RchiOBHm_Chr4g0446191

Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0014231
Physical Location & Seq
Forward (+)
66441827 .. 66447139
5313 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41371

Sequence Viewer

Length: 1989 bp
ATGGATCTCGGGGAGGTTACAATCACCAAAGCGACCGGAAAACTAAACGAATCGCCGCCGGAGAACGGGATTGTATCAGAAACTCCCAGAGAGAAGAAAACAAATGATAATGGCGTAGCCAAGGTTAAAATTGGGAATGGAGCAGCAGAAGCAAACCTGGAGAACGGCGACGACGACGTCTTTTTTACTCCAATGGCTCCCCCGGAAGAGTCGGAGCACGTGAAATTAGCCGTTACGCCCAAATTAACAGAAGAGGCGGAACCAGGGATCCTCCAACCTCATGCAAAGCTCCCGAAGCCCGAGGCACCGCCTGGCCTTCATGACCCTCCTCCTCCTCCTTCCCCAAACGACGACGTTTTGGACGACAGCCAGAAATTCGGCGTGGACATGCCGGCGATAGGGAAGCTCATCCGGAGGAGAAGCAACGATCTCTCCTCGGCGTTCCTGAAGAAGCTGTCGTCGCTCAAGGACAACAATTTCGCCGACGAGTTTTTGAAGCCGAATGTAACCGAGTTCCATCTCTCCGGCCTCAAGGTGACGGTGAGGCACAAGAGCGAGACGGAGCAGCAAACGCAGAGTCTCAAAGGTCGGATCAGCTTCTTCTCCAGGTCCAATTGCCGGGACTGCACGGCGGTCAGGAGCTTTTTCAAAGAGAAAGGACTCAGATTCGTGGAGATAAACGTCGACGTTTATCCTCAGAGAGAGCAAGAGCTGATCGAGAGGACCGGTACGTCGTCGGTGCCTCAGATTTTCTTCAACGAGAAGCTATTCGGCGGTTTGGTGGCGCTGAATTCGCTGAGGAACAGCGGCGAGTTTGACCAACGGTTGAAGGAAATGATCGGGTCGAAATGCCCCGACGACGCGCCCGCTTCCCCTGTTTACGGGTTTGATGATCTCGAGGAGGAATTGACGGACCAGATGATAGGGATCGTGAGGGTGTTGAGGCTGAGATTGCCGATTCAGGACCGTCTGATGAAGATGAAGATCGTGAAGAACTGCTTCGCCGGCGGCGAGATGGTGGAGGTCCTCATTCAGCAGTTGGACTGTGGCCGTAAACAGGCGGTTGAGATTGGAAGGCAACTGGCTAGGAGGCACTTCATTCATCACGTCTTTGGAGAAAATGAGTTTGAAGATGGAAACCATTTTTATCGATTCCTTGAGCATGAACCATTTATCCCCAAATGCTATAATTTCCGAGGATCCATAAATGACTGTGAGCCCAAGCCTGCAGCTGAAGTTGGCCAAAGGCTCACCAAGATCATGTCAGCTATACTTGAGTCCTATGCCTCTGATGACAGGCACCTACTTGATTACATTGGCATAAGTAACAGTGAGGAATTCCGAAGGTACATAAATTTGGTTCAAGAGCTTCACCGAGTAAACCTTTTTGAACTCTCGCCAAATGAGAGGCTAGCCTTCTTCTTGAACCTGTACAATGCCATGGTCATACATGCAGTTATCAGGGTAGGGCGTCCACAAGGTGTCATTGAAAGGAGATCCTTTTACAATGACTTCCAGTATATAGTTGGAGGTTATTCTTATTCCCTTAGTTACATCAAAAATGGCATCCTTAGAAACAACAGGAGACCTCCTTATTCCCTAGTCAAGCCATTTGGCACTGGAGACAGCCGCATAGAGCTTGCTTGTGCTAAAGTGAATCCAATAATCCACTTTGGACTGTGCAATGGGACAAGGTCAAGCCCGACAGTAAGGTTCTTCTCACCCCAAGTAATCGAAGCTGAATTAAGATCTGCAGCAAGGGAGTTCTTTAAGAGTGGTGGAATGGAGGTGAACTTGGAGAAGAGGACTGTGTATCTCACCCAAATCATCAAATGGTTCAATAATGATTTTGGACAAGATAAAGACATTTTAGAGTGGATCCTGAATTACTTGGACCCAACTAGAGCAGGTCTTTTGACACATCTGTTGGGTGATGGAGGACCTATACATATTTCTTACCAGAACTATGATTGGTCCATGAACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DEP DUF547 Glutaredoxin

Protein Analysis

662

Amino Acids

75.02

Weight (kDa)

6.12

Isoelectric Point (pI)

