | 1123 |
| BseDI | CCNNGG | 4 cut(s) | 55, 282, 1168, 1413 |
| BseGI | GGATG | 1 cut(s) | 378 |
| BseJI | GATNNNNATC | 2 cut(s) | 899, 956 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 35, 61, 368, 673, 854, 1030, 1683 |
| BseMI | GCAATG | 1 cut(s) | 1663 |
| BseMII | CTCAG | 4 cut(s) | 626, 731, 761, 911 |
| BseNI | ACTGG | 3 cut(s) | 1009, 1059, 1489 |
| BseRI | GAGGAG | 5 cut(s) | 15, 18, 251, 303, 887 |
| BseX3I | CGGCCG | 1 cut(s) | 1021 |
| BseXI | GCAGC | 5 cut(s) | 547, 682, 912, 1214, 1739 |
| BsgI | GTGCAG | 2 cut(s) | 583, 1746 |
| Bsh1236I | CGCG | 3 cut(s) | 292, 594, 836 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1024 |
| BshFI | GGCC | 5 cut(s) | 297, 498, 561, 1023, 1215 |
| BshNI | GGYRCC | 3 cut(s) | 286, 712, 1272 |
| BshVI | ATCGAT | 1 cut(s) | 1123 |
| BsiEI | CGRYCG | 1 cut(s) | 1024 |
| BsiHKAI | GWGCWC | 1 cut(s) | 216 |
| BsiHKCI | CYCGRG | 4 cut(s) | 56, 158, 281, 869 |
| BslFI | GGGAC | 1 cut(s) | 1675 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 35, 61, 368, 673, 854, 1030, 1683 |
| BsmAI | GTCTC | 3 cut(s) | 521, 557, 1590 |
| BsmBI | CGTCTC | 1 cut(s) | 521 |
| BsmFI | GGGAC | 1 cut(s) | 1675 |
| BsnI | GGCC | 5 cut(s) | 297, 498, 561, 1023, 1215 |
| BsoBI | CYCGRG | 4 cut(s) | 56, 158, 281, 869 |
| Bsp1286I | GDGCHC | 2 cut(s) | 216, 1194 |
| Bsp13I | TCCGGA | 2 cut(s) | 609, 1314 |
| Bsp1407I | TGTACA | 1 cut(s) | 1404 |
| Bsp19I | CCATGG | 1 cut(s) | 1413 |
| BspANI | GGCC | 5 cut(s) | 297, 498, 561, 1023, 1215 |
| BspCNI | CTCAG | 4 cut(s) | 627, 730, 762, 912 |
| BspDI | ATCGAT | 1 cut(s) | 1123 |
| BspEI | TCCGGA | 2 cut(s) | 609, 1314 |
| BspFNI | CGCG | 3 cut(s) | 292, 594, 836 |
| BspLI | GGNNCC | 9 cut(s) | 6, 251, 288, 714, 1174, 1274, 1541, 1853, 1869 |
| BspMAI | CTGCAG | 1 cut(s) | 1204 |
| BspMI | ACCTGC | 1 cut(s) | 1871 |
| BspOI | GCTAGC | 1 cut(s) | 1388 |
| BspQI | GCTCTTC | 1 cut(s) | 515 |
| BspT107I | GGYRCC | 3 cut(s) | 286, 712, 1272 |
| BsrDI | GCAATG | 1 cut(s) | 1663 |
| BsrFI | RCCGGY | 3 cut(s) | 361, 698, 977 |
| BsrGI | TGTACA | 1 cut(s) | 1404 |
| BsrI | ACTGG | 3 cut(s) | 1009, 1059, 1489 |
| BssAI | RCCGGY | 3 cut(s) | 361, 698, 977 |
| BssECI | CCNNGG | 4 cut(s) | 55, 282, 1168, 1413 |
| BssNI | GRCGYC | 6 cut(s) | 129, 174, 287, 330, 1273, 1444 |
| BssT1I | CCWWGG | 1 cut(s) | 1413 |
| Bst2UI | CCWGG | 1 cut(s) | 580 |
| Bst4CI | ACNGT | 5 cut(s) | 505, 511, 941, 1304, 1783 |
| Bst6I | CTCTTC | 3 cut(s) | 198, 413, 515 |
| BstACI | GRCGYC | 6 cut(s) | 129, 174, 287, 330, 1273, 1444 |
| BstAUI | TGTACA | 1 cut(s) | 1404 |
| BstBAI | YACGTR | 1 cut(s) | 217 |