47.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 199 - 256 9.4e-15 Glutaredoxin
DEP PF00610 318 - 385 3.5e-19 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
DUF547 PF04784 464 - 589 3.2e-35 Protein of unknown function, DUF547
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014231)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11920
fragaria_vesca FvH4_4g36430
malus_domestica MD13G1009300.v1.1 MD16G1007300.v1.1
prunus_persica Prupe.1G343400_v2.0.a1
pyrus_communis pycom13g00790 pycom16g00690
rosa_chinensis RchiOBHm_Chr4g0446191
rosa_laevigata RLG00000005684
rosa_multiflora Rmu_sc0009254.1_g000004
rosa_roxburghii Rroxscaffold_5G00386580
rosa_rugosa Rorug04G0368300
rosa_samantha Rh4AG430300 Rh4BG439600 Rh4CG457000 Rh4DG438200
rosa_wichuraiana Rw4G036750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 176, 730
AatII GACGTC 1 cut(s) 180
Acc36I ACCTGC 1 cut(s) 1898
AccB1I GGYRCC 3 cut(s) 304, 739, 1299
AccI GTMKAC 1 cut(s) 684
AccII CGCG 1 cut(s) 863
AccIII TCCGGA 1 cut(s) 411
AcoI YGGCCR 2 cut(s) 1048, 1240
AcsI RAATTY 4 cut(s) 374, 790, 1337, 1354
AcuI CTGAAG 2 cut(s) 467, 1254
AcvI CACGTG 1 cut(s) 220
AcyI GRCGYC 2 cut(s) 177, 1471
AdeI CACNNNGTG 1 cut(s) 1481
AfaI GTAC 3 cut(s) 730, 1349, 1433
AfiI CCNNNNNNNGG 5 cut(s) 65, 398, 618, 881, 1057
AgeI ACCGGT 1 cut(s) 725
AjiI CACGTC 1 cut(s) 1108
AjnI CCWGG 4 cut(s) 156, 262, 310, 605
AloI GAACNNNNNNTCC 4 cut(s) 252, 284, 1158, 1190
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 4 cut(s) 551, 584, 1579, 1617
Ama87I CYCGRG 3 cut(s) 8, 299, 896
Aor13HI TCCGGA 1 cut(s) 411
AoxI GGCC 4 cut(s) 313, 526, 1048, 1240
ApeKI GCWGC 4 cut(s) 143, 565, 1229, 1754
ApoI RAATTY 4 cut(s) 374, 790, 1337, 1354
ArsI GACNNNNNNTTYG 4 cut(s) 461, 493, 562, 594
AsiGI ACCGGT 1 cut(s) 725
Asp700I GAANNNNTTC 2 cut(s) 767, 998
AspLEI GCGC 2 cut(s) 787, 865
AspS9I GGNCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
AsuC2I CCSGG 2 cut(s) 203, 620
AsuHPI GGTGA 9 cut(s) 16, 547, 553, 1243, 1364, 1713, 1801, 1810, 1943
AsuNHI GCTAGC 1 cut(s) 1411
AvaI CYCGRG 3 cut(s) 8, 299, 896
AvaII GGWCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
BalI TGGCCA 1 cut(s) 1242
BamHI GGATCC 3 cut(s) 267, 1199, 1878
BanI GGYRCC 3 cut(s) 304, 739, 1299
BanII GRGCYC 1 cut(s) 1221
BbrPI CACGTG 1 cut(s) 220
Bbv12I GWGCWC 1 cut(s) 219
BbvCI CCTCAGC 1 cut(s) 797
BbvI GCAGC 4 cut(s) 155, 577, 1241, 1766
BccI CCATC 4 cut(s) 525, 1009, 1127, 1928
BceAI ACGGC 4 cut(s) 181, 215, 645, 1035
BciT130I CCWGG 4 cut(s) 158, 264, 312, 607
BcnI CCSGG 2 cut(s) 203, 620
BcoDI GTCTC 4 cut(s) 551, 584, 1579, 1617
BfaI CTAG 4 cut(s) 1086, 1412, 1601, 1902
BfmI CTRYAG 2 cut(s) 1227, 1752
BfoI RGCGCY 1 cut(s) 788
BfuAI ACCTGC 1 cut(s) 1898
BglII AGATCT 1 cut(s) 1748
BisI GCNGC 8 cut(s) 56, 144, 566, 808, 1009, 1230, 1630, 1755
BlsI GCNGC 8 cut(s) 57, 145, 567, 809, 1010, 1231, 1631, 1756
Bme1390I CCNGG 6 cut(s) 158, 203, 264, 312, 607, 620
Bme18I GGWCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
BmeT110I CYCGRG 3 cut(s) 8, 299, 896
BmgBI CACGTC 1 cut(s) 1108
BmgT120I GGNCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
BmiI GGNNCC 9 cut(s) 198, 261, 269, 306, 741, 1201, 1301, 1880, 1896
BmrFI CCNGG 6 cut(s) 158, 203, 264, 312, 607, 620
BmsI GCATC 1 cut(s) 1575
BmtI GCTAGC 1 cut(s) 1415
BpmI CTGGAG 3 cut(s) 179, 589, 1641
Bpu10I CCTNAGC 1 cut(s) 797
BpuEI CTTGAG 4 cut(s) 449, 515, 1178, 1295
BpuMI CCSGG 2 cut(s) 203, 620
Bsa29I ATCGAT 1 cut(s) 1150
BsaAI YACGTR 1 cut(s) 220
BsaBI GATNNNNATC 2 cut(s) 926, 983
BsaHI GRCGYC 2 cut(s) 177, 1471
BsaI GGTCTC 1 cut(s) 1579
BsaJI CCNNGG 7 cut(s) 120, 201, 263, 300, 435, 1195, 1440
BsaWI WCCGGW 3 cut(s) 35, 411, 725
BsaXI ACNNNNNCTCC 2 cut(s) 416, 446
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 398, 618, 881, 1057
Bse118I RCCGGY 3 cut(s) 391, 725, 1004
Bse1I ACTGG 3 cut(s) 1086, 1516, 1624
Bse3DI GCAATG 1 cut(s) 1690
Bse8I GATNNNNATC 2 cut(s) 926, 983
BseAI TCCGGA 1 cut(s) 411
BseBI CCWGG 4 cut(s) 158, 264, 312, 607
BseCI ATCGAT 1 cut(s) 1150
BseDI CCNNGG 7 cut(s) 120, 201, 263, 300, 435, 1195, 1440
BseGI GGATG 2 cut(s) 408, 1566
BseJI GATNNNNATC 2 cut(s) 926, 983
BseLI CCNNNNNNNGG 5 cut(s) 65, 398, 618, 881, 1057
BseMI GCAATG 1 cut(s) 1690
BseMII CTCAG 5 cut(s) 676, 710, 758, 788, 938
BseNI ACTGG 3 cut(s) 1086, 1516, 1624
BseRI GAGGAG 6 cut(s) 318, 321, 324, 424, 430, 914
BseXI GCAGC 4 cut(s) 155, 577, 1241, 1766
BsgI GTGCAG 1 cut(s) 610
Bsh1236I CGCG 1 cut(s) 863
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 4 cut(s) 315, 528, 1050, 1242
BshNI GGYRCC 3 cut(s) 304, 739, 1299
BshTI ACCGGT 1 cut(s) 725
BshVI ATCGAT 1 cut(s) 1150
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 219
BsiHKCI CYCGRG 3 cut(s) 8, 299, 896
BsiSI CCGG 9 cut(s) 36, 59, 203, 392, 412, 525, 619, 726, 1005
BslFI GGGAC 2 cut(s) 635, 1702
BslI CCNNNNNNNGG 5 cut(s) 65, 398, 618, 881, 1057