| BstC8I | GCNNGC | 8 cut(s) | 243, 264, 363, 840, 979, 1200, 1386, 1614 |
| BstDEI | CTNAG | 7 cut(s) | 635, 717, 770, 920, 1059, 1520, 1544 |
| BstDSI | CCRYGG | 1 cut(s) | 1413 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 59 |
| BstF5I | GGATG | 1 cut(s) | 378 |
| BstFNI | CGCG | 3 cut(s) | 292, 594, 836 |
| BstH2I | RGCGCY | 4 cut(s) | 290, 761, 1276, 1593 |
| BstHHI | GCGC | 5 cut(s) | 289, 760, 838, 1275, 1592 |
| BstMAI | GTCTC | 3 cut(s) | 521, 557, 1590 |
| BstMCI | CGRYCG | 1 cut(s) | 1024 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 268, 277, 286, 567, 597, 766, 844, 925, 978 |
| BstNI | CCWGG | 1 cut(s) | 580 |
| BstNSI | RCATGY | 2 cut(s) | 266, 1427 |
| BstSCI | CCNGG | 2 cut(s) | 381, 578 |
| BstSFI | CTRYAG | 1 cut(s) | 1200 |
| BstUI | CGCG | 3 cut(s) | 292, 594, 836 |
| BstV1I | GCAGC | 5 cut(s) | 547, 682, 912, 1214, 1739 |
| BstX2I | RGATCY | 6 cut(s) | 4, 1172, 1469, 1539, 1851, 1867 |
| BstYI | RGATCY | 6 cut(s) | 4, 1172, 1469, 1539, 1851, 1867 |
| BstZI | CGGCCG | 1 cut(s) | 1021 |
| Bsu15I | ATCGAT | 1 cut(s) | 1123 |
| BsuRI | GGCC | 5 cut(s) | 297, 498, 561, 1023, 1215 |
| BsuTUI | ATCGAT | 1 cut(s) | 1123 |
| BtgI | CCRYGG | 1 cut(s) | 1413 |
| BtrI | CACGTC | 3 cut(s) | 661, 705, 1081 |
| BtsCI | GGATG | 1 cut(s) | 378 |
| BtsIMutI | CAGTG | 3 cut(s) | 139, 510, 1309 |
| BveI | ACCTGC | 1 cut(s) | 1871 |
| Cac8I | GCNNGC | 8 cut(s) | 243, 264, 363, 840, 979, 1200, 1386, 1614 |
| CfoI | GCGC | 5 cut(s) | 289, 760, 838, 1275, 1592 |
| Cfr10I | RCCGGY | 3 cut(s) | 361, 698, 977 |
| Cfr13I | GGNCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| ClaI | ATCGAT | 1 cut(s) | 1123 |
| CseI | GACGC | 3 cut(s) | 338, 842, 1433 |
| Csp6I | GTAC | 5 cut(s) | 154, 664, 1321, 1405, 1524 |
| CviAII | CATG | 6 cut(s) | 263, 1136, 1234, 1414, 1424, 1951 |
| CviQI | GTAC | 5 cut(s) | 154, 664, 1321, 1405, 1524 |
| DdeI | CTNAG | 7 cut(s) | 635, 717, 770, 920, 1059, 1520, 1544 |
| DinI | GGCGCC | 2 cut(s) | 288, 1274 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 703 |
| DriI | GACNNNNNGTC | 1 cut(s) | 403 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 703 |
| EaeI | YGGCCR | 2 cut(s) | 1021, 1213 |
| EagI | CGGCCG | 1 cut(s) | 1021 |
| Eam1104I | CTCTTC | 3 cut(s) | 198, 413, 515 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 403 |
| EarI | CTCTTC | 3 cut(s) | 198, 413, 515 |
| EclXI | CGGCCG | 1 cut(s) | 1021 |
| Eco130I | CCWWGG | 1 cut(s) | 1413 |
| Eco24I | GRGCYC | 1 cut(s) | 1194 |
| Eco47I | GGWCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| Eco52I | CGGCCG | 1 cut(s) | 1021 |
| Eco57I | CTGAAG | 1 cut(s) | 485 |
| Eco72I | CACGTG | 1 cut(s) | 217 |