BsmAI GTCTC 4 cut(s) 551, 584, 1579, 1617
BsmBI CGTCTC 1 cut(s) 551
BsmFI GGGAC 2 cut(s) 635, 1702
BsnI GGCC 4 cut(s) 315, 528, 1050, 1242
Bso31I GGTCTC 1 cut(s) 1579
BsoBI CYCGRG 3 cut(s) 8, 299, 896
Bsp1286I GDGCHC 2 cut(s) 219, 1221
Bsp13I TCCGGA 1 cut(s) 411
Bsp1407I TGTACA 1 cut(s) 1431
Bsp19I CCATGG 1 cut(s) 1440
BspANI GGCC 4 cut(s) 315, 528, 1050, 1242
BspCNI CTCAG 5 cut(s) 675, 709, 757, 789, 939
BspDI ATCGAT 1 cut(s) 1150
BspEI TCCGGA 1 cut(s) 411
BspFNI CGCG 1 cut(s) 863
BspHI TCATGA 1 cut(s) 319
BspLI GGNNCC 9 cut(s) 198, 261, 269, 306, 741, 1201, 1301, 1880, 1896
BspMAI CTGCAG 2 cut(s) 1231, 1756
BspMI ACCTGC 1 cut(s) 1898
BspOI GCTAGC 1 cut(s) 1415
BspT107I GGYRCC 3 cut(s) 304, 739, 1299
BspTNI GGTCTC 1 cut(s) 1579
BsrDI GCAATG 1 cut(s) 1690
BsrFI RCCGGY 3 cut(s) 391, 725, 1004
BsrGI TGTACA 1 cut(s) 1431
BsrI ACTGG 3 cut(s) 1086, 1516, 1624
BssAI RCCGGY 3 cut(s) 391, 725, 1004
BssECI CCNNGG 7 cut(s) 120, 201, 263, 300, 435, 1195, 1440
BssNI GRCGYC 2 cut(s) 177, 1471
BssT1I CCWWGG 2 cut(s) 120, 1440
Bst2UI CCWGG 4 cut(s) 158, 264, 312, 607
Bst4CI ACNGT 9 cut(s) 541, 825, 968, 1046, 1214, 1331, 1680, 1708, 1810
Bst6I CTCTTC 3 cut(s) 201, 246, 1796
BstACI GRCGYC 2 cut(s) 177, 1471
BstAUI TGTACA 1 cut(s) 1431
BstBAI YACGTR 1 cut(s) 220
BstC8I GCNNGC 6 cut(s) 393, 867, 1006, 1227, 1413, 1641
BstDEI CTNAG 7 cut(s) 662, 696, 744, 797, 947, 1547, 1571
BstDSI CCRYGG 1 cut(s) 1440
BstF5I GGATG 2 cut(s) 408, 1566
BstFNI CGCG 1 cut(s) 863
BstH2I RGCGCY 1 cut(s) 788
BstHHI GCGC 2 cut(s) 787, 865
BstMAI GTCTC 4 cut(s) 551, 584, 1579, 1617
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 8 cut(s) 149, 295, 460, 571, 624, 793, 952, 1005
BstNI CCWGG 4 cut(s) 158, 264, 312, 607
BstNSI RCATGY 2 cut(s) 391, 1454
BstSCI CCNGG 6 cut(s) 156, 201, 262, 310, 605, 618
BstSFI CTRYAG 2 cut(s) 1227, 1752
BstUI CGCG 1 cut(s) 863
BstV1I GCAGC 4 cut(s) 155, 577, 1241, 1766
BstX2I RGATCY 6 cut(s) 4, 267, 1199, 1496, 1748, 1878
BstYI RGATCY 6 cut(s) 4, 267, 1199, 1496, 1748, 1878
Bsu15I ATCGAT 1 cut(s) 1150
BsuRI GGCC 4 cut(s) 315, 528, 1050, 1242
BsuTUI ATCGAT 1 cut(s) 1150
BtgI CCRYGG 1 cut(s) 1440
BtrI CACGTC 1 cut(s) 1108
BtsCI GGATG 2 cut(s) 408, 1566
BtsIMutI CAGTG 2 cut(s) 1336, 1617
BveI ACCTGC 1 cut(s) 1898
Cac8I GCNNGC 6 cut(s) 393, 867, 1006, 1227, 1413, 1641
CciI TCATGA 1 cut(s) 319
CfoI GCGC 2 cut(s) 787, 865
Cfr10I RCCGGY 3 cut(s) 391, 725, 1004