| Eco88I | CYCGRG | 4 cut(s) | 56, 158, 281, 869 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 59 |
| EcoO109I | RGGNCCY | 3 cut(s) | 250, 997, 1913 |
| EcoRI | GAATTC | 2 cut(s) | 763, 1310 |
| EcoRII | CCWGG | 1 cut(s) | 578 |
| EcoT14I | CCWWGG | 1 cut(s) | 1413 |
| EcoT38I | GRGCYC | 1 cut(s) | 1194 |
| EgeI | GGCGCC | 2 cut(s) | 288, 1274 |
| EheI | GGCGCC | 2 cut(s) | 288, 1274 |
| ErhI | CCWWGG | 1 cut(s) | 1413 |
| Esp3I | CGTCTC | 1 cut(s) | 521 |
| FaeI | CATG | 6 cut(s) | 266, 1139, 1237, 1417, 1427, 1954 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 956, 988, 1052, 1084 |
| FaqI | GGGAC | 1 cut(s) | 1675 |
| FatI | CATG | 6 cut(s) | 262, 1135, 1233, 1413, 1423, 1950 |
| FauI | CCCGC | 3 cut(s) | 666, 675, 847 |
| FokI | GGATG | 1 cut(s) | 365 |
| FriOI | GRGCYC | 1 cut(s) | 1194 |
| FspBI | CTAG | 3 cut(s) | 1385, 1574, 1875 |
| GlaI | GCGC | 5 cut(s) | 288, 759, 837, 1274, 1591 |
| GsuI | CTGGAG | 2 cut(s) | 562, 1614 |
| HaeII | RGCGCY | 4 cut(s) | 290, 761, 1276, 1593 |
| HaeIII | GGCC | 5 cut(s) | 297, 498, 561, 1023, 1215 |
| HgaI | GACGC | 3 cut(s) | 338, 842, 1433 |
| HhaI | GCGC | 5 cut(s) | 289, 760, 838, 1275, 1592 |
| Hin1I | GRCGYC | 6 cut(s) | 129, 174, 287, 330, 1273, 1444 |
| Hin1II | CATG | 6 cut(s) | 266, 1139, 1237, 1417, 1427, 1954 |
| Hin6I | GCGC | 5 cut(s) | 287, 758, 836, 1273, 1590 |
| HinP1I | GCGC | 5 cut(s) | 287, 758, 836, 1273, 1590 |
| Hpy166II | GTNNAC | 7 cut(s) | 658, 664, 853, 1028, 1354, 1448, 1765 |
| Hpy188I | TCNGA | 9 cut(s) | 211, 324, 340, 351, 465, 720, 945, 1169, 1264 |
| Hpy8I | GTNNAC | 7 cut(s) | 658, 664, 853, 1028, 1354, 1448, 1765 |
| HpyAV | CCTTC | 6 cut(s) | 308, 327, 616, 673, 796, 1399 |
| HpyCH4III | ACNGT | 5 cut(s) | 505, 511, 941, 1304, 1783 |
| HpyCH4IV | ACGT | 7 cut(s) | 129, 174, 216, 654, 660, 704, 1080 |
| HpyCH4V | TGCA | 6 cut(s) | 266, 600, 1202, 1427, 1656, 1727 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 268, 277, 286, 567, 597, 766, 844, 925, 978 |
| HpyF3I | CTNAG | 7 cut(s) | 635, 717, 770, 920, 1059, 1520, 1544 |
| HpySE526I | ACGT | 7 cut(s) | 129, 174, 216, 654, 660, 704, 1080 |
| Hsp92I | GRCGYC | 6 cut(s) | 129, 174, 287, 330, 1273, 1444 |
| Hsp92II | CATG | 6 cut(s) | 266, 1139, 1237, 1417, 1427, 1954 |
| HspAI | GCGC | 5 cut(s) | 287, 758, 836, 1273, 1590 |
| KasI | GGCGCC | 2 cut(s) | 286, 1272 |
| Kpn2I | TCCGGA | 2 cut(s) | 609, 1314 |
| KroI | GCCGGC | 2 cut(s) | 361, 977 |
| KroNI | GCCGGC | 2 cut(s) | 363, 979 |
| LguI | GCTCTTC | 1 cut(s) | 515 |
| LmnI | GCTCC | 6 cut(s) | 211, 238, 276, 532, 612, 682 |
| Lsp1109I | GCAGC | 5 cut(s) | 547, 682, 912, 1214, 1739 |
| MaeI | CTAG | 3 cut(s) | 1385, 1574, 1875 |
| MaeII | ACGT | 7 cut(s) | 129, 174, 216, 654, 660, 704, 1080 |
| MaeIII | GTNAC | 5 cut(s) | 99, 217, 229, 475, 505 |
| MfeI | CAATTG | 1 cut(s) | 586 |
| MflI | RGATCY | 6 cut(s) | 4, 1172, 1469, 1539, 1851, 1867 |
| MhlI | GDGCHC | 2 cut(s) | 216, 1194 |
| MlsI | TGGCCA | 1 cut(s) | 1215 |
| MluNI | TGGCCA | 1 cut(s) | 1215 |
| Mly113I | GGCGCC | 2 cut(s) | 287, 1273 |
| MlyI | GAGTC | 6 cut(s) | 107, 215, 299, 559, 1259, 1644 |
| MmeI | TCCRAC | 5 cut(s) | 189, 280, 993, 1480, 1895 |
| Mox20I | TGGCCA | 1 cut(s) | 1215 |
| MreI | CGCCGGCG | 1 cut(s) | 977 |
| MroI | TCCGGA | 2 cut(s) | 609, 1314 |
| MroNI | GCCGGC | 2 cut(s) | 361, 977 |
| MroXI | GAANNNNTTC | 3 cut(s) | 422, 740, 971 |
| MscI | TGGCCA | 1 cut(s) | 1215 |
| MseI | TTAA | 5 cut(s) | 51, 180, 356, 1718, 1743 |
| Msp20I | TGGCCA | 1 cut(s) | 1215 |
| MspA1I | CMGCKG | 2 cut(s) | 673, 780 |
| MspR9I | CCNGG | 2 cut(s) | 383, 580 |
| MunI | CAATTG | 1 cut(s) | 586 |
| MvaI | CCWGG | 1 cut(s) | 580 |
| MvnI | CGCG | 3 cut(s) | 292, 594, 836 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 268, 277, 286, 567, 597, 766, 844, 925, 978 |
| NaeI | GCCGGC | 2 cut(s) | 363, 979 |
| NarI | GGCGCC | 2 cut(s) | 287, 1273 |
| NciI | CCSGG | 1 cut(s) | 383 |
| NcoI | CCATGG | 1 cut(s) | 1413 |
| NgoMIV | GCCGGC | 2 cut(s) | 361, 977 |
| NheI | GCTAGC | 1 cut(s) | 1384 |
| NlaIII | CATG | 6 cut(s) | 266, 1139, 1237, 1417, 1427, 1954 |
| NlaIV | GGNNCC | 9 cut(s) | 6, 251, 288, 714, 1174, 1274, 1541, 1853, 1869 |
| NmeAIII | GCCGAG | 1 cut(s) | 495 |
| NmuCI | GTSAC | 4 cut(s) | 99, 217, 475, 505 |
| NspI | RCATGY | 2 cut(s) | 266, 1427 |
| PaeI | GCATGC | 1 cut(s) | 266 |
| PaeR7I | CTCGAG | 2 cut(s) | 158, 869 |
| PciSI | GCTCTTC | 1 cut(s) | 515 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 165, 171, 981 |
| PdiI | GCCGGC | 2 cut(s) | 363, 979 |
| PdmI | GAANNNNTTC | 3 cut(s) | 422, 740, 971 |
| PfeI | GAWTC | 5 cut(s) | 346, 639, 931, 1125, 1630 |
| PflFI | GACNNNGTC | 1 cut(s) | 173 |
| PfoI | TCCNGGA | 1 cut(s) | 381 |
| PleI | GAGTC | 6 cut(s) | 106, 214, 299, 558, 1258, 1644 |
| PluTI | GGCGCC | 2 cut(s) | 290, 1276 |
| PmaCI | CACGTG | 1 cut(s) | 217 |
| PmlI | CACGTG | 1 cut(s) | 217 |
| PpsI | GAGTC | 6 cut(s) | 106, 214, 299, 558, 1258, 1644 |
| Ppu21I | YACGTR | 1 cut(s) | 217 |
| PpuMI | RGGWCCY | 3 cut(s) | 250, 997, 1913 |
| Psp5II | RGGWCCY | 3 cut(s) | 250, 997, 1913 |
| Psp6I | CCWGG | 1 cut(s) | 578 |
| PspCI | CACGTG | 1 cut(s) | 217 |
| PspGI | CCWGG | 1 cut(s) | 578 |
| PspN4I | GGNNCC | 9 cut(s) | 6, 251, 288, 714, 1174, 1274, 1541, 1853, 1869 |