Cfr13I GGNCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
ClaI ATCGAT 1 cut(s) 1150
CseI GACGC 2 cut(s) 869, 1460
Csp6I GTAC 3 cut(s) 729, 1348, 1432
CspAI ACCGGT 1 cut(s) 725
CviAII CATG 8 cut(s) 281, 320, 388, 1163, 1261, 1441, 1451, 1978
CviQI GTAC 3 cut(s) 729, 1348, 1432
DdeI CTNAG 7 cut(s) 662, 696, 744, 797, 947, 1547, 1571
DraIII CACNNNGTG 1 cut(s) 1481
DrdI GACNNNNNNGTC 2 cut(s) 176, 730
DseDI GACNNNNNNGTC 2 cut(s) 176, 730
EaeI YGGCCR 2 cut(s) 1048, 1240
Eam1104I CTCTTC 3 cut(s) 201, 246, 1796
EarI CTCTTC 3 cut(s) 201, 246, 1796
EciI GGCGGA 1 cut(s) 272
Eco130I CCWWGG 2 cut(s) 120, 1440
Eco24I GRGCYC 1 cut(s) 1221
Eco31I GGTCTC 1 cut(s) 1579
Eco47I GGWCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
Eco57I CTGAAG 2 cut(s) 467, 1254
Eco72I CACGTG 1 cut(s) 220
Eco88I CYCGRG 3 cut(s) 8, 299, 896
EcoO109I RGGNCCY 2 cut(s) 1024, 1940
EcoRI GAATTC 2 cut(s) 790, 1337
EcoRII CCWGG 4 cut(s) 156, 262, 310, 605
EcoT14I CCWWGG 2 cut(s) 120, 1440
EcoT38I GRGCYC 1 cut(s) 1221
ErhI CCWWGG 2 cut(s) 120, 1440
Esp3I CGTCTC 1 cut(s) 551
FaeI CATG 8 cut(s) 284, 323, 391, 1166, 1264, 1444, 1454, 1981
FalI AAGNNNNNCTT 2 cut(s) 983, 1015
FaqI GGGAC 2 cut(s) 635, 1702
FatI CATG 8 cut(s) 280, 319, 387, 1162, 1260, 1440, 1450, 1977
FauI CCCGC 1 cut(s) 874
FblI GTMKAC 1 cut(s) 684
Fnu4HI GCNGC 8 cut(s) 56, 144, 566, 808, 1009, 1230, 1630, 1755
FokI GGATG 2 cut(s) 395, 1553
FriOI GRGCYC 1 cut(s) 1221
Fsp4HI GCNGC 8 cut(s) 56, 144, 566, 808, 1009, 1230, 1630, 1755
FspBI CTAG 4 cut(s) 1086, 1412, 1601, 1902
GlaI GCGC 2 cut(s) 786, 864
GluI GCNGC 8 cut(s) 56, 144, 566, 808, 1009, 1230, 1630, 1755
GsuI CTGGAG 3 cut(s) 179, 589, 1641
HaeII RGCGCY 1 cut(s) 788
HaeIII GGCC 4 cut(s) 315, 528, 1050, 1242
HapII CCGG 9 cut(s) 36, 59, 203, 392, 412, 525, 619, 726, 1005
HgaI GACGC 2 cut(s) 869, 1460
HhaI GCGC 2 cut(s) 787, 865
Hin1I GRCGYC 2 cut(s) 177, 1471
Hin1II CATG 8 cut(s) 284, 323, 391, 1166, 1264, 1444, 1454, 1981
Hin6I GCGC 2 cut(s) 785, 863
HinP1I GCGC 2 cut(s) 785, 863
HincII GTYRAC 1 cut(s) 685
HindII GTYRAC 1 cut(s) 685
HinfI GANTC 9 cut(s) 50, 209, 577, 660, 666, 958, 1152, 1277, 1657
HpaII CCGG 9 cut(s) 36, 59, 203, 392, 412, 525, 619, 726, 1005
HphI GGTGA 9 cut(s) 16, 547, 553, 1243, 1364, 1713, 1801, 1810, 1943
Hpy166II GTNNAC 7 cut(s) 385, 685, 880, 1055, 1381, 1475, 1792
Hpy8I GTNNAC 7 cut(s) 385, 685, 880, 1055, 1381, 1475, 1792
HpyAV CCTTC 6 cut(s) 326, 348, 823, 1068, 1338, 1426