| PspPI | GGNCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| PspPPI | RGGWCCY | 3 cut(s) | 250, 997, 1913 |
| PstI | CTGCAG | 1 cut(s) | 1204 |
| PsuI | RGATCY | 6 cut(s) | 4, 1172, 1469, 1539, 1851, 1867 |
| PsyI | GACNNNGTC | 1 cut(s) | 173 |
| RsaI | GTAC | 5 cut(s) | 155, 665, 1322, 1406, 1525 |
| RsaNI | GTAC | 5 cut(s) | 154, 664, 1321, 1405, 1524 |
| SapI | GCTCTTC | 1 cut(s) | 515 |
| SaqAI | TTAA | 5 cut(s) | 51, 180, 356, 1718, 1743 |
| Sau96I | GGNCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| SchI | GAGTC | 6 cut(s) | 107, 215, 299, 559, 1259, 1644 |
| ScrFI | CCNGG | 2 cut(s) | 383, 580 |
| SduI | GDGCHC | 2 cut(s) | 216, 1194 |
| SfcI | CTRYAG | 1 cut(s) | 1200 |
| SfoI | GGCGCC | 2 cut(s) | 288, 1274 |
| Sfr274I | CTCGAG | 2 cut(s) | 158, 869 |
| SgrAI | CRCCGGYG | 1 cut(s) | 977 |
| SinI | GGWCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| SlaI | CTCGAG | 2 cut(s) | 158, 869 |
| SmlI | CTYRAG | 5 cut(s) | 158, 434, 869, 1130, 1247 |
| SmoI | CTYRAG | 5 cut(s) | 158, 434, 869, 1130, 1247 |
| SphI | GCATGC | 1 cut(s) | 266 |
| SspDI | GGCGCC | 2 cut(s) | 286, 1272 |
| SspMI | CTAG | 3 cut(s) | 1385, 1574, 1875 |
| StyD4I | CCNGG | 2 cut(s) | 381, 578 |
| StyI | CCWWGG | 1 cut(s) | 1413 |
| TaaI | ACNGT | 5 cut(s) | 505, 511, 941, 1304, 1783 |
| TaiI | ACGT | 7 cut(s) | 132, 177, 219, 657, 663, 707, 1083 |
| TaqI | TCGA | 9 cut(s) | 159, 690, 818, 870, 1123, 1461, 1530, 1707, 1812 |
| TatI | WGTACW | 1 cut(s) | 1404 |
| TauI | GCSGC | 8 cut(s) | 292, 335, 548, 594, 783, 984, 1023, 1605 |
| TfiI | GAWTC | 5 cut(s) | 346, 639, 931, 1125, 1630 |
| Tru1I | TTAA | 5 cut(s) | 51, 180, 356, 1718, 1743 |
| Tru9I | TTAA | 5 cut(s) | 51, 180, 356, 1718, 1743 |
| TscAI | CASTG | 3 cut(s) | 139, 510, 1309 |
| TseFI | GTSAC | 4 cut(s) | 99, 217, 475, 505 |
| TseI | GCWGC | 5 cut(s) | 535, 670, 925, 1202, 1727 |
| Tsp45I | GTSAC | 4 cut(s) | 99, 217, 475, 505 |
| TspDTI | ATGAA | 7 cut(s) | 33, 533, 962, 968, 1060, 1064, 1152 |
| TspGWI | ACGGA | 5 cut(s) | 248, 494, 545, 899, 1554 |
| TspRI | CASTG | 3 cut(s) | 139, 510, 1309 |
| Tth111I | GACNNNGTC | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 8 cut(s) | 250, 582, 696, 886, 937, 997, 1913, 1947 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 59 |
| XapI | RAATTY | 4 cut(s) | 352, 763, 1310, 1327 |
| XceI | RCATGY | 2 cut(s) | 266, 1427 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1496 |
| XhoI | CTCGAG | 2 cut(s) | 158, 869 |
| XmnI | GAANNNNTTC | 3 cut(s) | 422, 740, 971 |
| XspI | CTAG | 3 cut(s) | 1385, 1574, 1875 |
| ZraI | GACGTC | 2 cut(s) | 130, 175 |