HpyCH4III ACNGT 9 cut(s) 541, 825, 968, 1046, 1214, 1331, 1680, 1708, 1810
HpyCH4IV ACGT 7 cut(s) 177, 219, 354, 681, 687, 731, 1107
HpyCH4V TGCA 6 cut(s) 284, 627, 1229, 1454, 1683, 1754
HpyF10VI GCNNNNNNNGC 8 cut(s) 149, 295, 460, 571, 624, 793, 952, 1005
HpyF3I CTNAG 7 cut(s) 662, 696, 744, 797, 947, 1547, 1571
HpySE526I ACGT 7 cut(s) 177, 219, 354, 681, 687, 731, 1107
Hsp92I GRCGYC 2 cut(s) 177, 1471
Hsp92II CATG 8 cut(s) 284, 323, 391, 1166, 1264, 1444, 1454, 1981
HspAI GCGC 2 cut(s) 785, 863
Kpn2I TCCGGA 1 cut(s) 411
KroI GCCGGC 2 cut(s) 391, 1004
KroNI GCCGGC 2 cut(s) 393, 1006
LmnI GCTCC 6 cut(s) 140, 202, 214, 294, 562, 639
Lsp1109I GCAGC 4 cut(s) 155, 577, 1241, 1766
LweI GCATC 1 cut(s) 1575
MaeI CTAG 4 cut(s) 1086, 1412, 1601, 1902
MaeII ACGT 7 cut(s) 177, 219, 354, 681, 687, 731, 1107
MaeIII GTNAC 6 cut(s) 16, 232, 505, 535, 1325, 1550
MfeI CAATTG 1 cut(s) 613
MflI RGATCY 6 cut(s) 4, 267, 1199, 1496, 1748, 1878
MhlI GDGCHC 2 cut(s) 219, 1221
MlsI TGGCCA 1 cut(s) 1242
MluNI TGGCCA 1 cut(s) 1242
MlyI GAGTC 4 cut(s) 218, 586, 654, 1286
MmeI TCCRAC 5 cut(s) 192, 298, 569, 1020, 1507
Mox20I TGGCCA 1 cut(s) 1242
MreI CGCCGGCG 1 cut(s) 1004
MroI TCCGGA 1 cut(s) 411
MroNI GCCGGC 2 cut(s) 391, 1004
MroXI GAANNNNTTC 2 cut(s) 767, 998
MscI TGGCCA 1 cut(s) 1242
MseI TTAA 4 cut(s) 126, 245, 1745, 1770
Msp20I TGGCCA 1 cut(s) 1242
MspA1I CMGCKG 2 cut(s) 807, 1232
MspI CCGG 9 cut(s) 36, 59, 203, 392, 412, 525, 619, 726, 1005
MspR9I CCNGG 6 cut(s) 158, 203, 264, 312, 607, 620
MunI CAATTG 1 cut(s) 613
MvaI CCWGG 4 cut(s) 158, 264, 312, 607
MvnI CGCG 1 cut(s) 863
MwoI GCNNNNNNNGC 8 cut(s) 149, 295, 460, 571, 624, 793, 952, 1005
NaeI GCCGGC 2 cut(s) 393, 1006
NciI CCSGG 2 cut(s) 203, 620
NcoI CCATGG 1 cut(s) 1440
NgoMIV GCCGGC 2 cut(s) 391, 1004
NheI GCTAGC 1 cut(s) 1411
NlaIII CATG 8 cut(s) 284, 323, 391, 1166, 1264, 1444, 1454, 1981
NlaIV GGNNCC 9 cut(s) 198, 261, 269, 306, 741, 1201, 1301, 1880, 1896
NmeAIII GCCGAG 1 cut(s) 416
NmuCI GTSAC 1 cut(s) 535
NspI RCATGY 2 cut(s) 391, 1454
PaeR7I CTCGAG 1 cut(s) 896
PagI TCATGA 1 cut(s) 319
PcsI WCGNNNNNNNCGW 3 cut(s) 171, 360, 1008
PdiI GCCGGC 2 cut(s) 393, 1006
PdmI GAANNNNTTC 2 cut(s) 767, 998
PfeI GAWTC 5 cut(s) 50, 666, 958, 1152, 1657
PflFI GACNNNGTC 2 cut(s) 176, 1693
PinAI ACCGGT 1 cut(s) 725
PkrI GCNGC 8 cut(s) 57, 145, 567, 809, 1010, 1231, 1631, 1756
PleI GAGTC 4 cut(s) 217, 585, 654, 1285
PmaCI CACGTG 1 cut(s) 220
PmlI CACGTG 1 cut(s) 220
PpsI GAGTC 4 cut(s) 217, 585, 654, 1285
Ppu21I YACGTR 1 cut(s) 220
PpuMI RGGWCCY 2 cut(s) 1024, 1940
Psp5II RGGWCCY 2 cut(s) 1024, 1940
Psp6I CCWGG 4 cut(s) 156, 262, 310, 605
PspCI CACGTG 1 cut(s) 220
PspGI CCWGG 4 cut(s) 156, 262, 310, 605
PspN4I GGNNCC 9 cut(s) 198, 261, 269, 306, 741, 1201, 1301, 1880, 1896
PspPI GGNCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
PspPPI RGGWCCY 2 cut(s) 1024, 1940
PstI CTGCAG 2 cut(s) 1231, 1756
PsuI RGATCY 6 cut(s) 4, 267, 1199, 1496, 1748, 1878
PsyI GACNNNGTC 2 cut(s) 176, 1693
PvuII CAGCTG 1 cut(s) 1232
RsaI GTAC 3 cut(s) 730, 1349, 1433
RsaNI GTAC 3 cut(s) 729, 1348, 1432
SalI GTCGAC 1 cut(s) 683
SaqAI TTAA 4 cut(s) 126, 245, 1745, 1770
SatI GCNGC 8 cut(s) 56, 144, 566, 808, 1009, 1230, 1630, 1755
Sau96I GGNCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
SchI GAGTC 4 cut(s) 218, 586, 654, 1286
ScrFI CCNGG 6 cut(s) 158, 203, 264, 312, 607, 620
SduI GDGCHC 2 cut(s) 219, 1221
SfaNI GCATC 1 cut(s) 1575
SfcI CTRYAG 2 cut(s) 1227, 1752
Sfr274I CTCGAG 1 cut(s) 896
SgrAI CRCCGGYG 1 cut(s) 1004
SgrDI CGTCGACG 1 cut(s) 683
SinI GGWCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
SlaI CTCGAG 1 cut(s) 896
SmlI CTYRAG 5 cut(s) 464, 530, 896, 1157, 1274
SmoI CTYRAG 5 cut(s) 464, 530, 896, 1157, 1274
SspMI CTAG 4 cut(s) 1086, 1412, 1601, 1902
StyD4I CCNGG 6 cut(s) 156, 201, 262, 310, 605, 618
StyI CCWWGG 2 cut(s) 120, 1440
TaaI ACNGT 9 cut(s) 541, 825, 968, 1046, 1214, 1331, 1680, 1708, 1810
TaiI ACGT 7 cut(s) 180, 222, 357, 684, 690, 734, 1110
TaqI TCGA 6 cut(s) 684, 717, 845, 897, 1150, 1734
TatI WGTACW 1 cut(s) 1431
TauI GCSGC 4 cut(s) 58, 810, 1011, 1632
TfiI GAWTC 5 cut(s) 50, 666, 958, 1152, 1657
Tru1I TTAA 4 cut(s) 126, 245, 1745, 1770
Tru9I TTAA 4 cut(s) 126, 245, 1745, 1770
TscAI CASTG 2 cut(s) 1336, 1624
TseFI GTSAC 1 cut(s) 535
TseI GCWGC 4 cut(s) 143, 565, 1229, 1754
Tsp45I GTSAC 1 cut(s) 535
TspDTI ATGAA 6 cut(s) 308, 989, 995, 1087, 1091, 1179
TspGWI ACGGA 2 cut(s) 575, 926
TspRI CASTG 2 cut(s) 1336, 1624
Tth111I GACNNNGTC 2 cut(s) 176, 1693
VpaK11BI GGWCC 8 cut(s) 609, 723, 913, 964, 1024, 1894, 1940, 1974
XapI RAATTY 4 cut(s) 374, 790, 1337, 1354
XceI RCATGY 2 cut(s) 391, 1454
XcmI CCANNNNNNNNNTGG 1 cut(s) 1523
XhoI CTCGAG 1 cut(s) 896
XmiI GTMKAC 1 cut(s) 684
XmnI GAANNNNTTC 2 cut(s) 767, 998
XspI CTAG 4 cut(s) 1086, 1412, 1601, 1902
ZraI GACGTC 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.